AlfalfaGEDB | MS.gene068609

M. sativa cultivar XinJiangDaYe / MS.gene068609

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02701.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene068609.t1	XP_003612994.1	93.7	302	8	4	1	299	43	336	7.80E-130	473.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene068609.t1	Q9LSL6	36.6	314	146	13	1	299	41	316	2.1e-35	151.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene068609.t1	G7KGJ7	93.7	302	8	4	1	299	43	336	5.6e-130	473.4

TFs/TRs:

Gene ID	Type	Classification
MS.gene068609.t1	TF	C2C2-Dof

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050137	MS.gene068609	0.815723	7.99E-52	-1.69E-46
MS.gene050787	MS.gene068609	0.805209	1.49E-49	-1.69E-46
MS.gene051265	MS.gene068609	0.829512	4.94E-55	-1.69E-46
MS.gene052020	MS.gene068609	0.802808	4.71E-49	-1.69E-46
MS.gene052611	MS.gene068609	0.801685	8.01E-49	-1.69E-46
MS.gene053074	MS.gene068609	0.803754	3.00E-49	-1.69E-46
MS.gene053166	MS.gene068609	0.80599	1.02E-49	-1.69E-46
MS.gene053184	MS.gene068609	0.803761	2.99E-49	-1.69E-46
MS.gene054433	MS.gene068609	0.835157	1.98E-56	-1.69E-46
MS.gene054559	MS.gene068609	0.810621	1.05E-50	-1.69E-46
MS.gene05468	MS.gene068609	0.817513	3.17E-52	-1.69E-46
MS.gene055356	MS.gene068609	0.845864	3.11E-59	-1.69E-46
MS.gene055357	MS.gene068609	0.830715	2.51E-55	-1.69E-46
MS.gene055358	MS.gene068609	0.876878	9.83E-69	-1.69E-46
MS.gene056173	MS.gene068609	0.809328	2.00E-50	-1.69E-46
MS.gene058168	MS.gene068609	0.806018	1.01E-49	-1.69E-46
MS.gene059128	MS.gene068609	0.806797	6.91E-50	-1.69E-46
MS.gene059607	MS.gene068609	0.804065	2.58E-49	-1.69E-46
MS.gene059609	MS.gene068609	0.824235	9.01E-54	-1.69E-46
MS.gene060803	MS.gene068609	0.828512	8.63E-55	-1.69E-46
MS.gene061114	MS.gene068609	-0.812307	4.53E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene068609.t1	MTR_5g031440	92.384	302	12	4	1	299	43	336	0.0	520
MS.gene068609.t1	MTR_8g068210	48.338	331	115	11	1	299	32	338	3.64e-78	241
MS.gene068609.t1	MTR_8g479350	71.250	80	23	0	1	80	68	147	2.30e-36	133
MS.gene068609.t1	MTR_2g096740	60.000	95	38	0	1	95	62	156	1.18e-35	130
MS.gene068609.t1	MTR_2g096740	60.000	95	38	0	1	95	77	171	1.25e-35	130
MS.gene068609.t1	MTR_4g063780	65.169	89	22	2	1	80	75	163	5.38e-34	127
MS.gene068609.t1	MTR_8g027295	44.848	165	71	6	1	149	24	184	1.27e-32	121
MS.gene068609.t1	MTR_4g088580	68.000	75	24	0	2	76	56	130	1.40e-32	124
MS.gene068609.t1	MTR_7g059400	59.091	110	31	3	2	102	77	181	5.89e-32	121
MS.gene068609.t1	MTR_7g024670	80.000	60	12	0	2	61	78	137	7.26e-31	119
MS.gene068609.t1	MTR_4g022370	81.818	55	10	0	1	55	82	136	3.94e-30	117
MS.gene068609.t1	MTR_3g090430	70.588	68	17	1	3	67	53	120	9.60e-30	115
MS.gene068609.t1	MTR_4g461080	86.792	53	7	0	1	53	29	81	1.11e-29	114
MS.gene068609.t1	MTR_2g093220	83.636	55	9	0	1	55	40	94	1.36e-29	114
MS.gene068609.t1	MTR_4g109980	88.235	51	6	0	1	51	40	90	2.56e-29	114
MS.gene068609.t1	MTR_2g014060	90.196	51	5	0	2	52	26	76	7.66e-29	113
MS.gene068609.t1	MTR_3g091820	80.000	55	11	0	1	55	43	97	9.20e-29	112
MS.gene068609.t1	MTR_8g015840	74.603	63	15	1	1	63	20	81	1.41e-28	109
MS.gene068609.t1	MTR_1g056810	84.906	53	8	0	3	55	14	66	1.70e-28	111
MS.gene068609.t1	MTR_3g077750	84.314	51	8	0	1	51	61	111	4.42e-28	111
MS.gene068609.t1	MTR_1g077600	78.182	55	12	0	1	55	43	97	1.13e-27	108
MS.gene068609.t1	MTR_1g077600	78.182	55	12	0	1	55	43	97	1.21e-27	108
MS.gene068609.t1	MTR_2g014170	83.673	49	8	0	1	49	45	93	1.06e-26	106
MS.gene068609.t1	MTR_8g079060	74.545	55	14	0	1	55	29	83	1.31e-26	104
MS.gene068609.t1	MTR_2g059540	83.673	49	8	0	1	49	31	79	1.36e-26	103
MS.gene068609.t1	MTR_4g089095	73.684	57	14	1	1	57	50	105	6.88e-26	104
MS.gene068609.t1	MTR_4g089095	73.684	57	14	1	1	57	16	71	7.83e-26	103
MS.gene068609.t1	MTR_2g013370	71.930	57	15	1	1	57	46	101	1.47e-25	103
MS.gene068609.t1	MTR_6g012450	72.222	54	15	0	1	54	136	189	8.05e-24	101
MS.gene068609.t1	MTR_4g082060	64.407	59	21	0	1	59	122	180	1.25e-23	100
MS.gene068609.t1	MTR_2g016030	70.370	54	16	0	1	54	47	100	1.32e-23	94.7
MS.gene068609.t1	MTR_7g010950	70.370	54	16	0	1	54	135	188	1.43e-23	100
MS.gene068609.t1	MTR_8g044220	48.936	94	37	2	1	83	118	211	2.36e-23	99.4
MS.gene068609.t1	MTR_7g086780	67.241	58	19	0	1	58	99	156	2.72e-23	99.4
MS.gene068609.t1	MTR_3g435480	66.102	59	20	0	1	59	136	194	5.19e-23	98.6
MS.gene068609.t1	MTR_6g027450	62.069	58	22	0	1	58	89	146	8.26e-23	96.7
MS.gene068609.t1	MTR_6g027460	62.069	58	22	0	1	58	96	153	5.51e-22	94.7
MS.gene068609.t1	MTR_5g041420	68.519	54	17	0	1	54	138	191	1.02e-21	93.6
MS.gene068609.t1	MTR_5g041530	68.519	54	17	0	1	54	140	193	1.84e-21	93.6
MS.gene068609.t1	MTR_5g041380	57.576	66	28	0	1	66	127	192	2.75e-20	90.1
MS.gene068609.t1	MTR_5g041400	64.815	54	19	0	1	54	119	172	4.37e-20	89.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene068609.t1	AT5G65590	43.791	306	135	16	1	299	41	316	5.01e-63	202
MS.gene068609.t1	AT2G28510	44.937	158	82	3	3	156	50	206	3.11e-33	124
MS.gene068609.t1	AT5G60200	76.562	64	15	0	1	64	55	118	6.20e-33	122
MS.gene068609.t1	AT1G51700	80.000	65	12	1	1	64	33	97	1.24e-32	119
MS.gene068609.t1	AT2G37590	82.456	57	10	0	1	57	89	145	2.25e-32	122
MS.gene068609.t1	AT3G55370	76.562	64	15	0	1	64	76	139	1.43e-31	120
MS.gene068609.t1	AT3G55370	76.562	64	15	0	1	64	76	139	1.83e-31	120
MS.gene068609.t1	AT1G07640	85.455	55	8	0	1	55	21	75	2.39e-31	118
MS.gene068609.t1	AT3G55370	76.562	64	15	0	1	64	121	184	2.70e-31	120
MS.gene068609.t1	AT1G07640	85.455	55	8	0	1	55	77	131	3.30e-31	119
MS.gene068609.t1	AT1G07640	85.455	55	8	0	1	55	85	139	4.46e-31	119
MS.gene068609.t1	AT3G21270	88.679	53	6	0	1	53	29	81	4.65e-31	115
MS.gene068609.t1	AT3G52440	61.053	95	26	2	3	97	27	110	5.44e-31	116
MS.gene068609.t1	AT3G52440	61.053	95	26	2	3	97	46	129	9.92e-31	116
MS.gene068609.t1	AT5G02460	83.636	55	9	0	1	55	95	149	2.09e-30	118
MS.gene068609.t1	AT2G28810	84.615	52	8	0	1	52	77	128	2.40e-30	117
MS.gene068609.t1	AT2G28810	84.615	52	8	0	1	52	94	145	3.65e-30	116
MS.gene068609.t1	AT5G60850	79.310	58	12	0	1	58	51	108	3.93e-30	115
MS.gene068609.t1	AT4G38000	66.250	80	26	1	1	79	41	120	2.38e-29	112
MS.gene068609.t1	AT1G28310	78.947	57	12	0	1	57	27	83	2.62e-29	114
MS.gene068609.t1	AT1G28310	78.947	57	12	0	1	57	51	107	4.39e-29	114
MS.gene068609.t1	AT3G45610	72.581	62	17	0	1	62	40	101	4.41e-29	111
MS.gene068609.t1	AT3G61850	52.679	112	42	4	1	111	74	175	1.09e-28	112
MS.gene068609.t1	AT3G61850	52.679	112	42	4	1	111	62	163	1.10e-28	111
MS.gene068609.t1	AT3G61850	52.679	112	42	4	1	111	62	163	1.10e-28	111
MS.gene068609.t1	AT4G21050	73.333	60	16	0	3	62	26	85	1.28e-28	109
MS.gene068609.t1	AT3G61850	52.679	112	42	4	1	111	62	163	1.60e-28	112
MS.gene068609.t1	AT1G21340	70.968	62	18	0	3	64	40	101	1.82e-28	110
MS.gene068609.t1	AT3G61850	52.679	112	42	4	1	111	74	175	1.90e-28	112
MS.gene068609.t1	AT4G24060	78.182	55	12	0	1	55	53	107	5.52e-27	108
MS.gene068609.t1	AT5G62940	84.000	50	8	0	2	51	74	123	5.87e-27	108
MS.gene068609.t1	AT4G00940	79.630	54	11	0	3	56	70	123	7.51e-27	107
MS.gene068609.t1	AT4G00940	79.630	54	11	0	3	56	70	123	7.51e-27	107
MS.gene068609.t1	AT4G00940	79.630	54	11	0	3	56	70	123	7.51e-27	107
MS.gene068609.t1	AT3G50410	74.545	55	14	0	1	55	30	84	2.21e-26	104
MS.gene068609.t1	AT5G66940	64.516	62	22	0	1	62	32	93	1.52e-25	101
MS.gene068609.t1	AT2G46590	81.250	48	9	0	1	48	68	115	2.12e-24	101
MS.gene068609.t1	AT2G46590	81.250	48	9	0	1	48	80	127	2.49e-24	101
MS.gene068609.t1	AT1G64620	78.000	50	11	0	1	50	49	98	3.13e-24	100
MS.gene068609.t1	AT3G47500	55.422	83	33	1	1	83	110	188	1.76e-23	100
MS.gene068609.t1	AT2G34140	70.370	54	16	0	1	54	58	111	2.86e-23	94.4
MS.gene068609.t1	AT4G21040	66.667	63	20	1	3	64	27	89	2.98e-23	95.9
MS.gene068609.t1	AT1G29160	70.370	54	16	0	1	54	62	115	3.31e-23	94.4
MS.gene068609.t1	AT5G62430	70.370	54	16	0	1	54	54	107	3.64e-23	97.1
MS.gene068609.t1	AT1G69570	66.102	59	20	0	1	59	132	190	4.69e-23	98.2
MS.gene068609.t1	AT5G39660	57.746	71	30	0	1	71	138	208	6.00e-23	98.6
MS.gene068609.t1	AT5G39660	57.746	71	30	0	1	71	138	208	6.00e-23	98.6
MS.gene068609.t1	AT5G39660	57.746	71	30	0	1	71	138	208	6.00e-23	98.6
MS.gene068609.t1	AT1G26790	52.381	84	39	1	1	84	111	193	8.98e-23	97.1
MS.gene068609.t1	AT4G21080	65.079	63	21	1	3	64	27	89	1.27e-22	94.7
MS.gene068609.t1	AT1G47655	71.429	49	14	0	1	49	29	77	2.01e-22	93.2
MS.gene068609.t1	AT4G21030	50.000	64	30	1	3	64	23	86	4.36e-14	70.1

Find 40 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCAAGATTCTGAAACAAAA+TGG	0.209045	5.1:-21620419	None:intergenic
TTCTCTTTCTTCACCTTCCA+TGG	0.316516	5.1:+21620009	MS.gene068609:CDS
TTATAATTACCTGATGAAAA+AGG	0.326439	5.1:-21620196	None:intergenic
GCAAAACATGTAGAAGATAT+TGG	0.332074	5.1:+21619834	MS.gene068609:CDS
TTTCTCCAAAAGATGAAAAC+TGG	0.363395	5.1:-21620114	None:intergenic
TCTTCTTCTTCAGAGCTTGT+TGG	0.374369	5.1:+21619968	MS.gene068609:CDS
TGGAATGGAGGTGGTGTTCA+TGG	0.438875	5.1:+21620589	MS.gene068609:CDS
TAGGAGTAGTAGAAATTTGA+GGG	0.447158	5.1:-21620084	None:intergenic
TGTAGAAGATATTGGACAAA+AGG	0.447881	5.1:+21619842	MS.gene068609:CDS
ATGGAGGTGGTGTTCATGGT+TGG	0.452930	5.1:+21620593	MS.gene068609:CDS
TGATTATGAAGTTGAAGTCT+TGG	0.460479	5.1:-21620061	None:intergenic
TCAAGATTCTGAAACAAAAT+GGG	0.479207	5.1:-21620418	None:intergenic
TCTTCTTCAGAGCTTGTTGG+TGG	0.480751	5.1:+21619971	MS.gene068609:CDS
TCTGCTATGAATAACTATCA+TGG	0.480809	5.1:+21620142	MS.gene068609:CDS
GTAGCTTCCAGTGCAAGTCT+TGG	0.484387	5.1:-21620306	None:intergenic
ATAGGAGTAGTAGAAATTTG+AGG	0.486036	5.1:-21620085	None:intergenic
CGCAACGTTCCAATCGGTGG+TGG	0.493729	5.1:+21619875	MS.gene068609:CDS
GTGTTGGGAGAGTCACATCT+TGG	0.514485	5.1:-21619761	None:intergenic
CCTACTGCAAGTGGTGGAGC+TGG	0.519120	5.1:+21620547	MS.gene068609:CDS
TTTCTACATCCACCACCGAT+TGG	0.522050	5.1:-21619884	None:intergenic
GGTGGAGCTGGACATGATAG+TGG	0.524755	5.1:+21620559	MS.gene068609:CDS
AATTATAATGGTGCAATACA+AGG	0.531532	5.1:+21620211	MS.gene068609:CDS
GCTTTACGCAACGTTCCAAT+CGG	0.531943	5.1:+21619869	MS.gene068609:CDS
CTATGAACCAAGACTTGCAC+TGG	0.534331	5.1:+21620299	MS.gene068609:CDS
TGGAAGGTGAAGAAAGAGAA+TGG	0.535036	5.1:-21620006	None:intergenic
GATTCTGAAACAAAATGGGT+TGG	0.535817	5.1:-21620414	None:intergenic
GACATGATAGTGGAAGCAAC+TGG	0.536262	5.1:+21620569	MS.gene068609:CDS
GATGAAAACTGGTTATACAT+AGG	0.549549	5.1:-21620103	None:intergenic
TGAAACAAAATGGGTTGGAG+TGG	0.578171	5.1:-21620409	None:intergenic
AGAAGATATTGGACAAAAGG+TGG	0.584366	5.1:+21619845	MS.gene068609:CDS
GATAGTGGAAGCAACTGGAA+TGG	0.593132	5.1:+21620574	MS.gene068609:CDS
ACTACCAAGATGAAAATCCA+TGG	0.598151	5.1:-21620026	None:intergenic
CCAAGATGAAAATCCATGGA+AGG	0.609817	5.1:-21620022	None:intergenic
TTACGCAACGTTCCAATCGG+TGG	0.621443	5.1:+21619872	MS.gene068609:CDS
CCAGCTCCACCACTTGCAGT+AGG	0.633722	5.1:-21620547	None:intergenic
GAGAAGATGCAGCAACTGAG+TGG	0.651408	5.1:+21620488	MS.gene068609:CDS
GGAAGCAACTGGAATGGAGG+TGG	0.653313	5.1:+21620580	MS.gene068609:CDS
GCTGCTACACCTACTGCAAG+TGG	0.675331	5.1:+21620538	MS.gene068609:CDS
AGTGGAAGCAACTGGAATGG+AGG	0.675339	5.1:+21620577	MS.gene068609:CDS
GCTACACCTACTGCAAGTGG+TGG	0.683188	5.1:+21620541	MS.gene068609:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATAATTACCTGATGAAAA+AGG	-	chr5.1:21620199-21620218	None:intergenic	20.0%
!!!	TTTTCATCAGGTAATTATAA+TGG	+	chr5.1:21620199-21620218	MS.gene068609:CDS	20.0%
!	AATTATAATGGTGCAATACA+AGG	+	chr5.1:21620211-21620230	MS.gene068609:CDS	25.0%
!!	CAAAGATTATCTATGCTTTT+TGG	+	chr5.1:21620334-21620353	MS.gene068609:CDS	25.0%
!!	TATAACCAGTTTTCATCTTT+TGG	+	chr5.1:21620109-21620128	MS.gene068609:CDS	25.0%
!!!	TCAAGATTCTGAAACAAAAT+GGG	-	chr5.1:21620421-21620440	None:intergenic	25.0%
	ATAGGAGTAGTAGAAATTTG+AGG	-	chr5.1:21620088-21620107	None:intergenic	30.0%
	GATGAAAACTGGTTATACAT+AGG	-	chr5.1:21620106-21620125	None:intergenic	30.0%
	GCAAAACATGTAGAAGATAT+TGG	+	chr5.1:21619834-21619853	MS.gene068609:CDS	30.0%
	TAGGAGTAGTAGAAATTTGA+GGG	-	chr5.1:21620087-21620106	None:intergenic	30.0%
	TCTGCTATGAATAACTATCA+TGG	+	chr5.1:21620142-21620161	MS.gene068609:CDS	30.0%
	TGATTATGAAGTTGAAGTCT+TGG	-	chr5.1:21620064-21620083	None:intergenic	30.0%
	TGTAGAAGATATTGGACAAA+AGG	+	chr5.1:21619842-21619861	MS.gene068609:CDS	30.0%
	TTTCTCCAAAAGATGAAAAC+TGG	-	chr5.1:21620117-21620136	None:intergenic	30.0%
!	TAGTAGCAGAATTTTGTGTT+GGG	-	chr5.1:21619779-21619798	None:intergenic	30.0%
!!	AGATTATCTATGCTTTTTGG+TGG	+	chr5.1:21620337-21620356	MS.gene068609:CDS	30.0%
!!	ATGAACTATCCTTTTTCATC+AGG	+	chr5.1:21620187-21620206	MS.gene068609:CDS	30.0%
!!	CATTTTGTTTCAGAATCTTG+AGG	+	chr5.1:21620420-21620439	MS.gene068609:CDS	30.0%
!!	CTCAAGATTCTGAAACAAAA+TGG	-	chr5.1:21620422-21620441	None:intergenic	30.0%
!!!	TGGTTTTTTGGGAATTCTTA+TGG	+	chr5.1:21620508-21620527	MS.gene068609:CDS	30.0%
	ACTACCAAGATGAAAATCCA+TGG	-	chr5.1:21620029-21620048	None:intergenic	35.0%
	AGAAGATATTGGACAAAAGG+TGG	+	chr5.1:21619845-21619864	MS.gene068609:CDS	35.0%
!	ATGGATTTTCATCTTGGTAG+TGG	+	chr5.1:21620028-21620047	MS.gene068609:CDS	35.0%
!	CATGTTTTGCAGAAATGTCT+TGG	-	chr5.1:21619824-21619843	None:intergenic	35.0%
!	GTAGTAGCAGAATTTTGTGT+TGG	-	chr5.1:21619780-21619799	None:intergenic	35.0%
!!	GATGATAGAGCTTTTTCTGT+TGG	+	chr5.1:21620454-21620473	MS.gene068609:CDS	35.0%
!!	GATTCTGAAACAAAATGGGT+TGG	-	chr5.1:21620417-21620436	None:intergenic	35.0%
!!	TTATCTATGCTTTTTGGTGG+TGG	+	chr5.1:21620340-21620359	MS.gene068609:CDS	35.0%
	CCAAGATGAAAATCCATGGA+AGG	-	chr5.1:21620025-21620044	None:intergenic	40.0%
	TCTTCTTCTTCAGAGCTTGT+TGG	+	chr5.1:21619968-21619987	MS.gene068609:CDS	40.0%
	TGGAAGGTGAAGAAAGAGAA+TGG	-	chr5.1:21620009-21620028	None:intergenic	40.0%
	TTCTCTTTCTTCACCTTCCA+TGG	+	chr5.1:21620009-21620028	MS.gene068609:CDS	40.0%
!	CCTTCCATGGATTTTCATCT+TGG	+	chr5.1:21620022-21620041	MS.gene068609:CDS	40.0%
!!	TGAAACAAAATGGGTTGGAG+TGG	-	chr5.1:21620412-21620431	None:intergenic	40.0%
!!!	CAGCAACTGAGTGGTTTTTT+GGG	+	chr5.1:21620497-21620516	MS.gene068609:CDS	40.0%
	CTATGAACCAAGACTTGCAC+TGG	+	chr5.1:21620299-21620318	MS.gene068609:CDS	45.0%
	GCTTTACGCAACGTTCCAAT+CGG	+	chr5.1:21619869-21619888	MS.gene068609:CDS	45.0%
	TTTCTACATCCACCACCGAT+TGG	-	chr5.1:21619887-21619906	None:intergenic	45.0%
!!	GACATGATAGTGGAAGCAAC+TGG	+	chr5.1:21620569-21620588	MS.gene068609:CDS	45.0%
!!	GATAGTGGAAGCAACTGGAA+TGG	+	chr5.1:21620574-21620593	MS.gene068609:CDS	45.0%
!!	TCTTCTTCAGAGCTTGTTGG+TGG	+	chr5.1:21619971-21619990	MS.gene068609:CDS	45.0%
!!!	GCAGCAACTGAGTGGTTTTT+TGG	+	chr5.1:21620496-21620515	MS.gene068609:CDS	45.0%
	AGTGGAAGCAACTGGAATGG+AGG	+	chr5.1:21620577-21620596	MS.gene068609:CDS	50.0%
	ATGGAGGTGGTGTTCATGGT+TGG	+	chr5.1:21620593-21620612	MS.gene068609:CDS	50.0%
	GAGAAGATGCAGCAACTGAG+TGG	+	chr5.1:21620488-21620507	MS.gene068609:CDS	50.0%
	GTAGCTTCCAGTGCAAGTCT+TGG	-	chr5.1:21620309-21620328	None:intergenic	50.0%
	GTGTTGGGAGAGTCACATCT+TGG	-	chr5.1:21619764-21619783	None:intergenic	50.0%
	TGGAATGGAGGTGGTGTTCA+TGG	+	chr5.1:21620589-21620608	MS.gene068609:CDS	50.0%
	TTACGCAACGTTCCAATCGG+TGG	+	chr5.1:21619872-21619891	MS.gene068609:CDS	50.0%
	GCTACACCTACTGCAAGTGG+TGG	+	chr5.1:21620541-21620560	MS.gene068609:CDS	55.0%
	GCTGCTACACCTACTGCAAG+TGG	+	chr5.1:21620538-21620557	MS.gene068609:CDS	55.0%
	GGAAGCAACTGGAATGGAGG+TGG	+	chr5.1:21620580-21620599	MS.gene068609:CDS	55.0%
	GGTGGAGCTGGACATGATAG+TGG	+	chr5.1:21620559-21620578	MS.gene068609:CDS	55.0%
	CCAGCTCCACCACTTGCAGT+AGG	-	chr5.1:21620550-21620569	None:intergenic	60.0%
	CGCAACGTTCCAATCGGTGG+TGG	+	chr5.1:21619875-21619894	MS.gene068609:CDS	60.0%
!	CCTACTGCAAGTGGTGGAGC+TGG	+	chr5.1:21620547-21620566	MS.gene068609:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	21619752	21620651	21619752	ID=MS.gene068609
chr5.1	mRNA	21619752	21620651	21619752	ID=MS.gene068609.t1;Parent=MS.gene068609
chr5.1	exon	21619752	21620651	21619752	ID=MS.gene068609.t1.exon1;Parent=MS.gene068609.t1
chr5.1	CDS	21619752	21620651	21619752	ID=cds.MS.gene068609.t1;Parent=MS.gene068609.t1

Gene Sequence

>MS.gene068609

ATGAAGTGTCCAAGATGTGACTCTCCCAACACAAAATTCTGCTACTACAACAACTATAGCTTAACACAACCAAGACATTTCTGCAAAACATGTAGAAGATATTGGACAAAAGGTGGAGCTTTACGCAACGTTCCAATCGGTGGTGGATGTAGAAAAAACAAGAAAATGAAATCATCATCATCATCAAGACTCTCTTGTGATTCAAAAGACTCAGCTTCTTCTTCTTCAGAGCTTGTTGGTGGCTTGAAATTTCTCCATTCTCTTTCTTCACCTTCCATGGATTTTCATCTTGGTAGTGGTTTATCTTTTCCAAGACTTCAACTTCATAATCACCCTCAAATTTCTACTACTCCTATGTATAACCAGTTTTCATCTTTTGGAGAAACTTCTTCTGCTATGAATAACTATCATGGTTCTTCAAATTCTGTTGCTGCTATGAACTATCCTTTTTCATCAGGTAATTATAATGGTGCAATACAAGGTATGAGTTCAATGAATATTAATCATAGCAATAATAATATTGCTTCTTCTATTGAATCATTGAGTTCTATGAACCAAGACTTGCACTGGAAGCTACAGCAACAAAGATTATCTATGCTTTTTGGTGGTGGAGAAAATCAGAAAGATAATAACAATCTTCAGAATCAGACAGAGAAGCCACTCCAACCCATTTTGTTTCAGAATCTTGAGGTTACAAAGAATGATGATAGAGCTTTTTCTGTTGGAAATTCAAGAAGAGAAGATGCAGCAACTGAGTGGTTTTTTGGGAATTCTTATGGTTCAGCTGCTGCTACACCTACTGCAAGTGGTGGAGCTGGACATGATAGTGGAAGCAACTGGAATGGAGGTGGTGTTCATGGTTGGAGTGATGTGCAACAGCAATATAGTGCTTTGCCCTAG

Protein sequence

>MS.gene068609.t1

MKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKMKSSSSSRLSCDSKDSASSSSELVGGLKFLHSLSSPSMDFHLGSGLSFPRLQLHNHPQISTTPMYNQFSSFGETSSAMNNYHGSSNSVAAMNYPFSSGNYNGAIQGMSSMNINHSNNNIASSIESLSSMNQDLHWKLQQQRLSMLFGGGENQKDNNNLQNQTEKPLQPILFQNLEVTKNDDRAFSVGNSRREDAATEWFFGNSYGSAAATPTASGGAGHDSGSNWNGGGVHGWSDVQQQYSALP