Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059607.t1 | XP_013453119.1 | 90.8 | 250 | 16 | 2 | 1 | 250 | 1 | 243 | 1.50E-122 | 449.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059607.t1 | Q9ZSY8 | 60.0 | 275 | 76 | 9 | 4 | 250 | 26 | 294 | 1.3e-71 | 271.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059607.t1 | A0A072UBZ5 | 90.8 | 250 | 16 | 2 | 1 | 250 | 1 | 243 | 1.1e-122 | 449.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene059607.t1 | TR | AUX/IAA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049404 | MS.gene059607 | 0.816107 | 6.56E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene059607 | 0.819557 | 1.09E-52 | -1.69E-46 |
| MS.gene050020 | MS.gene059607 | 0.827661 | 1.38E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene059607 | 0.80939 | 1.94E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene059607 | 0.811587 | 6.50E-51 | -1.69E-46 |
| MS.gene054559 | MS.gene059607 | 0.802 | 6.90E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene059607 | 0.836449 | 9.30E-57 | -1.69E-46 |
| MS.gene055357 | MS.gene059607 | 0.829572 | 4.78E-55 | -1.69E-46 |
| MS.gene055358 | MS.gene059607 | 0.84229 | 2.83E-58 | -1.69E-46 |
| MS.gene057060 | MS.gene059607 | 0.808754 | 2.65E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene059607 | 0.809203 | 2.13E-50 | -1.69E-46 |
| MS.gene059161 | MS.gene059607 | 0.808579 | 2.89E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene060137 | -0.822941 | 1.81E-53 | -1.69E-46 |
| MS.gene059607 | MS.gene060803 | 0.80612 | 9.60E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene061333 | 0.871351 | 7.30E-67 | -1.69E-46 |
| MS.gene059607 | MS.gene061334 | 0.863875 | 1.82E-64 | -1.69E-46 |
| MS.gene059607 | MS.gene061505 | 0.815665 | 8.23E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene061719 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene059607 | MS.gene061947 | 0.814105 | 1.82E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene064944 | 0.82951 | 4.95E-55 | -1.69E-46 |
| MS.gene059607 | MS.gene066264 | 0.807389 | 5.18E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene066433 | 0.840908 | 6.55E-58 | -1.69E-46 |
| MS.gene059607 | MS.gene068609 | 0.804065 | 2.58E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene069956 | 0.811156 | 8.06E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene072397 | -0.83036 | 3.07E-55 | -1.69E-46 |
| MS.gene059607 | MS.gene073016 | -0.801406 | 9.14E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene074184 | -0.809201 | 2.13E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene074616 | 0.800019 | 1.75E-48 | -1.69E-46 |
| MS.gene059607 | MS.gene08594 | 0.841151 | 5.66E-58 | -1.69E-46 |
| MS.gene059607 | MS.gene21449 | 0.806179 | 9.33E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene23304 | 0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene27302 | 0.808701 | 2.72E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene28854 | 0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene30930 | 0.802136 | 6.47E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene31397 | 0.811584 | 6.51E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene32874 | 0.81598 | 7.00E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene35408 | 0.817286 | 3.57E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene35822 | 0.803757 | 2.99E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene35823 | 0.807125 | 5.89E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene35824 | 0.815472 | 9.08E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene35864 | 0.808941 | 2.42E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene35967 | 0.817138 | 3.85E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene36569 | 0.805461 | 1.32E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene38381 | 0.82232 | 2.52E-53 | -1.69E-46 |
| MS.gene059607 | MS.gene38876 | 0.817333 | 3.48E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene40837 | -0.812963 | 3.25E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene42645 | 0.803109 | 4.08E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene44461 | 0.813556 | 2.41E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene44502 | 0.812746 | 3.63E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene45193 | 0.807547 | 4.79E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene45194 | 0.801385 | 9.23E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene45918 | 0.819275 | 1.26E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene47338 | 0.80545 | 1.33E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene47339 | 0.802784 | 4.76E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene47340 | 0.805738 | 1.15E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene48577 | 0.815187 | 1.05E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene51459 | 0.815724 | 7.98E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene53156 | 0.838399 | 2.94E-57 | -1.69E-46 |
| MS.gene059607 | MS.gene53427 | 0.807318 | 5.36E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene53586 | 0.848157 | 7.33E-60 | -1.69E-46 |
| MS.gene059607 | MS.gene54538 | 0.812111 | 5.00E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene54540 | 0.817964 | 2.51E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene57027 | 0.804794 | 1.82E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene58503 | 0.814444 | 1.54E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene58686 | 0.826384 | 2.80E-54 | -1.69E-46 |
| MS.gene059607 | MS.gene59840 | 0.83127 | 1.84E-55 | -1.69E-46 |
| MS.gene059607 | MS.gene59948 | 0.805543 | 1.27E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene59949 | 0.80124 | 9.89E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene61139 | 0.808582 | 2.89E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene62214 | 0.809417 | 1.91E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene64101 | 0.813334 | 2.70E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene64249 | 0.862824 | 3.85E-64 | -1.69E-46 |
| MS.gene059607 | MS.gene65271 | 0.808202 | 3.48E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene66969 | 0.810975 | 8.82E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene68988 | 0.895582 | 8.36E-76 | -1.69E-46 |
| MS.gene059607 | MS.gene68989 | 0.899144 | 2.65E-77 | -1.69E-46 |
| MS.gene059607 | MS.gene69794 | 0.812268 | 4.62E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene70022 | 0.811553 | 6.61E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene72203 | 0.805494 | 1.30E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene72251 | 0.932315 | 1.02E-94 | -1.69E-46 |
| MS.gene059607 | MS.gene72268 | 0.858819 | 6.34E-63 | -1.69E-46 |
| MS.gene059607 | MS.gene73250 | 0.806945 | 6.43E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene74367 | 0.837481 | 5.07E-57 | -1.69E-46 |
| MS.gene059607 | MS.gene74370 | 0.803932 | 2.75E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene74373 | 0.807513 | 4.87E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene75490 | 0.801987 | 6.95E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene77453 | 0.80769 | 4.47E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene77781 | 0.849507 | 3.09E-60 | -1.69E-46 |
| MS.gene059607 | MS.gene79960 | 0.804091 | 2.55E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene81047 | 0.805119 | 1.56E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene84709 | 0.802211 | 6.25E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene86335 | 0.801888 | 7.28E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene87669 | 0.800235 | 1.59E-48 | -1.69E-46 |
| MS.gene059607 | MS.gene88243 | 0.837818 | 4.15E-57 | -1.69E-46 |
| MS.gene059607 | MS.gene89940 | 0.814172 | 1.76E-51 | -1.69E-46 |
| MS.gene059607 | MS.gene91807 | 0.829262 | 5.68E-55 | -1.69E-46 |
| MS.gene059607 | MS.gene91808 | 0.816575 | 5.15E-52 | -1.69E-46 |
| MS.gene059607 | MS.gene91809 | 0.831795 | 1.36E-55 | -1.69E-46 |
| MS.gene059607 | MS.gene92383 | 0.808822 | 2.56E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene95255 | 0.804238 | 2.38E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene96210 | 0.809139 | 2.19E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene96215 | 0.820275 | 7.47E-53 | -1.69E-46 |
| MS.gene059607 | MS.gene98445 | -0.803633 | 3.18E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059607.t1 | MTR_6g488150 | 90.800 | 250 | 16 | 2 | 1 | 250 | 1 | 243 | 2.47e-167 | 464 |
| MS.gene059607.t1 | MTR_6g488150 | 87.500 | 184 | 16 | 2 | 1 | 184 | 1 | 177 | 6.01e-112 | 321 |
| MS.gene059607.t1 | MTR_8g103030 | 61.765 | 272 | 57 | 7 | 14 | 250 | 23 | 282 | 6.11e-103 | 302 |
| MS.gene059607.t1 | MTR_8g067530 | 54.839 | 279 | 91 | 6 | 7 | 250 | 67 | 345 | 2.55e-91 | 275 |
| MS.gene059607.t1 | MTR_5g030710 | 53.818 | 275 | 87 | 7 | 15 | 250 | 51 | 324 | 5.95e-90 | 270 |
| MS.gene059607.t1 | MTR_2g101500 | 50.505 | 297 | 90 | 7 | 10 | 250 | 20 | 315 | 1.97e-84 | 256 |
| MS.gene059607.t1 | MTR_5g067350 | 53.147 | 286 | 86 | 12 | 7 | 250 | 57 | 336 | 5.86e-80 | 245 |
| MS.gene059607.t1 | MTR_1g093240 | 49.194 | 248 | 92 | 6 | 13 | 252 | 6 | 227 | 2.46e-68 | 212 |
| MS.gene059607.t1 | MTR_1g093240 | 49.593 | 246 | 90 | 6 | 13 | 250 | 6 | 225 | 7.01e-68 | 211 |
| MS.gene059607.t1 | MTR_1g080860 | 47.791 | 249 | 96 | 6 | 15 | 250 | 15 | 242 | 2.36e-64 | 202 |
| MS.gene059607.t1 | MTR_1g080860 | 47.390 | 249 | 97 | 6 | 15 | 250 | 15 | 242 | 1.12e-63 | 200 |
| MS.gene059607.t1 | MTR_1g070520 | 62.252 | 151 | 50 | 3 | 105 | 250 | 86 | 234 | 4.87e-58 | 186 |
| MS.gene059607.t1 | MTR_7g096090 | 60.274 | 146 | 56 | 1 | 105 | 250 | 96 | 239 | 2.89e-57 | 184 |
| MS.gene059607.t1 | MTR_1g093240 | 45.333 | 225 | 89 | 6 | 13 | 229 | 6 | 204 | 7.10e-54 | 174 |
| MS.gene059607.t1 | MTR_1g070830 | 42.373 | 236 | 91 | 6 | 15 | 250 | 12 | 202 | 3.30e-52 | 169 |
| MS.gene059607.t1 | MTR_1g040675 | 42.437 | 238 | 80 | 8 | 15 | 250 | 1 | 183 | 5.16e-51 | 166 |
| MS.gene059607.t1 | MTR_1g076270 | 42.616 | 237 | 69 | 6 | 13 | 249 | 9 | 178 | 6.02e-50 | 163 |
| MS.gene059607.t1 | MTR_1g093350 | 42.616 | 237 | 69 | 6 | 13 | 249 | 9 | 178 | 6.02e-50 | 163 |
| MS.gene059607.t1 | MTR_5g067350 | 46.119 | 219 | 73 | 11 | 7 | 183 | 57 | 272 | 5.92e-40 | 140 |
| MS.gene059607.t1 | MTR_1g040675 | 39.631 | 217 | 74 | 8 | 15 | 229 | 1 | 162 | 1.23e-39 | 136 |
| MS.gene059607.t1 | MTR_2g100780 | 37.652 | 247 | 122 | 9 | 21 | 245 | 18 | 254 | 6.55e-36 | 129 |
| MS.gene059607.t1 | MTR_2g100780 | 37.652 | 247 | 122 | 9 | 21 | 245 | 18 | 254 | 8.08e-36 | 129 |
| MS.gene059607.t1 | MTR_1g069495 | 42.614 | 176 | 68 | 4 | 108 | 250 | 82 | 257 | 1.48e-35 | 129 |
| MS.gene059607.t1 | MTR_4g011880 | 49.660 | 147 | 45 | 3 | 106 | 252 | 52 | 169 | 3.06e-34 | 122 |
| MS.gene059607.t1 | MTR_8g014520 | 32.374 | 278 | 139 | 7 | 9 | 251 | 3 | 266 | 1.81e-32 | 120 |
| MS.gene059607.t1 | MTR_8g014520 | 32.721 | 272 | 134 | 7 | 9 | 245 | 3 | 260 | 2.74e-32 | 120 |
| MS.gene059607.t1 | MTR_2g102490 | 54.717 | 106 | 38 | 3 | 141 | 244 | 86 | 183 | 4.02e-32 | 117 |
| MS.gene059607.t1 | MTR_3g106850 | 30.864 | 162 | 80 | 6 | 94 | 246 | 72 | 210 | 2.51e-18 | 81.6 |
| MS.gene059607.t1 | MTR_4g124300 | 36.364 | 143 | 64 | 5 | 105 | 246 | 68 | 184 | 2.67e-18 | 80.9 |
| MS.gene059607.t1 | MTR_7g110790 | 36.434 | 129 | 64 | 3 | 114 | 242 | 45 | 155 | 1.42e-17 | 78.2 |
| MS.gene059607.t1 | MTR_1g085750 | 36.641 | 131 | 59 | 4 | 112 | 242 | 64 | 170 | 2.28e-16 | 75.5 |
| MS.gene059607.t1 | MTR_4g115075 | 29.452 | 146 | 66 | 3 | 106 | 243 | 90 | 206 | 1.31e-14 | 71.2 |
| MS.gene059607.t1 | MTR_1g109510 | 34.483 | 145 | 73 | 5 | 101 | 242 | 43 | 168 | 5.37e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059607.t1 | AT4G29080 | 60.364 | 275 | 75 | 9 | 4 | 250 | 26 | 294 | 9.40e-96 | 284 |
| MS.gene059607.t1 | AT2G22670 | 50.570 | 263 | 102 | 7 | 15 | 250 | 47 | 308 | 3.00e-79 | 243 |
| MS.gene059607.t1 | AT2G22670 | 50.570 | 263 | 102 | 7 | 15 | 250 | 47 | 308 | 3.00e-79 | 243 |
| MS.gene059607.t1 | AT2G22670 | 50.570 | 263 | 102 | 7 | 15 | 250 | 64 | 325 | 4.28e-79 | 243 |
| MS.gene059607.t1 | AT2G22670 | 48.540 | 274 | 112 | 8 | 15 | 260 | 47 | 319 | 8.27e-79 | 241 |
| MS.gene059607.t1 | AT2G22670 | 48.540 | 274 | 112 | 8 | 15 | 260 | 47 | 319 | 8.27e-79 | 241 |
| MS.gene059607.t1 | AT5G65670 | 49.434 | 265 | 105 | 3 | 15 | 250 | 61 | 325 | 4.33e-76 | 235 |
| MS.gene059607.t1 | AT5G65670 | 49.434 | 265 | 105 | 3 | 15 | 250 | 61 | 325 | 5.18e-76 | 235 |
| MS.gene059607.t1 | AT3G04730 | 47.809 | 251 | 89 | 7 | 15 | 250 | 2 | 225 | 6.23e-68 | 211 |
| MS.gene059607.t1 | AT4G14550 | 49.378 | 241 | 93 | 7 | 15 | 250 | 1 | 217 | 6.42e-68 | 211 |
| MS.gene059607.t1 | AT4G14550 | 48.548 | 241 | 95 | 6 | 15 | 250 | 1 | 217 | 1.19e-66 | 207 |
| MS.gene059607.t1 | AT3G23050 | 46.899 | 258 | 101 | 7 | 15 | 259 | 6 | 240 | 4.36e-66 | 206 |
| MS.gene059607.t1 | AT1G04250 | 43.411 | 258 | 103 | 9 | 15 | 264 | 7 | 229 | 1.74e-61 | 194 |
| MS.gene059607.t1 | AT4G14550 | 46.119 | 219 | 89 | 7 | 15 | 228 | 1 | 195 | 2.68e-53 | 172 |
| MS.gene059607.t1 | AT3G23050 | 45.175 | 228 | 89 | 7 | 15 | 229 | 6 | 210 | 1.28e-51 | 168 |
| MS.gene059607.t1 | AT1G04240 | 44.068 | 236 | 78 | 8 | 15 | 250 | 5 | 186 | 1.26e-49 | 162 |
| MS.gene059607.t1 | AT1G04240 | 42.742 | 248 | 88 | 8 | 3 | 250 | 93 | 286 | 1.04e-48 | 163 |
| MS.gene059607.t1 | AT5G43700 | 39.831 | 236 | 78 | 6 | 15 | 250 | 11 | 182 | 9.07e-46 | 152 |
| MS.gene059607.t1 | AT3G23030 | 41.350 | 237 | 66 | 7 | 13 | 249 | 7 | 170 | 3.82e-42 | 143 |
| MS.gene059607.t1 | AT1G52830 | 38.272 | 243 | 94 | 9 | 11 | 253 | 2 | 188 | 4.21e-42 | 143 |
| MS.gene059607.t1 | AT3G23030 | 41.350 | 237 | 66 | 7 | 13 | 249 | 94 | 257 | 3.70e-41 | 143 |
| MS.gene059607.t1 | AT3G15540 | 40.000 | 240 | 90 | 8 | 14 | 252 | 5 | 191 | 4.75e-41 | 140 |
| MS.gene059607.t1 | AT4G14560 | 41.880 | 234 | 62 | 7 | 13 | 246 | 5 | 164 | 8.23e-40 | 137 |
| MS.gene059607.t1 | AT4G28640 | 44.512 | 164 | 71 | 4 | 103 | 250 | 83 | 242 | 4.51e-37 | 132 |
| MS.gene059607.t1 | AT4G28640 | 44.444 | 162 | 70 | 4 | 103 | 248 | 83 | 240 | 9.05e-37 | 131 |
| MS.gene059607.t1 | AT2G33310 | 45.732 | 164 | 61 | 5 | 108 | 250 | 76 | 232 | 5.56e-36 | 129 |
| MS.gene059607.t1 | AT2G33310 | 45.732 | 164 | 61 | 5 | 108 | 250 | 75 | 231 | 5.66e-36 | 129 |
| MS.gene059607.t1 | AT2G33310 | 45.732 | 164 | 61 | 5 | 108 | 250 | 75 | 231 | 5.66e-36 | 129 |
| MS.gene059607.t1 | AT1G15580 | 34.764 | 233 | 74 | 4 | 12 | 244 | 5 | 159 | 5.76e-36 | 126 |
| MS.gene059607.t1 | AT3G16500 | 36.863 | 255 | 118 | 9 | 7 | 245 | 25 | 252 | 9.43e-36 | 129 |
| MS.gene059607.t1 | AT3G16500 | 36.863 | 255 | 118 | 9 | 7 | 245 | 25 | 252 | 1.06e-35 | 129 |
| MS.gene059607.t1 | AT4G28640 | 44.444 | 162 | 70 | 4 | 103 | 248 | 83 | 240 | 1.66e-35 | 129 |
| MS.gene059607.t1 | AT1G04550 | 44.048 | 168 | 63 | 5 | 108 | 253 | 69 | 227 | 4.85e-35 | 126 |
| MS.gene059607.t1 | AT1G51950 | 40.588 | 170 | 76 | 4 | 97 | 245 | 85 | 250 | 7.22e-31 | 116 |
| MS.gene059607.t1 | AT1G04100 | 36.994 | 173 | 80 | 4 | 105 | 250 | 90 | 260 | 8.05e-31 | 116 |
| MS.gene059607.t1 | AT4G14550 | 41.279 | 172 | 74 | 5 | 15 | 181 | 1 | 150 | 6.07e-30 | 111 |
| MS.gene059607.t1 | AT3G23050 | 40.437 | 183 | 75 | 6 | 15 | 184 | 6 | 167 | 2.32e-29 | 109 |
| MS.gene059607.t1 | AT5G25890 | 36.620 | 142 | 68 | 3 | 109 | 250 | 49 | 168 | 6.10e-26 | 100 |
| MS.gene059607.t1 | AT3G17600 | 37.857 | 140 | 63 | 4 | 103 | 242 | 39 | 154 | 4.57e-22 | 90.5 |
| MS.gene059607.t1 | AT3G62100 | 38.462 | 104 | 49 | 1 | 140 | 243 | 81 | 169 | 1.36e-18 | 81.3 |
| MS.gene059607.t1 | AT2G46990 | 37.143 | 105 | 51 | 1 | 140 | 244 | 83 | 172 | 3.03e-18 | 80.5 |
| MS.gene059607.t1 | AT4G32280 | 25.789 | 190 | 87 | 6 | 86 | 242 | 72 | 240 | 1.14e-14 | 72.4 |
| MS.gene059607.t1 | AT4G32280 | 34.653 | 101 | 46 | 2 | 142 | 242 | 118 | 198 | 6.37e-14 | 69.7 |
| MS.gene059607.t1 | AT1G15050 | 37.069 | 116 | 55 | 3 | 132 | 247 | 53 | 150 | 1.55e-13 | 67.4 |
| MS.gene059607.t1 | AT2G46990 | 37.778 | 90 | 41 | 1 | 140 | 229 | 83 | 157 | 1.96e-13 | 67.0 |
| MS.gene059607.t1 | AT3G62100 | 37.778 | 90 | 41 | 1 | 140 | 229 | 81 | 155 | 2.03e-13 | 67.0 |
| MS.gene059607.t1 | AT1G15050 | 37.069 | 116 | 55 | 3 | 132 | 247 | 85 | 182 | 2.38e-13 | 67.4 |
| MS.gene059607.t1 | AT2G01200 | 34.711 | 121 | 63 | 2 | 127 | 247 | 84 | 188 | 5.77e-13 | 66.6 |
| MS.gene059607.t1 | AT2G01200 | 34.711 | 121 | 63 | 2 | 127 | 247 | 84 | 188 | 5.77e-13 | 66.6 |
Find 49 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACATAAAGGCATCCAAATT+TGG | 0.170065 | 6.4:-60922674 | None:intergenic |
| TACTCTTTATGCATGCTTAA+TGG | 0.190958 | 6.4:+60921514 | MS.gene059607:CDS |
| AGATCCACTTTCCTCAAGTA+TGG | 0.227669 | 6.4:-60922718 | None:intergenic |
| GGCCACCAATCCGTTCTTTC+AGG | 0.268848 | 6.4:+60922599 | MS.gene059607:CDS |
| TTTAAGTTGCAGCATATTTA+CGG | 0.284271 | 6.4:-60929699 | None:intergenic |
| GATGATGTAGAAGCCAAATT+TGG | 0.307716 | 6.4:+60922661 | MS.gene059607:CDS |
| ATGAAAAGTGTAGGTCAATT+TGG | 0.319033 | 6.4:+60923236 | MS.gene059607:intron |
| TTGACTCTTGCAAGAGGTTA+AGG | 0.334728 | 6.4:+60923787 | MS.gene059607:CDS |
| AGTTCTGAAGCAATTGGATT+AGG | 0.360095 | 6.4:+60923819 | MS.gene059607:CDS |
| TTTGTGTGAAAGTAGATTGA+TGG | 0.380197 | 6.4:+60923286 | MS.gene059607:CDS |
| CCTTCACAACAGAACCTTGT+TGG | 0.383043 | 6.4:-60921606 | None:intergenic |
| ATGAAAAGTTCTGAAGCAAT+TGG | 0.388635 | 6.4:+60923813 | MS.gene059607:CDS |
| AAGAAGAAGTCTCAGATATA+TGG | 0.397635 | 6.4:+60921664 | MS.gene059607:CDS |
| CACAACAGAACCTTGTTGGT+TGG | 0.401071 | 6.4:-60921602 | None:intergenic |
| ATCACCATCTTTATCTTCAT+AGG | 0.403740 | 6.4:-60923339 | None:intergenic |
| TGATCTAGGGAACAAATTGT+AGG | 0.417413 | 6.4:+60922574 | MS.gene059607:intron |
| TTTCTTCAAACCAATTTCAA+TGG | 0.423741 | 6.4:-60921572 | None:intergenic |
| CTCTCTGGTGATTCAGAACC+AGG | 0.434581 | 6.4:-60921460 | None:intergenic |
| AGATTGATGGATCTCCTTCA+TGG | 0.440946 | 6.4:+60923299 | MS.gene059607:CDS |
| GTAGGTCAATTTGGCTCTCA+TGG | 0.457514 | 6.4:+60923245 | MS.gene059607:intron |
| GACTTCTTCTTCTCATTCAA+AGG | 0.481249 | 6.4:-60921652 | None:intergenic |
| TTCTTTCAGGAAGAATTCAA+TGG | 0.488415 | 6.4:+60922612 | MS.gene059607:CDS |
| AGAAGATCATTATCTCTCTC+TGG | 0.489102 | 6.4:-60921475 | None:intergenic |
| ATGAAGATAAAGATGGTGAT+TGG | 0.490100 | 6.4:+60923342 | MS.gene059607:CDS |
| TATGTAAAAGTTAGCATGGA+TGG | 0.496315 | 6.4:+60922691 | MS.gene059607:CDS |
| GAGTTAAGACTTGGTTTACC+TGG | 0.509603 | 6.4:+60921442 | MS.gene059607:CDS |
| TTGAATTCTTCCTGAAAGAA+CGG | 0.519997 | 6.4:-60922609 | None:intergenic |
| AAAATATGCACTTACTTCCA+TGG | 0.525031 | 6.4:-60923383 | None:intergenic |
| GATCCACTTTCCTCAAGTAT+GGG | 0.530733 | 6.4:-60922717 | None:intergenic |
| TTCCTGAAAGAACGGATTGG+TGG | 0.533390 | 6.4:-60922601 | None:intergenic |
| TGCTAGTTGGTGATGTTCCA+TGG | 0.551199 | 6.4:+60923366 | MS.gene059607:CDS |
| AAGGCTACTGAGTTAAGACT+TGG | 0.551451 | 6.4:+60921433 | MS.gene059607:CDS |
| CCTTTATGTAAAAGTTAGCA+TGG | 0.552884 | 6.4:+60922687 | MS.gene059607:CDS |
| TTCTTCCTGAAAGAACGGAT+TGG | 0.577749 | 6.4:-60922604 | None:intergenic |
| CTCACCTATGAAGATAAAGA+TGG | 0.579438 | 6.4:+60923335 | MS.gene059607:CDS |
| TGCCCCATACTTGAGGAAAG+TGG | 0.579458 | 6.4:+60922714 | MS.gene059607:CDS |
| CCAACAAGGTTCTGTTGTGA+AGG | 0.586707 | 6.4:+60921606 | MS.gene059607:CDS |
| GTCTTAACTCAGTAGCCTTG+AGG | 0.600451 | 6.4:-60921429 | None:intergenic |
| GATGGTGATTGGATGCTAGT+TGG | 0.601437 | 6.4:+60923353 | MS.gene059607:CDS |
| CATCTTTATCTTCATAGGTG+AGG | 0.607712 | 6.4:-60923334 | None:intergenic |
| GCTTTGCCGTTCTTCTTGTG+CGG | 0.612008 | 6.4:-60929655 | None:intergenic |
| TAACAATGGCTTGAACCTCA+AGG | 0.615787 | 6.4:+60921414 | MS.gene059607:CDS |
| GGACATATTCTGAACCATGA+AGG | 0.615918 | 6.4:-60923313 | None:intergenic |
| TATACACCGCACAAGAAGAA+CGG | 0.616983 | 6.4:+60929649 | MS.gene059607:CDS |
| TGGATGGTGCCCCATACTTG+AGG | 0.620867 | 6.4:+60922707 | MS.gene059607:CDS |
| CTAGGGAACAAATTGTAGGA+TGG | 0.620947 | 6.4:+60922578 | MS.gene059607:intron |
| TGTTCATTGACTCTTGCAAG+AGG | 0.620974 | 6.4:+60923781 | MS.gene059607:CDS |
| AAAGATAGTTCCAACCAACA+AGG | 0.652975 | 6.4:+60921592 | MS.gene059607:CDS |
| ATCCACTTTCCTCAAGTATG+GGG | 0.656738 | 6.4:-60922716 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 60921382 | 60929745 | 60921382 | ID=MS.gene059607 |
| chr6.4 | mRNA | 60921382 | 60929745 | 60921382 | ID=MS.gene059607.t1;Parent=MS.gene059607 |
| chr6.4 | exon | 60921382 | 60921698 | 60921382 | ID=MS.gene059607.t1.exon1;Parent=MS.gene059607.t1 |
| chr6.4 | CDS | 60921382 | 60921698 | 60921382 | ID=cds.MS.gene059607.t1;Parent=MS.gene059607.t1 |
| chr6.4 | exon | 60922582 | 60922808 | 60922582 | ID=MS.gene059607.t1.exon2;Parent=MS.gene059607.t1 |
| chr6.4 | CDS | 60922582 | 60922808 | 60922582 | ID=cds.MS.gene059607.t1;Parent=MS.gene059607.t1 |
| chr6.4 | exon | 60923249 | 60923390 | 60923249 | ID=MS.gene059607.t1.exon3;Parent=MS.gene059607.t1 |
| chr6.4 | CDS | 60923249 | 60923390 | 60923249 | ID=cds.MS.gene059607.t1;Parent=MS.gene059607.t1 |
| chr6.4 | exon | 60923779 | 60923840 | 60923779 | ID=MS.gene059607.t1.exon4;Parent=MS.gene059607.t1 |
| chr6.4 | CDS | 60923779 | 60923840 | 60923779 | ID=cds.MS.gene059607.t1;Parent=MS.gene059607.t1 |
| chr6.4 | exon | 60929648 | 60929745 | 60929648 | ID=MS.gene059607.t1.exon5;Parent=MS.gene059607.t1 |
| chr6.4 | CDS | 60929648 | 60929745 | 60929648 | ID=cds.MS.gene059607.t1;Parent=MS.gene059607.t1 |
| Gene Sequence |
| Protein sequence |
