Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071662.t1 | TKY51141.1 | 78.4 | 208 | 34 | 1 | 1 | 197 | 1 | 208 | 3.90E-85 | 324.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071662.t1 | P32869 | 75.0 | 208 | 40 | 2 | 1 | 197 | 1 | 207 | 3.4e-82 | 305.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071662.t1 | T2DMR3 | 78.8 | 208 | 32 | 2 | 1 | 197 | 1 | 207 | 4.7e-85 | 323.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049217 | MS.gene071662 | 0.80188 | 7.31E-49 | -1.69E-46 |
MS.gene049232 | MS.gene071662 | 0.810407 | 1.17E-50 | -1.69E-46 |
MS.gene049320 | MS.gene071662 | 0.820891 | 5.40E-53 | -1.69E-46 |
MS.gene050581 | MS.gene071662 | 0.816617 | 5.04E-52 | -1.69E-46 |
MS.gene050986 | MS.gene071662 | 0.810455 | 1.14E-50 | -1.69E-46 |
MS.gene051509 | MS.gene071662 | 0.807699 | 4.45E-50 | -1.69E-46 |
MS.gene051551 | MS.gene071662 | 0.815557 | 8.70E-52 | -1.69E-46 |
MS.gene051564 | MS.gene071662 | 0.803497 | 3.39E-49 | -1.69E-46 |
MS.gene052271 | MS.gene071662 | 0.850047 | 2.19E-60 | -1.69E-46 |
MS.gene053018 | MS.gene071662 | 0.814568 | 1.44E-51 | -1.69E-46 |
MS.gene053213 | MS.gene071662 | 0.823635 | 1.25E-53 | -1.69E-46 |
MS.gene053286 | MS.gene071662 | 0.823014 | 1.74E-53 | -1.69E-46 |
MS.gene053813 | MS.gene071662 | 0.806505 | 7.96E-50 | -1.69E-46 |
MS.gene054642 | MS.gene071662 | 0.80143 | 9.04E-49 | -1.69E-46 |
MS.gene055362 | MS.gene071662 | 0.811637 | 6.34E-51 | -1.69E-46 |
MS.gene055647 | MS.gene071662 | 0.834354 | 3.15E-56 | -1.69E-46 |
MS.gene055722 | MS.gene071662 | 0.819035 | 1.43E-52 | -1.69E-46 |
MS.gene056374 | MS.gene071662 | 0.838117 | 3.48E-57 | -1.69E-46 |
MS.gene056657 | MS.gene071662 | 0.817139 | 3.85E-52 | -1.69E-46 |
MS.gene056942 | MS.gene071662 | 0.833191 | 6.14E-56 | -1.69E-46 |
MS.gene059022 | MS.gene071662 | 0.82136 | 4.21E-53 | -1.69E-46 |
MS.gene060356 | MS.gene071662 | 0.839458 | 1.57E-57 | -1.69E-46 |
MS.gene060482 | MS.gene071662 | 0.824965 | 6.07E-54 | -1.69E-46 |
MS.gene061134 | MS.gene071662 | 0.831306 | 1.80E-55 | -1.69E-46 |
MS.gene061171 | MS.gene071662 | 0.808558 | 2.92E-50 | -1.69E-46 |
MS.gene061200 | MS.gene071662 | 0.822135 | 2.79E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071662.t1 | MTR_1g104630 | 79.899 | 199 | 32 | 3 | 1 | 197 | 1 | 193 | 1.65e-109 | 311 |
MS.gene071662.t1 | MTR_5g006130 | 70.833 | 216 | 37 | 3 | 1 | 197 | 1 | 209 | 1.18e-102 | 295 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071662.t1 | AT1G03130 | 75.145 | 173 | 30 | 2 | 38 | 197 | 32 | 204 | 2.77e-88 | 258 |
MS.gene071662.t1 | AT4G02770 | 73.864 | 176 | 30 | 2 | 38 | 197 | 33 | 208 | 5.39e-87 | 255 |
Find 74 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAACTTGGGCTTTGCGTAAA+AGG | 0.172350 | 1.2:+77718223 | None:intergenic |
CGACCCGGGTTCACTTTCTC+TGG | 0.253150 | 1.2:+77717970 | None:intergenic |
AAGGGGTTGGTCAGAACTTT+AGG | 0.293589 | 1.2:-77717945 | MS.gene071662:CDS |
ATTTCAAAGATTTGTTCTTT+TGG | 0.302487 | 1.2:+77718171 | None:intergenic |
CCTTGCTAACTTGAGAAGAT+TGG | 0.306141 | 1.2:+77718113 | None:intergenic |
GGTCAGAACTTTAGGTCTAT+TGG | 0.344103 | 1.2:-77717937 | MS.gene071662:CDS |
AGCCTAAGACTGAGAGGGTT+TGG | 0.354319 | 1.2:+77718372 | None:intergenic |
AGAGATACGGTCATTAGGTT+TGG | 0.376453 | 1.2:+77718434 | None:intergenic |
CTCTTCACCCCTCCTCTCTC+TGG | 0.385923 | 1.2:-77718459 | MS.gene071662:CDS |
AAAGAACAATGTTTGGCTCT+TGG | 0.389124 | 1.2:-77718090 | MS.gene071662:CDS |
GGTACAGAGATACGGTCATT+AGG | 0.394276 | 1.2:+77718429 | None:intergenic |
AGCAAGGAAAGAACAATGTT+TGG | 0.394375 | 1.2:-77718097 | MS.gene071662:CDS |
CTTGCTAACTTGAGAAGATT+GGG | 0.409133 | 1.2:+77718114 | None:intergenic |
TGGGAAACACTCTATAGAAT+TGG | 0.417334 | 1.2:+77718034 | None:intergenic |
CCACTGAACTTAACCTCTAT+AGG | 0.417689 | 1.2:+77717901 | None:intergenic |
GAGATACGGTCATTAGGTTT+GGG | 0.426468 | 1.2:+77718435 | None:intergenic |
TCTGGGTACACACCATCCTT+AGG | 0.434810 | 1.2:+77717988 | None:intergenic |
TGACCAACCCCTTGGCGACC+CGG | 0.439253 | 1.2:+77717955 | None:intergenic |
TCTATAGAGTGTTTCCCAAT+GGG | 0.441504 | 1.2:-77718029 | MS.gene071662:CDS |
AGAGAGAGGAGGGGTGAAGA+GGG | 0.442080 | 1.2:+77718461 | None:intergenic |
ATCCAAACCCTCTCAGTCTT+AGG | 0.461548 | 1.2:-77718374 | MS.gene071662:CDS |
AAGTATTGAACTTCCCCATT+GGG | 0.462594 | 1.2:+77718015 | None:intergenic |
TACATAAAATTCCTCAACTT+GGG | 0.465412 | 1.2:+77718209 | None:intergenic |
TAAGAATGTTAGTCCTATAG+AGG | 0.473752 | 1.2:-77717914 | MS.gene071662:CDS |
GTTTGGGACCAGAGAGAGGA+GGG | 0.477785 | 1.2:+77718451 | None:intergenic |
CAGAGAGAGGAGGGGTGAAG+AGG | 0.479426 | 1.2:+77718460 | None:intergenic |
CAAATCTTTGAAATGCCTAC+TGG | 0.482126 | 1.2:-77718162 | MS.gene071662:CDS |
ATGTTTGTGTCTTACTCAGG+TGG | 0.482467 | 1.2:+77718279 | None:intergenic |
GACCCGGGTTCACTTTCTCT+GGG | 0.486087 | 1.2:+77717971 | None:intergenic |
GAGAGGAGGGGTGAAGAGGG+AGG | 0.499448 | 1.2:+77718464 | None:intergenic |
AAAGTGAACCCGGGTCGCCA+AGG | 0.500800 | 1.2:-77717964 | MS.gene071662:CDS |
TTACATAAAATTCCTCAACT+TGG | 0.508639 | 1.2:+77718208 | None:intergenic |
TCAGGTGGGGTGAAGCCAAT+TGG | 0.510396 | 1.2:+77718294 | None:intergenic |
GAAGCAACAGAGGCACCAAT+TGG | 0.510520 | 1.2:-77718309 | MS.gene071662:CDS |
AACCCGGGTCGCCAAGGGGT+TGG | 0.516971 | 1.2:-77717958 | MS.gene071662:CDS |
GACCAACCCCTTGGCGACCC+GGG | 0.524362 | 1.2:+77717956 | None:intergenic |
AATGTGGGTGATTGTTTCCA+TGG | 0.524862 | 1.2:+77718408 | None:intergenic |
TTCTATAGAGTGTTTCCCAA+TGG | 0.534519 | 1.2:-77718030 | MS.gene071662:CDS |
CAAGTATTGAACTTCCCCAT+TGG | 0.539423 | 1.2:+77718014 | None:intergenic |
TGTTTGTGTCTTACTCAGGT+GGG | 0.540009 | 1.2:+77718280 | None:intergenic |
TGGATTGGTGAAGGACAATG+TGG | 0.545639 | 1.2:+77718392 | None:intergenic |
TGGCTCTTGGAACTACATTG+AGG | 0.549525 | 1.2:-77718077 | MS.gene071662:CDS |
AAGTGAACCCGGGTCGCCAA+GGG | 0.549528 | 1.2:-77717963 | MS.gene071662:CDS |
GTTTCCATGGTACAGAGATA+CGG | 0.551001 | 1.2:+77718421 | None:intergenic |
GGTTTGGGACCAGAGAGAGG+AGG | 0.559759 | 1.2:+77718450 | None:intergenic |
ATTGGGACCTTCCCTCATGA+TGG | 0.564788 | 1.2:+77718131 | None:intergenic |
GTACCCAGAGAAAGTGAACC+CGG | 0.564935 | 1.2:-77717974 | MS.gene071662:CDS |
GAGAGGGTTTGGATTGGTGA+AGG | 0.565450 | 1.2:+77718383 | None:intergenic |
CAAAACAACAACTGTTACTG+AGG | 0.567600 | 1.2:-77718331 | MS.gene071662:CDS |
TAAAGTTCTGACCAACCCCT+TGG | 0.570035 | 1.2:+77717947 | None:intergenic |
AGTTCAATACTTGCATCCTA+AGG | 0.578655 | 1.2:-77718004 | MS.gene071662:CDS |
GTTTGTGTCTTACTCAGGTG+GGG | 0.582440 | 1.2:+77718281 | None:intergenic |
CCAATCTTCTCAAGTTAGCA+AGG | 0.583877 | 1.2:-77718113 | MS.gene071662:CDS |
CAATACTTGCATCCTAAGGA+TGG | 0.585635 | 1.2:-77718000 | MS.gene071662:CDS |
AAGACTGAGAGGGTTTGGAT+TGG | 0.585730 | 1.2:+77718377 | None:intergenic |
CTGGTGGTGCAGCCATCATG+AGG | 0.591206 | 1.2:-77718143 | MS.gene071662:CDS |
GAGGGAGGTTTGAGTTGCCG+TGG | 0.592804 | 1.2:+77718479 | None:intergenic |
CCTATAGAGGTTAAGTTCAG+TGG | 0.595489 | 1.2:-77717901 | MS.gene071662:CDS |
AAACCACCTCACAATGGCCA+CGG | 0.601200 | 1.2:-77718496 | None:intergenic |
TTAGGTTTGGGACCAGAGAG+AGG | 0.606251 | 1.2:+77718447 | None:intergenic |
TTTGGGACCAGAGAGAGGAG+GGG | 0.614499 | 1.2:+77718452 | None:intergenic |
GGTGCAGCCATCATGAGGGA+AGG | 0.635464 | 1.2:-77718138 | MS.gene071662:CDS |
TTGTGAGCCTAAGACTGAGA+GGG | 0.636675 | 1.2:+77718367 | None:intergenic |
ATGATGGCTGCACCACCAGT+AGG | 0.647307 | 1.2:+77718147 | None:intergenic |
TTTACGCAAAGCCCAAGTTG+AGG | 0.649694 | 1.2:-77718220 | MS.gene071662:CDS |
CTATAGAGTGTTTCCCAATG+GGG | 0.656977 | 1.2:-77718028 | MS.gene071662:CDS |
AGTGAACCCGGGTCGCCAAG+GGG | 0.658596 | 1.2:-77717962 | MS.gene071662:CDS |
ATCTTTGAAATGCCTACTGG+TGG | 0.664160 | 1.2:-77718159 | MS.gene071662:CDS |
TGTTACTGAGGAAGCAACAG+AGG | 0.671184 | 1.2:-77718319 | MS.gene071662:CDS |
TGGTGGTGCAGCCATCATGA+GGG | 0.675901 | 1.2:-77718142 | MS.gene071662:CDS |
ATTGTGAGCCTAAGACTGAG+AGG | 0.683773 | 1.2:+77718366 | None:intergenic |
TACCCAGAGAAAGTGAACCC+GGG | 0.686978 | 1.2:-77717973 | MS.gene071662:CDS |
ATGACCGTATCTCTGTACCA+TGG | 0.695290 | 1.2:-77718425 | MS.gene071662:CDS |
GGATTGGTGAAGGACAATGT+GGG | 0.717553 | 1.2:+77718393 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTCAAAGATTTGTTCTTT+TGG | + | chr1.2:77718194-77718213 | None:intergenic | 20.0% |
! | TACATAAAATTCCTCAACTT+GGG | + | chr1.2:77718156-77718175 | None:intergenic | 25.0% |
! | TTACATAAAATTCCTCAACT+TGG | + | chr1.2:77718157-77718176 | None:intergenic | 25.0% |
!! | AGGAATTTTATGTAATCACA+TGG | - | chr1.2:77718162-77718181 | MS.gene071662:CDS | 25.0% |
!! | GGAATTTTATGTAATCACAT+GGG | - | chr1.2:77718163-77718182 | MS.gene071662:CDS | 25.0% |
TAAGAATGTTAGTCCTATAG+AGG | - | chr1.2:77718448-77718467 | MS.gene071662:CDS | 30.0% | |
AGCAAGGAAAGAACAATGTT+TGG | - | chr1.2:77718265-77718284 | MS.gene071662:intron | 35.0% | |
AGTTCAATACTTGCATCCTA+AGG | - | chr1.2:77718358-77718377 | MS.gene071662:CDS | 35.0% | |
CAAAACAACAACTGTTACTG+AGG | - | chr1.2:77718031-77718050 | MS.gene071662:CDS | 35.0% | |
CTTGCTAACTTGAGAAGATT+GGG | + | chr1.2:77718251-77718270 | None:intergenic | 35.0% | |
TGGGAAACACTCTATAGAAT+TGG | + | chr1.2:77718331-77718350 | None:intergenic | 35.0% | |
! | TCTATAGAGTGTTTCCCAAT+GGG | - | chr1.2:77718333-77718352 | MS.gene071662:CDS | 35.0% |
! | TTCTATAGAGTGTTTCCCAA+TGG | - | chr1.2:77718332-77718351 | MS.gene071662:CDS | 35.0% |
!! | AAAGAACAATGTTTGGCTCT+TGG | - | chr1.2:77718272-77718291 | MS.gene071662:intron | 35.0% |
!! | AAGTATTGAACTTCCCCATT+GGG | + | chr1.2:77718350-77718369 | None:intergenic | 35.0% |
!! | CAAATCTTTGAAATGCCTAC+TGG | - | chr1.2:77718200-77718219 | MS.gene071662:CDS | 35.0% |
AATGTGGGTGATTGTTTCCA+TGG | + | chr1.2:77717957-77717976 | None:intergenic | 40.0% | |
AGAGATACGGTCATTAGGTT+TGG | + | chr1.2:77717931-77717950 | None:intergenic | 40.0% | |
AGTACTGCCACTGAAAATTG+GGG | + | chr1.2:77718114-77718133 | None:intergenic | 40.0% | |
ATGTTTGTGTCTTACTCAGG+TGG | + | chr1.2:77718086-77718105 | None:intergenic | 40.0% | |
CAATACTTGCATCCTAAGGA+TGG | - | chr1.2:77718362-77718381 | MS.gene071662:CDS | 40.0% | |
CAGTACTGCCACTGAAAATT+GGG | + | chr1.2:77718115-77718134 | None:intergenic | 40.0% | |
CCAATCTTCTCAAGTTAGCA+AGG | - | chr1.2:77718249-77718268 | MS.gene071662:intron | 40.0% | |
CCACTGAACTTAACCTCTAT+AGG | + | chr1.2:77718464-77718483 | None:intergenic | 40.0% | |
CCTATAGAGGTTAAGTTCAG+TGG | - | chr1.2:77718461-77718480 | MS.gene071662:CDS | 40.0% | |
CCTTGCTAACTTGAGAAGAT+TGG | + | chr1.2:77718252-77718271 | None:intergenic | 40.0% | |
GAGATACGGTCATTAGGTTT+GGG | + | chr1.2:77717930-77717949 | None:intergenic | 40.0% | |
GGAATGTTTGTGTCTTACTC+AGG | + | chr1.2:77718089-77718108 | None:intergenic | 40.0% | |
GGTCAGAACTTTAGGTCTAT+TGG | - | chr1.2:77718425-77718444 | MS.gene071662:CDS | 40.0% | |
GTTTCCATGGTACAGAGATA+CGG | + | chr1.2:77717944-77717963 | None:intergenic | 40.0% | |
TGTTTGTGTCTTACTCAGGT+GGG | + | chr1.2:77718085-77718104 | None:intergenic | 40.0% | |
! | CTATAGAGTGTTTCCCAATG+GGG | - | chr1.2:77718334-77718353 | MS.gene071662:CDS | 40.0% |
!! | ATCTTTGAAATGCCTACTGG+TGG | - | chr1.2:77718203-77718222 | MS.gene071662:CDS | 40.0% |
!! | CAAGTATTGAACTTCCCCAT+TGG | + | chr1.2:77718351-77718370 | None:intergenic | 40.0% |
AAGACTGAGAGGGTTTGGAT+TGG | + | chr1.2:77717988-77718007 | None:intergenic | 45.0% | |
ATCCAAACCCTCTCAGTCTT+AGG | - | chr1.2:77717988-77718007 | MS.gene071662:CDS | 45.0% | |
ATGACCGTATCTCTGTACCA+TGG | - | chr1.2:77717937-77717956 | MS.gene071662:CDS | 45.0% | |
ATTGTGAGCCTAAGACTGAG+AGG | + | chr1.2:77717999-77718018 | None:intergenic | 45.0% | |
CAACTTGGGCTTTGCGTAAA+AGG | + | chr1.2:77718142-77718161 | None:intergenic | 45.0% | |
CCAGTACTGCCACTGAAAAT+TGG | + | chr1.2:77718116-77718135 | None:intergenic | 45.0% | |
GGTACAGAGATACGGTCATT+AGG | + | chr1.2:77717936-77717955 | None:intergenic | 45.0% | |
GTTTGTGTCTTACTCAGGTG+GGG | + | chr1.2:77718084-77718103 | None:intergenic | 45.0% | |
TGGCTCTTGGAACTACATTG+AGG | - | chr1.2:77718285-77718304 | MS.gene071662:intron | 45.0% | |
TGTTACTGAGGAAGCAACAG+AGG | - | chr1.2:77718043-77718062 | MS.gene071662:CDS | 45.0% | |
TTGTGAGCCTAAGACTGAGA+GGG | + | chr1.2:77717998-77718017 | None:intergenic | 45.0% | |
TTTACGCAAAGCCCAAGTTG+AGG | - | chr1.2:77718142-77718161 | MS.gene071662:CDS | 45.0% | |
! | ATTCCCTCCCCAATTTTCAG+TGG | - | chr1.2:77718104-77718123 | MS.gene071662:CDS | 45.0% |
! | CCAATTTTCAGTGGCAGTAC+TGG | - | chr1.2:77718113-77718132 | MS.gene071662:CDS | 45.0% |
! | GGATTGGTGAAGGACAATGT+GGG | + | chr1.2:77717972-77717991 | None:intergenic | 45.0% |
! | TAAAGTTCTGACCAACCCCT+TGG | + | chr1.2:77718418-77718437 | None:intergenic | 45.0% |
!! | AAGGGGTTGGTCAGAACTTT+AGG | - | chr1.2:77718417-77718436 | MS.gene071662:CDS | 45.0% |
!! | ATTTTCAGTGGCAGTACTGG+AGG | - | chr1.2:77718116-77718135 | MS.gene071662:CDS | 45.0% |
!! | TGGATTGGTGAAGGACAATG+TGG | + | chr1.2:77717973-77717992 | None:intergenic | 45.0% |
ACTGCCACTGAAAATTGGGG+AGG | + | chr1.2:77718111-77718130 | None:intergenic | 50.0% | |
AGCCTAAGACTGAGAGGGTT+TGG | + | chr1.2:77717993-77718012 | None:intergenic | 50.0% | |
ATTGGGACCTTCCCTCATGA+TGG | + | chr1.2:77718234-77718253 | None:intergenic | 50.0% | |
CTGCCACTGAAAATTGGGGA+GGG | + | chr1.2:77718110-77718129 | None:intergenic | 50.0% | |
GTACCCAGAGAAAGTGAACC+CGG | - | chr1.2:77718388-77718407 | MS.gene071662:CDS | 50.0% | |
TACCCAGAGAAAGTGAACCC+GGG | - | chr1.2:77718389-77718408 | MS.gene071662:CDS | 50.0% | |
TCTGGGTACACACCATCCTT+AGG | + | chr1.2:77718377-77718396 | None:intergenic | 50.0% | |
! | TTAGGTTTGGGACCAGAGAG+AGG | + | chr1.2:77717918-77717937 | None:intergenic | 50.0% |
!! | GAAGCAACAGAGGCACCAAT+TGG | - | chr1.2:77718053-77718072 | MS.gene071662:CDS | 50.0% |
!! | GAGAGGGTTTGGATTGGTGA+AGG | + | chr1.2:77717982-77718001 | None:intergenic | 50.0% |
AGAGAGAGGAGGGGTGAAGA+GGG | + | chr1.2:77717904-77717923 | None:intergenic | 55.0% | |
ATGATGGCTGCACCACCAGT+AGG | + | chr1.2:77718218-77718237 | None:intergenic | 55.0% | |
GACCCGGGTTCACTTTCTCT+GGG | + | chr1.2:77718394-77718413 | None:intergenic | 55.0% | |
TCAGGTGGGGTGAAGCCAAT+TGG | + | chr1.2:77718071-77718090 | None:intergenic | 55.0% | |
! | GTTTGGGACCAGAGAGAGGA+GGG | + | chr1.2:77717914-77717933 | None:intergenic | 55.0% |
! | TGGTGGTGCAGCCATCATGA+GGG | - | chr1.2:77718220-77718239 | MS.gene071662:CDS | 55.0% |
! | TTTGGGACCAGAGAGAGGAG+GGG | + | chr1.2:77717913-77717932 | None:intergenic | 55.0% |
AAAGTGAACCCGGGTCGCCA+AGG | - | chr1.2:77718398-77718417 | MS.gene071662:CDS | 60.0% | |
AAGTGAACCCGGGTCGCCAA+GGG | - | chr1.2:77718399-77718418 | MS.gene071662:CDS | 60.0% | |
CAGAGAGAGGAGGGGTGAAG+AGG | + | chr1.2:77717905-77717924 | None:intergenic | 60.0% | |
CGACCCGGGTTCACTTTCTC+TGG | + | chr1.2:77718395-77718414 | None:intergenic | 60.0% | |
CTCTTCACCCCTCCTCTCTC+TGG | - | chr1.2:77717903-77717922 | MS.gene071662:CDS | 60.0% | |
GGTGCAGCCATCATGAGGGA+AGG | - | chr1.2:77718224-77718243 | MS.gene071662:CDS | 60.0% | |
! | CTGGTGGTGCAGCCATCATG+AGG | - | chr1.2:77718219-77718238 | MS.gene071662:CDS | 60.0% |
! | GGTTTGGGACCAGAGAGAGG+AGG | + | chr1.2:77717915-77717934 | None:intergenic | 60.0% |
!! | GAGGGAGGTTTGAGTTGCCG+TGG | + | chr1.2:77717886-77717905 | None:intergenic | 60.0% |
AGTGAACCCGGGTCGCCAAG+GGG | - | chr1.2:77718400-77718419 | MS.gene071662:CDS | 65.0% | |
GAGAGGAGGGGTGAAGAGGG+AGG | + | chr1.2:77717901-77717920 | None:intergenic | 65.0% | |
TGACCAACCCCTTGGCGACC+CGG | + | chr1.2:77718410-77718429 | None:intergenic | 65.0% | |
AACCCGGGTCGCCAAGGGGT+TGG | - | chr1.2:77718404-77718423 | MS.gene071662:CDS | 70.0% | |
GACCAACCCCTTGGCGACCC+GGG | + | chr1.2:77718409-77718428 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 77717879 | 77718505 | 77717879 | ID=MS.gene071662 |
chr1.2 | mRNA | 77717879 | 77718505 | 77717879 | ID=MS.gene071662.t1;Parent=MS.gene071662 |
chr1.2 | exon | 77718294 | 77718505 | 77718294 | ID=MS.gene071662.t1.exon1;Parent=MS.gene071662.t1 |
chr1.2 | CDS | 77718294 | 77718505 | 77718294 | ID=cds.MS.gene071662.t1;Parent=MS.gene071662.t1 |
chr1.2 | exon | 77717879 | 77718260 | 77717879 | ID=MS.gene071662.t1.exon2;Parent=MS.gene071662.t1 |
chr1.2 | CDS | 77717879 | 77718260 | 77717879 | ID=cds.MS.gene071662.t1;Parent=MS.gene071662.t1 |
Gene Sequence |
Protein sequence |