Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071662.t1 | TKY51141.1 | 78.4 | 208 | 34 | 1 | 1 | 197 | 1 | 208 | 3.90E-85 | 324.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071662.t1 | P32869 | 75.0 | 208 | 40 | 2 | 1 | 197 | 1 | 207 | 3.4e-82 | 305.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071662.t1 | T2DMR3 | 78.8 | 208 | 32 | 2 | 1 | 197 | 1 | 207 | 4.7e-85 | 323.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene071662 | 0.80188 | 7.31E-49 | -1.69E-46 |
| MS.gene049232 | MS.gene071662 | 0.810407 | 1.17E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene071662 | 0.820891 | 5.40E-53 | -1.69E-46 |
| MS.gene050581 | MS.gene071662 | 0.816617 | 5.04E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene071662 | 0.810455 | 1.14E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene071662 | 0.807699 | 4.45E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene071662 | 0.815557 | 8.70E-52 | -1.69E-46 |
| MS.gene051564 | MS.gene071662 | 0.803497 | 3.39E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene071662 | 0.850047 | 2.19E-60 | -1.69E-46 |
| MS.gene053018 | MS.gene071662 | 0.814568 | 1.44E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene071662 | 0.823635 | 1.25E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene071662 | 0.823014 | 1.74E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene071662 | 0.806505 | 7.96E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene071662 | 0.80143 | 9.04E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene071662 | 0.811637 | 6.34E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene071662 | 0.834354 | 3.15E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene071662 | 0.819035 | 1.43E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene071662 | 0.838117 | 3.48E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene071662 | 0.817139 | 3.85E-52 | -1.69E-46 |
| MS.gene056942 | MS.gene071662 | 0.833191 | 6.14E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene071662 | 0.82136 | 4.21E-53 | -1.69E-46 |
| MS.gene060356 | MS.gene071662 | 0.839458 | 1.57E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene071662 | 0.824965 | 6.07E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene071662 | 0.831306 | 1.80E-55 | -1.69E-46 |
| MS.gene061171 | MS.gene071662 | 0.808558 | 2.92E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene071662 | 0.822135 | 2.79E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071662.t1 | MTR_1g104630 | 79.899 | 199 | 32 | 3 | 1 | 197 | 1 | 193 | 1.65e-109 | 311 |
| MS.gene071662.t1 | MTR_5g006130 | 70.833 | 216 | 37 | 3 | 1 | 197 | 1 | 209 | 1.18e-102 | 295 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071662.t1 | AT1G03130 | 75.145 | 173 | 30 | 2 | 38 | 197 | 32 | 204 | 2.77e-88 | 258 |
| MS.gene071662.t1 | AT4G02770 | 73.864 | 176 | 30 | 2 | 38 | 197 | 33 | 208 | 5.39e-87 | 255 |
Find 74 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTGGGCTTTGCGTAAA+AGG | 0.172350 | 1.2:+77718223 | None:intergenic |
| CGACCCGGGTTCACTTTCTC+TGG | 0.253150 | 1.2:+77717970 | None:intergenic |
| AAGGGGTTGGTCAGAACTTT+AGG | 0.293589 | 1.2:-77717945 | MS.gene071662:CDS |
| ATTTCAAAGATTTGTTCTTT+TGG | 0.302487 | 1.2:+77718171 | None:intergenic |
| CCTTGCTAACTTGAGAAGAT+TGG | 0.306141 | 1.2:+77718113 | None:intergenic |
| GGTCAGAACTTTAGGTCTAT+TGG | 0.344103 | 1.2:-77717937 | MS.gene071662:CDS |
| AGCCTAAGACTGAGAGGGTT+TGG | 0.354319 | 1.2:+77718372 | None:intergenic |
| AGAGATACGGTCATTAGGTT+TGG | 0.376453 | 1.2:+77718434 | None:intergenic |
| CTCTTCACCCCTCCTCTCTC+TGG | 0.385923 | 1.2:-77718459 | MS.gene071662:CDS |
| AAAGAACAATGTTTGGCTCT+TGG | 0.389124 | 1.2:-77718090 | MS.gene071662:CDS |
| GGTACAGAGATACGGTCATT+AGG | 0.394276 | 1.2:+77718429 | None:intergenic |
| AGCAAGGAAAGAACAATGTT+TGG | 0.394375 | 1.2:-77718097 | MS.gene071662:CDS |
| CTTGCTAACTTGAGAAGATT+GGG | 0.409133 | 1.2:+77718114 | None:intergenic |
| TGGGAAACACTCTATAGAAT+TGG | 0.417334 | 1.2:+77718034 | None:intergenic |
| CCACTGAACTTAACCTCTAT+AGG | 0.417689 | 1.2:+77717901 | None:intergenic |
| GAGATACGGTCATTAGGTTT+GGG | 0.426468 | 1.2:+77718435 | None:intergenic |
| TCTGGGTACACACCATCCTT+AGG | 0.434810 | 1.2:+77717988 | None:intergenic |
| TGACCAACCCCTTGGCGACC+CGG | 0.439253 | 1.2:+77717955 | None:intergenic |
| TCTATAGAGTGTTTCCCAAT+GGG | 0.441504 | 1.2:-77718029 | MS.gene071662:CDS |
| AGAGAGAGGAGGGGTGAAGA+GGG | 0.442080 | 1.2:+77718461 | None:intergenic |
| ATCCAAACCCTCTCAGTCTT+AGG | 0.461548 | 1.2:-77718374 | MS.gene071662:CDS |
| AAGTATTGAACTTCCCCATT+GGG | 0.462594 | 1.2:+77718015 | None:intergenic |
| TACATAAAATTCCTCAACTT+GGG | 0.465412 | 1.2:+77718209 | None:intergenic |
| TAAGAATGTTAGTCCTATAG+AGG | 0.473752 | 1.2:-77717914 | MS.gene071662:CDS |
| GTTTGGGACCAGAGAGAGGA+GGG | 0.477785 | 1.2:+77718451 | None:intergenic |
| CAGAGAGAGGAGGGGTGAAG+AGG | 0.479426 | 1.2:+77718460 | None:intergenic |
| CAAATCTTTGAAATGCCTAC+TGG | 0.482126 | 1.2:-77718162 | MS.gene071662:CDS |
| ATGTTTGTGTCTTACTCAGG+TGG | 0.482467 | 1.2:+77718279 | None:intergenic |
| GACCCGGGTTCACTTTCTCT+GGG | 0.486087 | 1.2:+77717971 | None:intergenic |
| GAGAGGAGGGGTGAAGAGGG+AGG | 0.499448 | 1.2:+77718464 | None:intergenic |
| AAAGTGAACCCGGGTCGCCA+AGG | 0.500800 | 1.2:-77717964 | MS.gene071662:CDS |
| TTACATAAAATTCCTCAACT+TGG | 0.508639 | 1.2:+77718208 | None:intergenic |
| TCAGGTGGGGTGAAGCCAAT+TGG | 0.510396 | 1.2:+77718294 | None:intergenic |
| GAAGCAACAGAGGCACCAAT+TGG | 0.510520 | 1.2:-77718309 | MS.gene071662:CDS |
| AACCCGGGTCGCCAAGGGGT+TGG | 0.516971 | 1.2:-77717958 | MS.gene071662:CDS |
| GACCAACCCCTTGGCGACCC+GGG | 0.524362 | 1.2:+77717956 | None:intergenic |
| AATGTGGGTGATTGTTTCCA+TGG | 0.524862 | 1.2:+77718408 | None:intergenic |
| TTCTATAGAGTGTTTCCCAA+TGG | 0.534519 | 1.2:-77718030 | MS.gene071662:CDS |
| CAAGTATTGAACTTCCCCAT+TGG | 0.539423 | 1.2:+77718014 | None:intergenic |
| TGTTTGTGTCTTACTCAGGT+GGG | 0.540009 | 1.2:+77718280 | None:intergenic |
| TGGATTGGTGAAGGACAATG+TGG | 0.545639 | 1.2:+77718392 | None:intergenic |
| TGGCTCTTGGAACTACATTG+AGG | 0.549525 | 1.2:-77718077 | MS.gene071662:CDS |
| AAGTGAACCCGGGTCGCCAA+GGG | 0.549528 | 1.2:-77717963 | MS.gene071662:CDS |
| GTTTCCATGGTACAGAGATA+CGG | 0.551001 | 1.2:+77718421 | None:intergenic |
| GGTTTGGGACCAGAGAGAGG+AGG | 0.559759 | 1.2:+77718450 | None:intergenic |
| ATTGGGACCTTCCCTCATGA+TGG | 0.564788 | 1.2:+77718131 | None:intergenic |
| GTACCCAGAGAAAGTGAACC+CGG | 0.564935 | 1.2:-77717974 | MS.gene071662:CDS |
| GAGAGGGTTTGGATTGGTGA+AGG | 0.565450 | 1.2:+77718383 | None:intergenic |
| CAAAACAACAACTGTTACTG+AGG | 0.567600 | 1.2:-77718331 | MS.gene071662:CDS |
| TAAAGTTCTGACCAACCCCT+TGG | 0.570035 | 1.2:+77717947 | None:intergenic |
| AGTTCAATACTTGCATCCTA+AGG | 0.578655 | 1.2:-77718004 | MS.gene071662:CDS |
| GTTTGTGTCTTACTCAGGTG+GGG | 0.582440 | 1.2:+77718281 | None:intergenic |
| CCAATCTTCTCAAGTTAGCA+AGG | 0.583877 | 1.2:-77718113 | MS.gene071662:CDS |
| CAATACTTGCATCCTAAGGA+TGG | 0.585635 | 1.2:-77718000 | MS.gene071662:CDS |
| AAGACTGAGAGGGTTTGGAT+TGG | 0.585730 | 1.2:+77718377 | None:intergenic |
| CTGGTGGTGCAGCCATCATG+AGG | 0.591206 | 1.2:-77718143 | MS.gene071662:CDS |
| GAGGGAGGTTTGAGTTGCCG+TGG | 0.592804 | 1.2:+77718479 | None:intergenic |
| CCTATAGAGGTTAAGTTCAG+TGG | 0.595489 | 1.2:-77717901 | MS.gene071662:CDS |
| AAACCACCTCACAATGGCCA+CGG | 0.601200 | 1.2:-77718496 | None:intergenic |
| TTAGGTTTGGGACCAGAGAG+AGG | 0.606251 | 1.2:+77718447 | None:intergenic |
| TTTGGGACCAGAGAGAGGAG+GGG | 0.614499 | 1.2:+77718452 | None:intergenic |
| GGTGCAGCCATCATGAGGGA+AGG | 0.635464 | 1.2:-77718138 | MS.gene071662:CDS |
| TTGTGAGCCTAAGACTGAGA+GGG | 0.636675 | 1.2:+77718367 | None:intergenic |
| ATGATGGCTGCACCACCAGT+AGG | 0.647307 | 1.2:+77718147 | None:intergenic |
| TTTACGCAAAGCCCAAGTTG+AGG | 0.649694 | 1.2:-77718220 | MS.gene071662:CDS |
| CTATAGAGTGTTTCCCAATG+GGG | 0.656977 | 1.2:-77718028 | MS.gene071662:CDS |
| AGTGAACCCGGGTCGCCAAG+GGG | 0.658596 | 1.2:-77717962 | MS.gene071662:CDS |
| ATCTTTGAAATGCCTACTGG+TGG | 0.664160 | 1.2:-77718159 | MS.gene071662:CDS |
| TGTTACTGAGGAAGCAACAG+AGG | 0.671184 | 1.2:-77718319 | MS.gene071662:CDS |
| TGGTGGTGCAGCCATCATGA+GGG | 0.675901 | 1.2:-77718142 | MS.gene071662:CDS |
| ATTGTGAGCCTAAGACTGAG+AGG | 0.683773 | 1.2:+77718366 | None:intergenic |
| TACCCAGAGAAAGTGAACCC+GGG | 0.686978 | 1.2:-77717973 | MS.gene071662:CDS |
| ATGACCGTATCTCTGTACCA+TGG | 0.695290 | 1.2:-77718425 | MS.gene071662:CDS |
| GGATTGGTGAAGGACAATGT+GGG | 0.717553 | 1.2:+77718393 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCAAAGATTTGTTCTTT+TGG | + | chr1.2:77718194-77718213 | None:intergenic | 20.0% |
| ! | TACATAAAATTCCTCAACTT+GGG | + | chr1.2:77718156-77718175 | None:intergenic | 25.0% |
| ! | TTACATAAAATTCCTCAACT+TGG | + | chr1.2:77718157-77718176 | None:intergenic | 25.0% |
| !! | AGGAATTTTATGTAATCACA+TGG | - | chr1.2:77718162-77718181 | MS.gene071662:CDS | 25.0% |
| !! | GGAATTTTATGTAATCACAT+GGG | - | chr1.2:77718163-77718182 | MS.gene071662:CDS | 25.0% |
| TAAGAATGTTAGTCCTATAG+AGG | - | chr1.2:77718448-77718467 | MS.gene071662:CDS | 30.0% | |
| AGCAAGGAAAGAACAATGTT+TGG | - | chr1.2:77718265-77718284 | MS.gene071662:intron | 35.0% | |
| AGTTCAATACTTGCATCCTA+AGG | - | chr1.2:77718358-77718377 | MS.gene071662:CDS | 35.0% | |
| CAAAACAACAACTGTTACTG+AGG | - | chr1.2:77718031-77718050 | MS.gene071662:CDS | 35.0% | |
| CTTGCTAACTTGAGAAGATT+GGG | + | chr1.2:77718251-77718270 | None:intergenic | 35.0% | |
| TGGGAAACACTCTATAGAAT+TGG | + | chr1.2:77718331-77718350 | None:intergenic | 35.0% | |
| ! | TCTATAGAGTGTTTCCCAAT+GGG | - | chr1.2:77718333-77718352 | MS.gene071662:CDS | 35.0% |
| ! | TTCTATAGAGTGTTTCCCAA+TGG | - | chr1.2:77718332-77718351 | MS.gene071662:CDS | 35.0% |
| !! | AAAGAACAATGTTTGGCTCT+TGG | - | chr1.2:77718272-77718291 | MS.gene071662:intron | 35.0% |
| !! | AAGTATTGAACTTCCCCATT+GGG | + | chr1.2:77718350-77718369 | None:intergenic | 35.0% |
| !! | CAAATCTTTGAAATGCCTAC+TGG | - | chr1.2:77718200-77718219 | MS.gene071662:CDS | 35.0% |
| AATGTGGGTGATTGTTTCCA+TGG | + | chr1.2:77717957-77717976 | None:intergenic | 40.0% | |
| AGAGATACGGTCATTAGGTT+TGG | + | chr1.2:77717931-77717950 | None:intergenic | 40.0% | |
| AGTACTGCCACTGAAAATTG+GGG | + | chr1.2:77718114-77718133 | None:intergenic | 40.0% | |
| ATGTTTGTGTCTTACTCAGG+TGG | + | chr1.2:77718086-77718105 | None:intergenic | 40.0% | |
| CAATACTTGCATCCTAAGGA+TGG | - | chr1.2:77718362-77718381 | MS.gene071662:CDS | 40.0% | |
| CAGTACTGCCACTGAAAATT+GGG | + | chr1.2:77718115-77718134 | None:intergenic | 40.0% | |
| CCAATCTTCTCAAGTTAGCA+AGG | - | chr1.2:77718249-77718268 | MS.gene071662:intron | 40.0% | |
| CCACTGAACTTAACCTCTAT+AGG | + | chr1.2:77718464-77718483 | None:intergenic | 40.0% | |
| CCTATAGAGGTTAAGTTCAG+TGG | - | chr1.2:77718461-77718480 | MS.gene071662:CDS | 40.0% | |
| CCTTGCTAACTTGAGAAGAT+TGG | + | chr1.2:77718252-77718271 | None:intergenic | 40.0% | |
| GAGATACGGTCATTAGGTTT+GGG | + | chr1.2:77717930-77717949 | None:intergenic | 40.0% | |
| GGAATGTTTGTGTCTTACTC+AGG | + | chr1.2:77718089-77718108 | None:intergenic | 40.0% | |
| GGTCAGAACTTTAGGTCTAT+TGG | - | chr1.2:77718425-77718444 | MS.gene071662:CDS | 40.0% | |
| GTTTCCATGGTACAGAGATA+CGG | + | chr1.2:77717944-77717963 | None:intergenic | 40.0% | |
| TGTTTGTGTCTTACTCAGGT+GGG | + | chr1.2:77718085-77718104 | None:intergenic | 40.0% | |
| ! | CTATAGAGTGTTTCCCAATG+GGG | - | chr1.2:77718334-77718353 | MS.gene071662:CDS | 40.0% |
| !! | ATCTTTGAAATGCCTACTGG+TGG | - | chr1.2:77718203-77718222 | MS.gene071662:CDS | 40.0% |
| !! | CAAGTATTGAACTTCCCCAT+TGG | + | chr1.2:77718351-77718370 | None:intergenic | 40.0% |
| AAGACTGAGAGGGTTTGGAT+TGG | + | chr1.2:77717988-77718007 | None:intergenic | 45.0% | |
| ATCCAAACCCTCTCAGTCTT+AGG | - | chr1.2:77717988-77718007 | MS.gene071662:CDS | 45.0% | |
| ATGACCGTATCTCTGTACCA+TGG | - | chr1.2:77717937-77717956 | MS.gene071662:CDS | 45.0% | |
| ATTGTGAGCCTAAGACTGAG+AGG | + | chr1.2:77717999-77718018 | None:intergenic | 45.0% | |
| CAACTTGGGCTTTGCGTAAA+AGG | + | chr1.2:77718142-77718161 | None:intergenic | 45.0% | |
| CCAGTACTGCCACTGAAAAT+TGG | + | chr1.2:77718116-77718135 | None:intergenic | 45.0% | |
| GGTACAGAGATACGGTCATT+AGG | + | chr1.2:77717936-77717955 | None:intergenic | 45.0% | |
| GTTTGTGTCTTACTCAGGTG+GGG | + | chr1.2:77718084-77718103 | None:intergenic | 45.0% | |
| TGGCTCTTGGAACTACATTG+AGG | - | chr1.2:77718285-77718304 | MS.gene071662:intron | 45.0% | |
| TGTTACTGAGGAAGCAACAG+AGG | - | chr1.2:77718043-77718062 | MS.gene071662:CDS | 45.0% | |
| TTGTGAGCCTAAGACTGAGA+GGG | + | chr1.2:77717998-77718017 | None:intergenic | 45.0% | |
| TTTACGCAAAGCCCAAGTTG+AGG | - | chr1.2:77718142-77718161 | MS.gene071662:CDS | 45.0% | |
| ! | ATTCCCTCCCCAATTTTCAG+TGG | - | chr1.2:77718104-77718123 | MS.gene071662:CDS | 45.0% |
| ! | CCAATTTTCAGTGGCAGTAC+TGG | - | chr1.2:77718113-77718132 | MS.gene071662:CDS | 45.0% |
| ! | GGATTGGTGAAGGACAATGT+GGG | + | chr1.2:77717972-77717991 | None:intergenic | 45.0% |
| ! | TAAAGTTCTGACCAACCCCT+TGG | + | chr1.2:77718418-77718437 | None:intergenic | 45.0% |
| !! | AAGGGGTTGGTCAGAACTTT+AGG | - | chr1.2:77718417-77718436 | MS.gene071662:CDS | 45.0% |
| !! | ATTTTCAGTGGCAGTACTGG+AGG | - | chr1.2:77718116-77718135 | MS.gene071662:CDS | 45.0% |
| !! | TGGATTGGTGAAGGACAATG+TGG | + | chr1.2:77717973-77717992 | None:intergenic | 45.0% |
| ACTGCCACTGAAAATTGGGG+AGG | + | chr1.2:77718111-77718130 | None:intergenic | 50.0% | |
| AGCCTAAGACTGAGAGGGTT+TGG | + | chr1.2:77717993-77718012 | None:intergenic | 50.0% | |
| ATTGGGACCTTCCCTCATGA+TGG | + | chr1.2:77718234-77718253 | None:intergenic | 50.0% | |
| CTGCCACTGAAAATTGGGGA+GGG | + | chr1.2:77718110-77718129 | None:intergenic | 50.0% | |
| GTACCCAGAGAAAGTGAACC+CGG | - | chr1.2:77718388-77718407 | MS.gene071662:CDS | 50.0% | |
| TACCCAGAGAAAGTGAACCC+GGG | - | chr1.2:77718389-77718408 | MS.gene071662:CDS | 50.0% | |
| TCTGGGTACACACCATCCTT+AGG | + | chr1.2:77718377-77718396 | None:intergenic | 50.0% | |
| ! | TTAGGTTTGGGACCAGAGAG+AGG | + | chr1.2:77717918-77717937 | None:intergenic | 50.0% |
| !! | GAAGCAACAGAGGCACCAAT+TGG | - | chr1.2:77718053-77718072 | MS.gene071662:CDS | 50.0% |
| !! | GAGAGGGTTTGGATTGGTGA+AGG | + | chr1.2:77717982-77718001 | None:intergenic | 50.0% |
| AGAGAGAGGAGGGGTGAAGA+GGG | + | chr1.2:77717904-77717923 | None:intergenic | 55.0% | |
| ATGATGGCTGCACCACCAGT+AGG | + | chr1.2:77718218-77718237 | None:intergenic | 55.0% | |
| GACCCGGGTTCACTTTCTCT+GGG | + | chr1.2:77718394-77718413 | None:intergenic | 55.0% | |
| TCAGGTGGGGTGAAGCCAAT+TGG | + | chr1.2:77718071-77718090 | None:intergenic | 55.0% | |
| ! | GTTTGGGACCAGAGAGAGGA+GGG | + | chr1.2:77717914-77717933 | None:intergenic | 55.0% |
| ! | TGGTGGTGCAGCCATCATGA+GGG | - | chr1.2:77718220-77718239 | MS.gene071662:CDS | 55.0% |
| ! | TTTGGGACCAGAGAGAGGAG+GGG | + | chr1.2:77717913-77717932 | None:intergenic | 55.0% |
| AAAGTGAACCCGGGTCGCCA+AGG | - | chr1.2:77718398-77718417 | MS.gene071662:CDS | 60.0% | |
| AAGTGAACCCGGGTCGCCAA+GGG | - | chr1.2:77718399-77718418 | MS.gene071662:CDS | 60.0% | |
| CAGAGAGAGGAGGGGTGAAG+AGG | + | chr1.2:77717905-77717924 | None:intergenic | 60.0% | |
| CGACCCGGGTTCACTTTCTC+TGG | + | chr1.2:77718395-77718414 | None:intergenic | 60.0% | |
| CTCTTCACCCCTCCTCTCTC+TGG | - | chr1.2:77717903-77717922 | MS.gene071662:CDS | 60.0% | |
| GGTGCAGCCATCATGAGGGA+AGG | - | chr1.2:77718224-77718243 | MS.gene071662:CDS | 60.0% | |
| ! | CTGGTGGTGCAGCCATCATG+AGG | - | chr1.2:77718219-77718238 | MS.gene071662:CDS | 60.0% |
| ! | GGTTTGGGACCAGAGAGAGG+AGG | + | chr1.2:77717915-77717934 | None:intergenic | 60.0% |
| !! | GAGGGAGGTTTGAGTTGCCG+TGG | + | chr1.2:77717886-77717905 | None:intergenic | 60.0% |
| AGTGAACCCGGGTCGCCAAG+GGG | - | chr1.2:77718400-77718419 | MS.gene071662:CDS | 65.0% | |
| GAGAGGAGGGGTGAAGAGGG+AGG | + | chr1.2:77717901-77717920 | None:intergenic | 65.0% | |
| TGACCAACCCCTTGGCGACC+CGG | + | chr1.2:77718410-77718429 | None:intergenic | 65.0% | |
| AACCCGGGTCGCCAAGGGGT+TGG | - | chr1.2:77718404-77718423 | MS.gene071662:CDS | 70.0% | |
| GACCAACCCCTTGGCGACCC+GGG | + | chr1.2:77718409-77718428 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 77717879 | 77718505 | 77717879 | ID=MS.gene071662 |
| chr1.2 | mRNA | 77717879 | 77718505 | 77717879 | ID=MS.gene071662.t1;Parent=MS.gene071662 |
| chr1.2 | exon | 77718294 | 77718505 | 77718294 | ID=MS.gene071662.t1.exon1;Parent=MS.gene071662.t1 |
| chr1.2 | CDS | 77718294 | 77718505 | 77718294 | ID=cds.MS.gene071662.t1;Parent=MS.gene071662.t1 |
| chr1.2 | exon | 77717879 | 77718260 | 77717879 | ID=MS.gene071662.t1.exon2;Parent=MS.gene071662.t1 |
| chr1.2 | CDS | 77717879 | 77718260 | 77717879 | ID=cds.MS.gene071662.t1;Parent=MS.gene071662.t1 |
| Gene Sequence |
| Protein sequence |