Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073309.t1 | XP_003610062.1 | 87.8 | 384 | 43 | 3 | 5 | 387 | 2 | 382 | 3.60E-196 | 694.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073309.t1 | Q9SW00 | 52.4 | 380 | 173 | 4 | 6 | 384 | 8 | 380 | 1.5e-110 | 401.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073309.t1 | G7JUB4 | 87.8 | 384 | 43 | 3 | 5 | 387 | 2 | 382 | 2.6e-196 | 694.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene073309 | 0.860964 | 1.43E-63 | -1.69E-46 |
| MS.gene050099 | MS.gene073309 | 0.836135 | 1.12E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene073309 | 0.821017 | 5.05E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene073309 | 0.802211 | 6.25E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene073309 | 0.821195 | 4.59E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene073309 | 0.850634 | 1.50E-60 | -1.69E-46 |
| MS.gene052178 | MS.gene073309 | 0.816537 | 5.25E-52 | -1.69E-46 |
| MS.gene052600 | MS.gene073309 | 0.802299 | 5.99E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene073309 | 0.83774 | 4.35E-57 | -1.69E-46 |
| MS.gene05455 | MS.gene073309 | 0.803256 | 3.80E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene073309 | 0.814002 | 1.92E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene073309 | 0.846294 | 2.38E-59 | -1.69E-46 |
| MS.gene055390 | MS.gene073309 | 0.819779 | 9.71E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene073309 | 0.830741 | 2.48E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene073309 | 0.825064 | 5.74E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene073309 | 0.802543 | 5.34E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene073309 | 0.814071 | 1.86E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene073309 | 0.806822 | 6.82E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene073309 | 0.843874 | 1.07E-58 | -1.69E-46 |
| MS.gene058845 | MS.gene073309 | 0.802808 | 4.71E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene073309 | 0.813914 | 2.01E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene073309 | 0.83125 | 1.86E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene073309 | 0.805603 | 1.23E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene073309 | 0.801981 | 6.97E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene073309 | 0.825584 | 4.33E-54 | -1.69E-46 |
| MS.gene060476 | MS.gene073309 | 0.838665 | 2.51E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene073309 | 0.80715 | 5.82E-50 | -1.69E-46 |
| MS.gene061113 | MS.gene073309 | 0.803171 | 3.96E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene032779 | MS.gene073309 | PPI |
| MS.gene066288 | MS.gene073309 | PPI |
| MS.gene99026 | MS.gene073309 | PPI |
| MS.gene073309 | MS.gene49595 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073309.t1 | MTR_4g127510 | 87.760 | 384 | 43 | 3 | 5 | 387 | 2 | 382 | 0.0 | 689 |
| MS.gene073309.t1 | MTR_2g037770 | 68.766 | 381 | 115 | 3 | 7 | 387 | 6 | 382 | 0.0 | 537 |
| MS.gene073309.t1 | MTR_2g037790 | 64.175 | 388 | 132 | 4 | 1 | 387 | 6 | 387 | 8.01e-180 | 505 |
| MS.gene073309.t1 | MTR_2g037790 | 64.175 | 388 | 132 | 4 | 1 | 387 | 3 | 384 | 8.76e-180 | 505 |
| MS.gene073309.t1 | MTR_4g127490 | 62.402 | 383 | 139 | 4 | 5 | 384 | 11 | 391 | 4.10e-170 | 481 |
| MS.gene073309.t1 | MTR_4g127490 | 62.402 | 383 | 139 | 4 | 5 | 384 | 13 | 393 | 4.86e-170 | 481 |
| MS.gene073309.t1 | MTR_2g037770 | 68.421 | 304 | 92 | 3 | 1 | 304 | 1 | 300 | 1.40e-147 | 421 |
| MS.gene073309.t1 | MTR_2g037770 | 69.128 | 298 | 88 | 3 | 7 | 304 | 6 | 299 | 9.65e-147 | 419 |
| MS.gene073309.t1 | MTR_2g037770 | 69.663 | 267 | 77 | 3 | 7 | 273 | 6 | 268 | 3.83e-132 | 379 |
| MS.gene073309.t1 | MTR_4g064110 | 27.035 | 344 | 208 | 12 | 47 | 364 | 78 | 404 | 7.11e-21 | 94.4 |
| MS.gene073309.t1 | MTR_7g061830 | 26.879 | 346 | 206 | 14 | 47 | 364 | 82 | 408 | 9.91e-17 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073309.t1 | AT4G25850 | 52.231 | 381 | 174 | 4 | 6 | 385 | 8 | 381 | 3.13e-136 | 394 |
| MS.gene073309.t1 | AT5G57240 | 50.392 | 383 | 182 | 4 | 5 | 386 | 2 | 377 | 7.78e-136 | 393 |
| MS.gene073309.t1 | AT5G57240 | 50.392 | 383 | 182 | 4 | 5 | 386 | 2 | 377 | 7.78e-136 | 393 |
| MS.gene073309.t1 | AT5G57240 | 50.392 | 383 | 182 | 4 | 5 | 386 | 2 | 377 | 7.78e-136 | 393 |
| MS.gene073309.t1 | AT4G25850 | 52.231 | 381 | 174 | 4 | 6 | 385 | 110 | 483 | 1.98e-134 | 393 |
| MS.gene073309.t1 | AT5G57240 | 47.304 | 408 | 182 | 5 | 5 | 386 | 2 | 402 | 7.39e-130 | 379 |
| MS.gene073309.t1 | AT5G57240 | 47.304 | 408 | 182 | 5 | 5 | 386 | 2 | 402 | 7.39e-130 | 379 |
| MS.gene073309.t1 | AT4G25860 | 49.606 | 381 | 184 | 4 | 6 | 385 | 9 | 382 | 1.01e-126 | 370 |
| MS.gene073309.t1 | AT4G25860 | 49.606 | 381 | 184 | 4 | 6 | 385 | 3 | 376 | 1.70e-126 | 369 |
| MS.gene073309.t1 | AT4G25850 | 53.008 | 266 | 118 | 3 | 6 | 270 | 8 | 267 | 2.33e-90 | 273 |
| MS.gene073309.t1 | AT5G59420 | 26.531 | 343 | 209 | 12 | 47 | 363 | 77 | 402 | 8.67e-18 | 85.1 |
| MS.gene073309.t1 | AT5G02100 | 27.801 | 241 | 144 | 11 | 47 | 275 | 77 | 299 | 3.46e-14 | 73.2 |
Find 102 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAGTCAAAAGGGGAAATT+TGG | 0.145591 | 8.1:-5321171 | MS.gene073309:CDS |
| AGTACTTGCTGTAATGTATT+TGG | 0.169490 | 8.1:+5324551 | None:intergenic |
| ACTACACGACCACAGAAATT+TGG | 0.188123 | 8.1:-5324041 | MS.gene073309:CDS |
| AACAGAATCTGCTCTTGTTT+GGG | 0.210716 | 8.1:-5321290 | MS.gene073309:CDS |
| AGACAATCTTTCTTTGGATT+TGG | 0.216954 | 8.1:-5322020 | MS.gene073309:CDS |
| AGAAATCTGAATAAGAAATT+TGG | 0.242852 | 8.1:+5322125 | None:intergenic |
| CAACAGAATCTGCTCTTGTT+TGG | 0.245208 | 8.1:-5321291 | MS.gene073309:CDS |
| CATATGTCTCTCCATGATTA+TGG | 0.251319 | 8.1:+5322159 | None:intergenic |
| CTGCTACCAGGCCTGTTTCT+AGG | 0.260032 | 8.1:+5322057 | None:intergenic |
| GCTCCCTACAATCCCATTCT+TGG | 0.262230 | 8.1:-5324014 | MS.gene073309:CDS |
| TTCCAATTCCTGGTATTGAT+TGG | 0.273123 | 8.1:-5322103 | MS.gene073309:CDS |
| TACACTAGACAATCTTTCTT+TGG | 0.278088 | 8.1:-5322026 | MS.gene073309:CDS |
| GGAAATCGAAGACGGATAAA+AGG | 0.297030 | 8.1:-5321993 | MS.gene073309:CDS |
| GACAATCTTTCTTTGGATTT+GGG | 0.297690 | 8.1:-5322019 | MS.gene073309:CDS |
| TTCAGATTTCTTCCAATTCC+TGG | 0.299189 | 8.1:-5322113 | MS.gene073309:CDS |
| TTTATAACATTGACGGTCAT+TGG | 0.319680 | 8.1:-5321938 | MS.gene073309:CDS |
| TCCAATTCCTGGTATTGATT+GGG | 0.344320 | 8.1:-5322102 | MS.gene073309:CDS |
| GATCCTTAACAAAAGGAGTA+TGG | 0.346607 | 8.1:+5321514 | None:intergenic |
| ATCTGATCTGTCACGCTTCA+AGG | 0.378726 | 8.1:-5324501 | MS.gene073309:intron |
| TCCCCAATCGTTGCTTATGA+TGG | 0.379990 | 8.1:+5321252 | None:intergenic |
| AGGGTGGCAATAGGAGCATC+TGG | 0.384339 | 8.1:+5321076 | None:intergenic |
| GATCCAGATAAATAATTATA+GGG | 0.385472 | 8.1:+5321057 | None:intergenic |
| ACCCAATCAATACCAGGAAT+TGG | 0.388589 | 8.1:+5322101 | None:intergenic |
| AATAATTATAGGGTGGCAAT+AGG | 0.420289 | 8.1:+5321067 | None:intergenic |
| TGAGTCACTATAAAATGTTT+AGG | 0.424628 | 8.1:+5321145 | None:intergenic |
| TCTCCACTTCCAAAGTTTGT+TGG | 0.426253 | 8.1:-5322372 | MS.gene073309:intron |
| ACTATCCGGTGCCTAGAAAC+AGG | 0.426852 | 8.1:-5322068 | MS.gene073309:CDS |
| AATGTTCTTTATAACATTGA+CGG | 0.438522 | 8.1:-5321945 | MS.gene073309:CDS |
| TTATAACATTGACGGTCATT+GGG | 0.448664 | 8.1:-5321937 | MS.gene073309:CDS |
| ATGGTGGGTTTCACCAAGAA+TGG | 0.451451 | 8.1:+5324001 | None:intergenic |
| TTAGAGAAAGAGAGTCAAAA+GGG | 0.454350 | 8.1:-5321180 | MS.gene073309:CDS |
| AGCCATCATAAGCAACGATT+GGG | 0.455090 | 8.1:-5321254 | MS.gene073309:CDS |
| AGAGTCAAAAGGGGAAATTT+GGG | 0.456782 | 8.1:-5321170 | MS.gene073309:CDS |
| AATCGTTGCTTATGATGGCT+TGG | 0.457816 | 8.1:+5321257 | None:intergenic |
| CTTAGAGAAAGAGAGTCAAA+AGG | 0.461372 | 8.1:-5321181 | MS.gene073309:CDS |
| CCTTAACGTCTTGCTCGAAC+AGG | 0.465737 | 8.1:-5323964 | MS.gene073309:intron |
| TCTTTCTTTGGATTTGGGTC+GGG | 0.467324 | 8.1:-5322014 | MS.gene073309:CDS |
| ATCTTTCTTTGGATTTGGGT+CGG | 0.469873 | 8.1:-5322015 | MS.gene073309:CDS |
| TAAGTCTCTTCAAGAATGTT+CGG | 0.473557 | 8.1:-5324529 | MS.gene073309:CDS |
| ACCTCTAGATCCTTAACAAA+AGG | 0.474417 | 8.1:+5321507 | None:intergenic |
| CAAGTCTACTCCTGTGGCTG+TGG | 0.475561 | 8.1:+5324133 | None:intergenic |
| TACCATTGAAGCTGTGACTT+AGG | 0.485158 | 8.1:+5324173 | None:intergenic |
| TTCACCAAGAATGGGATTGT+AGG | 0.487044 | 8.1:+5324010 | None:intergenic |
| CTCTTCAAGAATGTTCGGTT+AGG | 0.494318 | 8.1:-5324524 | MS.gene073309:CDS |
| GAAACCCACCATGTTTCTAA+AGG | 0.495301 | 8.1:-5323990 | MS.gene073309:CDS |
| AAACCCACCATGTTTCTAAA+GGG | 0.496469 | 8.1:-5323989 | MS.gene073309:CDS |
| TTACCAACAAACTTTGGAAG+TGG | 0.498053 | 8.1:+5322369 | None:intergenic |
| TGGTGGGTTTCACCAAGAAT+GGG | 0.499357 | 8.1:+5324002 | None:intergenic |
| CTCATAGCAATGAAGATGGC+TGG | 0.502171 | 8.1:-5321126 | MS.gene073309:CDS |
| GCAGGTTTCACACCATCCTC+AGG | 0.503834 | 8.1:-5322451 | MS.gene073309:intron |
| CTGTGACTTAGGCATGTTGA+AGG | 0.504962 | 8.1:+5324184 | None:intergenic |
| CCTGTTCGAGCAAGACGTTA+AGG | 0.505938 | 8.1:+5323964 | None:intergenic |
| AAGCCATCATAAGCAACGAT+TGG | 0.513927 | 8.1:-5321255 | MS.gene073309:CDS |
| TCACCAAGAATGGGATTGTA+GGG | 0.514686 | 8.1:+5324011 | None:intergenic |
| CAACTGCACCTCCATAATCA+TGG | 0.525416 | 8.1:-5322170 | MS.gene073309:CDS |
| TGCCTAAGTCACAGCTTCAA+TGG | 0.525691 | 8.1:-5324175 | MS.gene073309:CDS |
| AAGTCACAGCTTCAATGGTA+TGG | 0.534057 | 8.1:-5324170 | MS.gene073309:CDS |
| GGGTTGGCAATGTCACTATC+CGG | 0.534777 | 8.1:-5322082 | MS.gene073309:CDS |
| AACAAATCATCGGATTCTGA+TGG | 0.535295 | 8.1:-5324587 | MS.gene073309:CDS |
| TGTGTCTATTCCACAGCCAC+AGG | 0.535366 | 8.1:-5324143 | MS.gene073309:CDS |
| GAAATCGAAGACGGATAAAA+GGG | 0.537567 | 8.1:-5321992 | MS.gene073309:CDS |
| ACTGTTCACCAATTCAAAAG+TGG | 0.544922 | 8.1:-5321102 | MS.gene073309:CDS |
| ATTCCTGGTATTGATTGGGT+TGG | 0.551107 | 8.1:-5322098 | MS.gene073309:CDS |
| GACTTATATCAGTAGTAGCA+TGG | 0.557193 | 8.1:-5324073 | MS.gene073309:CDS |
| ACAGAATCTGCTCTTGTTTG+GGG | 0.557754 | 8.1:-5321289 | MS.gene073309:CDS |
| ACAAATCATCGGATTCTGAT+GGG | 0.561719 | 8.1:-5324586 | MS.gene073309:CDS |
| ACATTGACGGTCATTGGGAT+AGG | 0.562966 | 8.1:-5321932 | MS.gene073309:intron |
| TGTAGCTCAATTCTGCTACC+AGG | 0.567744 | 8.1:+5322045 | None:intergenic |
| TTTCCATCTGATCAGTGGCA+TGG | 0.571356 | 8.1:+5322418 | None:intergenic |
| CCAGGCCTGTTTCTAGGCAC+CGG | 0.578301 | 8.1:+5322063 | None:intergenic |
| AAATTATAAATGCAGGTACA+GGG | 0.580423 | 8.1:-5322220 | MS.gene073309:intron |
| GTGACTCATAGCAATGAAGA+TGG | 0.582352 | 8.1:-5321130 | MS.gene073309:CDS |
| TAAGGTTCCCTTTAGAAACA+TGG | 0.582927 | 8.1:+5323982 | None:intergenic |
| AATAGACAACAACAAATCAT+CGG | 0.591062 | 8.1:-5324597 | MS.gene073309:CDS |
| ATTCCATGCCACTGATCAGA+TGG | 0.593014 | 8.1:-5322421 | MS.gene073309:CDS |
| GTTTAGCAAGTCTACTCCTG+TGG | 0.609510 | 8.1:+5324127 | None:intergenic |
| TTGTTGTCTATTGTTGCGAG+TGG | 0.612182 | 8.1:+5324608 | None:intergenic |
| CCGGTGCCTAGAAACAGGCC+TGG | 0.615502 | 8.1:-5322063 | MS.gene073309:CDS |
| CTGTTCACCAATTCAAAAGT+GGG | 0.616115 | 8.1:-5321101 | MS.gene073309:CDS |
| GTTCCCTTTAGAAACATGGT+GGG | 0.616437 | 8.1:+5323986 | None:intergenic |
| CAAACAAGAGCAGATTCTGT+TGG | 0.621500 | 8.1:+5321292 | None:intergenic |
| CGATTGGGGAAAAGCAAGAG+AGG | 0.622181 | 8.1:-5321239 | MS.gene073309:CDS |
| TTGCTAAACAACATCAACAA+TGG | 0.626138 | 8.1:-5324113 | MS.gene073309:CDS |
| GGGTGGCAATAGGAGCATCT+GGG | 0.627495 | 8.1:+5321077 | None:intergenic |
| GGTTCCCTTTAGAAACATGG+TGG | 0.629919 | 8.1:+5323985 | None:intergenic |
| GGGGTAGAAGTTGACATGCA+TGG | 0.630449 | 8.1:-5322200 | MS.gene073309:CDS |
| AAGAGAGGCAAAGAACACTC+TGG | 0.634477 | 8.1:-5321224 | MS.gene073309:CDS |
| CAAACTTTGGAAGTGGAGAG+TGG | 0.635431 | 8.1:+5322376 | None:intergenic |
| TTGCCAACCCAATCAATACC+AGG | 0.642684 | 8.1:+5322095 | None:intergenic |
| TTGGGTCGGGAAATCGAAGA+CGG | 0.645859 | 8.1:-5322001 | MS.gene073309:CDS |
| CCAGATAAATAATTATAGGG+TGG | 0.646503 | 8.1:+5321060 | None:intergenic |
| TTAGGCATGTTGAAGGTAGG+TGG | 0.647292 | 8.1:+5324191 | None:intergenic |
| ATGTCTCTCCATGATTATGG+AGG | 0.650308 | 8.1:+5322162 | None:intergenic |
| GCCATCATAAGCAACGATTG+GGG | 0.655456 | 8.1:-5321253 | MS.gene073309:CDS |
| GACTTAGGCATGTTGAAGGT+AGG | 0.658758 | 8.1:+5324188 | None:intergenic |
| AATTATAAATGCAGGTACAG+GGG | 0.662926 | 8.1:-5322219 | MS.gene073309:intron |
| TAGAGAAAGAGAGTCAAAAG+GGG | 0.666484 | 8.1:-5321179 | MS.gene073309:CDS |
| GGAGCAAATCCAAATTTCTG+TGG | 0.677683 | 8.1:+5324032 | None:intergenic |
| AGAGGCAAAGAACACTCTGG+AGG | 0.685308 | 8.1:-5321221 | MS.gene073309:CDS |
| GGAATGCAGATACCTGAGGA+TGG | 0.705504 | 8.1:+5322439 | None:intergenic |
| ACACTCTGGAGGAAACTCAG+AGG | 0.724153 | 8.1:-5321210 | MS.gene073309:CDS |
| GCATGGAATGCAGATACCTG+AGG | 0.732347 | 8.1:+5322435 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTACGTAAATAATATAT+AGG | + | chr8.1:5324147-5324166 | None:intergenic | 10.0% |
| !!! | ATTTAAATTTAAAGTGATAA+TGG | + | chr8.1:5322211-5322230 | None:intergenic | 10.0% |
| !!! | TTTTATTATTATTGATTTTG+AGG | + | chr8.1:5323559-5323578 | None:intergenic | 10.0% |
| !! | AAAAATGAAAAAGGATATAA+AGG | + | chr8.1:5324395-5324414 | None:intergenic | 15.0% |
| !! | AATTGGTCAATAAAAATATA+TGG | + | chr8.1:5321527-5321546 | None:intergenic | 15.0% |
| !! | ACTTAAAATTATAATTCTTG+TGG | - | chr8.1:5322929-5322948 | MS.gene073309:intron | 15.0% |
| !! | ATAAAACAAATTATAAATGC+AGG | - | chr8.1:5323573-5323592 | MS.gene073309:intron | 15.0% |
| !! | CTAGTTAAAGATTAAAAAAA+TGG | + | chr8.1:5322410-5322429 | None:intergenic | 15.0% |
| !! | TCAATAAAAATATATGGATT+AGG | + | chr8.1:5321521-5321540 | None:intergenic | 15.0% |
| !! | TCACATTAAAAAAATGAAAA+AGG | + | chr8.1:5324404-5324423 | None:intergenic | 15.0% |
| !!! | ACAAGAATTATAATTTTAAG+TGG | + | chr8.1:5322930-5322949 | None:intergenic | 15.0% |
| !!! | ATATGATTCAATTTTAGATA+TGG | - | chr8.1:5322879-5322898 | MS.gene073309:intron | 15.0% |
| !!! | ATTTTATATGATTAGGATTT+AGG | + | chr8.1:5324181-5324200 | None:intergenic | 15.0% |
| !!! | TAAAAAGAAAATTTTGTCTT+AGG | - | chr8.1:5322316-5322335 | MS.gene073309:intron | 15.0% |
| !!! | TATTCGATTCTTTTTAATTT+AGG | + | chr8.1:5323202-5323221 | None:intergenic | 15.0% |
| !! | AAATTAATTTCGATACTTCA+TGG | + | chr8.1:5322713-5322732 | None:intergenic | 20.0% |
| !! | AATCTTTAACTAGTATCTTA+AGG | - | chr8.1:5322417-5322436 | MS.gene073309:CDS | 20.0% |
| !! | AATGTTCTTTATAACATTGA+CGG | - | chr8.1:5323855-5323874 | MS.gene073309:intron | 20.0% |
| !! | AATTAATTTCGATACTTCAT+GGG | + | chr8.1:5322712-5322731 | None:intergenic | 20.0% |
| !! | AGAAATCTGAATAAGAAATT+TGG | + | chr8.1:5323678-5323697 | None:intergenic | 20.0% |
| !! | AGATCAAATGTAAATTTCAT+AGG | + | chr8.1:5321422-5321441 | None:intergenic | 20.0% |
| !! | ATATTATATTTGCACATGTT+GGG | + | chr8.1:5323000-5323019 | None:intergenic | 20.0% |
| !! | GAAATGACCAAAATAAATAA+CGG | + | chr8.1:5322189-5322208 | None:intergenic | 20.0% |
| !! | TACTTATTATCTTTGATATG+AGG | - | chr8.1:5322581-5322600 | MS.gene073309:intron | 20.0% |
| !! | TCAAATCCAAATAAATACAT+TGG | + | chr8.1:5321082-5321101 | None:intergenic | 20.0% |
| !! | TGAAATCCAATGTATTTATT+TGG | - | chr8.1:5321073-5321092 | MS.gene073309:CDS | 20.0% |
| !!! | AGATTTTAGGTTCAATTTTA+TGG | + | chr8.1:5322080-5322099 | None:intergenic | 20.0% |
| !!! | AGTTTTGTTCTAACTTTAAA+TGG | + | chr8.1:5322026-5322045 | None:intergenic | 20.0% |
| !!! | ATTATTATTGATTTTGAGGA+TGG | + | chr8.1:5323555-5323574 | None:intergenic | 20.0% |
| !!! | CAGCATTATTTTATATGATT+AGG | + | chr8.1:5324188-5324207 | None:intergenic | 20.0% |
| !!! | TATTTTGCCGTTATTTATTT+TGG | - | chr8.1:5322179-5322198 | MS.gene073309:CDS | 20.0% |
| ! | AAAATGAAAATGTTCATGCA+TGG | - | chr8.1:5324423-5324442 | MS.gene073309:intron | 25.0% |
| ! | AAACAACTAAGTTAAAAGAC+CGG | + | chr8.1:5321919-5321938 | None:intergenic | 25.0% |
| ! | AAATTATAAATGCAGGTACA+GGG | - | chr8.1:5323580-5323599 | MS.gene073309:intron | 25.0% |
| ! | AAATTTACATTTGATCTGCT+GGG | - | chr8.1:5321425-5321444 | MS.gene073309:intron | 25.0% |
| ! | AATAACGGCAAAATACATAA+AGG | + | chr8.1:5322174-5322193 | None:intergenic | 25.0% |
| ! | AATAGACAACAACAAATCAT+CGG | - | chr8.1:5321203-5321222 | MS.gene073309:CDS | 25.0% |
| ! | ATCATATAAAATAATGCTGC+AGG | - | chr8.1:5324189-5324208 | MS.gene073309:CDS | 25.0% |
| ! | ATTATAATTCTTGTGGATGA+AGG | - | chr8.1:5322936-5322955 | MS.gene073309:intron | 25.0% |
| ! | CAACATGTGCAAATATAATA+TGG | - | chr8.1:5322999-5323018 | MS.gene073309:intron | 25.0% |
| ! | CAATATGAAATGTGCTAAAT+AGG | - | chr8.1:5324099-5324118 | MS.gene073309:CDS | 25.0% |
| ! | CATATTATATTTGCACATGT+TGG | + | chr8.1:5323001-5323020 | None:intergenic | 25.0% |
| ! | CCTATCACTTATACAATAAA+GGG | - | chr8.1:5322270-5322289 | MS.gene073309:intron | 25.0% |
| ! | CCTTTATTGTATAAGTGATA+GGG | + | chr8.1:5322272-5322291 | None:intergenic | 25.0% |
| ! | TATTTGTGTATTTGTAATGC+AGG | - | chr8.1:5321146-5321165 | MS.gene073309:CDS | 25.0% |
| ! | TCATATAAAATAATGCTGCA+GGG | - | chr8.1:5324190-5324209 | MS.gene073309:CDS | 25.0% |
| ! | TGAGTCACTATAAAATGTTT+AGG | + | chr8.1:5324658-5324677 | None:intergenic | 25.0% |
| ! | TGTGAAAAATCTAAACTAAC+CGG | - | chr8.1:5321104-5321123 | MS.gene073309:CDS | 25.0% |
| ! | TTAAGATGTATCAACATTGT+AGG | - | chr8.1:5322233-5322252 | MS.gene073309:intron | 25.0% |
| !! | ATAAATGCTTATGCTTTGAA+GGG | - | chr8.1:5322463-5322482 | MS.gene073309:intron | 25.0% |
| !! | CAATACCAAAACATGTTTTT+AGG | - | chr8.1:5324365-5324384 | MS.gene073309:intron | 25.0% |
| !!! | TGCGTTTTTTTCAAGATTTT+AGG | + | chr8.1:5322093-5322112 | None:intergenic | 25.0% |
| !!! | TTAATTTGTTTATACGACCA+TGG | - | chr8.1:5322491-5322510 | MS.gene073309:intron | 25.0% |
| !!! | TTTGTGTTTTGTTTAAAGCT+TGG | - | chr8.1:5321940-5321959 | MS.gene073309:CDS | 25.0% |
| !!! | TTTTGTTTACCAACAAACTT+TGG | + | chr8.1:5323440-5323459 | None:intergenic | 25.0% |
| AAAGACAGTTAAATTTGTGC+AGG | - | chr8.1:5323331-5323350 | MS.gene073309:intron | 30.0% | |
| AACAACTAAGTTAAAAGACC+GGG | + | chr8.1:5321918-5321937 | None:intergenic | 30.0% | |
| AATCTTGAAAAAAACGCACT+CGG | - | chr8.1:5322095-5322114 | MS.gene073309:CDS | 30.0% | |
| AATTATAAATGCAGGTACAG+GGG | - | chr8.1:5323581-5323600 | MS.gene073309:intron | 30.0% | |
| AGACAATCTTTCTTTGGATT+TGG | - | chr8.1:5323780-5323799 | MS.gene073309:intron | 30.0% | |
| AGTTAGAACAAAACTCTGTA+TGG | - | chr8.1:5322031-5322050 | MS.gene073309:CDS | 30.0% | |
| CAAATTATAAATGCAGGTAC+AGG | - | chr8.1:5323579-5323598 | MS.gene073309:intron | 30.0% | |
| CCCTATCACTTATACAATAA+AGG | - | chr8.1:5322269-5322288 | MS.gene073309:intron | 30.0% | |
| CCCTTTATTGTATAAGTGAT+AGG | + | chr8.1:5322273-5322292 | None:intergenic | 30.0% | |
| GAAATTTACATTTGATCTGC+TGG | - | chr8.1:5321424-5321443 | MS.gene073309:intron | 30.0% | |
| GACAATCTTTCTTTGGATTT+GGG | - | chr8.1:5323781-5323800 | MS.gene073309:intron | 30.0% | |
| GATAAATGCTTATGCTTTGA+AGG | - | chr8.1:5322462-5322481 | MS.gene073309:intron | 30.0% | |
| GTATCCTAGAAAAAGATGAA+GGG | - | chr8.1:5322816-5322835 | MS.gene073309:intron | 30.0% | |
| TAAGTCTCTTCAAGAATGTT+CGG | - | chr8.1:5321271-5321290 | MS.gene073309:CDS | 30.0% | |
| TACACTAGACAATCTTTCTT+TGG | - | chr8.1:5323774-5323793 | MS.gene073309:intron | 30.0% | |
| TTAGAGAAAGAGAGTCAAAA+GGG | - | chr8.1:5324620-5324639 | MS.gene073309:CDS | 30.0% | |
| TTATAACATTGACGGTCATT+GGG | - | chr8.1:5323863-5323882 | MS.gene073309:intron | 30.0% | |
| TTGCTAAACAACATCAACAA+TGG | - | chr8.1:5321687-5321706 | MS.gene073309:intron | 30.0% | |
| TTTATAACATTGACGGTCAT+TGG | - | chr8.1:5323862-5323881 | MS.gene073309:intron | 30.0% | |
| ! | ATTTAGGATACGATACAACT+AGG | + | chr8.1:5323186-5323205 | None:intergenic | 30.0% |
| ! | GATCACCTAAAAACATGTTT+TGG | + | chr8.1:5324373-5324392 | None:intergenic | 30.0% |
| ! | GTATCTTAAGGAAACTTGTT+AGG | - | chr8.1:5322429-5322448 | MS.gene073309:CDS | 30.0% |
| ! | TTTACCCTTCATCTTTTTCT+AGG | + | chr8.1:5322823-5322842 | None:intergenic | 30.0% |
| !! | ACACTCTAAAACAATACATC+AGG | + | chr8.1:5324484-5324503 | None:intergenic | 30.0% |
| !! | AGTACTTGCTGTAATGTATT+TGG | + | chr8.1:5321252-5321271 | None:intergenic | 30.0% |
| !! | ATTCATGCCAACTGTTTTAA+AGG | - | chr8.1:5322120-5322139 | MS.gene073309:CDS | 30.0% |
| !! | CACTCTAAAACAATACATCA+GGG | + | chr8.1:5324483-5324502 | None:intergenic | 30.0% |
| !! | TTCATGCCAACTGTTTTAAA+GGG | - | chr8.1:5322121-5322140 | MS.gene073309:CDS | 30.0% |
| !! | TTTTGAGGATGGAAAAGTTT+TGG | + | chr8.1:5323544-5323563 | None:intergenic | 30.0% |
| !!! | AGATTTTACAAGAAGTGTTC+CGG | + | chr8.1:5321126-5321145 | None:intergenic | 30.0% |
| !!! | ATGCAAAAGAAGTGTTTTCT+GGG | - | chr8.1:5324261-5324280 | MS.gene073309:intron | 30.0% |
| !!! | CAATTTTATGGTGTCGATTT+TGG | + | chr8.1:5322068-5322087 | None:intergenic | 30.0% |
| AACAAATCATCGGATTCTGA+TGG | - | chr8.1:5321213-5321232 | MS.gene073309:CDS | 35.0% | |
| AATTCCACAGCCAATTTATG+GGG | - | chr8.1:5321998-5322017 | MS.gene073309:CDS | 35.0% | |
| ACAAATCATCGGATTCTGAT+GGG | - | chr8.1:5321214-5321233 | MS.gene073309:CDS | 35.0% | |
| ACCTCTAGATCCTTAACAAA+AGG | + | chr8.1:5324296-5324315 | None:intergenic | 35.0% | |
| ACTGTTCACCAATTCAAAAG+TGG | - | chr8.1:5324698-5324717 | MS.gene073309:intron | 35.0% | |
| AGAGTCAAAAGGGGAAATTT+GGG | - | chr8.1:5324630-5324649 | MS.gene073309:CDS | 35.0% | |
| ATCTTTCTTTGGATTTGGGT+CGG | - | chr8.1:5323785-5323804 | MS.gene073309:intron | 35.0% | |
| CAATTCCACAGCCAATTTAT+GGG | - | chr8.1:5321997-5322016 | MS.gene073309:CDS | 35.0% | |
| CATATGTCTCTCCATGATTA+TGG | + | chr8.1:5323644-5323663 | None:intergenic | 35.0% | |
| CCAATAACCGATTAATTCGA+GGG | - | chr8.1:5321971-5321990 | MS.gene073309:CDS | 35.0% | |
| CGTATCCTAGAAAAAGATGA+AGG | - | chr8.1:5322815-5322834 | MS.gene073309:intron | 35.0% | |
| CTGTTCACCAATTCAAAAGT+GGG | - | chr8.1:5324699-5324718 | MS.gene073309:intron | 35.0% | |
| CTTAGAGAAAGAGAGTCAAA+AGG | - | chr8.1:5324619-5324638 | MS.gene073309:CDS | 35.0% | |
| GAAATATCTTTGCGTATCTG+TGG | + | chr8.1:5322777-5322796 | None:intergenic | 35.0% | |
| GAAATCGAAGACGGATAAAA+GGG | - | chr8.1:5323808-5323827 | MS.gene073309:intron | 35.0% | |
| GACTTATATCAGTAGTAGCA+TGG | - | chr8.1:5321727-5321746 | MS.gene073309:intron | 35.0% | |
| GATCCTTAACAAAAGGAGTA+TGG | + | chr8.1:5324289-5324308 | None:intergenic | 35.0% | |
| TAGAGAAAGAGAGTCAAAAG+GGG | - | chr8.1:5324621-5324640 | MS.gene073309:CDS | 35.0% | |
| TCAGGGTAATAGTCACATAT+GGG | - | chr8.1:5322516-5322535 | MS.gene073309:intron | 35.0% | |
| TCCAATAACCGATTAATTCG+AGG | - | chr8.1:5321970-5321989 | MS.gene073309:CDS | 35.0% | |
| TGGAATATCGGTATCTGATA+CGG | + | chr8.1:5322675-5322694 | None:intergenic | 35.0% | |
| TGTCATATCAAGTGTCCATA+CGG | + | chr8.1:5323972-5323991 | None:intergenic | 35.0% | |
| TTAAATGGAGCCCCATAAAT+TGG | + | chr8.1:5322011-5322030 | None:intergenic | 35.0% | |
| TTCAGATTTCTTCCAATTCC+TGG | - | chr8.1:5323687-5323706 | MS.gene073309:intron | 35.0% | |
| TTTCATATTGAAGACGCATC+TGG | + | chr8.1:5324089-5324108 | None:intergenic | 35.0% | |
| ! | AAACCCACCATGTTTCTAAA+GGG | - | chr8.1:5321811-5321830 | MS.gene073309:intron | 35.0% |
| ! | AACAGAATCTGCTCTTGTTT+GGG | - | chr8.1:5324510-5324529 | MS.gene073309:CDS | 35.0% |
| ! | ATTGGTTCCCTCGAATTAAT+CGG | + | chr8.1:5321981-5322000 | None:intergenic | 35.0% |
| ! | TAAGGTTCCCTTTAGAAACA+TGG | + | chr8.1:5321821-5321840 | None:intergenic | 35.0% |
| ! | TATGTTTTCCATCTGATCAG+TGG | + | chr8.1:5323390-5323409 | None:intergenic | 35.0% |
| ! | TCCTTTTGTTAAGGATCTAG+AGG | - | chr8.1:5324292-5324311 | MS.gene073309:intron | 35.0% |
| ! | TTACCAACAAACTTTGGAAG+TGG | + | chr8.1:5323434-5323453 | None:intergenic | 35.0% |
| !! | ATGAGACCCTTTAAAACAGT+TGG | + | chr8.1:5322130-5322149 | None:intergenic | 35.0% |
| !! | CTTTTGACTCTCTTTCTCTA+AGG | + | chr8.1:5324621-5324640 | None:intergenic | 35.0% |
| !! | GCATATATATCAAGCACTGA+CGG | - | chr8.1:5323946-5323965 | MS.gene073309:intron | 35.0% |
| !! | TCCAATTCCTGGTATTGATT+GGG | - | chr8.1:5323698-5323717 | MS.gene073309:intron | 35.0% |
| !! | TTCCAATTCCTGGTATTGAT+TGG | - | chr8.1:5323697-5323716 | MS.gene073309:intron | 35.0% |
| !!! | GATGCAAAAGAAGTGTTTTC+TGG | - | chr8.1:5324260-5324279 | MS.gene073309:intron | 35.0% |
| !!! | TTTATGGTGTCGATTTTGGT+TGG | + | chr8.1:5322064-5322083 | None:intergenic | 35.0% |
| AAAAAACTTGTGGTCCCACT+TGG | + | chr8.1:5321890-5321909 | None:intergenic | 40.0% | |
| AAGCCATCATAAGCAACGAT+TGG | - | chr8.1:5324545-5324564 | MS.gene073309:CDS | 40.0% | |
| AAGTCACAGCTTCAATGGTA+TGG | - | chr8.1:5321630-5321649 | MS.gene073309:intron | 40.0% | |
| AATCGTTGCTTATGATGGCT+TGG | + | chr8.1:5324546-5324565 | None:intergenic | 40.0% | |
| ACCCAATCAATACCAGGAAT+TGG | + | chr8.1:5323702-5323721 | None:intergenic | 40.0% | |
| ACCGATATTCCACAGATAGT+CGG | - | chr8.1:5322683-5322702 | MS.gene073309:intron | 40.0% | |
| ACTACACGACCACAGAAATT+TGG | - | chr8.1:5321759-5321778 | MS.gene073309:intron | 40.0% | |
| ACTTCTCAGCATATAGTGTG+CGG | - | chr8.1:5321479-5321498 | MS.gene073309:intron | 40.0% | |
| AGCCATCATAAGCAACGATT+GGG | - | chr8.1:5324546-5324565 | MS.gene073309:CDS | 40.0% | |
| ATCTGGTATCCGACATTGAT+AGG | + | chr8.1:5324072-5324091 | None:intergenic | 40.0% | |
| ATGTCTCTCCATGATTATGG+AGG | + | chr8.1:5323641-5323660 | None:intergenic | 40.0% | |
| CAAACAAGAGCAGATTCTGT+TGG | + | chr8.1:5324511-5324530 | None:intergenic | 40.0% | |
| CAACAGAATCTGCTCTTGTT+TGG | - | chr8.1:5324509-5324528 | MS.gene073309:CDS | 40.0% | |
| CCAATTCCACAGCCAATTTA+TGG | - | chr8.1:5321996-5322015 | MS.gene073309:CDS | 40.0% | |
| CCATAAATTGGCTGTGGAAT+TGG | + | chr8.1:5321999-5322018 | None:intergenic | 40.0% | |
| CCCTCGAATTAATCGGTTAT+TGG | + | chr8.1:5321974-5321993 | None:intergenic | 40.0% | |
| CTCTTCAAGAATGTTCGGTT+AGG | - | chr8.1:5321276-5321295 | MS.gene073309:CDS | 40.0% | |
| GAGAGTCAAAAGGGGAAATT+TGG | - | chr8.1:5324629-5324648 | MS.gene073309:CDS | 40.0% | |
| GGAAATCGAAGACGGATAAA+AGG | - | chr8.1:5323807-5323826 | MS.gene073309:intron | 40.0% | |
| GGAATATCGGTATCTGATAC+GGG | + | chr8.1:5322674-5322693 | None:intergenic | 40.0% | |
| GGAGCAAATCCAAATTTCTG+TGG | + | chr8.1:5321771-5321790 | None:intergenic | 40.0% | |
| GTCAGGGTAATAGTCACATA+TGG | - | chr8.1:5322515-5322534 | MS.gene073309:intron | 40.0% | |
| GTGACTCATAGCAATGAAGA+TGG | - | chr8.1:5324670-5324689 | MS.gene073309:intron | 40.0% | |
| TACATTTGATCTGCTGGGAT+GGG | - | chr8.1:5321430-5321449 | MS.gene073309:intron | 40.0% | |
| TACCATTGAAGCTGTGACTT+AGG | + | chr8.1:5321630-5321649 | None:intergenic | 40.0% | |
| TCACCAAGAATGGGATTGTA+GGG | + | chr8.1:5321792-5321811 | None:intergenic | 40.0% | |
| TCATGTCCACTCAATAGTGT+TGG | - | chr8.1:5323278-5323297 | MS.gene073309:intron | 40.0% | |
| TCCGACTATCTGTGGAATAT+CGG | + | chr8.1:5322687-5322706 | None:intergenic | 40.0% | |
| TCTCCACTTCCAAAGTTTGT+TGG | - | chr8.1:5323428-5323447 | MS.gene073309:intron | 40.0% | |
| TCTTTCTTTGGATTTGGGTC+GGG | - | chr8.1:5323786-5323805 | MS.gene073309:intron | 40.0% | |
| TGATAGGACAGTGACACATA+TGG | + | chr8.1:5324056-5324075 | None:intergenic | 40.0% | |
| TGCTGAGAAGTGAAGAATTG+CGG | + | chr8.1:5321470-5321489 | None:intergenic | 40.0% | |
| TGTCACTGTCCTATCAATGT+CGG | - | chr8.1:5324060-5324079 | MS.gene073309:CDS | 40.0% | |
| TTACATTTGATCTGCTGGGA+TGG | - | chr8.1:5321429-5321448 | MS.gene073309:intron | 40.0% | |
| TTCACCAAGAATGGGATTGT+AGG | + | chr8.1:5321793-5321812 | None:intergenic | 40.0% | |
| TTGTTGTCTATTGTTGCGAG+TGG | + | chr8.1:5321195-5321214 | None:intergenic | 40.0% | |
| TTTGTGCCAACACTATTGAG+TGG | + | chr8.1:5323287-5323306 | None:intergenic | 40.0% | |
| ! | ACAGAATCTGCTCTTGTTTG+GGG | - | chr8.1:5324511-5324530 | MS.gene073309:CDS | 40.0% |
| ! | GAAACCCACCATGTTTCTAA+AGG | - | chr8.1:5321810-5321829 | MS.gene073309:intron | 40.0% |
| ! | GCTCCATACTCCTTTTGTTA+AGG | - | chr8.1:5324283-5324302 | MS.gene073309:intron | 40.0% |
| ! | GTTCCCTTTAGAAACATGGT+GGG | + | chr8.1:5321817-5321836 | None:intergenic | 40.0% |
| !! | ATTCCTGGTATTGATTGGGT+TGG | - | chr8.1:5323702-5323721 | MS.gene073309:intron | 40.0% |
| AAGAGAGGCAAAGAACACTC+TGG | - | chr8.1:5324576-5324595 | MS.gene073309:CDS | 45.0% | |
| ACATTGACGGTCATTGGGAT+AGG | - | chr8.1:5323868-5323887 | MS.gene073309:intron | 45.0% | |
| ATACGGGTACGATACATACG+GGG | + | chr8.1:5323232-5323251 | None:intergenic | 45.0% | |
| ATCTGATCTGTCACGCTTCA+AGG | - | chr8.1:5321299-5321318 | MS.gene073309:CDS | 45.0% | |
| ATTCCATGCCACTGATCAGA+TGG | - | chr8.1:5323379-5323398 | MS.gene073309:intron | 45.0% | |
| CAACTGCACCTCCATAATCA+TGG | - | chr8.1:5323630-5323649 | MS.gene073309:intron | 45.0% | |
| CCACTTGGAACACGAACAAT+GGG | + | chr8.1:5321875-5321894 | None:intergenic | 45.0% | |
| CCATTGTTCGTGTTCCAAGT+GGG | - | chr8.1:5321873-5321892 | MS.gene073309:intron | 45.0% | |
| CTCATAGCAATGAAGATGGC+TGG | - | chr8.1:5324674-5324693 | MS.gene073309:intron | 45.0% | |
| CTGTGACTTAGGCATGTTGA+AGG | + | chr8.1:5321619-5321638 | None:intergenic | 45.0% | |
| GACTTAGGCATGTTGAAGGT+AGG | + | chr8.1:5321615-5321634 | None:intergenic | 45.0% | |
| GATACGGGTACGATACATAC+GGG | + | chr8.1:5323233-5323252 | None:intergenic | 45.0% | |
| GCCATCATAAGCAACGATTG+GGG | - | chr8.1:5324547-5324566 | MS.gene073309:CDS | 45.0% | |
| GCTGAGAAGTGAAGAATTGC+GGG | + | chr8.1:5321469-5321488 | None:intergenic | 45.0% | |
| GGAACACGAACAATGGGAAA+AGG | + | chr8.1:5321869-5321888 | None:intergenic | 45.0% | |
| GGATACGGGTACGATACATA+CGG | + | chr8.1:5323234-5323253 | None:intergenic | 45.0% | |
| GTATGTATCGTACCCGTATC+CGG | - | chr8.1:5323233-5323252 | MS.gene073309:intron | 45.0% | |
| GTTTAGCAAGTCTACTCCTG+TGG | + | chr8.1:5321676-5321695 | None:intergenic | 45.0% | |
| TATGTATCGTACCCGTATCC+GGG | - | chr8.1:5323234-5323253 | MS.gene073309:intron | 45.0% | |
| TCCCCAATCGTTGCTTATGA+TGG | + | chr8.1:5324551-5324570 | None:intergenic | 45.0% | |
| TGAGGAAATCCACTCAACAG+TGG | - | chr8.1:5322599-5322618 | MS.gene073309:intron | 45.0% | |
| TGCCTAAGTCACAGCTTCAA+TGG | - | chr8.1:5321625-5321644 | MS.gene073309:intron | 45.0% | |
| TGTAGCTCAATTCTGCTACC+AGG | + | chr8.1:5323758-5323777 | None:intergenic | 45.0% | |
| TTAGGCATGTTGAAGGTAGG+TGG | + | chr8.1:5321612-5321631 | None:intergenic | 45.0% | |
| TTGAGTGGACATGAGTACTC+TGG | + | chr8.1:5323272-5323291 | None:intergenic | 45.0% | |
| TTGCCAACCCAATCAATACC+AGG | + | chr8.1:5323708-5323727 | None:intergenic | 45.0% | |
| TTTATACGACCATGGCGTCA+GGG | - | chr8.1:5322499-5322518 | MS.gene073309:intron | 45.0% | |
| TTTCCATCTGATCAGTGGCA+TGG | + | chr8.1:5323385-5323404 | None:intergenic | 45.0% | |
| ! | CAAACTTTGGAAGTGGAGAG+TGG | + | chr8.1:5323427-5323446 | None:intergenic | 45.0% |
| ! | GGTTCCCTTTAGAAACATGG+TGG | + | chr8.1:5321818-5321837 | None:intergenic | 45.0% |
| !! | ATGGTGGGTTTCACCAAGAA+TGG | + | chr8.1:5321802-5321821 | None:intergenic | 45.0% |
| !! | TCTGGGACCCACTTTTGAAT+TGG | + | chr8.1:5324709-5324728 | None:intergenic | 45.0% |
| !! | TGGTGGGTTTCACCAAGAAT+GGG | + | chr8.1:5321801-5321820 | None:intergenic | 45.0% |
| !!! | CCACAAGTTTTTTCGTCACC+CGG | - | chr8.1:5321897-5321916 | MS.gene073309:intron | 45.0% |
| !!! | AAAATAAATTCATTTTTAAT+TGG | + | chr8.1:5321544-5321563 | None:intergenic | 5.0% |
| ACTATCCGGTGCCTAGAAAC+AGG | - | chr8.1:5323732-5323751 | MS.gene073309:intron | 50.0% | |
| AGAGGCAAAGAACACTCTGG+AGG | - | chr8.1:5324579-5324598 | MS.gene073309:CDS | 50.0% | |
| CAAGCCACTGCTATGAAGTC+CGG | - | chr8.1:5322627-5322646 | MS.gene073309:intron | 50.0% | |
| CATGGGTATCCGACTATCTG+TGG | + | chr8.1:5322695-5322714 | None:intergenic | 50.0% | |
| CCCACTTGGAACACGAACAA+TGG | + | chr8.1:5321876-5321895 | None:intergenic | 50.0% | |
| CCCATTGTTCGTGTTCCAAG+TGG | - | chr8.1:5321872-5321891 | MS.gene073309:intron | 50.0% | |
| CCGGGTGACGAAAAAACTTG+TGG | + | chr8.1:5321900-5321919 | None:intergenic | 50.0% | |
| CCTGTTCGAGCAAGACGTTA+AGG | + | chr8.1:5321839-5321858 | None:intergenic | 50.0% | |
| CCTTAACGTCTTGCTCGAAC+AGG | - | chr8.1:5321836-5321855 | MS.gene073309:intron | 50.0% | |
| CGATTGGGGAAAAGCAAGAG+AGG | - | chr8.1:5324561-5324580 | MS.gene073309:CDS | 50.0% | |
| CTTGTGACACCACTGTTGAG+TGG | + | chr8.1:5322611-5322630 | None:intergenic | 50.0% | |
| GAAGTCCGGATACTCCAAGA+CGG | - | chr8.1:5322641-5322660 | MS.gene073309:intron | 50.0% | |
| GCATGGAATGCAGATACCTG+AGG | + | chr8.1:5323368-5323387 | None:intergenic | 50.0% | |
| GCTCCCTACAATCCCATTCT+TGG | - | chr8.1:5321786-5321805 | MS.gene073309:intron | 50.0% | |
| GGAATGCAGATACCTGAGGA+TGG | + | chr8.1:5323364-5323383 | None:intergenic | 50.0% | |
| GGGGTAGAAGTTGACATGCA+TGG | - | chr8.1:5323600-5323619 | MS.gene073309:intron | 50.0% | |
| GTACGATACATACGGGGATG+CGG | + | chr8.1:5323226-5323245 | None:intergenic | 50.0% | |
| GTATCCGGACTTCATAGCAG+TGG | + | chr8.1:5322634-5322653 | None:intergenic | 50.0% | |
| GTGGATGAAGGTAACGAGAG+AGG | - | chr8.1:5322948-5322967 | MS.gene073309:intron | 50.0% | |
| GTTTATACGACCATGGCGTC+AGG | - | chr8.1:5322498-5322517 | MS.gene073309:intron | 50.0% | |
| TGACTATTACCCTGACGCCA+TGG | + | chr8.1:5322511-5322530 | None:intergenic | 50.0% | |
| TGTGTCTATTCCACAGCCAC+AGG | - | chr8.1:5321657-5321676 | MS.gene073309:intron | 50.0% | |
| TTGAAGGTAGGTGGTAGCTG+TGG | + | chr8.1:5321603-5321622 | None:intergenic | 50.0% | |
| TTGCTATGAAGCCCGGATAC+GGG | + | chr8.1:5323248-5323267 | None:intergenic | 50.0% | |
| TTGGGTCGGGAAATCGAAGA+CGG | - | chr8.1:5323799-5323818 | MS.gene073309:intron | 50.0% | |
| ! | ACACTCTGGAGGAAACTCAG+AGG | - | chr8.1:5324590-5324609 | MS.gene073309:CDS | 50.0% |
| ! | CTTGCTATGAAGCCCGGATA+CGG | + | chr8.1:5323249-5323268 | None:intergenic | 50.0% |
| ! | GGGTTGGCAATGTCACTATC+CGG | - | chr8.1:5323718-5323737 | MS.gene073309:intron | 50.0% |
| ATACGGGTACGTCTCCGTCT+TGG | + | chr8.1:5322658-5322677 | None:intergenic | 55.0% | |
| CAAGTCTACTCCTGTGGCTG+TGG | + | chr8.1:5321670-5321689 | None:intergenic | 55.0% | |
| GCAGGTTTCACACCATCCTC+AGG | - | chr8.1:5323349-5323368 | MS.gene073309:intron | 55.0% | |
| GGAGCCCCATAAATTGGCTG+TGG | + | chr8.1:5322005-5322024 | None:intergenic | 55.0% | |
| ! | CGTCTCCGTCTTGGAGTATC+CGG | + | chr8.1:5322649-5322668 | None:intergenic | 55.0% |
| ! | CTGCTACCAGGCCTGTTTCT+AGG | + | chr8.1:5323746-5323765 | None:intergenic | 55.0% |
| !! | AGGGTGGCAATAGGAGCATC+TGG | + | chr8.1:5324727-5324746 | None:intergenic | 55.0% |
| !! | ATCAAGCACTGACGGCCGTA+TGG | - | chr8.1:5323954-5323973 | MS.gene073309:intron | 55.0% |
| !! | CTCTGGCTTGCTATGAAGCC+CGG | + | chr8.1:5323255-5323274 | None:intergenic | 55.0% |
| !! | GGGTGGCAATAGGAGCATCT+GGG | + | chr8.1:5324726-5324745 | None:intergenic | 55.0% |
| !! | CCAGGCCTGTTTCTAGGCAC+CGG | + | chr8.1:5323740-5323759 | None:intergenic | 60.0% |
| CCGGTGCCTAGAAACAGGCC+TGG | - | chr8.1:5323737-5323756 | MS.gene073309:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 5321072 | 5324750 | 5321072 | ID=MS.gene073309 |
| chr8.1 | mRNA | 5321072 | 5324750 | 5321072 | ID=MS.gene073309.t1;Parent=MS.gene073309 |
| chr8.1 | exon | 5324739 | 5324750 | 5324739 | ID=MS.gene073309.t1.exon1;Parent=MS.gene073309.t1 |
| chr8.1 | CDS | 5324739 | 5324750 | 5324739 | ID=cds.MS.gene073309.t1;Parent=MS.gene073309.t1 |
| chr8.1 | exon | 5324502 | 5324654 | 5324502 | ID=MS.gene073309.t1.exon2;Parent=MS.gene073309.t1 |
| chr8.1 | CDS | 5324502 | 5324654 | 5324502 | ID=cds.MS.gene073309.t1;Parent=MS.gene073309.t1 |
| chr8.1 | exon | 5323965 | 5324216 | 5323965 | ID=MS.gene073309.t1.exon3;Parent=MS.gene073309.t1 |
| chr8.1 | CDS | 5323965 | 5324216 | 5323965 | ID=cds.MS.gene073309.t1;Parent=MS.gene073309.t1 |
| chr8.1 | exon | 5322373 | 5322469 | 5322373 | ID=MS.gene073309.t1.exon4;Parent=MS.gene073309.t1 |
| chr8.1 | CDS | 5322373 | 5322469 | 5322373 | ID=cds.MS.gene073309.t1;Parent=MS.gene073309.t1 |
| chr8.1 | exon | 5321933 | 5322227 | 5321933 | ID=MS.gene073309.t1.exon5;Parent=MS.gene073309.t1 |
| chr8.1 | CDS | 5321933 | 5322227 | 5321933 | ID=cds.MS.gene073309.t1;Parent=MS.gene073309.t1 |
| chr8.1 | exon | 5321509 | 5321611 | 5321509 | ID=MS.gene073309.t1.exon6;Parent=MS.gene073309.t1 |
| chr8.1 | CDS | 5321509 | 5321611 | 5321509 | ID=cds.MS.gene073309.t1;Parent=MS.gene073309.t1 |
| chr8.1 | exon | 5321072 | 5321323 | 5321072 | ID=MS.gene073309.t1.exon7;Parent=MS.gene073309.t1 |
| chr8.1 | CDS | 5321072 | 5321323 | 5321072 | ID=cds.MS.gene073309.t1;Parent=MS.gene073309.t1 |
| Gene Sequence |
| Protein sequence |
