Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09806.t1 | RHN48429.1 | 92.8 | 754 | 50 | 2 | 1 | 754 | 1 | 750 | 0.00E+00 | 1193.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09806.t1 | A0A396H574 | 92.8 | 754 | 50 | 2 | 1 | 754 | 1 | 750 | 0.0e+00 | 1193.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051914 | MS.gene09806 | 0.812485 | 4.14E-51 | -1.69E-46 |
| MS.gene051955 | MS.gene09806 | 0.805369 | 1.38E-49 | -1.69E-46 |
| MS.gene052308 | MS.gene09806 | 0.834645 | 2.66E-56 | -1.69E-46 |
| MS.gene052367 | MS.gene09806 | 0.809768 | 1.61E-50 | -1.69E-46 |
| MS.gene053173 | MS.gene09806 | 0.817738 | 2.82E-52 | -1.69E-46 |
| MS.gene053348 | MS.gene09806 | 0.846806 | 1.72E-59 | -1.69E-46 |
| MS.gene054551 | MS.gene09806 | 0.822222 | 2.66E-53 | -1.69E-46 |
| MS.gene054552 | MS.gene09806 | 0.819702 | 1.01E-52 | -1.69E-46 |
| MS.gene054593 | MS.gene09806 | 0.841178 | 5.56E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene09806 | 0.818982 | 1.48E-52 | -1.69E-46 |
| MS.gene055308 | MS.gene09806 | 0.828553 | 8.43E-55 | -1.69E-46 |
| MS.gene055578 | MS.gene09806 | 0.844679 | 6.51E-59 | -1.69E-46 |
| MS.gene056041 | MS.gene09806 | 0.852037 | 6.00E-61 | -1.69E-46 |
| MS.gene05640 | MS.gene09806 | 0.84704 | 1.49E-59 | -1.69E-46 |
| MS.gene056526 | MS.gene09806 | 0.825725 | 4.01E-54 | -1.69E-46 |
| MS.gene056528 | MS.gene09806 | 0.811449 | 6.96E-51 | -1.69E-46 |
| MS.gene057358 | MS.gene09806 | 0.83457 | 2.78E-56 | -1.69E-46 |
| MS.gene057359 | MS.gene09806 | 0.833125 | 6.38E-56 | -1.69E-46 |
| MS.gene058013 | MS.gene09806 | 0.809206 | 2.12E-50 | -1.69E-46 |
| MS.gene058128 | MS.gene09806 | 0.824346 | 8.48E-54 | -1.69E-46 |
| MS.gene058853 | MS.gene09806 | 0.824456 | 7.99E-54 | -1.69E-46 |
| MS.gene059553 | MS.gene09806 | 0.827623 | 1.41E-54 | -1.69E-46 |
| MS.gene060473 | MS.gene09806 | 0.843691 | 1.20E-58 | -1.69E-46 |
| MS.gene060565 | MS.gene09806 | 0.828284 | 9.79E-55 | -1.69E-46 |
| MS.gene06093 | MS.gene09806 | 0.826445 | 2.70E-54 | -1.69E-46 |
| MS.gene061099 | MS.gene09806 | 0.825043 | 5.81E-54 | -1.69E-46 |
| MS.gene061260 | MS.gene09806 | 0.849189 | 3.79E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09806.t1 | MTR_7g100700 | 95.889 | 754 | 26 | 3 | 1 | 754 | 1 | 749 | 0.0 | 1435 |
| MS.gene09806.t1 | MTR_1g066870 | 46.880 | 657 | 295 | 19 | 17 | 649 | 17 | 643 | 4.00e-105 | 336 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09806.t1 | AT3G53320 | 35.762 | 302 | 152 | 11 | 19 | 297 | 16 | 298 | 1.01e-25 | 112 |
| MS.gene09806.t1 | AT2G37070 | 41.606 | 137 | 57 | 7 | 19 | 144 | 18 | 142 | 8.24e-16 | 81.6 |
| MS.gene09806.t1 | AT2G37070 | 41.606 | 137 | 57 | 7 | 19 | 144 | 18 | 142 | 1.10e-15 | 81.3 |
Find 149 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCGTCTAGCTCTGGGATTC+TGG | 0.097225 | 7.1:-7790475 | MS.gene09806:CDS |
| GGTAGCTGCACTAGCAATTT+TGG | 0.153480 | 7.1:+7790503 | None:intergenic |
| TTTCTTCTTGCGGAATTAAA+TGG | 0.190171 | 7.1:+7789092 | None:intergenic |
| TCCAATTACCACCAAAATTC+AGG | 0.233828 | 7.1:-7791077 | MS.gene09806:intron |
| TGACTGGCCAGGAGTTAATT+TGG | 0.237626 | 7.1:+7789187 | None:intergenic |
| GTGTTAATGTTTAGGGGTTT+TGG | 0.243930 | 7.1:-7790724 | MS.gene09806:intron |
| AACACTAAGCGATGCTCTTT+TGG | 0.247393 | 7.1:+7789427 | None:intergenic |
| ACAAACCTTTGCTTAATTCT+TGG | 0.254223 | 7.1:+7787857 | None:intergenic |
| TCAAGAAACAAAACTGAATC+TGG | 0.266121 | 7.1:-7789002 | MS.gene09806:CDS |
| CCAAAGATTGGTTTCTTTGA+TGG | 0.281624 | 7.1:-7788633 | MS.gene09806:CDS |
| CTTGCAGCTTTGCTTTGATT+TGG | 0.294963 | 7.1:+7788310 | None:intergenic |
| CCAGCTGTTGTGAGAGTAAT+CGG | 0.300895 | 7.1:-7789735 | MS.gene09806:CDS |
| TAAGTTGCTACCGGAAGATT+TGG | 0.323444 | 7.1:+7789136 | None:intergenic |
| AATGATTCATCAATATGATT+TGG | 0.323598 | 7.1:+7788228 | None:intergenic |
| CCAGCTCCTGCAAAACCTTC+AGG | 0.325778 | 7.1:-7788672 | MS.gene09806:CDS |
| TGAAACTGAAAGTGTTGATT+TGG | 0.331552 | 7.1:-7790580 | MS.gene09806:CDS |
| CCATACCATTGGATTTATCT+TGG | 0.343022 | 7.1:+7787920 | None:intergenic |
| TGTGAATCCATTTCGACCTT+AGG | 0.344717 | 7.1:-7790621 | MS.gene09806:CDS |
| GACAAGGCAAAACACATAAA+TGG | 0.346572 | 7.1:-7789383 | MS.gene09806:CDS |
| AGCGAAGCCCGATGGTGTTC+TGG | 0.355565 | 7.1:+7789025 | None:intergenic |
| TCGTCTAGCTCTGGGATTCT+GGG | 0.368045 | 7.1:-7790474 | MS.gene09806:CDS |
| CCCAGAGCTAGACGACATTC+TGG | 0.369940 | 7.1:+7790482 | None:intergenic |
| CAAAGATTGGTTTCTTTGAT+GGG | 0.372758 | 7.1:-7788632 | MS.gene09806:CDS |
| CACCCCTACCAGCATTGATA+TGG | 0.384562 | 7.1:-7787815 | MS.gene09806:CDS |
| AGCAACTTATCTGATAATAT+TGG | 0.387973 | 7.1:-7789122 | MS.gene09806:CDS |
| ACCAGAATGTCGTCTAGCTC+TGG | 0.390989 | 7.1:-7790483 | MS.gene09806:CDS |
| CGACTGCCTTCGCCAAAGAT+TGG | 0.391284 | 7.1:-7788645 | MS.gene09806:CDS |
| CCATCAAAGAAACCAATCTT+TGG | 0.394047 | 7.1:+7788633 | None:intergenic |
| GGGCAGGAGGCTCAGCAAAA+TGG | 0.394670 | 7.1:-7788744 | MS.gene09806:CDS |
| TATACATCCTCTTCAATCCT+TGG | 0.397018 | 7.1:+7790651 | None:intergenic |
| GCAAGAAGAAACGTTATTGC+TGG | 0.399942 | 7.1:-7789080 | MS.gene09806:CDS |
| GAATTTGCACTAGGCTTTGT+TGG | 0.406749 | 7.1:+7789461 | None:intergenic |
| ATCAACCAACTTACCTGTGC+TGG | 0.411015 | 7.1:-7787701 | MS.gene09806:CDS |
| TTGGATAATATTGTGGACTT+AGG | 0.412150 | 7.1:+7789206 | None:intergenic |
| TCTTTCGCAGATTGAACTTA+GGG | 0.413908 | 7.1:+7790870 | None:intergenic |
| TGGTGGTAATTGGAAGAAAC+GGG | 0.413945 | 7.1:+7791086 | None:intergenic |
| TACATCACTGTCGCATGAAA+TGG | 0.416230 | 7.1:-7788118 | MS.gene09806:CDS |
| TCTTTGACATCGTTGTTTAT+CGG | 0.416620 | 7.1:+7791161 | None:intergenic |
| TTGGTGGTAATTGGAAGAAA+CGG | 0.418940 | 7.1:+7791085 | None:intergenic |
| CTCTTTCGCAGATTGAACTT+AGG | 0.423818 | 7.1:+7790869 | None:intergenic |
| TCAGCAACTTCCAAATCTTC+CGG | 0.426512 | 7.1:-7789146 | MS.gene09806:CDS |
| ATCGCTCCCTAAGGTCGAAA+TGG | 0.427949 | 7.1:+7790614 | None:intergenic |
| CATCTGTTATTGAAGGTTCA+AGG | 0.431926 | 7.1:-7789238 | MS.gene09806:CDS |
| GTATAAATTCTCAGATTTCT+CGG | 0.431931 | 7.1:-7788785 | MS.gene09806:CDS |
| TTTGGAGGGTGATTTGTTTG+AGG | 0.435278 | 7.1:-7790562 | MS.gene09806:CDS |
| CCCTCCCGCCAGAACACCAT+CGG | 0.440512 | 7.1:-7789033 | MS.gene09806:CDS |
| GTGAATCCATTTCGACCTTA+GGG | 0.441776 | 7.1:-7790620 | MS.gene09806:CDS |
| CATCAATATGATTTGGATGT+GGG | 0.447348 | 7.1:+7788235 | None:intergenic |
| GAACTATCACACATGTGTTT+AGG | 0.449363 | 7.1:+7788870 | None:intergenic |
| AGCAATAACGTTTCTTCTTG+CGG | 0.458182 | 7.1:+7789082 | None:intergenic |
| AACACATGTGTGATAGTTCA+AGG | 0.461632 | 7.1:-7788866 | MS.gene09806:CDS |
| TTTGTAATGCTTTCCAGCAC+AGG | 0.466793 | 7.1:+7787688 | None:intergenic |
| ATCAACACTTTCAGTTTCAA+AGG | 0.467451 | 7.1:+7790584 | None:intergenic |
| TGAAGGCATCACCTGCTTCA+AGG | 0.467661 | 7.1:-7789764 | MS.gene09806:CDS |
| TGTGGTATTTGTGTAAAAGT+AGG | 0.484204 | 7.1:+7789690 | None:intergenic |
| CCCGATGGTGTTCTGGCGGG+AGG | 0.485779 | 7.1:+7789032 | None:intergenic |
| CTGGCGGGAGGGCGAGATGA+GGG | 0.488219 | 7.1:+7789044 | None:intergenic |
| TTGTCTTGGTTGATATTGAC+TGG | 0.491915 | 7.1:+7789171 | None:intergenic |
| ATTCGATAACTCCATACCAT+TGG | 0.498382 | 7.1:+7787909 | None:intergenic |
| GCTTTCCAGCACAGGTAAGT+TGG | 0.501226 | 7.1:+7787696 | None:intergenic |
| GAATTATCAGTCAAAGTGTA+AGG | 0.507200 | 7.1:-7788722 | MS.gene09806:CDS |
| ATCTGCGAAAGAGTTTAGCT+TGG | 0.507998 | 7.1:-7790859 | MS.gene09806:CDS |
| TCTGCGAAAGAGTTTAGCTT+GGG | 0.510391 | 7.1:-7790858 | MS.gene09806:CDS |
| TTCTTTGTTTCAGATGTCTG+AGG | 0.511993 | 7.1:+7790899 | None:intergenic |
| CCGCTAGTTCTGTTAGTGAC+TGG | 0.512313 | 7.1:-7788923 | MS.gene09806:CDS |
| CAAGAAACAAAACTGAATCT+GGG | 0.519601 | 7.1:-7789001 | MS.gene09806:CDS |
| TCATCAATATGATTTGGATG+TGG | 0.521364 | 7.1:+7788234 | None:intergenic |
| CCTCCCGCCAGAACACCATC+GGG | 0.521771 | 7.1:-7789032 | MS.gene09806:CDS |
| TTGGTTGATATTGACTGGCC+AGG | 0.525155 | 7.1:+7789176 | None:intergenic |
| TCAAGAGCATCTGTTATTGA+AGG | 0.525511 | 7.1:-7789245 | MS.gene09806:CDS |
| AGTTAATTTGGATAATATTG+TGG | 0.526161 | 7.1:+7789199 | None:intergenic |
| GGCTTTGTTGGCACCTTCGA+CGG | 0.527206 | 7.1:+7789473 | None:intergenic |
| CCAAGATAAATCCAATGGTA+TGG | 0.527305 | 7.1:-7787920 | MS.gene09806:CDS |
| TAGGGGTGACACATTGATAC+GGG | 0.528043 | 7.1:+7787830 | None:intergenic |
| GCTGGTAGATTCCTTGAAGC+AGG | 0.530424 | 7.1:+7789753 | None:intergenic |
| ATCTGTTATTGAAGGTTCAA+GGG | 0.532151 | 7.1:-7789237 | MS.gene09806:CDS |
| GACTCCCTCCTTGTAGCGAC+AGG | 0.532486 | 7.1:+7789509 | None:intergenic |
| TCCACATATCATAAGCGAAA+AGG | 0.535480 | 7.1:-7789405 | MS.gene09806:CDS |
| GAACATAAATTCCAAGACTC+AGG | 0.536096 | 7.1:-7787992 | MS.gene09806:CDS |
| GCTAGAGTTACTATCAATGC+TGG | 0.539482 | 7.1:+7788842 | None:intergenic |
| TATTGAAGGTTCAAGGGGTA+CGG | 0.540244 | 7.1:-7789231 | MS.gene09806:CDS |
| ATCTATTTCAAAGCCGTCGA+AGG | 0.540506 | 7.1:-7789486 | MS.gene09806:CDS |
| CCAGAATGTCGTCTAGCTCT+GGG | 0.542743 | 7.1:-7790482 | MS.gene09806:CDS |
| AAGCCCGATGGTGTTCTGGC+GGG | 0.543148 | 7.1:+7789029 | None:intergenic |
| TATCGGAGAAGCGTCGGAGT+CGG | 0.545556 | 7.1:+7791178 | None:intergenic |
| TCTTTGGCGAAGGCAGTCGC+AGG | 0.546881 | 7.1:+7788649 | None:intergenic |
| CCGATTACTCTCACAACAGC+TGG | 0.547872 | 7.1:+7789735 | None:intergenic |
| AACTGAAAGTGTTGATTTGG+AGG | 0.547878 | 7.1:-7790577 | MS.gene09806:CDS |
| TCTGGCGGGAGGGCGAGATG+AGG | 0.548702 | 7.1:+7789043 | None:intergenic |
| TATAATTGAAGGTGTTGAGA+AGG | 0.549903 | 7.1:-7790682 | MS.gene09806:CDS |
| GTAGGGGTGACACATTGATA+CGG | 0.550011 | 7.1:+7787829 | None:intergenic |
| TGTTAGTGACTGGTCTTCAG+AGG | 0.550980 | 7.1:-7788913 | MS.gene09806:CDS |
| ACTGACCTGTGTCGATCACC+AGG | 0.551921 | 7.1:-7788070 | MS.gene09806:CDS |
| TGCCATATCAATGCTGGTAG+GGG | 0.552572 | 7.1:+7787813 | None:intergenic |
| ATATTATCCAAATTAACTCC+TGG | 0.553361 | 7.1:-7789194 | MS.gene09806:CDS |
| TCAGACACTAATGCAGATCA+AGG | 0.554880 | 7.1:-7788807 | MS.gene09806:CDS |
| TGATAGTAACTCTAGCAGAA+AGG | 0.557439 | 7.1:-7788835 | MS.gene09806:CDS |
| GAGTTAACTAGTATAATTGA+AGG | 0.559085 | 7.1:-7790693 | MS.gene09806:CDS |
| TTGCCATATCAATGCTGGTA+GGG | 0.559511 | 7.1:+7787812 | None:intergenic |
| GGTTAAACTATCGCTCCCTA+AGG | 0.567132 | 7.1:+7790605 | None:intergenic |
| ATTATCAGATAAGTTGCTAC+CGG | 0.571364 | 7.1:+7789127 | None:intergenic |
| TTTCTTGAAGCGAAGCCCGA+TGG | 0.578631 | 7.1:+7789017 | None:intergenic |
| CAGTCACTAACAGAACTAGC+GGG | 0.579052 | 7.1:+7788924 | None:intergenic |
| GAAATTGTGGAATTTGCACT+AGG | 0.580738 | 7.1:+7789452 | None:intergenic |
| ACTGTCCTGGTGATCGACAC+AGG | 0.584353 | 7.1:+7788065 | None:intergenic |
| CCGATGGTGTTCTGGCGGGA+GGG | 0.584412 | 7.1:+7789033 | None:intergenic |
| GGCTTGCTAAAACATGGAGC+AGG | 0.585668 | 7.1:-7788348 | MS.gene09806:CDS |
| AAAGATTGGTTTCTTTGATG+GGG | 0.587295 | 7.1:-7788631 | MS.gene09806:intron |
| AAGTGTAAGGACTGCTTCTG+TGG | 0.593654 | 7.1:-7788709 | MS.gene09806:CDS |
| CAGCTGTTGTGAGAGTAATC+GGG | 0.596424 | 7.1:-7789734 | MS.gene09806:CDS |
| GCGGGAGGGCGAGATGAGGG+AGG | 0.596464 | 7.1:+7789047 | None:intergenic |
| CCACACTCTTCTGTGTCTCA+CGG | 0.596515 | 7.1:-7788369 | MS.gene09806:CDS |
| AAGAAACCAATCTTTGGCGA+AGG | 0.598647 | 7.1:+7788639 | None:intergenic |
| GAAGGCAGTCGCAGGCCTGA+AGG | 0.602125 | 7.1:+7788657 | None:intergenic |
| GATTGTTTGATCGAACAAGT+TGG | 0.602661 | 7.1:-7788021 | MS.gene09806:CDS |
| GGGATCGAGAAGAGAATCAT+CGG | 0.607587 | 7.1:+7791106 | None:intergenic |
| GTTGTTTATCGGAGAAGCGT+CGG | 0.613172 | 7.1:+7791172 | None:intergenic |
| AACATTACCAAGGATTGAAG+AGG | 0.617361 | 7.1:-7790658 | MS.gene09806:CDS |
| AGCTGCTAGAAAGGTTGGCG+TGG | 0.617848 | 7.1:-7790339 | MS.gene09806:CDS |
| TGGCGTGGTTCCTCGCAACA+AGG | 0.620806 | 7.1:-7790324 | MS.gene09806:intron |
| TGAAGTTGCCATATCAATGC+TGG | 0.621101 | 7.1:+7787807 | None:intergenic |
| AAAGCCTGTCGCTACAAGGA+GGG | 0.622729 | 7.1:-7789513 | MS.gene09806:intron |
| GAAGCCCGATGGTGTTCTGG+CGG | 0.624470 | 7.1:+7789028 | None:intergenic |
| AGCTTCCAAGATAAATCCAA+TGG | 0.625508 | 7.1:-7787925 | MS.gene09806:CDS |
| TGGTGATCGACACAGGTCAG+TGG | 0.625686 | 7.1:+7788072 | None:intergenic |
| ATGTAAGTTACCTTGTTGCG+AGG | 0.626684 | 7.1:+7790314 | None:intergenic |
| TATCATAAGCGAAAAGGACA+AGG | 0.631796 | 7.1:-7789399 | MS.gene09806:CDS |
| CGTCTAGCTCTGGGATTCTG+GGG | 0.633762 | 7.1:-7790473 | MS.gene09806:CDS |
| TCTGTTATTGAAGGTTCAAG+GGG | 0.639649 | 7.1:-7789236 | MS.gene09806:CDS |
| CCAGTCACTAACAGAACTAG+CGG | 0.641140 | 7.1:+7788923 | None:intergenic |
| GGAGCAGGAAGTTCAAGTGA+AGG | 0.642645 | 7.1:-7788333 | MS.gene09806:CDS |
| TGTGGTTGCGCTCCACCACG+TGG | 0.647882 | 7.1:+7788387 | None:intergenic |
| TCTCACGGCTTGCTAAAACA+TGG | 0.649356 | 7.1:-7788354 | MS.gene09806:CDS |
| TATCATGATAGACACTGTCC+TGG | 0.654242 | 7.1:+7788052 | None:intergenic |
| TTGATATGGCAACTTCAGCA+AGG | 0.657298 | 7.1:-7787801 | MS.gene09806:CDS |
| GTTGCCATATCAATGCTGGT+AGG | 0.660587 | 7.1:+7787811 | None:intergenic |
| ACTGAAAGTGTTGATTTGGA+GGG | 0.665976 | 7.1:-7790576 | MS.gene09806:CDS |
| AGTCACTAACAGAACTAGCG+GGG | 0.666195 | 7.1:+7788925 | None:intergenic |
| TCCTCAGTGCACACTCCACG+TGG | 0.667406 | 7.1:-7788402 | MS.gene09806:CDS |
| AAAAGCCTGTCGCTACAAGG+AGG | 0.670329 | 7.1:-7789514 | MS.gene09806:intron |
| AAGACTCAGGAAAAGATCAA+CGG | 0.677530 | 7.1:-7787979 | MS.gene09806:CDS |
| TCAGTGCACACTCCACGTGG+TGG | 0.680157 | 7.1:-7788399 | MS.gene09806:CDS |
| CCGTGAGACACAGAAGAGTG+TGG | 0.683825 | 7.1:+7788369 | None:intergenic |
| TTGAGAAGGAAACATTACCA+AGG | 0.691255 | 7.1:-7790668 | MS.gene09806:CDS |
| GTCACTAACAGAACTAGCGG+GGG | 0.703043 | 7.1:+7788926 | None:intergenic |
| TATGGAGTTATCGAATCACA+AGG | 0.703342 | 7.1:-7787902 | MS.gene09806:CDS |
| AAGGCAAAACACATAAATGG+CGG | 0.718948 | 7.1:-7789380 | MS.gene09806:intron |
| AGGGGTGACACATTGATACG+GGG | 0.749012 | 7.1:+7787831 | None:intergenic |
| ACCACGTGGAGTGTGCACTG+AGG | 0.757829 | 7.1:+7788401 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGAAATGAAAAATT+AGG | + | chr7.1:7787821-7787840 | None:intergenic | 10.0% |
| !!! | TTGATTTATTTATTTTCTAT+TGG | - | chr7.1:7788114-7788133 | MS.gene09806:CDS | 10.0% |
| !!! | TTTTTCAATTTCTTAAAAAT+AGG | - | chr7.1:7788070-7788089 | MS.gene09806:CDS | 10.0% |
| !!! | ATTTTTATCGTTTATCAAAA+TGG | + | chr7.1:7789044-7789063 | None:intergenic | 15.0% |
| !!! | TCTTCAAAATTTTTTGAATT+CGG | + | chr7.1:7787907-7787926 | None:intergenic | 15.0% |
| !! | AATGATTCATCAATATGATT+TGG | + | chr7.1:7790635-7790654 | None:intergenic | 20.0% |
| !! | ATATGTGATTCTATTAACTA+TGG | - | chr7.1:7790388-7790407 | MS.gene09806:intron | 20.0% |
| !! | TAAAGAGATGAAGATTAAAT+TGG | + | chr7.1:7790427-7790446 | None:intergenic | 20.0% |
| !!! | AGTTAATTTGGATAATATTG+TGG | + | chr7.1:7789664-7789683 | None:intergenic | 20.0% |
| !!! | ATCGTAAATGAAATTTTAAG+TGG | - | chr7.1:7789275-7789294 | MS.gene09806:intron | 20.0% |
| !!! | CAACAAAAATACTATAGTTT+TGG | + | chr7.1:7788653-7788672 | None:intergenic | 20.0% |
| ! | AAAAACCAAGAATTAAGCAA+AGG | - | chr7.1:7790998-7791017 | MS.gene09806:intron | 25.0% |
| ! | AAATTTACTACAACTCAGAA+AGG | + | chr7.1:7789567-7789586 | None:intergenic | 25.0% |
| ! | AAGTTTCATTCAGATTCAAT+TGG | + | chr7.1:7787854-7787873 | None:intergenic | 25.0% |
| ! | AATCGTAAGTTAGTATAACT+AGG | + | chr7.1:7789231-7789250 | None:intergenic | 25.0% |
| ! | AATTTGTATCATTATGACCT+TGG | - | chr7.1:7790319-7790338 | MS.gene09806:intron | 25.0% |
| ! | AGCAACTTATCTGATAATAT+TGG | - | chr7.1:7789738-7789757 | MS.gene09806:CDS | 25.0% |
| ! | ATAATGCTTATTCAAAACTG+AGG | - | chr7.1:7788442-7788461 | MS.gene09806:intron | 25.0% |
| ! | ATATTATCCAAATTAACTCC+TGG | - | chr7.1:7789666-7789685 | MS.gene09806:intron | 25.0% |
| ! | ATCATGTTGTCTCAATAAAA+AGG | + | chr7.1:7788697-7788716 | None:intergenic | 25.0% |
| ! | GAGTTAACTAGTATAATTGA+AGG | - | chr7.1:7788167-7788186 | MS.gene09806:CDS | 25.0% |
| ! | GTATAAATTCTCAGATTTCT+CGG | - | chr7.1:7790075-7790094 | MS.gene09806:intron | 25.0% |
| ! | TAAGTTAGTATAACTAGGAA+AGG | + | chr7.1:7789226-7789245 | None:intergenic | 25.0% |
| ! | TAATGCTTATTCAAAACTGA+GGG | - | chr7.1:7788443-7788462 | MS.gene09806:intron | 25.0% |
| ! | TATCAAAATGGAAAGCAATT+AGG | + | chr7.1:7789032-7789051 | None:intergenic | 25.0% |
| !! | AAAAATGTGAACCTGAATTT+TGG | + | chr7.1:7787797-7787816 | None:intergenic | 25.0% |
| !! | AAAAGATTCATTTTGCAACA+TGG | - | chr7.1:7791096-7791115 | MS.gene09806:CDS | 25.0% |
| !!! | TCTAGTTTTTTGTTTGCAAT+TGG | + | chr7.1:7790593-7790612 | None:intergenic | 25.0% |
| !!! | TCTATTGGTGTTAATGTTTA+GGG | - | chr7.1:7788129-7788148 | MS.gene09806:CDS | 25.0% |
| !!! | TTAATCCTCATTTTTGCATA+AGG | - | chr7.1:7789537-7789556 | MS.gene09806:intron | 25.0% |
| !!! | TTCTATTGGTGTTAATGTTT+AGG | - | chr7.1:7788128-7788147 | MS.gene09806:CDS | 25.0% |
| !!! | TTGCTTAATTCTTGGTTTTT+AGG | + | chr7.1:7790998-7791017 | None:intergenic | 25.0% |
| !!! | TTTCGATTGATTTTAGATGA+AGG | - | chr7.1:7789079-7789098 | MS.gene09806:CDS | 25.0% |
| ACAAACCTTTGCTTAATTCT+TGG | + | chr7.1:7791006-7791025 | None:intergenic | 30.0% | |
| ATAGAATCACATATTACACG+TGG | + | chr7.1:7790382-7790401 | None:intergenic | 30.0% | |
| ATCAACACTTTCAGTTTCAA+AGG | + | chr7.1:7788279-7788298 | None:intergenic | 30.0% | |
| ATCTGTTATTGAAGGTTCAA+GGG | - | chr7.1:7789623-7789642 | MS.gene09806:intron | 30.0% | |
| ATTATCAGATAAGTTGCTAC+CGG | + | chr7.1:7789736-7789755 | None:intergenic | 30.0% | |
| CAAGAAACAAAACTGAATCT+GGG | - | chr7.1:7789859-7789878 | MS.gene09806:intron | 30.0% | |
| GAATTATCAGTCAAAGTGTA+AGG | - | chr7.1:7790138-7790157 | MS.gene09806:intron | 30.0% | |
| GACTATGTCAAACATAAAGA+AGG | + | chr7.1:7790267-7790286 | None:intergenic | 30.0% | |
| TAATCTTCATCTCTTTATGC+AGG | - | chr7.1:7790430-7790449 | MS.gene09806:intron | 30.0% | |
| TATGTCAAACATAAAGAAGG+CGG | + | chr7.1:7790264-7790283 | None:intergenic | 30.0% | |
| TCAAGAAACAAAACTGAATC+TGG | - | chr7.1:7789858-7789877 | MS.gene09806:intron | 30.0% | |
| TCTTTGACATCGTTGTTTAT+CGG | + | chr7.1:7787702-7787721 | None:intergenic | 30.0% | |
| TGCTACAAAAATTGAACAGT+GGG | - | chr7.1:7787930-7787949 | MS.gene09806:CDS | 30.0% | |
| TGTGGTATTTGTGTAAAAGT+AGG | + | chr7.1:7789173-7789192 | None:intergenic | 30.0% | |
| TTAAATTAGTTGCATACCTG+TGG | + | chr7.1:7789191-7789210 | None:intergenic | 30.0% | |
| TTGGATAATATTGTGGACTT+AGG | + | chr7.1:7789657-7789676 | None:intergenic | 30.0% | |
| TTTCTTCTTGCGGAATTAAA+TGG | + | chr7.1:7789771-7789790 | None:intergenic | 30.0% | |
| ! | AAATGAATCTTTTGCTGCAA+AGG | + | chr7.1:7791089-7791108 | None:intergenic | 30.0% |
| ! | AATGAATCTTTTGCTGCAAA+GGG | + | chr7.1:7791088-7791107 | None:intergenic | 30.0% |
| ! | AGAAGTGCAATATCAATTCT+AGG | - | chr7.1:7788959-7788978 | MS.gene09806:CDS | 30.0% |
| ! | CATCAATATGATTTGGATGT+GGG | + | chr7.1:7790628-7790647 | None:intergenic | 30.0% |
| ! | TACTTTTACACAAATACCAC+AGG | - | chr7.1:7789172-7789191 | MS.gene09806:CDS | 30.0% |
| ! | TCATCAATATGATTTGGATG+TGG | + | chr7.1:7790629-7790648 | None:intergenic | 30.0% |
| !! | AAAGATTGGTTTCTTTGATG+GGG | - | chr7.1:7790229-7790248 | MS.gene09806:intron | 30.0% |
| !! | CAAAGATTGGTTTCTTTGAT+GGG | - | chr7.1:7790228-7790247 | MS.gene09806:intron | 30.0% |
| !! | CTATTGGTGTTAATGTTTAG+GGG | - | chr7.1:7788130-7788149 | MS.gene09806:CDS | 30.0% |
| !! | TATAATTGAAGGTGTTGAGA+AGG | - | chr7.1:7788178-7788197 | MS.gene09806:CDS | 30.0% |
| !! | TGAAACTGAAAGTGTTGATT+TGG | - | chr7.1:7788280-7788299 | MS.gene09806:CDS | 30.0% |
| !! | TGCAATATCAATTCTAGGAT+AGG | - | chr7.1:7788964-7788983 | MS.gene09806:CDS | 30.0% |
| !!! | ATTACATCCCAAGTTTTGAA+AGG | + | chr7.1:7788881-7788900 | None:intergenic | 30.0% |
| !!! | GGAGTGATTTTAACTTAGAA+GGG | - | chr7.1:7790096-7790115 | MS.gene09806:intron | 30.0% |
| !!! | TTACATCCCAAGTTTTGAAA+GGG | + | chr7.1:7788880-7788899 | None:intergenic | 30.0% |
| AAAAACTCACAGTCTCTAGT+TGG | + | chr7.1:7788416-7788435 | None:intergenic | 35.0% | |
| AACACATGTGTGATAGTTCA+AGG | - | chr7.1:7789994-7790013 | MS.gene09806:intron | 35.0% | |
| AACATTACCAAGGATTGAAG+AGG | - | chr7.1:7788202-7788221 | MS.gene09806:CDS | 35.0% | |
| AAGACTCAGGAAAAGATCAA+CGG | - | chr7.1:7790881-7790900 | MS.gene09806:CDS | 35.0% | |
| AAGGCAAAACACATAAATGG+CGG | - | chr7.1:7789480-7789499 | MS.gene09806:CDS | 35.0% | |
| AAGTAATCTTGAGAAGAGAC+AGG | + | chr7.1:7788798-7788817 | None:intergenic | 35.0% | |
| AGCAATAACGTTTCTTCTTG+CGG | + | chr7.1:7789781-7789800 | None:intergenic | 35.0% | |
| AGCTTCCAAGATAAATCCAA+TGG | - | chr7.1:7790935-7790954 | MS.gene09806:CDS | 35.0% | |
| AGTAATCTTGAGAAGAGACA+GGG | + | chr7.1:7788797-7788816 | None:intergenic | 35.0% | |
| ATTCGATAACTCCATACCAT+TGG | + | chr7.1:7790954-7790973 | None:intergenic | 35.0% | |
| CACTTAACAGTAGGATCATA+AGG | + | chr7.1:7788770-7788789 | None:intergenic | 35.0% | |
| CATCTGTTATTGAAGGTTCA+AGG | - | chr7.1:7789622-7789641 | MS.gene09806:intron | 35.0% | |
| CCAAGATAAATCCAATGGTA+TGG | - | chr7.1:7790940-7790959 | MS.gene09806:CDS | 35.0% | |
| CCATACCATTGGATTTATCT+TGG | + | chr7.1:7790943-7790962 | None:intergenic | 35.0% | |
| CCATCAAAGAAACCAATCTT+TGG | + | chr7.1:7790230-7790249 | None:intergenic | 35.0% | |
| CTGCTACAAAAATTGAACAG+TGG | - | chr7.1:7787929-7787948 | MS.gene09806:CDS | 35.0% | |
| GAAAAACCAATACATGGCTA+TGG | + | chr7.1:7790360-7790379 | None:intergenic | 35.0% | |
| GAAATTGTGGAATTTGCACT+AGG | + | chr7.1:7789411-7789430 | None:intergenic | 35.0% | |
| GAACATAAATTCCAAGACTC+AGG | - | chr7.1:7790868-7790887 | MS.gene09806:CDS | 35.0% | |
| GAACTATCACACATGTGTTT+AGG | + | chr7.1:7789993-7790012 | None:intergenic | 35.0% | |
| GACAAGGCAAAACACATAAA+TGG | - | chr7.1:7789477-7789496 | MS.gene09806:CDS | 35.0% | |
| GATTGTTTGATCGAACAAGT+TGG | - | chr7.1:7790839-7790858 | MS.gene09806:CDS | 35.0% | |
| GCATTCCTTATGCAAAAATG+AGG | + | chr7.1:7789545-7789564 | None:intergenic | 35.0% | |
| GTGGACATTGATATACATTC+AGG | + | chr7.1:7788923-7788942 | None:intergenic | 35.0% | |
| TATACATCCTCTTCAATCCT+TGG | + | chr7.1:7788212-7788231 | None:intergenic | 35.0% | |
| TATCATAAGCGAAAAGGACA+AGG | - | chr7.1:7789461-7789480 | MS.gene09806:CDS | 35.0% | |
| TATGGAGTTATCGAATCACA+AGG | - | chr7.1:7790958-7790977 | MS.gene09806:CDS | 35.0% | |
| TATTTCTTACCGAGTGAGAT+TGG | - | chr7.1:7788717-7788736 | MS.gene09806:CDS | 35.0% | |
| TCCAATTACCACCAAAATTC+AGG | - | chr7.1:7787783-7787802 | MS.gene09806:CDS | 35.0% | |
| TCCACATATCATAAGCGAAA+AGG | - | chr7.1:7789455-7789474 | MS.gene09806:CDS | 35.0% | |
| TCTATGTAACCAATCTCACT+CGG | + | chr7.1:7788729-7788748 | None:intergenic | 35.0% | |
| TCTGTTATTGAAGGTTCAAG+GGG | - | chr7.1:7789624-7789643 | MS.gene09806:intron | 35.0% | |
| TCTTTCGCAGATTGAACTTA+GGG | + | chr7.1:7787993-7788012 | None:intergenic | 35.0% | |
| TGATAGTAACTCTAGCAGAA+AGG | - | chr7.1:7790025-7790044 | MS.gene09806:intron | 35.0% | |
| TGATATTGCACTTCTGTGAT+GGG | + | chr7.1:7788954-7788973 | None:intergenic | 35.0% | |
| TGTTTCCCCTTTCAAAACTT+GGG | - | chr7.1:7788871-7788890 | MS.gene09806:CDS | 35.0% | |
| TTGAGAAGGAAACATTACCA+AGG | - | chr7.1:7788192-7788211 | MS.gene09806:CDS | 35.0% | |
| TTGATATTGCACTTCTGTGA+TGG | + | chr7.1:7788955-7788974 | None:intergenic | 35.0% | |
| ! | AATGTGAACCTGAATTTTGG+TGG | + | chr7.1:7787794-7787813 | None:intergenic | 35.0% |
| ! | CATTTTCAGAAAACGAAGCT+TGG | - | chr7.1:7787875-7787894 | MS.gene09806:CDS | 35.0% |
| ! | GTGTTAATGTTTAGGGGTTT+TGG | - | chr7.1:7788136-7788155 | MS.gene09806:CDS | 35.0% |
| ! | TCCTTTTCGCTTATGATATG+TGG | + | chr7.1:7789459-7789478 | None:intergenic | 35.0% |
| ! | TGCTCTTTTGGATGAAATTG+TGG | + | chr7.1:7789424-7789443 | None:intergenic | 35.0% |
| ! | TTCTTTGTTTCAGATGTCTG+AGG | + | chr7.1:7787964-7787983 | None:intergenic | 35.0% |
| ! | TTGGTGGTAATTGGAAGAAA+CGG | + | chr7.1:7787778-7787797 | None:intergenic | 35.0% |
| ! | TTGTCTTGGTTGATATTGAC+TGG | + | chr7.1:7789692-7789711 | None:intergenic | 35.0% |
| !! | AACTGAAAGTGTTGATTTGG+AGG | - | chr7.1:7788283-7788302 | MS.gene09806:CDS | 35.0% |
| !! | ACACAATTTCAGCTTTAGAC+AGG | + | chr7.1:7789001-7789020 | None:intergenic | 35.0% |
| !! | ACCTGAATTTTGGTGGTAAT+TGG | + | chr7.1:7787787-7787806 | None:intergenic | 35.0% |
| !! | ACTGAAAGTGTTGATTTGGA+GGG | - | chr7.1:7788284-7788303 | MS.gene09806:CDS | 35.0% |
| !! | CCAAAGATTGGTTTCTTTGA+TGG | - | chr7.1:7790227-7790246 | MS.gene09806:intron | 35.0% |
| !! | TCAAGAGCATCTGTTATTGA+AGG | - | chr7.1:7789615-7789634 | MS.gene09806:intron | 35.0% |
| !!! | ACTGCTTTTTTCACTAATGC+TGG | - | chr7.1:7788027-7788046 | MS.gene09806:CDS | 35.0% |
| !!! | CGGAGTGATTTTAACTTAGA+AGG | - | chr7.1:7790095-7790114 | MS.gene09806:intron | 35.0% |
| !!! | GATTTTATCTCTGAAGTTGC+TGG | + | chr7.1:7791142-7791161 | None:intergenic | 35.0% |
| !!! | TACATCCCAAGTTTTGAAAG+GGG | + | chr7.1:7788879-7788898 | None:intergenic | 35.0% |
| !!! | TCTTTTTTCAGCTGCTAGAA+AGG | - | chr7.1:7788512-7788531 | MS.gene09806:intron | 35.0% |
| !!! | TGATTTTAACTTAGAAGGGC+AGG | - | chr7.1:7790100-7790119 | MS.gene09806:intron | 35.0% |
| AAGAAACCAATCTTTGGCGA+AGG | + | chr7.1:7790224-7790243 | None:intergenic | 40.0% | |
| AATACATGGCTATGGCTTTC+AGG | + | chr7.1:7790352-7790371 | None:intergenic | 40.0% | |
| ATCTATTTCAAAGCCGTCGA+AGG | - | chr7.1:7789374-7789393 | MS.gene09806:intron | 40.0% | |
| ATCTGCGAAAGAGTTTAGCT+TGG | - | chr7.1:7788001-7788020 | MS.gene09806:CDS | 40.0% | |
| ATGTAAGTTACCTTGTTGCG+AGG | + | chr7.1:7788549-7788568 | None:intergenic | 40.0% | |
| CACGTGGAAAAACCAATACA+TGG | + | chr7.1:7790366-7790385 | None:intergenic | 40.0% | |
| CAGCTGAAAAAAGAGAGTCA+AGG | + | chr7.1:7788506-7788525 | None:intergenic | 40.0% | |
| CAGGGTTAACACTTAACAGT+AGG | + | chr7.1:7788779-7788798 | None:intergenic | 40.0% | |
| CATTCAGGTCAAAGTTCCAA+AGG | + | chr7.1:7788908-7788927 | None:intergenic | 40.0% | |
| CTCTTTCGCAGATTGAACTT+AGG | + | chr7.1:7787994-7788013 | None:intergenic | 40.0% | |
| CTGTTTCCCCTTTCAAAACT+TGG | - | chr7.1:7788870-7788889 | MS.gene09806:CDS | 40.0% | |
| CTTGCAGCTTTGCTTTGATT+TGG | + | chr7.1:7790553-7790572 | None:intergenic | 40.0% | |
| GATATTGCACTTCTGTGATG+GGG | + | chr7.1:7788953-7788972 | None:intergenic | 40.0% | |
| GCAAGAAGAAACGTTATTGC+TGG | - | chr7.1:7789780-7789799 | MS.gene09806:intron | 40.0% | |
| GCTAGAGTTACTATCAATGC+TGG | + | chr7.1:7790021-7790040 | None:intergenic | 40.0% | |
| GTGAATCCATTTCGACCTTA+GGG | - | chr7.1:7788240-7788259 | MS.gene09806:CDS | 40.0% | |
| TAAGTTGCTACCGGAAGATT+TGG | + | chr7.1:7789727-7789746 | None:intergenic | 40.0% | |
| TACATCACTGTCGCATGAAA+TGG | - | chr7.1:7790742-7790761 | MS.gene09806:intron | 40.0% | |
| TATCATGATAGACACTGTCC+TGG | + | chr7.1:7790811-7790830 | None:intergenic | 40.0% | |
| TATTGAAGGTTCAAGGGGTA+CGG | - | chr7.1:7789629-7789648 | MS.gene09806:intron | 40.0% | |
| TCAGACACTAATGCAGATCA+AGG | - | chr7.1:7790053-7790072 | MS.gene09806:intron | 40.0% | |
| TCAGCAACTTCCAAATCTTC+CGG | - | chr7.1:7789714-7789733 | MS.gene09806:CDS | 40.0% | |
| TGAAAGCCATAGCCATGTAT+TGG | - | chr7.1:7790351-7790370 | MS.gene09806:intron | 40.0% | |
| TGAAGTTGCCATATCAATGC+TGG | + | chr7.1:7791056-7791075 | None:intergenic | 40.0% | |
| TGGTGGTAATTGGAAGAAAC+GGG | + | chr7.1:7787777-7787796 | None:intergenic | 40.0% | |
| TGTGAATCCATTTCGACCTT+AGG | - | chr7.1:7788239-7788258 | MS.gene09806:CDS | 40.0% | |
| TTGATATGGCAACTTCAGCA+AGG | - | chr7.1:7791059-7791078 | MS.gene09806:intron | 40.0% | |
| TTGCCATATCAATGCTGGTA+GGG | + | chr7.1:7791051-7791070 | None:intergenic | 40.0% | |
| TTGGGATGTAATTCCACCTT+TGG | - | chr7.1:7788889-7788908 | MS.gene09806:CDS | 40.0% | |
| TTTGTAATGCTTTCCAGCAC+AGG | + | chr7.1:7791175-7791194 | None:intergenic | 40.0% | |
| ! | AACACTAAGCGATGCTCTTT+TGG | + | chr7.1:7789436-7789455 | None:intergenic | 40.0% |
| ! | GAATTTGCACTAGGCTTTGT+TGG | + | chr7.1:7789402-7789421 | None:intergenic | 40.0% |
| ! | GTTGATCTTTTCCTGAGTCT+TGG | + | chr7.1:7790882-7790901 | None:intergenic | 40.0% |
| ! | TCTGCGAAAGAGTTTAGCTT+GGG | - | chr7.1:7788002-7788021 | MS.gene09806:CDS | 40.0% |
| ! | TTTTCAGCTGCTAGAAAGGT+TGG | - | chr7.1:7788516-7788535 | MS.gene09806:intron | 40.0% |
| !! | TTTGGAGGGTGATTTGTTTG+AGG | - | chr7.1:7788298-7788317 | MS.gene09806:CDS | 40.0% |
| !!! | GGAAGTTGCTGATTTTGTCT+TGG | + | chr7.1:7789706-7789725 | None:intergenic | 40.0% |
| !!! | TTTTAACTTAGAAGGGCAGG+AGG | - | chr7.1:7790103-7790122 | MS.gene09806:intron | 40.0% |
| AAGTGTAAGGACTGCTTCTG+TGG | - | chr7.1:7790151-7790170 | MS.gene09806:intron | 45.0% | |
| AGTCACTAACAGAACTAGCG+GGG | + | chr7.1:7789938-7789957 | None:intergenic | 45.0% | |
| ATCAACCAACTTACCTGTGC+TGG | - | chr7.1:7791159-7791178 | MS.gene09806:CDS | 45.0% | |
| ATGGCGGTTAGTACTTGCAT+TGG | - | chr7.1:7789496-7789515 | MS.gene09806:CDS | 45.0% | |
| CAGCTGTTGTGAGAGTAATC+GGG | - | chr7.1:7789126-7789145 | MS.gene09806:CDS | 45.0% | |
| CAGTCACTAACAGAACTAGC+GGG | + | chr7.1:7789939-7789958 | None:intergenic | 45.0% | |
| CCAGCTGTTGTGAGAGTAAT+CGG | - | chr7.1:7789125-7789144 | MS.gene09806:CDS | 45.0% | |
| CCAGTCACTAACAGAACTAG+CGG | + | chr7.1:7789940-7789959 | None:intergenic | 45.0% | |
| GGGATCGAGAAGAGAATCAT+CGG | + | chr7.1:7787757-7787776 | None:intergenic | 45.0% | |
| GGTTAAACTATCGCTCCCTA+AGG | + | chr7.1:7788258-7788277 | None:intergenic | 45.0% | |
| GTAGGGGTGACACATTGATA+CGG | + | chr7.1:7791034-7791053 | None:intergenic | 45.0% | |
| GTTGCCATATCAATGCTGGT+AGG | + | chr7.1:7791052-7791071 | None:intergenic | 45.0% | |
| TAGGGGTGACACATTGATAC+GGG | + | chr7.1:7791033-7791052 | None:intergenic | 45.0% | |
| TCAGGTCAAAGTTCCAAAGG+TGG | + | chr7.1:7788905-7788924 | None:intergenic | 45.0% | |
| TGAAAAAGCCTGTCGCTACA+AGG | - | chr7.1:7789343-7789362 | MS.gene09806:intron | 45.0% | |
| TGCCATATCAATGCTGGTAG+GGG | + | chr7.1:7791050-7791069 | None:intergenic | 45.0% | |
| ! | GATTTGGATGTGGGTTTTGC+TGG | + | chr7.1:7790619-7790638 | None:intergenic | 45.0% |
| ! | GGTAGCTGCACTAGCAATTT+TGG | + | chr7.1:7788360-7788379 | None:intergenic | 45.0% |
| ! | GTTGTTTATCGGAGAAGCGT+CGG | + | chr7.1:7787691-7787710 | None:intergenic | 45.0% |
| ! | TCTGTGATGGGGTTACTTTG+TGG | + | chr7.1:7788942-7788961 | None:intergenic | 45.0% |
| ! | TGACTGGCCAGGAGTTAATT+TGG | + | chr7.1:7789676-7789695 | None:intergenic | 45.0% |
| ! | TTGGTTGATATTGACTGGCC+AGG | + | chr7.1:7789687-7789706 | None:intergenic | 45.0% |
| !! | CAGCTTTAGACAGGACAACA+TGG | + | chr7.1:7788992-7789011 | None:intergenic | 45.0% |
| !! | TCTCACGGCTTGCTAAAACA+TGG | - | chr7.1:7790506-7790525 | MS.gene09806:CDS | 45.0% |
| !! | TGTTAGTGACTGGTCTTCAG+AGG | - | chr7.1:7789947-7789966 | MS.gene09806:intron | 45.0% |
| !!! | TTTAGGGGTTTTGGATGCTG+AGG | - | chr7.1:7788145-7788164 | MS.gene09806:CDS | 45.0% |
| !!! | TAGTTTTTTTTTTTTTAAAA+AGG | - | chr7.1:7788627-7788646 | MS.gene09806:intron | 5.0% |
| AAAAGCCTGTCGCTACAAGG+AGG | - | chr7.1:7789346-7789365 | MS.gene09806:intron | 50.0% | |
| AAAGCCTGTCGCTACAAGGA+GGG | - | chr7.1:7789347-7789366 | MS.gene09806:intron | 50.0% | |
| AGGGGTGACACATTGATACG+GGG | + | chr7.1:7791032-7791051 | None:intergenic | 50.0% | |
| ATCGCTCCCTAAGGTCGAAA+TGG | + | chr7.1:7788249-7788268 | None:intergenic | 50.0% | |
| CCACACTCTTCTGTGTCTCA+CGG | - | chr7.1:7790491-7790510 | MS.gene09806:CDS | 50.0% | |
| CCGATTACTCTCACAACAGC+TGG | + | chr7.1:7789128-7789147 | None:intergenic | 50.0% | |
| GCTGGTAGATTCCTTGAAGC+AGG | + | chr7.1:7789110-7789129 | None:intergenic | 50.0% | |
| GCTTTCCAGCACAGGTAAGT+TGG | + | chr7.1:7791167-7791186 | None:intergenic | 50.0% | |
| GGAGCAGGAAGTTCAAGTGA+AGG | - | chr7.1:7790527-7790546 | MS.gene09806:CDS | 50.0% | |
| GTCACTAACAGAACTAGCGG+GGG | + | chr7.1:7789937-7789956 | None:intergenic | 50.0% | |
| TTTCTTGAAGCGAAGCCCGA+TGG | + | chr7.1:7789846-7789865 | None:intergenic | 50.0% | |
| ! | ACCAGAATGTCGTCTAGCTC+TGG | - | chr7.1:7788377-7788396 | MS.gene09806:CDS | 50.0% |
| ! | CTGAAGGTTTTGCAGGAGCT+GGG | + | chr7.1:7790190-7790209 | None:intergenic | 50.0% |
| ! | TGAAGGTTTTGCAGGAGCTG+GGG | + | chr7.1:7790189-7790208 | None:intergenic | 50.0% |
| !! | CACCCCTACCAGCATTGATA+TGG | - | chr7.1:7791045-7791064 | MS.gene09806:intron | 50.0% |
| !! | CCAGAATGTCGTCTAGCTCT+GGG | - | chr7.1:7788378-7788397 | MS.gene09806:CDS | 50.0% |
| !! | CCGCTAGTTCTGTTAGTGAC+TGG | - | chr7.1:7789937-7789956 | MS.gene09806:intron | 50.0% |
| !! | GGCTTGCTAAAACATGGAGC+AGG | - | chr7.1:7790512-7790531 | MS.gene09806:CDS | 50.0% |
| !! | TCGTCTAGCTCTGGGATTCT+GGG | - | chr7.1:7788386-7788405 | MS.gene09806:CDS | 50.0% |
| !! | TGAAGGCATCACCTGCTTCA+AGG | - | chr7.1:7789096-7789115 | MS.gene09806:CDS | 50.0% |
| ACTGTCCTGGTGATCGACAC+AGG | + | chr7.1:7790798-7790817 | None:intergenic | 55.0% | |
| AGCTGCTAGAAAGGTTGGCG+TGG | - | chr7.1:7788521-7788540 | MS.gene09806:intron | 55.0% | |
| CCAGCTCCTGCAAAACCTTC+AGG | - | chr7.1:7790188-7790207 | MS.gene09806:intron | 55.0% | |
| CCAGTTGAACCAGCCCATTG+GGG | + | chr7.1:7788844-7788863 | None:intergenic | 55.0% | |
| CCCAGAGCTAGACGACATTC+TGG | + | chr7.1:7788381-7788400 | None:intergenic | 55.0% | |
| CCCAGTTGAACCAGCCCATT+GGG | + | chr7.1:7788845-7788864 | None:intergenic | 55.0% | |
| CCGTGAGACACAGAAGAGTG+TGG | + | chr7.1:7790494-7790513 | None:intergenic | 55.0% | |
| CGACTGCCTTCGCCAAAGAT+TGG | - | chr7.1:7790215-7790234 | MS.gene09806:intron | 55.0% | |
| GCTAGATGTGCCACCCCAAT+GGG | - | chr7.1:7788828-7788847 | MS.gene09806:CDS | 55.0% | |
| TGCTAGATGTGCCACCCCAA+TGG | - | chr7.1:7788827-7788846 | MS.gene09806:CDS | 55.0% | |
| TGGTGATCGACACAGGTCAG+TGG | + | chr7.1:7790791-7790810 | None:intergenic | 55.0% | |
| ! | ACTGACCTGTGTCGATCACC+AGG | - | chr7.1:7790790-7790809 | MS.gene09806:intron | 55.0% |
| ! | CCTGAAGGTTTTGCAGGAGC+TGG | + | chr7.1:7790191-7790210 | None:intergenic | 55.0% |
| ! | GAAGGTTTTGCAGGAGCTGG+GGG | + | chr7.1:7790188-7790207 | None:intergenic | 55.0% |
| ! | GGCTTTCAGGTGTGTCACCA+AGG | + | chr7.1:7790339-7790358 | None:intergenic | 55.0% |
| !! | CCAATGGGCTGGTTCAACTG+GGG | - | chr7.1:7788843-7788862 | MS.gene09806:CDS | 55.0% |
| !! | CCCAATGGGCTGGTTCAACT+GGG | - | chr7.1:7788842-7788861 | MS.gene09806:CDS | 55.0% |
| !! | CGTCTAGCTCTGGGATTCTG+GGG | - | chr7.1:7788387-7788406 | MS.gene09806:CDS | 55.0% |
| !! | GGCTTTGTTGGCACCTTCGA+CGG | + | chr7.1:7789390-7789409 | None:intergenic | 55.0% |
| !! | GTCGTCTAGCTCTGGGATTC+TGG | - | chr7.1:7788385-7788404 | MS.gene09806:CDS | 55.0% |
| !! | TATCGGAGAAGCGTCGGAGT+CGG | + | chr7.1:7787685-7787704 | None:intergenic | 55.0% |
| AAGCCCGATGGTGTTCTGGC+GGG | + | chr7.1:7789834-7789853 | None:intergenic | 60.0% | |
| ACCACGTGGAGTGTGCACTG+AGG | + | chr7.1:7790462-7790481 | None:intergenic | 60.0% | |
| AGCGAAGCCCGATGGTGTTC+TGG | + | chr7.1:7789838-7789857 | None:intergenic | 60.0% | |
| CCCCAGTTGAACCAGCCCAT+TGG | + | chr7.1:7788846-7788865 | None:intergenic | 60.0% | |
| GAAGCCCGATGGTGTTCTGG+CGG | + | chr7.1:7789835-7789854 | None:intergenic | 60.0% | |
| GACTCCCTCCTTGTAGCGAC+AGG | + | chr7.1:7789354-7789373 | None:intergenic | 60.0% | |
| GGGCAGGAGGCTCAGCAAAA+TGG | - | chr7.1:7790116-7790135 | MS.gene09806:intron | 60.0% | |
| GTTGAACCAGCCCATTGGGG+TGG | + | chr7.1:7788841-7788860 | None:intergenic | 60.0% | |
| TCAGTGCACACTCCACGTGG+TGG | - | chr7.1:7790461-7790480 | MS.gene09806:CDS | 60.0% | |
| TCCTCAGTGCACACTCCACG+TGG | - | chr7.1:7790458-7790477 | MS.gene09806:CDS | 60.0% | |
| TCTTTGGCGAAGGCAGTCGC+AGG | + | chr7.1:7790214-7790233 | None:intergenic | 60.0% | |
| TGGCGTGGTTCCTCGCAACA+AGG | - | chr7.1:7788536-7788555 | MS.gene09806:intron | 60.0% | |
| ! | CGCAGGCCTGAAGGTTTTGC+AGG | + | chr7.1:7790197-7790216 | None:intergenic | 60.0% |
| !! | CCCCAATGGGCTGGTTCAAC+TGG | - | chr7.1:7788841-7788860 | MS.gene09806:CDS | 60.0% |
| !! | TGGGCTGGTTCAACTGGGGA+TGG | - | chr7.1:7788847-7788866 | MS.gene09806:CDS | 60.0% |
| CCCTCCCGCCAGAACACCAT+CGG | - | chr7.1:7789827-7789846 | MS.gene09806:intron | 65.0% | |
| CCGATGGTGTTCTGGCGGGA+GGG | + | chr7.1:7789830-7789849 | None:intergenic | 65.0% | |
| CCTCCCGCCAGAACACCATC+GGG | - | chr7.1:7789828-7789847 | MS.gene09806:intron | 65.0% | |
| GAAGGCAGTCGCAGGCCTGA+AGG | + | chr7.1:7790206-7790225 | None:intergenic | 65.0% | |
| GATGTGCCACCCCAATGGGC+TGG | - | chr7.1:7788832-7788851 | MS.gene09806:CDS | 65.0% | |
| TGTGGTTGCGCTCCACCACG+TGG | + | chr7.1:7790476-7790495 | None:intergenic | 65.0% | |
| CCCGATGGTGTTCTGGCGGG+AGG | + | chr7.1:7789831-7789850 | None:intergenic | 70.0% | |
| CTGGCGGGAGGGCGAGATGA+GGG | + | chr7.1:7789819-7789838 | None:intergenic | 70.0% | |
| TCTGGCGGGAGGGCGAGATG+AGG | + | chr7.1:7789820-7789839 | None:intergenic | 70.0% | |
| GCGGGAGGGCGAGATGAGGG+AGG | + | chr7.1:7789816-7789835 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 7787675 | 7791207 | 7787675 | ID=MS.gene09806 |
| chr7.1 | mRNA | 7787675 | 7791207 | 7787675 | ID=MS.gene09806.t1;Parent=MS.gene09806 |
| chr7.1 | exon | 7791078 | 7791207 | 7791078 | ID=MS.gene09806.t1.exon1;Parent=MS.gene09806.t1 |
| chr7.1 | CDS | 7791078 | 7791207 | 7791078 | ID=cds.MS.gene09806.t1;Parent=MS.gene09806.t1 |
| chr7.1 | exon | 7790834 | 7790998 | 7790834 | ID=MS.gene09806.t1.exon2;Parent=MS.gene09806.t1 |
| chr7.1 | CDS | 7790834 | 7790998 | 7790834 | ID=cds.MS.gene09806.t1;Parent=MS.gene09806.t1 |
| chr7.1 | exon | 7790457 | 7790732 | 7790457 | ID=MS.gene09806.t1.exon3;Parent=MS.gene09806.t1 |
| chr7.1 | CDS | 7790457 | 7790732 | 7790457 | ID=cds.MS.gene09806.t1;Parent=MS.gene09806.t1 |
| chr7.1 | exon | 7790325 | 7790359 | 7790325 | ID=MS.gene09806.t1.exon4;Parent=MS.gene09806.t1 |
| chr7.1 | CDS | 7790325 | 7790359 | 7790325 | ID=cds.MS.gene09806.t1;Parent=MS.gene09806.t1 |
| chr7.1 | exon | 7789689 | 7789787 | 7789689 | ID=MS.gene09806.t1.exon5;Parent=MS.gene09806.t1 |
| chr7.1 | CDS | 7789689 | 7789787 | 7789689 | ID=cds.MS.gene09806.t1;Parent=MS.gene09806.t1 |
| chr7.1 | exon | 7789381 | 7789531 | 7789381 | ID=MS.gene09806.t1.exon6;Parent=MS.gene09806.t1 |
| chr7.1 | CDS | 7789381 | 7789531 | 7789381 | ID=cds.MS.gene09806.t1;Parent=MS.gene09806.t1 |
| chr7.1 | exon | 7788632 | 7789284 | 7788632 | ID=MS.gene09806.t1.exon7;Parent=MS.gene09806.t1 |
| chr7.1 | CDS | 7788632 | 7789284 | 7788632 | ID=cds.MS.gene09806.t1;Parent=MS.gene09806.t1 |
| chr7.1 | exon | 7787675 | 7788430 | 7787675 | ID=MS.gene09806.t1.exon8;Parent=MS.gene09806.t1 |
| chr7.1 | CDS | 7787675 | 7788430 | 7787675 | ID=cds.MS.gene09806.t1;Parent=MS.gene09806.t1 |
| Gene Sequence |
| Protein sequence |
