Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20363.t1 | RHN53668.1 | 90.8 | 754 | 65 | 2 | 1 | 751 | 1 | 753 | 0.00E+00 | 1354 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20363.t1 | O65351 | 43.3 | 736 | 375 | 16 | 43 | 748 | 31 | 754 | 1.0e-158 | 562.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20363.t1 | G7KEU3 | 90.8 | 754 | 65 | 2 | 1 | 751 | 6 | 758 | 0.0e+00 | 1354.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene20363 | 0.817767 | 2.78E-52 | -1.69E-46 |
MS.gene049222 | MS.gene20363 | 0.801188 | 1.01E-48 | -1.69E-46 |
MS.gene049609 | MS.gene20363 | 0.812696 | 3.72E-51 | -1.69E-46 |
MS.gene049656 | MS.gene20363 | 0.808162 | 3.55E-50 | -1.69E-46 |
MS.gene050577 | MS.gene20363 | 0.813004 | 3.19E-51 | -1.69E-46 |
MS.gene050699 | MS.gene20363 | 0.80751 | 4.88E-50 | -1.69E-46 |
MS.gene050772 | MS.gene20363 | 0.81318 | 2.92E-51 | -1.69E-46 |
MS.gene052164 | MS.gene20363 | 0.832563 | 8.80E-56 | -1.69E-46 |
MS.gene052503 | MS.gene20363 | 0.817775 | 2.77E-52 | -1.69E-46 |
MS.gene052823 | MS.gene20363 | 0.819642 | 1.04E-52 | -1.69E-46 |
MS.gene052825 | MS.gene20363 | 0.811696 | 6.15E-51 | -1.69E-46 |
MS.gene053203 | MS.gene20363 | 0.802912 | 4.48E-49 | -1.69E-46 |
MS.gene053436 | MS.gene20363 | 0.816136 | 6.46E-52 | -1.69E-46 |
MS.gene053480 | MS.gene20363 | 0.824542 | 7.63E-54 | -1.69E-46 |
MS.gene053574 | MS.gene20363 | 0.813504 | 2.48E-51 | -1.69E-46 |
MS.gene053626 | MS.gene20363 | 0.8245 | 7.81E-54 | -1.69E-46 |
MS.gene053632 | MS.gene20363 | 0.824602 | 7.38E-54 | -1.69E-46 |
MS.gene053916 | MS.gene20363 | 0.818921 | 1.52E-52 | -1.69E-46 |
MS.gene054927 | MS.gene20363 | 0.834714 | 2.55E-56 | -1.69E-46 |
MS.gene056040 | MS.gene20363 | 0.807104 | 5.95E-50 | -1.69E-46 |
MS.gene056878 | MS.gene20363 | 0.813699 | 2.24E-51 | -1.69E-46 |
MS.gene057048 | MS.gene20363 | 0.800622 | 1.32E-48 | -1.69E-46 |
MS.gene057076 | MS.gene20363 | 0.811949 | 5.42E-51 | -1.69E-46 |
MS.gene057734 | MS.gene20363 | 0.80588 | 1.08E-49 | -1.69E-46 |
MS.gene058419 | MS.gene20363 | 0.802415 | 5.67E-49 | -1.69E-46 |
MS.gene059367 | MS.gene20363 | 0.803575 | 3.27E-49 | -1.69E-46 |
MS.gene059368 | MS.gene20363 | 0.810011 | 1.43E-50 | -1.69E-46 |
MS.gene059455 | MS.gene20363 | 0.800197 | 1.61E-48 | -1.69E-46 |
MS.gene059718 | MS.gene20363 | 0.806494 | 8.00E-50 | -1.69E-46 |
MS.gene060778 | MS.gene20363 | 0.823694 | 1.21E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20363.t1 | MTR_5g011280 | 90.849 | 754 | 65 | 2 | 1 | 751 | 6 | 758 | 0.0 | 1349 |
MS.gene20363.t1 | MTR_5g011270 | 81.067 | 750 | 140 | 2 | 1 | 750 | 6 | 753 | 0.0 | 1222 |
MS.gene20363.t1 | MTR_5g011260 | 80.692 | 751 | 143 | 2 | 1 | 751 | 6 | 754 | 0.0 | 1221 |
MS.gene20363.t1 | MTR_5g011340 | 63.075 | 761 | 258 | 9 | 1 | 750 | 4 | 752 | 0.0 | 947 |
MS.gene20363.t1 | MTR_5g011310 | 62.105 | 760 | 266 | 8 | 1 | 750 | 8 | 755 | 0.0 | 941 |
MS.gene20363.t1 | MTR_5g011320 | 63.158 | 760 | 254 | 10 | 1 | 750 | 4 | 747 | 0.0 | 941 |
MS.gene20363.t1 | MTR_5g011190 | 62.943 | 761 | 260 | 8 | 1 | 751 | 8 | 756 | 0.0 | 941 |
MS.gene20363.t1 | MTR_5g011370 | 63.026 | 760 | 259 | 8 | 1 | 750 | 28 | 775 | 0.0 | 940 |
MS.gene20363.t1 | MTR_4g102400 | 56.510 | 768 | 302 | 14 | 1 | 750 | 1 | 754 | 0.0 | 826 |
MS.gene20363.t1 | MTR_7g098630 | 43.373 | 747 | 376 | 18 | 41 | 749 | 24 | 761 | 0.0 | 575 |
MS.gene20363.t1 | MTR_7g075900 | 42.989 | 756 | 376 | 16 | 43 | 750 | 25 | 773 | 0.0 | 554 |
MS.gene20363.t1 | MTR_5g016120 | 42.416 | 778 | 391 | 17 | 4 | 746 | 3 | 758 | 0.0 | 551 |
MS.gene20363.t1 | MTR_4g095360 | 42.400 | 750 | 383 | 18 | 34 | 748 | 19 | 754 | 0.0 | 541 |
MS.gene20363.t1 | MTR_2g042130 | 42.959 | 703 | 364 | 12 | 80 | 750 | 77 | 774 | 0.0 | 537 |
MS.gene20363.t1 | MTR_0047s0120 | 41.410 | 780 | 397 | 19 | 3 | 747 | 1 | 755 | 3.25e-178 | 529 |
MS.gene20363.t1 | MTR_8g022870 | 43.576 | 755 | 369 | 19 | 43 | 748 | 29 | 775 | 1.01e-175 | 523 |
MS.gene20363.t1 | MTR_8g021130 | 42.308 | 754 | 369 | 20 | 43 | 747 | 37 | 773 | 4.63e-175 | 521 |
MS.gene20363.t1 | MTR_4g125180 | 42.838 | 747 | 372 | 18 | 39 | 750 | 27 | 753 | 3.75e-171 | 511 |
MS.gene20363.t1 | MTR_4g073540 | 40.263 | 760 | 388 | 19 | 37 | 748 | 26 | 767 | 1.24e-170 | 510 |
MS.gene20363.t1 | MTR_1g102350 | 40.555 | 757 | 389 | 16 | 43 | 751 | 36 | 779 | 1.28e-170 | 510 |
MS.gene20363.t1 | MTR_1g018510 | 40.990 | 727 | 375 | 14 | 62 | 747 | 11 | 724 | 5.41e-166 | 496 |
MS.gene20363.t1 | MTR_3g102810 | 40.964 | 747 | 382 | 17 | 43 | 747 | 24 | 753 | 4.86e-162 | 487 |
MS.gene20363.t1 | MTR_3g082200 | 38.298 | 752 | 414 | 14 | 39 | 748 | 26 | 769 | 3.17e-154 | 468 |
MS.gene20363.t1 | MTR_8g024390 | 38.349 | 751 | 395 | 21 | 44 | 748 | 29 | 757 | 1.00e-153 | 466 |
MS.gene20363.t1 | MTR_8g024420 | 39.569 | 743 | 360 | 22 | 60 | 748 | 14 | 721 | 1.69e-151 | 459 |
MS.gene20363.t1 | MTR_8g083220 | 38.575 | 744 | 405 | 17 | 44 | 748 | 44 | 774 | 4.08e-150 | 457 |
MS.gene20363.t1 | MTR_8g072440 | 39.048 | 735 | 401 | 17 | 44 | 748 | 35 | 752 | 1.60e-149 | 455 |
MS.gene20363.t1 | MTR_8g072440 | 40.171 | 702 | 375 | 16 | 75 | 748 | 26 | 710 | 2.04e-149 | 453 |
MS.gene20363.t1 | MTR_1g079120 | 37.383 | 749 | 405 | 19 | 43 | 748 | 33 | 760 | 9.11e-148 | 451 |
MS.gene20363.t1 | MTR_7g098070 | 37.659 | 709 | 391 | 15 | 77 | 748 | 67 | 761 | 3.05e-147 | 449 |
MS.gene20363.t1 | MTR_4g134320 | 38.169 | 710 | 387 | 15 | 77 | 748 | 70 | 765 | 2.22e-146 | 447 |
MS.gene20363.t1 | MTR_8g079900 | 38.336 | 733 | 396 | 17 | 44 | 748 | 37 | 741 | 5.06e-146 | 445 |
MS.gene20363.t1 | MTR_5g025010 | 40.180 | 667 | 360 | 15 | 75 | 713 | 31 | 686 | 6.54e-146 | 444 |
MS.gene20363.t1 | MTR_5g025010 | 40.180 | 667 | 360 | 15 | 75 | 713 | 63 | 718 | 1.32e-145 | 445 |
MS.gene20363.t1 | MTR_8g024380 | 37.037 | 756 | 398 | 18 | 44 | 748 | 30 | 758 | 5.27e-145 | 443 |
MS.gene20363.t1 | MTR_7g118080 | 36.815 | 766 | 393 | 19 | 38 | 748 | 26 | 755 | 5.50e-145 | 443 |
MS.gene20363.t1 | MTR_7g104200 | 39.195 | 745 | 379 | 29 | 44 | 749 | 33 | 742 | 1.27e-144 | 442 |
MS.gene20363.t1 | MTR_2g049200 | 38.026 | 760 | 383 | 23 | 44 | 748 | 29 | 755 | 1.06e-143 | 440 |
MS.gene20363.t1 | MTR_8g033150 | 38.420 | 734 | 395 | 17 | 44 | 748 | 19 | 724 | 1.12e-143 | 439 |
MS.gene20363.t1 | MTR_8g033150 | 38.420 | 734 | 395 | 17 | 44 | 748 | 46 | 751 | 3.03e-143 | 438 |
MS.gene20363.t1 | MTR_7g075890 | 37.082 | 747 | 411 | 17 | 30 | 748 | 182 | 897 | 5.89e-142 | 439 |
MS.gene20363.t1 | MTR_3g082200 | 40.061 | 654 | 350 | 13 | 129 | 748 | 1 | 646 | 6.78e-142 | 431 |
MS.gene20363.t1 | MTR_4g103450 | 38.543 | 755 | 408 | 18 | 42 | 750 | 1 | 745 | 3.66e-141 | 433 |
MS.gene20363.t1 | MTR_1g078110 | 37.237 | 760 | 386 | 23 | 44 | 748 | 30 | 753 | 3.83e-141 | 433 |
MS.gene20363.t1 | MTR_4g103490 | 38.806 | 737 | 392 | 17 | 63 | 750 | 59 | 785 | 1.47e-140 | 432 |
MS.gene20363.t1 | MTR_3g104930 | 39.301 | 715 | 385 | 19 | 71 | 746 | 55 | 759 | 1.50e-140 | 432 |
MS.gene20363.t1 | MTR_5g096750 | 39.945 | 721 | 380 | 21 | 65 | 748 | 60 | 764 | 8.90e-139 | 427 |
MS.gene20363.t1 | MTR_4g103480 | 38.306 | 744 | 409 | 17 | 47 | 750 | 55 | 788 | 1.31e-138 | 427 |
MS.gene20363.t1 | MTR_8g042670 | 38.506 | 696 | 390 | 15 | 80 | 748 | 73 | 757 | 8.01e-138 | 424 |
MS.gene20363.t1 | MTR_4g103495 | 41.543 | 674 | 348 | 14 | 63 | 697 | 56 | 722 | 4.78e-137 | 423 |
MS.gene20363.t1 | MTR_8g079900 | 39.611 | 669 | 348 | 17 | 108 | 748 | 3 | 643 | 1.44e-136 | 417 |
MS.gene20363.t1 | MTR_4g103430 | 38.211 | 738 | 405 | 18 | 51 | 748 | 42 | 768 | 1.67e-136 | 422 |
MS.gene20363.t1 | MTR_7g079310 | 35.620 | 758 | 413 | 21 | 43 | 748 | 29 | 763 | 2.71e-136 | 421 |
MS.gene20363.t1 | MTR_2g018125 | 39.046 | 776 | 395 | 21 | 39 | 750 | 24 | 785 | 5.38e-136 | 421 |
MS.gene20363.t1 | MTR_8g024370 | 37.995 | 758 | 387 | 27 | 44 | 748 | 29 | 756 | 6.01e-136 | 420 |
MS.gene20363.t1 | MTR_2g018135 | 39.386 | 749 | 379 | 20 | 63 | 750 | 50 | 784 | 1.28e-134 | 417 |
MS.gene20363.t1 | MTR_3g082200 | 40.325 | 615 | 331 | 12 | 162 | 748 | 25 | 631 | 6.63e-134 | 410 |
MS.gene20363.t1 | MTR_4g103400 | 36.582 | 749 | 418 | 17 | 47 | 748 | 38 | 776 | 6.60e-133 | 412 |
MS.gene20363.t1 | MTR_7g079300 | 35.911 | 763 | 406 | 22 | 43 | 748 | 29 | 765 | 2.45e-132 | 410 |
MS.gene20363.t1 | MTR_8g042710 | 37.052 | 726 | 401 | 16 | 65 | 748 | 52 | 763 | 2.09e-131 | 408 |
MS.gene20363.t1 | MTR_3g061110 | 35.878 | 786 | 432 | 21 | 1 | 748 | 1 | 752 | 5.33e-131 | 407 |
MS.gene20363.t1 | MTR_3g114420 | 38.248 | 719 | 390 | 18 | 70 | 748 | 60 | 764 | 6.92e-131 | 407 |
MS.gene20363.t1 | MTR_4g053630 | 37.399 | 746 | 406 | 21 | 44 | 748 | 4 | 729 | 1.76e-130 | 405 |
MS.gene20363.t1 | MTR_7g081420 | 36.136 | 797 | 419 | 25 | 11 | 748 | 19 | 784 | 7.05e-126 | 394 |
MS.gene20363.t1 | MTR_4g103495 | 41.224 | 621 | 324 | 12 | 162 | 748 | 10 | 623 | 2.09e-125 | 388 |
MS.gene20363.t1 | MTR_7g081750 | 36.078 | 765 | 418 | 21 | 47 | 748 | 41 | 797 | 3.67e-125 | 393 |
MS.gene20363.t1 | MTR_8g042670 | 38.523 | 623 | 350 | 13 | 149 | 748 | 21 | 633 | 6.17e-123 | 382 |
MS.gene20363.t1 | MTR_8g006680 | 36.401 | 728 | 413 | 21 | 37 | 748 | 29 | 722 | 2.53e-122 | 383 |
MS.gene20363.t1 | MTR_8g005300 | 36.401 | 728 | 413 | 21 | 37 | 748 | 29 | 722 | 2.53e-122 | 383 |
MS.gene20363.t1 | MTR_8g005640 | 36.401 | 728 | 413 | 21 | 37 | 748 | 29 | 722 | 2.53e-122 | 383 |
MS.gene20363.t1 | MTR_4g053630 | 39.013 | 669 | 348 | 20 | 120 | 748 | 4 | 652 | 2.57e-122 | 381 |
MS.gene20363.t1 | MTR_1g007030 | 36.339 | 732 | 416 | 21 | 37 | 748 | 31 | 732 | 2.58e-121 | 381 |
MS.gene20363.t1 | MTR_7g034380 | 35.953 | 687 | 400 | 15 | 77 | 748 | 30 | 691 | 9.84e-121 | 378 |
MS.gene20363.t1 | MTR_4g053635 | 37.590 | 697 | 366 | 20 | 95 | 748 | 2 | 672 | 2.13e-120 | 377 |
MS.gene20363.t1 | MTR_5g055920 | 37.688 | 666 | 360 | 17 | 123 | 750 | 20 | 668 | 6.04e-119 | 372 |
MS.gene20363.t1 | MTR_1g006990 | 35.967 | 734 | 418 | 22 | 37 | 748 | 31 | 734 | 9.45e-119 | 374 |
MS.gene20363.t1 | MTR_7g081500 | 37.466 | 734 | 384 | 25 | 72 | 748 | 67 | 782 | 1.21e-118 | 375 |
MS.gene20363.t1 | MTR_5g085690 | 35.751 | 772 | 420 | 22 | 43 | 749 | 29 | 789 | 4.08e-118 | 374 |
MS.gene20363.t1 | MTR_6g055570 | 36.311 | 694 | 382 | 18 | 79 | 748 | 72 | 729 | 7.43e-118 | 372 |
MS.gene20363.t1 | MTR_7g081580 | 36.126 | 764 | 416 | 26 | 44 | 748 | 33 | 783 | 4.78e-117 | 372 |
MS.gene20363.t1 | MTR_1g048110 | 35.102 | 735 | 430 | 19 | 31 | 748 | 26 | 730 | 2.14e-116 | 368 |
MS.gene20363.t1 | MTR_7g081380 | 35.669 | 785 | 402 | 25 | 47 | 748 | 42 | 806 | 2.19e-116 | 370 |
MS.gene20363.t1 | MTR_3g010080 | 36.138 | 725 | 415 | 19 | 38 | 743 | 31 | 726 | 3.88e-116 | 367 |
MS.gene20363.t1 | MTR_3g464790 | 37.980 | 703 | 368 | 21 | 75 | 746 | 64 | 729 | 5.22e-114 | 362 |
MS.gene20363.t1 | MTR_8g005710 | 34.449 | 717 | 405 | 17 | 63 | 748 | 16 | 698 | 1.34e-113 | 360 |
MS.gene20363.t1 | MTR_7g481600 | 36.257 | 764 | 415 | 26 | 44 | 748 | 33 | 783 | 3.38e-112 | 359 |
MS.gene20363.t1 | MTR_3g114410 | 42.164 | 536 | 256 | 17 | 71 | 568 | 61 | 580 | 6.94e-107 | 338 |
MS.gene20363.t1 | MTR_6g055410 | 34.795 | 707 | 385 | 19 | 65 | 748 | 58 | 711 | 4.65e-106 | 340 |
MS.gene20363.t1 | MTR_8g042710 | 39.122 | 547 | 284 | 14 | 64 | 571 | 51 | 587 | 1.83e-96 | 313 |
MS.gene20363.t1 | MTR_2g044630 | 32.925 | 735 | 410 | 20 | 37 | 748 | 31 | 705 | 6.84e-96 | 313 |
MS.gene20363.t1 | MTR_2g042640 | 35.498 | 662 | 324 | 24 | 63 | 702 | 25 | 605 | 5.20e-94 | 305 |
MS.gene20363.t1 | MTR_2g046740 | 32.713 | 752 | 403 | 24 | 81 | 750 | 110 | 840 | 8.52e-91 | 303 |
MS.gene20363.t1 | MTR_2g037850 | 33.375 | 797 | 413 | 34 | 31 | 746 | 52 | 811 | 5.92e-89 | 297 |
MS.gene20363.t1 | MTR_4g071560 | 36.909 | 550 | 285 | 12 | 46 | 569 | 7 | 520 | 1.62e-87 | 286 |
MS.gene20363.t1 | MTR_8g089230 | 32.210 | 742 | 417 | 25 | 81 | 749 | 118 | 846 | 1.55e-86 | 291 |
MS.gene20363.t1 | MTR_4g127480 | 33.289 | 748 | 403 | 31 | 75 | 746 | 84 | 811 | 4.69e-86 | 290 |
MS.gene20363.t1 | MTR_3g452290 | 33.692 | 650 | 336 | 21 | 109 | 748 | 4 | 568 | 5.29e-84 | 278 |
MS.gene20363.t1 | MTR_3g451220 | 33.692 | 650 | 336 | 21 | 109 | 748 | 4 | 568 | 5.29e-84 | 278 |
MS.gene20363.t1 | MTR_4g132620 | 30.307 | 749 | 417 | 25 | 81 | 749 | 92 | 815 | 3.40e-76 | 263 |
MS.gene20363.t1 | MTR_2g042650 | 30.495 | 728 | 374 | 21 | 37 | 748 | 31 | 642 | 9.13e-73 | 249 |
MS.gene20363.t1 | MTR_5g081100 | 35.714 | 476 | 244 | 14 | 41 | 504 | 1 | 426 | 1.38e-65 | 224 |
MS.gene20363.t1 | MTR_7g079295 | 38.855 | 332 | 169 | 7 | 43 | 342 | 29 | 358 | 1.91e-62 | 218 |
MS.gene20363.t1 | MTR_7g079295 | 32.680 | 153 | 91 | 4 | 602 | 748 | 363 | 509 | 1.74e-14 | 77.4 |
MS.gene20363.t1 | MTR_6g075370 | 35.325 | 385 | 224 | 8 | 38 | 403 | 28 | 406 | 1.03e-58 | 211 |
MS.gene20363.t1 | MTR_6g075370 | 39.357 | 249 | 132 | 3 | 483 | 720 | 423 | 663 | 9.03e-49 | 183 |
MS.gene20363.t1 | MTR_8g027260 | 36.657 | 341 | 211 | 4 | 36 | 374 | 30 | 367 | 2.67e-57 | 207 |
MS.gene20363.t1 | MTR_8g027260 | 38.944 | 303 | 161 | 9 | 458 | 748 | 361 | 651 | 2.63e-49 | 184 |
MS.gene20363.t1 | MTR_3g114160 | 40.064 | 312 | 149 | 7 | 76 | 381 | 3 | 282 | 4.70e-52 | 186 |
MS.gene20363.t1 | MTR_5g011300 | 84.536 | 97 | 15 | 0 | 537 | 633 | 1 | 97 | 2.96e-48 | 165 |
MS.gene20363.t1 | MTR_5g081280 | 33.333 | 309 | 163 | 10 | 42 | 339 | 21 | 297 | 7.24e-40 | 149 |
MS.gene20363.t1 | MTR_2g070250 | 34.302 | 344 | 184 | 12 | 164 | 500 | 98 | 406 | 7.25e-39 | 149 |
MS.gene20363.t1 | MTR_4g126230 | 32.645 | 242 | 135 | 5 | 448 | 674 | 20 | 248 | 5.85e-35 | 134 |
MS.gene20363.t1 | MTR_3g114140 | 36.719 | 256 | 146 | 6 | 462 | 704 | 169 | 421 | 1.07e-33 | 134 |
MS.gene20363.t1 | MTR_3g114140 | 40.110 | 182 | 64 | 4 | 205 | 370 | 31 | 183 | 3.29e-22 | 100 |
MS.gene20363.t1 | MTR_5g044060 | 49.265 | 136 | 60 | 2 | 474 | 600 | 3 | 138 | 8.11e-31 | 119 |
MS.gene20363.t1 | MTR_8g092940 | 36.893 | 206 | 120 | 6 | 84 | 285 | 32 | 231 | 1.28e-30 | 120 |
MS.gene20363.t1 | MTR_4g053665 | 32.669 | 251 | 123 | 6 | 503 | 748 | 1 | 210 | 1.17e-29 | 117 |
MS.gene20363.t1 | MTR_2g070260 | 34.634 | 205 | 121 | 5 | 537 | 738 | 1 | 195 | 7.62e-27 | 109 |
MS.gene20363.t1 | MTR_7g097250 | 32.864 | 213 | 103 | 7 | 345 | 554 | 1 | 176 | 5.81e-20 | 88.6 |
MS.gene20363.t1 | MTR_5g081130 | 32.121 | 165 | 102 | 3 | 590 | 750 | 15 | 173 | 1.06e-19 | 88.6 |
MS.gene20363.t1 | MTR_7g081660 | 35.976 | 164 | 97 | 6 | 587 | 748 | 395 | 552 | 6.35e-16 | 82.0 |
MS.gene20363.t1 | MTR_3g065240 | 24.623 | 398 | 147 | 14 | 244 | 635 | 4 | 254 | 1.17e-14 | 75.5 |
MS.gene20363.t1 | MTR_5g011380 | 54.902 | 51 | 23 | 0 | 700 | 750 | 8 | 58 | 1.43e-12 | 63.9 |
MS.gene20363.t1 | MTR_3g005755 | 62.222 | 45 | 17 | 0 | 529 | 573 | 238 | 282 | 1.03e-11 | 67.0 |
MS.gene20363.t1 | MTR_8g027660 | 27.179 | 195 | 107 | 7 | 561 | 748 | 80 | 246 | 2.74e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20363.t1 | AT5G67360 | 43.342 | 736 | 375 | 16 | 43 | 748 | 31 | 754 | 0.0 | 561 |
MS.gene20363.t1 | AT1G04110 | 41.509 | 795 | 393 | 21 | 1 | 748 | 1 | 770 | 0.0 | 559 |
MS.gene20363.t1 | AT3G14067 | 43.658 | 749 | 370 | 18 | 41 | 748 | 30 | 767 | 0.0 | 557 |
MS.gene20363.t1 | AT3G14240 | 42.420 | 752 | 378 | 19 | 43 | 748 | 27 | 769 | 5.57e-178 | 529 |
MS.gene20363.t1 | AT2G05920 | 42.062 | 737 | 378 | 16 | 43 | 747 | 29 | 748 | 1.54e-177 | 527 |
MS.gene20363.t1 | AT4G34980 | 41.022 | 724 | 378 | 14 | 62 | 748 | 47 | 758 | 1.80e-174 | 520 |
MS.gene20363.t1 | AT5G51750 | 40.080 | 751 | 399 | 18 | 43 | 751 | 36 | 777 | 9.81e-165 | 495 |
MS.gene20363.t1 | AT1G01900 | 40.454 | 749 | 387 | 19 | 43 | 750 | 43 | 773 | 1.13e-162 | 489 |
MS.gene20363.t1 | AT5G59810 | 38.740 | 746 | 405 | 17 | 43 | 748 | 41 | 774 | 1.11e-152 | 464 |
MS.gene20363.t1 | AT2G04160 | 39.221 | 719 | 398 | 15 | 63 | 748 | 58 | 770 | 6.27e-147 | 449 |
MS.gene20363.t1 | AT5G59090 | 39.528 | 721 | 395 | 16 | 44 | 748 | 33 | 728 | 2.57e-146 | 446 |
MS.gene20363.t1 | AT5G59090 | 39.390 | 721 | 394 | 17 | 44 | 748 | 33 | 726 | 5.84e-144 | 440 |
MS.gene20363.t1 | AT5G59090 | 39.528 | 721 | 390 | 17 | 44 | 748 | 33 | 723 | 2.04e-143 | 438 |
MS.gene20363.t1 | AT5G59120 | 38.514 | 727 | 394 | 16 | 44 | 748 | 32 | 727 | 3.33e-143 | 437 |
MS.gene20363.t1 | AT5G59100 | 38.295 | 739 | 402 | 19 | 36 | 748 | 27 | 737 | 1.64e-142 | 436 |
MS.gene20363.t1 | AT4G00230 | 38.731 | 741 | 399 | 20 | 36 | 748 | 30 | 743 | 1.18e-141 | 434 |
MS.gene20363.t1 | AT5G03620 | 37.772 | 781 | 409 | 28 | 12 | 746 | 7 | 756 | 9.71e-141 | 432 |
MS.gene20363.t1 | AT1G20160 | 38.429 | 713 | 387 | 17 | 75 | 748 | 23 | 722 | 9.38e-138 | 423 |
MS.gene20363.t1 | AT1G20160 | 38.429 | 713 | 387 | 17 | 75 | 748 | 62 | 761 | 6.32e-137 | 422 |
MS.gene20363.t1 | AT4G10550 | 38.141 | 721 | 384 | 19 | 72 | 748 | 8 | 710 | 2.14e-136 | 420 |
MS.gene20363.t1 | AT4G10550 | 38.141 | 721 | 384 | 19 | 72 | 748 | 8 | 710 | 2.14e-136 | 420 |
MS.gene20363.t1 | AT4G10550 | 38.141 | 721 | 384 | 19 | 72 | 748 | 64 | 766 | 5.38e-136 | 421 |
MS.gene20363.t1 | AT4G10520 | 36.921 | 734 | 415 | 16 | 44 | 748 | 30 | 744 | 5.53e-136 | 420 |
MS.gene20363.t1 | AT4G10550 | 38.141 | 721 | 384 | 19 | 72 | 748 | 80 | 782 | 1.99e-135 | 419 |
MS.gene20363.t1 | AT5G58840 | 37.037 | 729 | 394 | 20 | 36 | 748 | 27 | 706 | 1.56e-132 | 409 |
MS.gene20363.t1 | AT4G10540 | 37.604 | 718 | 393 | 16 | 72 | 748 | 60 | 763 | 2.38e-132 | 411 |
MS.gene20363.t1 | AT5G67090 | 35.334 | 733 | 391 | 20 | 44 | 736 | 25 | 714 | 1.87e-131 | 407 |
MS.gene20363.t1 | AT4G10510 | 37.744 | 718 | 390 | 17 | 72 | 748 | 8 | 709 | 3.19e-131 | 406 |
MS.gene20363.t1 | AT1G32960 | 36.170 | 752 | 428 | 17 | 36 | 748 | 27 | 765 | 3.83e-131 | 408 |
MS.gene20363.t1 | AT3G46850 | 37.042 | 737 | 412 | 20 | 36 | 748 | 26 | 734 | 4.53e-131 | 406 |
MS.gene20363.t1 | AT4G10510 | 38.028 | 710 | 383 | 17 | 80 | 748 | 1 | 694 | 6.86e-131 | 405 |
MS.gene20363.t1 | AT4G10510 | 37.744 | 718 | 390 | 17 | 72 | 748 | 52 | 753 | 9.55e-131 | 406 |
MS.gene20363.t1 | AT4G10510 | 37.744 | 718 | 390 | 17 | 72 | 748 | 64 | 765 | 1.06e-130 | 407 |
MS.gene20363.t1 | AT1G32940 | 36.643 | 715 | 404 | 16 | 72 | 748 | 8 | 711 | 2.94e-130 | 404 |
MS.gene20363.t1 | AT1G32940 | 36.643 | 715 | 404 | 16 | 72 | 748 | 8 | 711 | 2.94e-130 | 404 |
MS.gene20363.t1 | AT5G59130 | 37.625 | 699 | 389 | 18 | 66 | 748 | 19 | 686 | 3.10e-130 | 403 |
MS.gene20363.t1 | AT5G59130 | 36.599 | 735 | 416 | 19 | 30 | 748 | 25 | 725 | 3.86e-130 | 404 |
MS.gene20363.t1 | AT5G45650 | 38.224 | 777 | 393 | 22 | 44 | 748 | 27 | 788 | 5.07e-130 | 405 |
MS.gene20363.t1 | AT5G45650 | 38.224 | 777 | 393 | 22 | 44 | 748 | 27 | 788 | 5.07e-130 | 405 |
MS.gene20363.t1 | AT1G32940 | 35.819 | 751 | 430 | 18 | 37 | 748 | 25 | 762 | 7.17e-130 | 404 |
MS.gene20363.t1 | AT1G32950 | 36.189 | 782 | 431 | 18 | 6 | 748 | 9 | 761 | 5.26e-129 | 402 |
MS.gene20363.t1 | AT5G58830 | 37.000 | 700 | 374 | 18 | 66 | 748 | 56 | 705 | 1.14e-128 | 399 |
MS.gene20363.t1 | AT5G59190 | 38.880 | 661 | 353 | 18 | 80 | 719 | 32 | 662 | 1.46e-128 | 398 |
MS.gene20363.t1 | AT1G32950 | 37.709 | 716 | 394 | 16 | 72 | 748 | 8 | 710 | 1.62e-128 | 399 |
MS.gene20363.t1 | AT5G59130 | 36.599 | 735 | 412 | 20 | 30 | 748 | 25 | 721 | 2.55e-128 | 399 |
MS.gene20363.t1 | AT3G46840 | 37.279 | 735 | 412 | 21 | 36 | 748 | 27 | 734 | 2.70e-128 | 399 |
MS.gene20363.t1 | AT5G59130 | 36.599 | 735 | 406 | 21 | 30 | 748 | 25 | 715 | 1.16e-127 | 397 |
MS.gene20363.t1 | AT1G66220 | 34.699 | 781 | 428 | 17 | 4 | 748 | 10 | 744 | 3.89e-127 | 397 |
MS.gene20363.t1 | AT4G10530 | 35.190 | 736 | 416 | 15 | 44 | 748 | 30 | 735 | 1.06e-126 | 395 |
MS.gene20363.t1 | AT4G26330 | 36.414 | 725 | 401 | 16 | 72 | 750 | 13 | 723 | 9.50e-124 | 387 |
MS.gene20363.t1 | AT4G21630 | 35.696 | 762 | 410 | 16 | 31 | 748 | 28 | 753 | 1.19e-123 | 387 |
MS.gene20363.t1 | AT5G58820 | 36.499 | 737 | 402 | 19 | 28 | 748 | 14 | 700 | 2.02e-123 | 385 |
MS.gene20363.t1 | AT4G21650 | 35.789 | 760 | 404 | 15 | 38 | 748 | 36 | 760 | 4.35e-123 | 386 |
MS.gene20363.t1 | AT1G20150 | 37.291 | 716 | 384 | 22 | 84 | 748 | 69 | 770 | 9.41e-122 | 383 |
MS.gene20363.t1 | AT4G26330 | 35.724 | 739 | 401 | 17 | 72 | 750 | 13 | 737 | 5.74e-120 | 377 |
MS.gene20363.t1 | AT1G66210 | 35.249 | 783 | 418 | 22 | 6 | 748 | 17 | 750 | 6.37e-120 | 378 |
MS.gene20363.t1 | AT4G21326 | 35.795 | 704 | 391 | 15 | 77 | 748 | 13 | 687 | 2.45e-117 | 369 |
MS.gene20363.t1 | AT5G03620 | 40.986 | 588 | 297 | 20 | 12 | 568 | 7 | 575 | 3.49e-117 | 365 |
MS.gene20363.t1 | AT5G11940 | 35.574 | 714 | 395 | 17 | 72 | 748 | 67 | 752 | 3.32e-116 | 368 |
MS.gene20363.t1 | AT4G21323 | 35.634 | 710 | 388 | 22 | 77 | 748 | 115 | 793 | 3.26e-110 | 353 |
MS.gene20363.t1 | AT4G00230 | 41.081 | 555 | 289 | 14 | 36 | 568 | 30 | 568 | 3.26e-109 | 345 |
MS.gene20363.t1 | AT4G15040 | 35.085 | 704 | 405 | 18 | 63 | 748 | 16 | 685 | 1.24e-108 | 346 |
MS.gene20363.t1 | AT4G15040 | 35.085 | 704 | 405 | 18 | 63 | 748 | 16 | 685 | 1.24e-108 | 346 |
MS.gene20363.t1 | AT1G32970 | 34.789 | 710 | 400 | 17 | 74 | 748 | 41 | 722 | 1.82e-106 | 342 |
MS.gene20363.t1 | AT5G45640 | 35.381 | 749 | 367 | 23 | 88 | 751 | 38 | 754 | 5.17e-106 | 341 |
MS.gene20363.t1 | AT5G58840 | 37.798 | 545 | 293 | 12 | 36 | 571 | 27 | 534 | 4.47e-100 | 319 |
MS.gene20363.t1 | AT1G32940 | 36.380 | 569 | 316 | 15 | 37 | 568 | 25 | 584 | 3.92e-93 | 303 |
MS.gene20363.t1 | AT2G39850 | 31.962 | 729 | 408 | 25 | 80 | 748 | 65 | 765 | 4.94e-93 | 307 |
MS.gene20363.t1 | AT2G19170 | 33.070 | 759 | 391 | 30 | 75 | 746 | 80 | 808 | 8.28e-90 | 300 |
MS.gene20363.t1 | AT2G19170 | 33.070 | 759 | 391 | 30 | 75 | 746 | 80 | 808 | 8.28e-90 | 300 |
MS.gene20363.t1 | AT4G30020 | 32.855 | 767 | 402 | 31 | 31 | 716 | 48 | 782 | 1.08e-86 | 291 |
MS.gene20363.t1 | AT4G30020 | 32.855 | 767 | 402 | 31 | 31 | 716 | 48 | 782 | 1.08e-86 | 291 |
MS.gene20363.t1 | AT4G30020 | 32.855 | 767 | 402 | 31 | 31 | 716 | 48 | 782 | 1.08e-86 | 291 |
MS.gene20363.t1 | AT4G30020 | 32.855 | 767 | 402 | 31 | 31 | 716 | 48 | 782 | 1.08e-86 | 291 |
MS.gene20363.t1 | AT1G30600 | 31.465 | 785 | 425 | 27 | 52 | 750 | 71 | 828 | 2.09e-86 | 291 |
MS.gene20363.t1 | AT4G20430 | 31.769 | 746 | 415 | 27 | 81 | 748 | 119 | 848 | 2.81e-85 | 288 |
MS.gene20363.t1 | AT4G20430 | 31.769 | 746 | 415 | 27 | 81 | 748 | 119 | 848 | 2.81e-85 | 288 |
MS.gene20363.t1 | AT5G44530 | 30.388 | 747 | 424 | 26 | 81 | 749 | 106 | 834 | 8.86e-84 | 284 |
MS.gene20363.t1 | AT1G20160 | 39.651 | 459 | 244 | 10 | 71 | 504 | 58 | 508 | 2.35e-83 | 275 |
MS.gene20363.t1 | AT5G44530 | 29.404 | 772 | 424 | 27 | 81 | 749 | 106 | 859 | 8.36e-79 | 271 |
MS.gene20363.t1 | AT1G62340 | 32.443 | 749 | 408 | 29 | 81 | 748 | 98 | 829 | 5.46e-75 | 259 |
MS.gene20363.t1 | AT5G58840 | 35.881 | 471 | 263 | 11 | 36 | 504 | 27 | 460 | 7.17e-73 | 245 |
MS.gene20363.t1 | AT4G21640 | 41.914 | 303 | 163 | 5 | 452 | 748 | 432 | 727 | 2.92e-58 | 211 |
MS.gene20363.t1 | AT4G21640 | 34.795 | 365 | 197 | 7 | 33 | 358 | 32 | 394 | 7.90e-51 | 190 |
MS.gene20363.t1 | AT5G44530 | 30.876 | 502 | 279 | 17 | 81 | 521 | 106 | 600 | 5.76e-50 | 186 |
MS.gene20363.t1 | AT4G20430 | 37.063 | 286 | 148 | 7 | 81 | 337 | 119 | 401 | 4.50e-44 | 171 |
MS.gene20363.t1 | AT4G20430 | 34.386 | 285 | 158 | 11 | 484 | 748 | 549 | 824 | 1.77e-35 | 144 |
MS.gene20363.t1 | AT1G32980 | 44.086 | 186 | 99 | 3 | 533 | 715 | 3 | 186 | 1.38e-41 | 150 |
MS.gene20363.t1 | AT5G59110 | 35.329 | 167 | 94 | 7 | 593 | 751 | 8 | 168 | 2.16e-23 | 98.2 |
Find 185 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTAGAGCCTTTGCTTCTTC+TGG | 0.112206 | 5.1:+4797360 | None:intergenic |
ACCTCTATTCTCTTTGTCTT+TGG | 0.124601 | 5.1:+4795499 | None:intergenic |
GGATCTATTAAGTGGGTTTC+TGG | 0.163901 | 5.1:-4795458 | MS.gene20363:CDS |
TCAGAATTCCTGGGCTTTCT+TGG | 0.175760 | 5.1:+4796161 | None:intergenic |
GTACTTTCAATCTCCCTTAA+TGG | 0.186326 | 5.1:-4796826 | MS.gene20363:CDS |
TTATTCAAAGGAACTGTTAT+TGG | 0.212356 | 5.1:-4796232 | MS.gene20363:CDS |
CTCGGTAAAGGGATCATAAT+TGG | 0.217745 | 5.1:-4797222 | MS.gene20363:CDS |
AATCAGCTGGTTTAAGTCTT+TGG | 0.218973 | 5.1:+4795906 | None:intergenic |
CCTCTATTCTCTTTGTCTTT+GGG | 0.245793 | 5.1:+4795500 | None:intergenic |
CCGCCATATAACATTATTTC+AGG | 0.247732 | 5.1:-4796070 | MS.gene20363:CDS |
CTCACTCCAATGTTGCTTCT+TGG | 0.248172 | 5.1:-4797642 | MS.gene20363:CDS |
AGTTGCTCAGCTGGAAATTT+TGG | 0.249923 | 5.1:-4796730 | MS.gene20363:CDS |
CTTAACATCAACGTTCTTCA+TGG | 0.254863 | 5.1:+4796483 | None:intergenic |
GGGCCTTCCAGCGGCCGTGC+TGG | 0.266267 | 5.1:+4797008 | None:intergenic |
CTAGAGCCTTTGCTTCTTCT+GGG | 0.278482 | 5.1:+4797361 | None:intergenic |
TGATCCAGGTTCTGATGTTC+AGG | 0.285228 | 5.1:-4796344 | MS.gene20363:CDS |
AAGGGGTGGAGGGTCCATTA+AGG | 0.291400 | 5.1:+4796812 | None:intergenic |
TGAGTTTATATAATCTTTGA+TGG | 0.297149 | 5.1:+4796279 | None:intergenic |
CTCTTTGTCTTTGGGTGTAA+TGG | 0.300037 | 5.1:+4795508 | None:intergenic |
TCTTCAATCTAAGGAGAGTT+TGG | 0.310882 | 5.1:-4797493 | MS.gene20363:CDS |
CGAATCCATTCATGACGTTT+TGG | 0.310891 | 5.1:+4797397 | None:intergenic |
ACTCACACACCAAGCTTCTT+GGG | 0.311370 | 5.1:-4797282 | MS.gene20363:CDS |
ATGTCTGGTTTCAGAATTCC+TGG | 0.311991 | 5.1:+4796151 | None:intergenic |
AACTCACACACCAAGCTTCT+TGG | 0.313947 | 5.1:-4797283 | MS.gene20363:CDS |
CATGAAGAACGTTGATGTTA+AGG | 0.314329 | 5.1:-4796482 | MS.gene20363:CDS |
TCAACGTTCTTCATGGAAAT+AGG | 0.324824 | 5.1:+4796490 | None:intergenic |
TAGATTGCCAAATGTGCTTC+TGG | 0.329353 | 5.1:+4796931 | None:intergenic |
TGCAACAGAGTCGAGGATTA+TGG | 0.343350 | 5.1:-4797257 | MS.gene20363:CDS |
ATTCCTGGGCTTTCTTGGCT+TGG | 0.349261 | 5.1:+4796166 | None:intergenic |
AAAGCCATCTCTTCAATCTA+AGG | 0.351475 | 5.1:-4797502 | MS.gene20363:CDS |
ATTCTGAAACCAGACATAAT+TGG | 0.361585 | 5.1:-4796145 | MS.gene20363:CDS |
GATTTATTTGCCACTGGTGC+TGG | 0.361920 | 5.1:-4795887 | MS.gene20363:CDS |
CATGGCACCAGAAGCACATT+TGG | 0.372753 | 5.1:-4796938 | MS.gene20363:CDS |
GTACCTGAAATAATGTTATA+TGG | 0.374557 | 5.1:+4796067 | None:intergenic |
TGCATTTAGTGCAAATCAAA+AGG | 0.376754 | 5.1:-4796764 | MS.gene20363:CDS |
TGCCTTCTCCGCCTGCGAAA+TGG | 0.378183 | 5.1:-4797146 | MS.gene20363:CDS |
TAATTTAAACCACACAAATA+AGG | 0.380966 | 5.1:+4795797 | None:intergenic |
ATGAAGAACGTTGATGTTAA+GGG | 0.383158 | 5.1:-4796481 | MS.gene20363:CDS |
CTCATGAATGGTAAACTTCA+AGG | 0.387470 | 5.1:-4796370 | MS.gene20363:CDS |
CCATCGATTTCGATTCGGTT+GGG | 0.390210 | 5.1:-4795689 | MS.gene20363:CDS |
AAGTTGGACATTTGCTTAGC+AGG | 0.390762 | 5.1:+4797610 | None:intergenic |
AATTATGACAACTGCTTATG+AGG | 0.393448 | 5.1:-4795957 | MS.gene20363:CDS |
TTAGACGTTGTAATATAATC+AGG | 0.395652 | 5.1:+4796706 | None:intergenic |
TTCTTCTGGGGTCAATTTCA+CGG | 0.399692 | 5.1:+4797374 | None:intergenic |
GCTTATGAGGTTAATCTTCA+AGG | 0.405892 | 5.1:-4795944 | MS.gene20363:CDS |
ATTTGTAACAAGAAGATCAT+TGG | 0.406451 | 5.1:-4797093 | MS.gene20363:CDS |
TGGTATTTATTTGCTGAAGT+TGG | 0.422856 | 5.1:+4797594 | None:intergenic |
TGTCGAGATTGATGTTCCTT+TGG | 0.422893 | 5.1:-4795603 | MS.gene20363:CDS |
ACTCCAGGTCCAATTATGTC+TGG | 0.423015 | 5.1:+4796136 | None:intergenic |
AGTGCTAATGGTACTGCAAT+AGG | 0.426292 | 5.1:-4796961 | MS.gene20363:CDS |
CAATAGCTAAACTTAGCAAT+GGG | 0.426944 | 5.1:-4796627 | MS.gene20363:CDS |
GTGCAAGGTGCTAATGTCTA+TGG | 0.428109 | 5.1:-4796985 | MS.gene20363:CDS |
AGGTGATAACAAAATTTCTC+AGG | 0.428850 | 5.1:-4795480 | MS.gene20363:CDS |
TCATACCAAAACGTCATGAA+TGG | 0.429593 | 5.1:-4797402 | MS.gene20363:CDS |
CCTGGATCGTTTGCTTTCGA+AGG | 0.435626 | 5.1:+4795854 | None:intergenic |
GCAATTACATCTTCAAAGAA+AGG | 0.436124 | 5.1:+4796793 | None:intergenic |
CATCGATTTCGATTCGGTTG+GGG | 0.438007 | 5.1:-4795688 | MS.gene20363:CDS |
TCCCTTCCATATGATGATAA+TGG | 0.440303 | 5.1:-4797048 | MS.gene20363:CDS |
AATTATACTGATAGACAAGT+TGG | 0.443269 | 5.1:-4795779 | MS.gene20363:CDS |
AAAATTCTAATCTCGGTAAA+GGG | 0.443949 | 5.1:-4797233 | MS.gene20363:CDS |
AGTGTTGATGCAAAGTCTTT+TGG | 0.446736 | 5.1:+4796574 | None:intergenic |
AGCAGCATGGCATGCATCAT+TGG | 0.455904 | 5.1:-4796104 | MS.gene20363:CDS |
TCAGTGAATGTTATCTGAGC+AGG | 0.456324 | 5.1:+4795560 | None:intergenic |
AATGTCTATGGCAGTGCTAA+TGG | 0.456995 | 5.1:-4796973 | MS.gene20363:CDS |
TCAATATCATATACAAGTCC+TGG | 0.458352 | 5.1:+4795836 | None:intergenic |
AGGGATCATAATTGGAATCC+TGG | 0.459598 | 5.1:-4797214 | MS.gene20363:CDS |
TTTCTCAGGGATCTATTAAG+TGG | 0.462165 | 5.1:-4795466 | MS.gene20363:CDS |
ATAGCAGTGGGAGACCAATC+TGG | 0.464324 | 5.1:+4795989 | None:intergenic |
CCATGACCATTATCATCATA+TGG | 0.465367 | 5.1:+4797042 | None:intergenic |
CTAAGGAGAGTTTGGATGGC+TGG | 0.468284 | 5.1:-4797485 | MS.gene20363:CDS |
TTGAATAAAATTGTGGCCAT+TGG | 0.470772 | 5.1:+4796247 | None:intergenic |
ACTAGAACATTGACGAATGT+TGG | 0.473220 | 5.1:-4795647 | MS.gene20363:CDS |
TTCCATTTCGCAGGCGGAGA+AGG | 0.473870 | 5.1:+4797144 | None:intergenic |
CTCTCCTTAGATTGAAGAGA+TGG | 0.475235 | 5.1:+4797498 | None:intergenic |
CAATTACATCTTCAAAGAAA+GGG | 0.481376 | 5.1:+4796794 | None:intergenic |
GATGAAAGTGCAGCATTAGC+AGG | 0.483030 | 5.1:-4796880 | MS.gene20363:CDS |
AGGGGTGGAGGGTCCATTAA+GGG | 0.483877 | 5.1:+4796813 | None:intergenic |
CAGTGGCCGTTCCATTTCGC+AGG | 0.486684 | 5.1:+4797135 | None:intergenic |
CCAGCTGATTTATTTGCCAC+TGG | 0.487913 | 5.1:-4795893 | MS.gene20363:CDS |
ATTATCCATCGATTTCGATT+CGG | 0.489271 | 5.1:-4795694 | MS.gene20363:CDS |
CTGGATCGTTTGCTTTCGAA+GGG | 0.490523 | 5.1:+4795855 | None:intergenic |
GGATAATTAAGTTGTGCCTC+TGG | 0.491400 | 5.1:+4795710 | None:intergenic |
CACACAGCCAGCACGGCCGC+TGG | 0.491935 | 5.1:-4797015 | MS.gene20363:CDS |
ATGAGAAAATCATGCGTTGC+TGG | 0.495424 | 5.1:+4797421 | None:intergenic |
TTTACCATTCATGAGGATCA+TGG | 0.499927 | 5.1:+4796378 | None:intergenic |
CAGAAAAGGAAGGATGGGAG+AGG | 0.502238 | 5.1:+4797178 | None:intergenic |
CATGGAAATAGGACCACAAA+AGG | 0.502542 | 5.1:+4796501 | None:intergenic |
AGGCATTCCCTCGTCAGAAA+AGG | 0.503857 | 5.1:+4797164 | None:intergenic |
ATCTTCAAAGAAAGGGGTGG+AGG | 0.509300 | 5.1:+4796801 | None:intergenic |
CCATATGATGATAATGGTCA+TGG | 0.510595 | 5.1:-4797042 | MS.gene20363:CDS |
GCCGCTGGAAGGCCCGTGCA+AGG | 0.511491 | 5.1:-4797000 | MS.gene20363:CDS |
ACTTTCATCACAACGACCAC+TGG | 0.513443 | 5.1:+4796894 | None:intergenic |
AAATTAGCAGCTGCAAATGA+AGG | 0.513685 | 5.1:-4797570 | MS.gene20363:CDS |
AGTTCCTTTGAATAAAATTG+TGG | 0.515236 | 5.1:+4796240 | None:intergenic |
GACCATTATCATCATATGGA+AGG | 0.518281 | 5.1:+4797046 | None:intergenic |
TGTCTGGTTTCAGAATTCCT+GGG | 0.519701 | 5.1:+4796152 | None:intergenic |
CCTTCGAAAGCAAACGATCC+AGG | 0.522836 | 5.1:-4795854 | MS.gene20363:CDS |
GAGTAACTTACATGTGTAGC+AGG | 0.522925 | 5.1:+4796313 | None:intergenic |
ATGAAAAGTAAGCTACTTGA+GGG | 0.525431 | 5.1:+4796197 | None:intergenic |
CAGCCAGCACGGCCGCTGGA+AGG | 0.528367 | 5.1:-4797011 | MS.gene20363:CDS |
GATCCAGGTTCTGATGTTCA+GGG | 0.529907 | 5.1:-4796343 | MS.gene20363:CDS |
CCCAAAGACAAAGAGAATAG+AGG | 0.530769 | 5.1:-4795500 | MS.gene20363:CDS |
GCAATAGCTAAACTTAGCAA+TGG | 0.531778 | 5.1:-4796628 | MS.gene20363:CDS |
CTCTGGTATGCTCTTTACCT+CGG | 0.531790 | 5.1:+4795727 | None:intergenic |
CAATCTAAGGAGAGTTTGGA+TGG | 0.534874 | 5.1:-4797489 | MS.gene20363:CDS |
TGTTGCAACCCCAAGAAGCT+TGG | 0.535770 | 5.1:+4797273 | None:intergenic |
AGAGGGATATTCCTGTGTCC+AGG | 0.538307 | 5.1:+4797196 | None:intergenic |
ATGAAACCAAGAAGCAACAT+TGG | 0.539714 | 5.1:+4797636 | None:intergenic |
TGAGGTTAATCTTCAAGGAA+AGG | 0.541754 | 5.1:-4795939 | MS.gene20363:CDS |
TCCATCGATTTCGATTCGGT+TGG | 0.544467 | 5.1:-4795690 | MS.gene20363:CDS |
ATAGACATTAGCACCTTGCA+CGG | 0.544705 | 5.1:+4796987 | None:intergenic |
AAGTGCAGCATTAGCAGGAA+TGG | 0.545404 | 5.1:-4796875 | MS.gene20363:CDS |
CCTCGTCAGAAAAGGAAGGA+TGG | 0.547531 | 5.1:+4797172 | None:intergenic |
ACACATGTAAGTTACTCTGC+TGG | 0.549190 | 5.1:-4796307 | MS.gene20363:CDS |
CCAGTGGCAAATAAATCAGC+TGG | 0.549379 | 5.1:+4795893 | None:intergenic |
ATTGCTGATTTGATAGCAGT+GGG | 0.551526 | 5.1:+4795977 | None:intergenic |
GGACCAAGCCAAGAAAGCCC+AGG | 0.552124 | 5.1:-4796169 | MS.gene20363:CDS |
CTCGTCAGAAAAGGAAGGAT+GGG | 0.555705 | 5.1:+4797173 | None:intergenic |
TTCTCAGGGATCTATTAAGT+GGG | 0.557114 | 5.1:-4795465 | MS.gene20363:CDS |
AGCAAAGGCTCTAGAAGAGA+AGG | 0.561267 | 5.1:-4797352 | MS.gene20363:CDS |
GCATTTAGTGCAAATCAAAA+GGG | 0.562724 | 5.1:-4796763 | MS.gene20363:CDS |
TGGAAGGGATGAATTTACTA+AGG | 0.563042 | 5.1:+4797062 | None:intergenic |
TAGAGCCTTTGCTTCTTCTG+GGG | 0.563775 | 5.1:+4797362 | None:intergenic |
ACCTTGCACGGGCCTTCCAG+CGG | 0.564302 | 5.1:+4796999 | None:intergenic |
GAACGTTGATGTTAAGGGAA+AGG | 0.564400 | 5.1:-4796476 | MS.gene20363:CDS |
GATTATGTTCCTTATTTGTG+TGG | 0.564467 | 5.1:-4795806 | MS.gene20363:CDS |
GATGAAAAGTAAGCTACTTG+AGG | 0.564885 | 5.1:+4796196 | None:intergenic |
ACATTGTAAGTCATGTTGAC+AGG | 0.565381 | 5.1:+4795623 | None:intergenic |
AACGGCCACTGTGAATTCAC+AGG | 0.565850 | 5.1:-4797123 | MS.gene20363:CDS |
GCTGCTAGAATGTTCACTCC+AGG | 0.567644 | 5.1:+4796121 | None:intergenic |
CTCACACACCAAGCTTCTTG+GGG | 0.569819 | 5.1:-4797281 | MS.gene20363:CDS |
CTTGAAGTTTACCATTCATG+AGG | 0.579948 | 5.1:+4796371 | None:intergenic |
AATTGCTGATTTGATAGCAG+TGG | 0.580901 | 5.1:+4795976 | None:intergenic |
GGTGATAACAAAATTTCTCA+GGG | 0.581829 | 5.1:-4795479 | MS.gene20363:CDS |
ACCATTATCATCATATGGAA+GGG | 0.582756 | 5.1:+4797047 | None:intergenic |
TCTTCAAAGAAAGGGGTGGA+GGG | 0.584147 | 5.1:+4796802 | None:intergenic |
CTGTTGCCACTTGTGTATGC+AGG | 0.587692 | 5.1:-4796553 | MS.gene20363:CDS |
AAACTCAACTTCAACACCAA+TGG | 0.587710 | 5.1:-4796263 | MS.gene20363:CDS |
ACTGTGAATTCACAGGGGAA+AGG | 0.589203 | 5.1:-4797116 | MS.gene20363:CDS |
TGGCCGTTCCATTTCGCAGG+CGG | 0.593846 | 5.1:+4797138 | None:intergenic |
TTTGAAGATGTAATTGCACT+TGG | 0.595521 | 5.1:-4796787 | MS.gene20363:CDS |
AATAGGACCACAAAAGGCAA+TGG | 0.596454 | 5.1:+4796507 | None:intergenic |
CCCAACCGAATCGAAATCGA+TGG | 0.598604 | 5.1:+4795689 | None:intergenic |
TAAGCTACTTGAGGGGCGAG+TGG | 0.600122 | 5.1:+4796205 | None:intergenic |
ACGCCCTGAACATCAGAACC+TGG | 0.602996 | 5.1:+4796340 | None:intergenic |
TTGGGGTTGCAACAGAGTCG+AGG | 0.603368 | 5.1:-4797264 | MS.gene20363:CDS |
AGAAAAGGAAGGATGGGAGA+GGG | 0.610457 | 5.1:+4797179 | None:intergenic |
GGCTCTAGAAGAGAAGGAGG+AGG | 0.610956 | 5.1:-4797346 | MS.gene20363:CDS |
GCACCAACAGTTAGAATCCA+CGG | 0.611936 | 5.1:+4796676 | None:intergenic |
TGGAACTCACACAGCCAGCA+CGG | 0.614452 | 5.1:-4797022 | MS.gene20363:CDS |
GCAGAACCTGCATACACAAG+TGG | 0.615610 | 5.1:+4796547 | None:intergenic |
ATTGACCCCAGAAGAAGCAA+AGG | 0.616646 | 5.1:-4797367 | MS.gene20363:CDS |
TACATCTTCAAAGAAAGGGG+TGG | 0.616672 | 5.1:+4796798 | None:intergenic |
GTTCACATGTCCAGCACCAG+TGG | 0.617224 | 5.1:+4795877 | None:intergenic |
GACAGATATAGGTATTCTAA+CGG | 0.618937 | 5.1:+4795427 | None:intergenic |
TCTCCGCCTGCGAAATGGAA+CGG | 0.619437 | 5.1:-4797141 | MS.gene20363:CDS |
AAAGGCTCTAGAAGAGAAGG+AGG | 0.622215 | 5.1:-4797349 | MS.gene20363:CDS |
TAGACATTAGCACCTTGCAC+GGG | 0.627751 | 5.1:+4796988 | None:intergenic |
GAGTGAACATTCTAGCAGCA+TGG | 0.629667 | 5.1:-4796117 | MS.gene20363:CDS |
CAAGCAGTTAAAGACGCTGG+TGG | 0.630093 | 5.1:-4796406 | MS.gene20363:CDS |
GCTCAAGCAGTTAAAGACGC+TGG | 0.632815 | 5.1:-4796409 | MS.gene20363:CDS |
ATGTCTTGTCCTCATCTCAG+TGG | 0.632923 | 5.1:-4796040 | MS.gene20363:CDS |
ACGGCCACTGTGAATTCACA+GGG | 0.634794 | 5.1:-4797122 | MS.gene20363:CDS |
ATAGTGATATCAACTGCCAA+AGG | 0.636493 | 5.1:+4795587 | None:intergenic |
TAATGGTACTGCAATAGGCA+TGG | 0.638046 | 5.1:-4796956 | MS.gene20363:CDS |
ATAATTGGAATCCTGGACAC+AGG | 0.640358 | 5.1:-4797207 | MS.gene20363:CDS |
AAACCAGACATAATTGGACC+TGG | 0.641671 | 5.1:-4796139 | MS.gene20363:CDS |
GCTGCCATGATCCTCATGAA+TGG | 0.641925 | 5.1:-4796382 | MS.gene20363:CDS |
GCAGCAATTCCACTGAGATG+AGG | 0.644059 | 5.1:+4796031 | None:intergenic |
ACAAGAAGATCATTGGAGCA+AGG | 0.644785 | 5.1:-4797086 | MS.gene20363:CDS |
ATGGACGCTGCAGTTGAAGA+CGG | 0.649497 | 5.1:-4796856 | MS.gene20363:CDS |
ATTCCCTCGTCAGAAAAGGA+AGG | 0.650060 | 5.1:+4797168 | None:intergenic |
GAGATGAGGACAAGACATTG+AGG | 0.654510 | 5.1:+4796045 | None:intergenic |
TACAAAGTATGCGCAACCAG+TGG | 0.656203 | 5.1:-4796910 | MS.gene20363:CDS |
TGTGAGTTGTATGTAATGAG+AGG | 0.657109 | 5.1:+4797298 | None:intergenic |
AATTACATCTTCAAAGAAAG+GGG | 0.660792 | 5.1:+4796795 | None:intergenic |
GCGCCGTGGATTCTAACTGT+TGG | 0.673712 | 5.1:-4796679 | MS.gene20363:CDS |
CCTGAAATAATGTTATATGG+CGG | 0.691602 | 5.1:+4796070 | None:intergenic |
CAACGTCTAATGAAGCGCCG+TGG | 0.694575 | 5.1:-4796693 | MS.gene20363:CDS |
AATAGCTAAACTTAGCAATG+GGG | 0.694754 | 5.1:-4796626 | MS.gene20363:CDS |
CGAGGTAAAGAGCATACCAG+AGG | 0.705808 | 5.1:-4795726 | MS.gene20363:CDS |
TGAAAAGTAAGCTACTTGAG+GGG | 0.748832 | 5.1:+4796198 | None:intergenic |
TTTCCCCTGTGAATTCACAG+TGG | 0.753630 | 5.1:+4797118 | None:intergenic |
ACATAAAGTGAAATGCTCCG+AGG | 0.760693 | 5.1:-4795744 | MS.gene20363:CDS |
CGGCCACTGTGAATTCACAG+GGG | 0.810723 | 5.1:-4797121 | MS.gene20363:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTTAAACCACACAAATA+AGG | + | chr5.1:4797269-4797288 | None:intergenic | 20.0% |
!! | TGAGTTTATATAATCTTTGA+TGG | + | chr5.1:4796787-4796806 | None:intergenic | 20.0% |
!! | TTATGGAAAAATTCTAATCT+CGG | - | chr5.1:4795823-4795842 | MS.gene20363:CDS | 20.0% |
! | AAAAATTCTAATCTCGGTAA+AGG | - | chr5.1:4795829-4795848 | MS.gene20363:CDS | 25.0% |
! | AAAATTCTAATCTCGGTAAA+GGG | - | chr5.1:4795830-4795849 | MS.gene20363:CDS | 25.0% |
! | AATTACATCTTCAAAGAAAG+GGG | + | chr5.1:4796271-4796290 | None:intergenic | 25.0% |
! | AATTATACTGATAGACAAGT+TGG | - | chr5.1:4797284-4797303 | MS.gene20363:CDS | 25.0% |
! | AGTTCCTTTGAATAAAATTG+TGG | + | chr5.1:4796826-4796845 | None:intergenic | 25.0% |
! | ATTTGTAACAAGAAGATCAT+TGG | - | chr5.1:4795970-4795989 | MS.gene20363:CDS | 25.0% |
! | CAATTACATCTTCAAAGAAA+GGG | + | chr5.1:4796272-4796291 | None:intergenic | 25.0% |
! | GTACCTGAAATAATGTTATA+TGG | + | chr5.1:4796999-4797018 | None:intergenic | 25.0% |
! | TTAGACGTTGTAATATAATC+AGG | + | chr5.1:4796360-4796379 | None:intergenic | 25.0% |
! | TTATTCAAAGGAACTGTTAT+TGG | - | chr5.1:4796831-4796850 | MS.gene20363:CDS | 25.0% |
!!! | TATTGCTTCTATTTTTCTGT+CGG | + | chr5.1:4796421-4796440 | None:intergenic | 25.0% |
AATAGCTAAACTTAGCAATG+GGG | - | chr5.1:4796437-4796456 | MS.gene20363:CDS | 30.0% | |
AATTATGACAACTGCTTATG+AGG | - | chr5.1:4797106-4797125 | MS.gene20363:CDS | 30.0% | |
ACCATTATCATCATATGGAA+GGG | + | chr5.1:4796019-4796038 | None:intergenic | 30.0% | |
AGCAATGGGGAAAAATATAT+TGG | - | chr5.1:4796450-4796469 | MS.gene20363:CDS | 30.0% | |
AGGTGATAACAAAATTTCTC+AGG | - | chr5.1:4797583-4797602 | MS.gene20363:CDS | 30.0% | |
ATGAAAAGTAAGCTACTTGA+GGG | + | chr5.1:4796869-4796888 | None:intergenic | 30.0% | |
ATGAAGAACGTTGATGTTAA+GGG | - | chr5.1:4796582-4796601 | MS.gene20363:CDS | 30.0% | |
CAATAGCTAAACTTAGCAAT+GGG | - | chr5.1:4796436-4796455 | MS.gene20363:CDS | 30.0% | |
CACACAAAAATGACAGATAT+AGG | + | chr5.1:4797650-4797669 | None:intergenic | 30.0% | |
CCTGAAATAATGTTATATGG+CGG | + | chr5.1:4796996-4797015 | None:intergenic | 30.0% | |
GAAGCAAAAAGTTACATACT+CGG | - | chr5.1:4797529-4797548 | MS.gene20363:CDS | 30.0% | |
GACAGATATAGGTATTCTAA+CGG | + | chr5.1:4797639-4797658 | None:intergenic | 30.0% | |
GCAATTACATCTTCAAAGAA+AGG | + | chr5.1:4796273-4796292 | None:intergenic | 30.0% | |
GCATTTAGTGCAAATCAAAA+GGG | - | chr5.1:4796300-4796319 | MS.gene20363:CDS | 30.0% | |
GGTGATAACAAAATTTCTCA+GGG | - | chr5.1:4797584-4797603 | MS.gene20363:CDS | 30.0% | |
TCAATATCATATACAAGTCC+TGG | + | chr5.1:4797230-4797249 | None:intergenic | 30.0% | |
TGCATTTAGTGCAAATCAAA+AGG | - | chr5.1:4796299-4796318 | MS.gene20363:CDS | 30.0% | |
TTGAATAAAATTGTGGCCAT+TGG | + | chr5.1:4796819-4796838 | None:intergenic | 30.0% | |
TTTGAAGATGTAATTGCACT+TGG | - | chr5.1:4796276-4796295 | MS.gene20363:CDS | 30.0% | |
! | ATGGCCACAATTTTATTCAA+AGG | - | chr5.1:4796819-4796838 | MS.gene20363:CDS | 30.0% |
! | GATTATGTTCCTTATTTGTG+TGG | - | chr5.1:4797257-4797276 | MS.gene20363:CDS | 30.0% |
! | TGGTATTTATTTGCTGAAGT+TGG | + | chr5.1:4795472-4795491 | None:intergenic | 30.0% |
!! | ATTATCCATCGATTTCGATT+CGG | - | chr5.1:4797369-4797388 | MS.gene20363:CDS | 30.0% |
!! | ATTCTGAAACCAGACATAAT+TGG | - | chr5.1:4796918-4796937 | MS.gene20363:CDS | 30.0% |
AAACTCAACTTCAACACCAA+TGG | - | chr5.1:4796800-4796819 | MS.gene20363:CDS | 35.0% | |
AAAGCCATCTCTTCAATCTA+AGG | - | chr5.1:4795561-4795580 | MS.gene20363:CDS | 35.0% | |
AAATTAGCAGCTGCAAATGA+AGG | - | chr5.1:4795493-4795512 | MS.gene20363:CDS | 35.0% | |
ACATTGTAAGTCATGTTGAC+AGG | + | chr5.1:4797443-4797462 | None:intergenic | 35.0% | |
ACCTCTATTCTCTTTGTCTT+TGG | + | chr5.1:4797567-4797586 | None:intergenic | 35.0% | |
ACTAGAACATTGACGAATGT+TGG | - | chr5.1:4797416-4797435 | MS.gene20363:CDS | 35.0% | |
ATAGTGATATCAACTGCCAA+AGG | + | chr5.1:4797479-4797498 | None:intergenic | 35.0% | |
ATGAAACCAAGAAGCAACAT+TGG | + | chr5.1:4795430-4795449 | None:intergenic | 35.0% | |
CATGAAGAACGTTGATGTTA+AGG | - | chr5.1:4796581-4796600 | MS.gene20363:CDS | 35.0% | |
CCATGACCATTATCATCATA+TGG | + | chr5.1:4796024-4796043 | None:intergenic | 35.0% | |
CCGCCATATAACATTATTTC+AGG | - | chr5.1:4796993-4797012 | MS.gene20363:CDS | 35.0% | |
CCTCTATTCTCTTTGTCTTT+GGG | + | chr5.1:4797566-4797585 | None:intergenic | 35.0% | |
CTCATGAATGGTAAACTTCA+AGG | - | chr5.1:4796693-4796712 | MS.gene20363:CDS | 35.0% | |
CTTAACATCAACGTTCTTCA+TGG | + | chr5.1:4796583-4796602 | None:intergenic | 35.0% | |
CTTGAAGTTTACCATTCATG+AGG | + | chr5.1:4796695-4796714 | None:intergenic | 35.0% | |
GACCATTATCATCATATGGA+AGG | + | chr5.1:4796020-4796039 | None:intergenic | 35.0% | |
GATGAAAAGTAAGCTACTTG+AGG | + | chr5.1:4796870-4796889 | None:intergenic | 35.0% | |
GCAATAGCTAAACTTAGCAA+TGG | - | chr5.1:4796435-4796454 | MS.gene20363:CDS | 35.0% | |
GCTTATGAGGTTAATCTTCA+AGG | - | chr5.1:4797119-4797138 | MS.gene20363:CDS | 35.0% | |
GTACTTTCAATCTCCCTTAA+TGG | - | chr5.1:4796237-4796256 | MS.gene20363:CDS | 35.0% | |
TCAACGTTCTTCATGGAAAT+AGG | + | chr5.1:4796576-4796595 | None:intergenic | 35.0% | |
TCATACCAAAACGTCATGAA+TGG | - | chr5.1:4795661-4795680 | MS.gene20363:CDS | 35.0% | |
TCCCTTCCATATGATGATAA+TGG | - | chr5.1:4796015-4796034 | MS.gene20363:CDS | 35.0% | |
TCTTCAATCTAAGGAGAGTT+TGG | - | chr5.1:4795570-4795589 | MS.gene20363:CDS | 35.0% | |
TGAAAAACTCTCATCCAGAT+TGG | - | chr5.1:4797060-4797079 | MS.gene20363:CDS | 35.0% | |
TGAAAAGTAAGCTACTTGAG+GGG | + | chr5.1:4796868-4796887 | None:intergenic | 35.0% | |
TGAGGTTAATCTTCAAGGAA+AGG | - | chr5.1:4797124-4797143 | MS.gene20363:CDS | 35.0% | |
TGGAAGGGATGAATTTACTA+AGG | + | chr5.1:4796004-4796023 | None:intergenic | 35.0% | |
TGTGAGTTGTATGTAATGAG+AGG | + | chr5.1:4795768-4795787 | None:intergenic | 35.0% | |
TTCTCAGGGATCTATTAAGT+GGG | - | chr5.1:4797598-4797617 | MS.gene20363:CDS | 35.0% | |
TTTACCATTCATGAGGATCA+TGG | + | chr5.1:4796688-4796707 | None:intergenic | 35.0% | |
TTTCTCAGGGATCTATTAAG+TGG | - | chr5.1:4797597-4797616 | MS.gene20363:CDS | 35.0% | |
! | AATCAGCTGGTTTAAGTCTT+TGG | + | chr5.1:4797160-4797179 | None:intergenic | 35.0% |
! | CATTTGCAGCTGCTAATTTT+TGG | + | chr5.1:4795492-4795511 | None:intergenic | 35.0% |
! | GATAATTCCATTGCCTTTTG+TGG | - | chr5.1:4796549-4796568 | MS.gene20363:CDS | 35.0% |
! | TGTAATGAGAGGATCTTTTC+TGG | + | chr5.1:4795757-4795776 | None:intergenic | 35.0% |
!! | AAACTTCAAGGTTTTGATCC+AGG | - | chr5.1:4796705-4796724 | MS.gene20363:CDS | 35.0% |
!! | AATTGCTGATTTGATAGCAG+TGG | + | chr5.1:4797090-4797109 | None:intergenic | 35.0% |
!! | ATTGCTGATTTGATAGCAGT+GGG | + | chr5.1:4797089-4797108 | None:intergenic | 35.0% |
!! | CCATATGATGATAATGGTCA+TGG | - | chr5.1:4796021-4796040 | MS.gene20363:CDS | 35.0% |
!! | GTAGCTTACTTTTCATCAAG+AGG | - | chr5.1:4796873-4796892 | MS.gene20363:CDS | 35.0% |
!!! | AGTGTTGATGCAAAGTCTTT+TGG | + | chr5.1:4796492-4796511 | None:intergenic | 35.0% |
AAACCAGACATAATTGGACC+TGG | - | chr5.1:4796924-4796943 | MS.gene20363:CDS | 40.0% | |
AAGTTGGACATTTGCTTAGC+AGG | + | chr5.1:4795456-4795475 | None:intergenic | 40.0% | |
AATAGGACCACAAAAGGCAA+TGG | + | chr5.1:4796559-4796578 | None:intergenic | 40.0% | |
AATGTCTATGGCAGTGCTAA+TGG | - | chr5.1:4796090-4796109 | MS.gene20363:CDS | 40.0% | |
ACAAGAAGATCATTGGAGCA+AGG | - | chr5.1:4795977-4795996 | MS.gene20363:CDS | 40.0% | |
ACACATGTAAGTTACTCTGC+TGG | - | chr5.1:4796756-4796775 | MS.gene20363:CDS | 40.0% | |
ACATAAAGTGAAATGCTCCG+AGG | - | chr5.1:4797319-4797338 | MS.gene20363:CDS | 40.0% | |
AGGGATCATAATTGGAATCC+TGG | - | chr5.1:4795849-4795868 | MS.gene20363:CDS | 40.0% | |
AGTGCTAATGGTACTGCAAT+AGG | - | chr5.1:4796102-4796121 | MS.gene20363:CDS | 40.0% | |
ATAATTGGAATCCTGGACAC+AGG | - | chr5.1:4795856-4795875 | MS.gene20363:CDS | 40.0% | |
ATAGACATTAGCACCTTGCA+CGG | + | chr5.1:4796079-4796098 | None:intergenic | 40.0% | |
ATGAGAAAATCATGCGTTGC+TGG | + | chr5.1:4795645-4795664 | None:intergenic | 40.0% | |
CAATCTAAGGAGAGTTTGGA+TGG | - | chr5.1:4795574-4795593 | MS.gene20363:CDS | 40.0% | |
CATGGAAATAGGACCACAAA+AGG | + | chr5.1:4796565-4796584 | None:intergenic | 40.0% | |
CCCAAAGACAAAGAGAATAG+AGG | - | chr5.1:4797563-4797582 | MS.gene20363:CDS | 40.0% | |
CTCGGTAAAGGGATCATAAT+TGG | - | chr5.1:4795841-4795860 | MS.gene20363:CDS | 40.0% | |
CTCTCCTTAGATTGAAGAGA+TGG | + | chr5.1:4795568-4795587 | None:intergenic | 40.0% | |
CTCTTTGTCTTTGGGTGTAA+TGG | + | chr5.1:4797558-4797577 | None:intergenic | 40.0% | |
GAACGTTGATGTTAAGGGAA+AGG | - | chr5.1:4796587-4796606 | MS.gene20363:CDS | 40.0% | |
GAGTAACTTACATGTGTAGC+AGG | + | chr5.1:4796753-4796772 | None:intergenic | 40.0% | |
TAATGGTACTGCAATAGGCA+TGG | - | chr5.1:4796107-4796126 | MS.gene20363:CDS | 40.0% | |
TACATCTTCAAAGAAAGGGG+TGG | + | chr5.1:4796268-4796287 | None:intergenic | 40.0% | |
TAGATTGCCAAATGTGCTTC+TGG | + | chr5.1:4796135-4796154 | None:intergenic | 40.0% | |
TCAGTGAATGTTATCTGAGC+AGG | + | chr5.1:4797506-4797525 | None:intergenic | 40.0% | |
TGTCGAGATTGATGTTCCTT+TGG | - | chr5.1:4797460-4797479 | MS.gene20363:CDS | 40.0% | |
! | AGTTGCTCAGCTGGAAATTT+TGG | - | chr5.1:4796333-4796352 | MS.gene20363:CDS | 40.0% |
! | ATGTCTGGTTTCAGAATTCC+TGG | + | chr5.1:4796915-4796934 | None:intergenic | 40.0% |
! | ATTTTCGTTAGTTGCTCAGC+TGG | - | chr5.1:4796324-4796343 | MS.gene20363:CDS | 40.0% |
! | CGAATCCATTCATGACGTTT+TGG | + | chr5.1:4795669-4795688 | None:intergenic | 40.0% |
! | GGATAATTAAGTTGTGCCTC+TGG | + | chr5.1:4797356-4797375 | None:intergenic | 40.0% |
! | GGATCTATTAAGTGGGTTTC+TGG | - | chr5.1:4797605-4797624 | MS.gene20363:CDS | 40.0% |
! | TGAGTTTTTGTAGTAGCTGC+TGG | + | chr5.1:4795619-4795638 | None:intergenic | 40.0% |
! | TGTCTGGTTTCAGAATTCCT+GGG | + | chr5.1:4796914-4796933 | None:intergenic | 40.0% |
!! | TTCTTCTGGGGTCAATTTCA+CGG | + | chr5.1:4795692-4795711 | None:intergenic | 40.0% |
!!! | AAGGTAGTTTTGTGTGAGGA+AGG | - | chr5.1:4796606-4796625 | MS.gene20363:CDS | 40.0% |
AACTCACACACCAAGCTTCT+TGG | - | chr5.1:4795780-4795799 | MS.gene20363:CDS | 45.0% | |
AAGTGCAGCATTAGCAGGAA+TGG | - | chr5.1:4796188-4796207 | MS.gene20363:CDS | 45.0% | |
ACTCACACACCAAGCTTCTT+GGG | - | chr5.1:4795781-4795800 | MS.gene20363:CDS | 45.0% | |
ACTCCAGGTCCAATTATGTC+TGG | + | chr5.1:4796930-4796949 | None:intergenic | 45.0% | |
ACTGTGAATTCACAGGGGAA+AGG | - | chr5.1:4795947-4795966 | MS.gene20363:CDS | 45.0% | |
ACTTTCATCACAACGACCAC+TGG | + | chr5.1:4796172-4796191 | None:intergenic | 45.0% | |
AGAAAAGGAAGGATGGGAGA+GGG | + | chr5.1:4795887-4795906 | None:intergenic | 45.0% | |
ATCTTCAAAGAAAGGGGTGG+AGG | + | chr5.1:4796265-4796284 | None:intergenic | 45.0% | |
ATGTCTTGTCCTCATCTCAG+TGG | - | chr5.1:4797023-4797042 | MS.gene20363:CDS | 45.0% | |
ATTCCCTCGTCAGAAAAGGA+AGG | + | chr5.1:4795898-4795917 | None:intergenic | 45.0% | |
ATTGACCCCAGAAGAAGCAA+AGG | - | chr5.1:4795696-4795715 | MS.gene20363:CDS | 45.0% | |
CCAGTGGCAAATAAATCAGC+TGG | + | chr5.1:4797173-4797192 | None:intergenic | 45.0% | |
CTAGAGCCTTTGCTTCTTCT+GGG | + | chr5.1:4795705-4795724 | None:intergenic | 45.0% | |
CTCGTCAGAAAAGGAAGGAT+GGG | + | chr5.1:4795893-4795912 | None:intergenic | 45.0% | |
CTCTGGTATGCTCTTTACCT+CGG | + | chr5.1:4797339-4797358 | None:intergenic | 45.0% | |
CTGGATCGTTTGCTTTCGAA+GGG | + | chr5.1:4797211-4797230 | None:intergenic | 45.0% | |
GAGATGAGGACAAGACATTG+AGG | + | chr5.1:4797021-4797040 | None:intergenic | 45.0% | |
GAGTGAACATTCTAGCAGCA+TGG | - | chr5.1:4796946-4796965 | MS.gene20363:CDS | 45.0% | |
GATTTATTTGCCACTGGTGC+TGG | - | chr5.1:4797176-4797195 | MS.gene20363:CDS | 45.0% | |
GCACCAACAGTTAGAATCCA+CGG | + | chr5.1:4796390-4796409 | None:intergenic | 45.0% | |
TACAAAGTATGCGCAACCAG+TGG | - | chr5.1:4796153-4796172 | MS.gene20363:CDS | 45.0% | |
TAGACATTAGCACCTTGCAC+GGG | + | chr5.1:4796078-4796097 | None:intergenic | 45.0% | |
TAGAGCCTTTGCTTCTTCTG+GGG | + | chr5.1:4795704-4795723 | None:intergenic | 45.0% | |
TCAGAATTCCTGGGCTTTCT+TGG | + | chr5.1:4796905-4796924 | None:intergenic | 45.0% | |
TCTTCAAAGAAAGGGGTGGA+GGG | + | chr5.1:4796264-4796283 | None:intergenic | 45.0% | |
TGCAACAGAGTCGAGGATTA+TGG | - | chr5.1:4795806-4795825 | MS.gene20363:CDS | 45.0% | |
TTTCCCCTGTGAATTCACAG+TGG | + | chr5.1:4795948-4795967 | None:intergenic | 45.0% | |
! | CATCCTTCCTTTTCTGACGA+GGG | - | chr5.1:4795892-4795911 | MS.gene20363:CDS | 45.0% |
! | CCAGCTGATTTATTTGCCAC+TGG | - | chr5.1:4797170-4797189 | MS.gene20363:CDS | 45.0% |
! | CTCACTCCAATGTTGCTTCT+TGG | - | chr5.1:4795421-4795440 | MS.gene20363:CDS | 45.0% |
! | GATCCAGGTTCTGATGTTCA+GGG | - | chr5.1:4796720-4796739 | MS.gene20363:CDS | 45.0% |
! | GATGAAAGTGCAGCATTAGC+AGG | - | chr5.1:4796183-4796202 | MS.gene20363:CDS | 45.0% |
! | GTGCAAGGTGCTAATGTCTA+TGG | - | chr5.1:4796078-4796097 | MS.gene20363:CDS | 45.0% |
! | TCTAGAGCCTTTGCTTCTTC+TGG | + | chr5.1:4795706-4795725 | None:intergenic | 45.0% |
! | TGATCCAGGTTCTGATGTTC+AGG | - | chr5.1:4796719-4796738 | MS.gene20363:CDS | 45.0% |
!! | AAAGGCTCTAGAAGAGAAGG+AGG | - | chr5.1:4795714-4795733 | MS.gene20363:CDS | 45.0% |
!! | AGCAAAGGCTCTAGAAGAGA+AGG | - | chr5.1:4795711-4795730 | MS.gene20363:CDS | 45.0% |
!! | CATCGATTTCGATTCGGTTG+GGG | - | chr5.1:4797375-4797394 | MS.gene20363:CDS | 45.0% |
!! | CCATCGATTTCGATTCGGTT+GGG | - | chr5.1:4797374-4797393 | MS.gene20363:CDS | 45.0% |
!! | TCCATCGATTTCGATTCGGT+TGG | - | chr5.1:4797373-4797392 | MS.gene20363:CDS | 45.0% |
!!! | GGGAAAGGTAGTTTTGTGTG+AGG | - | chr5.1:4796602-4796621 | MS.gene20363:CDS | 45.0% |
!!! | GTAGTTTTGTGTGAGGAAGG+TGG | - | chr5.1:4796609-4796628 | MS.gene20363:CDS | 45.0% |
AACGGCCACTGTGAATTCAC+AGG | - | chr5.1:4795940-4795959 | MS.gene20363:CDS | 50.0% | |
ACGGCCACTGTGAATTCACA+GGG | - | chr5.1:4795941-4795960 | MS.gene20363:CDS | 50.0% | |
AGAGGGATATTCCTGTGTCC+AGG | + | chr5.1:4795870-4795889 | None:intergenic | 50.0% | |
AGCAGCATGGCATGCATCAT+TGG | - | chr5.1:4796959-4796978 | MS.gene20363:CDS | 50.0% | |
AGGCATTCCCTCGTCAGAAA+AGG | + | chr5.1:4795902-4795921 | None:intergenic | 50.0% | |
ATAGCAGTGGGAGACCAATC+TGG | + | chr5.1:4797077-4797096 | None:intergenic | 50.0% | |
ATGGACGCTGCAGTTGAAGA+CGG | - | chr5.1:4796207-4796226 | MS.gene20363:CDS | 50.0% | |
ATTCCTGGGCTTTCTTGGCT+TGG | + | chr5.1:4796900-4796919 | None:intergenic | 50.0% | |
CAAGCAGTTAAAGACGCTGG+TGG | - | chr5.1:4796657-4796676 | MS.gene20363:CDS | 50.0% | |
CAGAAAAGGAAGGATGGGAG+AGG | + | chr5.1:4795888-4795907 | None:intergenic | 50.0% | |
CCCAACCGAATCGAAATCGA+TGG | + | chr5.1:4797377-4797396 | None:intergenic | 50.0% | |
CCTCGTCAGAAAAGGAAGGA+TGG | + | chr5.1:4795894-4795913 | None:intergenic | 50.0% | |
CCTGGATCGTTTGCTTTCGA+AGG | + | chr5.1:4797212-4797231 | None:intergenic | 50.0% | |
CCTTCGAAAGCAAACGATCC+AGG | - | chr5.1:4797209-4797228 | MS.gene20363:CDS | 50.0% | |
CTAAGGAGAGTTTGGATGGC+TGG | - | chr5.1:4795578-4795597 | MS.gene20363:CDS | 50.0% | |
CTCACACACCAAGCTTCTTG+GGG | - | chr5.1:4795782-4795801 | MS.gene20363:CDS | 50.0% | |
GCAGAACCTGCATACACAAG+TGG | + | chr5.1:4796519-4796538 | None:intergenic | 50.0% | |
GCAGCAATTCCACTGAGATG+AGG | + | chr5.1:4797035-4797054 | None:intergenic | 50.0% | |
GCTCAAGCAGTTAAAGACGC+TGG | - | chr5.1:4796654-4796673 | MS.gene20363:CDS | 50.0% | |
GCTGCCATGATCCTCATGAA+TGG | - | chr5.1:4796681-4796700 | MS.gene20363:CDS | 50.0% | |
GCTGCTAGAATGTTCACTCC+AGG | + | chr5.1:4796945-4796964 | None:intergenic | 50.0% | |
TGTTGCAACCCCAAGAAGCT+TGG | + | chr5.1:4795793-4795812 | None:intergenic | 50.0% | |
! | CATGGCACCAGAAGCACATT+TGG | - | chr5.1:4796125-4796144 | MS.gene20363:CDS | 50.0% |
! | CCATCCTTCCTTTTCTGACG+AGG | - | chr5.1:4795891-4795910 | MS.gene20363:CDS | 50.0% |
! | CGAGGTAAAGAGCATACCAG+AGG | - | chr5.1:4797337-4797356 | MS.gene20363:CDS | 50.0% |
! | CTGTTGCCACTTGTGTATGC+AGG | - | chr5.1:4796510-4796529 | MS.gene20363:CDS | 50.0% |
AAGGGGTGGAGGGTCCATTA+AGG | + | chr5.1:4796254-4796273 | None:intergenic | 55.0% | |
ACGCCCTGAACATCAGAACC+TGG | + | chr5.1:4796726-4796745 | None:intergenic | 55.0% | |
AGGGGTGGAGGGTCCATTAA+GGG | + | chr5.1:4796253-4796272 | None:intergenic | 55.0% | |
CGGCCACTGTGAATTCACAG+GGG | - | chr5.1:4795942-4795961 | MS.gene20363:CDS | 55.0% | |
GCGCCGTGGATTCTAACTGT+TGG | - | chr5.1:4796384-4796403 | MS.gene20363:CDS | 55.0% | |
GTTCACATGTCCAGCACCAG+TGG | + | chr5.1:4797189-4797208 | None:intergenic | 55.0% | |
TAAGCTACTTGAGGGGCGAG+TGG | + | chr5.1:4796861-4796880 | None:intergenic | 55.0% | |
TCTCCGCCTGCGAAATGGAA+CGG | - | chr5.1:4795922-4795941 | MS.gene20363:CDS | 55.0% | |
TGGAACTCACACAGCCAGCA+CGG | - | chr5.1:4796041-4796060 | MS.gene20363:CDS | 55.0% | |
TTCCATTTCGCAGGCGGAGA+AGG | + | chr5.1:4795922-4795941 | None:intergenic | 55.0% | |
TTGGGGTTGCAACAGAGTCG+AGG | - | chr5.1:4795799-4795818 | MS.gene20363:CDS | 55.0% | |
!! | CAACGTCTAATGAAGCGCCG+TGG | - | chr5.1:4796370-4796389 | MS.gene20363:CDS | 55.0% |
!! | GGCTCTAGAAGAGAAGGAGG+AGG | - | chr5.1:4795717-4795736 | MS.gene20363:CDS | 55.0% |
CAGTGGCCGTTCCATTTCGC+AGG | + | chr5.1:4795931-4795950 | None:intergenic | 60.0% | |
GGACCAAGCCAAGAAAGCCC+AGG | - | chr5.1:4796894-4796913 | MS.gene20363:CDS | 60.0% | |
TGCCTTCTCCGCCTGCGAAA+TGG | - | chr5.1:4795917-4795936 | MS.gene20363:CDS | 60.0% | |
TGGCCGTTCCATTTCGCAGG+CGG | + | chr5.1:4795928-4795947 | None:intergenic | 60.0% | |
ACCTTGCACGGGCCTTCCAG+CGG | + | chr5.1:4796067-4796086 | None:intergenic | 65.0% | |
CACACAGCCAGCACGGCCGC+TGG | - | chr5.1:4796048-4796067 | MS.gene20363:CDS | 75.0% | |
CAGCCAGCACGGCCGCTGGA+AGG | - | chr5.1:4796052-4796071 | MS.gene20363:CDS | 75.0% | |
GCCGCTGGAAGGCCCGTGCA+AGG | - | chr5.1:4796063-4796082 | MS.gene20363:CDS | 75.0% | |
! | GGGCCTTCCAGCGGCCGTGC+TGG | + | chr5.1:4796058-4796077 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 4795415 | 4797670 | 4795415 | ID=MS.gene20363 |
chr5.1 | mRNA | 4795415 | 4797670 | 4795415 | ID=MS.gene20363.t1;Parent=MS.gene20363 |
chr5.1 | exon | 4795415 | 4797670 | 4795415 | ID=MS.gene20363.t1.exon1;Parent=MS.gene20363.t1 |
chr5.1 | CDS | 4795415 | 4797670 | 4795415 | ID=cds.MS.gene20363.t1;Parent=MS.gene20363.t1 |
Gene Sequence |
Protein sequence |