Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049656.t1 | RHN68036.1 | 84.6 | 247 | 35 | 1 | 1 | 244 | 17 | 263 | 3.10E-116 | 427.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049656.t1 | G7J785 | 84.6 | 247 | 35 | 1 | 1 | 244 | 1 | 247 | 2.2e-116 | 427.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene049656 | 0.818545 | 1.85E-52 | -1.69E-46 |
| MS.gene049552 | MS.gene049656 | 0.801924 | 7.16E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene049657 | 0.917547 | 4.65E-86 | -1.69E-46 |
| MS.gene049656 | MS.gene050170 | 0.822792 | 1.96E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene050323 | 0.811792 | 5.86E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene050496 | 0.800926 | 1.15E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene050502 | 0.811785 | 5.88E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene050697 | 0.810142 | 1.34E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene050868 | 0.805523 | 1.28E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene050871 | 0.8046 | 2.00E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene051509 | 0.807962 | 3.91E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene052066 | 0.829781 | 4.25E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene052482 | 0.804958 | 1.68E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene052486 | 0.823267 | 1.52E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene052506 | 0.808347 | 3.24E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene052822 | 0.803345 | 3.64E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene052823 | 0.803662 | 3.13E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene052966 | 0.810115 | 1.35E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene053436 | 0.818297 | 2.11E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene053574 | 0.817189 | 3.75E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene053626 | 0.830343 | 3.10E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene053633 | 0.810157 | 1.33E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene056040 | 0.809784 | 1.59E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene056166 | 0.820391 | 7.03E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene056504 | 0.813903 | 2.02E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene056878 | 0.855502 | 6.04E-62 | -1.69E-46 |
| MS.gene049656 | MS.gene05787 | 0.800386 | 1.48E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene058157 | 0.805668 | 1.19E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene05837 | 0.809423 | 1.91E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene059367 | 0.801553 | 8.53E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene05995 | 0.800132 | 1.66E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene05996 | 0.824568 | 7.52E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene060187 | -0.817296 | 3.55E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene060482 | 0.809561 | 1.78E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene060595 | -0.825608 | 4.27E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene060778 | 0.820772 | 5.75E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene060982 | 0.808255 | 3.39E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene061360 | 0.806902 | 6.56E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene061617 | 0.808619 | 2.83E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene061731 | 0.804876 | 1.75E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene061862 | 0.822113 | 2.82E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene061863 | 0.809846 | 1.55E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene062923 | 0.802817 | 4.69E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene062925 | 0.803772 | 2.97E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene063410 | 0.812439 | 4.24E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene063444 | 0.8106 | 1.06E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene06346 | 0.809999 | 1.43E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene063722 | 0.816021 | 6.86E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene064148 | 0.812591 | 3.92E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene064294 | 0.820283 | 7.45E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene064396 | 0.806958 | 6.39E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene064435 | 0.804787 | 1.83E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene064707 | 0.818018 | 2.44E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene064971 | 0.80372 | 3.05E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene065099 | 0.812616 | 3.88E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene065360 | 0.815467 | 9.11E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene065540 | 0.819858 | 9.31E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene066003 | 0.816199 | 6.25E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene066802 | 0.801373 | 9.28E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene067048 | 0.808718 | 2.70E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene06750 | 0.800869 | 1.18E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene067713 | 0.817624 | 2.99E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene068029 | 0.819591 | 1.07E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene069355 | 0.843855 | 1.08E-58 | -1.69E-46 |
| MS.gene049656 | MS.gene069356 | 0.807279 | 5.46E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene069593 | 0.801958 | 7.04E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene069855 | 0.816083 | 6.64E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene072303 | 0.868323 | 7.11E-66 | -1.69E-46 |
| MS.gene049656 | MS.gene072468 | 0.807305 | 5.39E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene072573 | 0.803223 | 3.86E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene073118 | 0.823885 | 1.09E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene07329 | 0.836256 | 1.04E-56 | -1.69E-46 |
| MS.gene049656 | MS.gene073883 | 0.831279 | 1.83E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene074598 | 0.809594 | 1.75E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene07636 | 0.919471 | 4.32E-87 | -1.69E-46 |
| MS.gene049656 | MS.gene08253 | 0.816851 | 4.47E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene08254 | 0.828236 | 1.01E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene08550 | 0.829974 | 3.81E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene08588 | 0.827255 | 1.73E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene08766 | 0.810113 | 1.35E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene09022 | -0.817942 | 2.54E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene09053 | 0.832332 | 1.00E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene09193 | 0.804192 | 2.43E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene09795 | 0.813807 | 2.12E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene09797 | 0.807073 | 6.04E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene20220 | 0.804307 | 2.30E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene20363 | 0.808162 | 3.55E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene20594 | 0.814801 | 1.28E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene20878 | 0.82145 | 4.01E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene21150 | 0.808772 | 2.63E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene21731 | 0.813259 | 2.80E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene21892 | 0.805138 | 1.54E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene22581 | 0.803814 | 2.91E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene22588 | 0.813549 | 2.42E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene22750 | 0.800607 | 1.33E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene22902 | 0.803277 | 3.76E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene22903 | 0.814248 | 1.70E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene22911 | 0.813671 | 2.27E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene23217 | 0.805254 | 1.46E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene23219 | 0.806107 | 9.66E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene23254 | 0.805208 | 1.49E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene24080 | 0.818731 | 1.68E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene24082 | 0.821046 | 4.97E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene24562 | 0.809573 | 1.77E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene24631 | 0.833345 | 5.63E-56 | -1.69E-46 |
| MS.gene049656 | MS.gene27116 | 0.825569 | 4.36E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene27117 | 0.816257 | 6.07E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene27254 | 0.815268 | 1.01E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene28105 | 0.805956 | 1.04E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene28990 | 0.800182 | 1.62E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene29014 | 0.825115 | 5.59E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene29182 | 0.818516 | 1.88E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene29992 | 0.808898 | 2.47E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene30150 | 0.80135 | 9.39E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene31105 | 0.865249 | 6.77E-65 | -1.69E-46 |
| MS.gene049656 | MS.gene31106 | 0.841693 | 4.07E-58 | -1.69E-46 |
| MS.gene049656 | MS.gene32652 | 0.818071 | 2.37E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene32996 | 0.813992 | 1.93E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene33768 | 0.816005 | 6.91E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene34171 | 0.845351 | 4.29E-59 | -1.69E-46 |
| MS.gene049656 | MS.gene34175 | 0.822799 | 1.95E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene34192 | 0.822178 | 2.72E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene34194 | 0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene34383 | 0.821699 | 3.51E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene34554 | 0.810768 | 9.78E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene35338 | 0.818642 | 1.76E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene36240 | 0.804306 | 2.30E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene38309 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene38765 | 0.822978 | 1.77E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene40110 | 0.807819 | 4.20E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene40943 | 0.810582 | 1.07E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene41234 | 0.806746 | 7.08E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene41487 | 0.804396 | 2.20E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene42301 | 0.821597 | 3.71E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene42674 | 0.81547 | 9.09E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene43963 | 0.822803 | 1.95E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene44017 | 0.819339 | 1.22E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene44296 | 0.804144 | 2.49E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene44305 | 0.827002 | 1.99E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene44639 | 0.814112 | 1.82E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene45542 | 0.816056 | 6.73E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene46955 | 0.81706 | 4.01E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene47377 | 0.810925 | 9.04E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene48646 | 0.840121 | 1.05E-57 | -1.69E-46 |
| MS.gene049656 | MS.gene48648 | 0.838167 | 3.38E-57 | -1.69E-46 |
| MS.gene049656 | MS.gene48649 | 0.833673 | 4.66E-56 | -1.69E-46 |
| MS.gene049656 | MS.gene50091 | 0.807965 | 3.91E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene50709 | 0.803877 | 2.83E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene50712 | 0.810408 | 1.17E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene51258 | 0.819015 | 1.45E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene51603 | 0.845064 | 5.13E-59 | -1.69E-46 |
| MS.gene049656 | MS.gene51840 | 0.829626 | 4.63E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene53595 | 0.806366 | 8.52E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene54068 | 0.8186 | 1.80E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene54413 | 0.826934 | 2.07E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene54415 | 0.839951 | 1.17E-57 | -1.69E-46 |
| MS.gene049656 | MS.gene54718 | 0.822286 | 2.57E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene55657 | 0.917737 | 3.69E-86 | -1.69E-46 |
| MS.gene049656 | MS.gene55803 | 0.814501 | 1.49E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene56598 | 0.81167 | 6.23E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene57140 | 0.829686 | 4.48E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene57239 | 0.812202 | 4.77E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene57394 | 0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene58021 | 0.806459 | 8.14E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene58416 | 0.809966 | 1.46E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene59603 | 0.817657 | 2.94E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene63310 | 0.81416 | 1.77E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene63749 | -0.825213 | 5.30E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene63751 | -0.842466 | 2.54E-58 | -1.69E-46 |
| MS.gene049656 | MS.gene63788 | 0.812758 | 3.61E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene64151 | 0.808033 | 3.78E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene64286 | 0.812551 | 4.01E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene65400 | 0.803161 | 3.98E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene65675 | 0.821867 | 3.21E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene66774 | 0.802669 | 5.03E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene68529 | 0.835445 | 1.67E-56 | -1.69E-46 |
| MS.gene049656 | MS.gene68625 | 0.812162 | 4.87E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene68980 | 0.856585 | 2.91E-62 | -1.69E-46 |
| MS.gene049656 | MS.gene69259 | 0.806024 | 1.01E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene69450 | 0.820867 | 5.47E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene70212 | 0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene70809 | 0.800483 | 1.41E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene71267 | 0.804317 | 2.29E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene71268 | 0.806498 | 7.99E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene71651 | 0.829223 | 5.80E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene72055 | 0.811745 | 6.00E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene72181 | 0.800595 | 1.34E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene72257 | 0.801832 | 7.47E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene72786 | 0.804186 | 2.44E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene73493 | 0.815118 | 1.09E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene73546 | 0.82178 | 3.37E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene73547 | 0.817373 | 3.41E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene73909 | 0.801927 | 7.15E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene73910 | 0.814868 | 1.24E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene74575 | 0.801913 | 7.19E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene75560 | 0.830803 | 2.39E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene76027 | 0.80916 | 2.17E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene76840 | 0.819957 | 8.84E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene78281 | 0.827683 | 1.37E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene78396 | 0.866124 | 3.58E-65 | -1.69E-46 |
| MS.gene049656 | MS.gene80139 | 0.81395 | 1.97E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene80239 | 0.805359 | 1.39E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene81748 | 0.811148 | 8.09E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene81988 | 0.803462 | 3.45E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene82707 | 0.815424 | 9.31E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene82917 | 0.837318 | 5.58E-57 | -1.69E-46 |
| MS.gene049656 | MS.gene83251 | 0.837785 | 4.23E-57 | -1.69E-46 |
| MS.gene049656 | MS.gene84140 | 0.810346 | 1.21E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene85940 | 0.805024 | 1.63E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene86071 | 0.836262 | 1.04E-56 | -1.69E-46 |
| MS.gene049656 | MS.gene86083 | 0.820219 | 7.70E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene86293 | 0.815218 | 1.03E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene86294 | 0.802943 | 4.41E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene87054 | 0.814719 | 1.33E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene88820 | 0.819916 | 9.03E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene90216 | 0.82102 | 5.04E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene90269 | 0.832615 | 8.54E-56 | -1.69E-46 |
| MS.gene049656 | MS.gene91533 | 0.827638 | 1.40E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene92147 | 0.817454 | 3.27E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene92618 | 0.811407 | 7.11E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene92636 | 0.809312 | 2.01E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene94356 | 0.815766 | 7.81E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene94628 | 0.828568 | 8.36E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene95715 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene97422 | 0.80515 | 1.53E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene97656 | 0.830057 | 3.64E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene97862 | 0.813532 | 2.44E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene98139 | 0.811202 | 7.88E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene98166 | 0.822656 | 2.11E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049656.t1 | MTR_3g064020 | 84.615 | 247 | 35 | 1 | 1 | 244 | 1 | 247 | 3.40e-155 | 431 |
| MS.gene049656.t1 | MTR_5g076250 | 62.500 | 248 | 77 | 6 | 1 | 239 | 1 | 241 | 1.32e-95 | 280 |
| MS.gene049656.t1 | MTR_3g063990 | 54.980 | 251 | 71 | 4 | 9 | 221 | 3 | 249 | 8.25e-84 | 251 |
| MS.gene049656.t1 | MTR_1g057650 | 51.653 | 242 | 103 | 6 | 1 | 236 | 1 | 234 | 1.01e-73 | 225 |
| MS.gene049656.t1 | MTR_7g117750 | 43.983 | 241 | 121 | 5 | 1 | 236 | 1 | 232 | 1.74e-60 | 191 |
| MS.gene049656.t1 | MTR_3g063980 | 56.164 | 73 | 28 | 1 | 167 | 239 | 56 | 124 | 2.01e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049656.t1 | AT3G02700 | 57.917 | 240 | 89 | 6 | 1 | 236 | 1 | 232 | 3.14e-81 | 244 |
| MS.gene049656.t1 | AT5G06370 | 50.826 | 242 | 105 | 6 | 1 | 236 | 1 | 234 | 8.77e-74 | 225 |
| MS.gene049656.t1 | AT5G16360 | 47.101 | 276 | 96 | 8 | 1 | 236 | 1 | 266 | 5.11e-70 | 216 |
| MS.gene049656.t1 | AT4G00905 | 45.714 | 245 | 120 | 5 | 1 | 236 | 1 | 241 | 5.87e-63 | 197 |
| MS.gene049656.t1 | AT5G16330 | 47.325 | 243 | 98 | 8 | 1 | 236 | 9 | 228 | 7.72e-62 | 194 |
| MS.gene049656.t1 | AT1G01225 | 47.391 | 230 | 112 | 3 | 1 | 226 | 1 | 225 | 1.82e-61 | 194 |
Find 56 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTAGATTGCTTTCTTTC+AGG | 0.124117 | 3.2:-59561639 | MS.gene049656:CDS |
| GCTTTATATCTTCTTGAAAA+TGG | 0.152944 | 3.2:-59561501 | MS.gene049656:CDS |
| AAAAGATTGGTTTCTGATAT+TGG | 0.189791 | 3.2:-59561273 | MS.gene049656:CDS |
| ATGTTTCCGATCAGTCTTAT+TGG | 0.247318 | 3.2:+59562049 | None:intergenic |
| CACAGTTATTCTTGAAGATA+TGG | 0.269187 | 3.2:+59561466 | None:intergenic |
| TATCTTCTTGAAAATGGATT+TGG | 0.299009 | 3.2:-59561495 | MS.gene049656:CDS |
| TTTGCAGTTTATTGCAAAAC+AGG | 0.337490 | 3.2:-59561438 | MS.gene049656:CDS |
| TGCATGTGCCTCCTCTAGCT+TGG | 0.338272 | 3.2:+59561565 | None:intergenic |
| CCGCACCGTCACGACATCTT+TGG | 0.342473 | 3.2:+59561691 | None:intergenic |
| GAACTCTACCTCTTTCAATA+TGG | 0.373949 | 3.2:-59561612 | MS.gene049656:CDS |
| AACTTACTGCATTAAAAGAT+TGG | 0.377765 | 3.2:-59561286 | MS.gene049656:CDS |
| ATGGTGATCCATTTCACAAT+TGG | 0.385236 | 3.2:-59561792 | MS.gene049656:CDS |
| CTGGGGATCATATTTACTCT+TGG | 0.413378 | 3.2:-59562019 | MS.gene049656:CDS |
| CTTCCATCCATGGTCAAATC+AGG | 0.416092 | 3.2:+59561198 | None:intergenic |
| GCATGTGCCTCCTCTAGCTT+GGG | 0.419205 | 3.2:+59561566 | None:intergenic |
| CACATGCACCCTAGCTGCTT+CGG | 0.423293 | 3.2:-59561550 | MS.gene049656:CDS |
| ATCCATTTCACAATTGGATC+AGG | 0.464773 | 3.2:-59561786 | MS.gene049656:CDS |
| ATCGGAAACATCTAAAACCT+GGG | 0.479101 | 3.2:-59562037 | MS.gene049656:CDS |
| GGGATCATATTTACTCTTGG+AGG | 0.483005 | 3.2:-59562016 | MS.gene049656:CDS |
| ACAGGAATATATGTTGAAGA+TGG | 0.483154 | 3.2:-59561816 | MS.gene049656:intron |
| GTCCTGATCCAATTGTGAAA+TGG | 0.487607 | 3.2:+59561784 | None:intergenic |
| GGATCAGGACAGCAAGCTGC+TGG | 0.487944 | 3.2:-59561771 | MS.gene049656:CDS |
| CGAAAGAACTTGTAAAGAAA+CGG | 0.498819 | 3.2:+59561730 | None:intergenic |
| TCATATTTACTCTTGGAGGC+AGG | 0.503930 | 3.2:-59562012 | MS.gene049656:CDS |
| ATACCTGATTTGACCATGGA+TGG | 0.505525 | 3.2:-59561201 | MS.gene049656:CDS |
| GCTGGCAGCAGCTGAATAAG+AGG | 0.511661 | 3.2:+59561377 | None:intergenic |
| TGAAAGAAAGCAATCTAAGC+AGG | 0.512899 | 3.2:+59561641 | None:intergenic |
| ACATCTTTGGCATGGAATGT+TGG | 0.518788 | 3.2:+59561704 | None:intergenic |
| TTCAAGAAGATATAAAGCAC+GGG | 0.519285 | 3.2:+59561506 | None:intergenic |
| TGGAGACACCATATTGAAAG+AGG | 0.529495 | 3.2:+59561604 | None:intergenic |
| CAGTTGGATCCGAAGCAGCT+AGG | 0.530992 | 3.2:+59561541 | None:intergenic |
| AGTTGGATCCGAAGCAGCTA+GGG | 0.533238 | 3.2:+59561542 | None:intergenic |
| GTCGTGACGGTGCGGAAACA+AGG | 0.535193 | 3.2:-59561683 | MS.gene049656:CDS |
| AGTCTACTAGCTTCCATCCA+TGG | 0.540139 | 3.2:+59561188 | None:intergenic |
| GATCGGAAACATCTAAAACC+TGG | 0.543021 | 3.2:-59562038 | MS.gene049656:CDS |
| AAGAAACGGTATAAAATCGC+TGG | 0.543391 | 3.2:+59561744 | None:intergenic |
| TTTCAAGAAGATATAAAGCA+CGG | 0.545122 | 3.2:+59561505 | None:intergenic |
| CGGGGAAGGACCTCTTCAGT+TGG | 0.547650 | 3.2:+59561525 | None:intergenic |
| GGTAGGGCTTTGGTTTGCTG+TGG | 0.552956 | 3.2:-59561309 | MS.gene049656:CDS |
| TCAACCTCAAAAGGCTGCAG+TGG | 0.553525 | 3.2:-59561408 | MS.gene049656:CDS |
| TTAGATTGCTTTCTTTCAGG+AGG | 0.554330 | 3.2:-59561636 | MS.gene049656:CDS |
| TGCTTTCCAATAAGACTGAT+CGG | 0.558642 | 3.2:-59562055 | MS.gene049656:CDS |
| TGATGAAGAGTCTACAGTGC+TGG | 0.563974 | 3.2:+59561359 | None:intergenic |
| CAAGAGTAAATATGATCCCC+AGG | 0.568302 | 3.2:+59562020 | None:intergenic |
| CTGTAGACTCTTCATCACTT+CGG | 0.584097 | 3.2:-59561353 | MS.gene049656:CDS |
| CCGTCACGACATCTTTGGCA+TGG | 0.598030 | 3.2:+59561696 | None:intergenic |
| GAAGATATAAAGCACGGGGA+AGG | 0.600493 | 3.2:+59561511 | None:intergenic |
| AATATATGTTGAAGATGGAA+TGG | 0.601381 | 3.2:-59561811 | MS.gene049656:CDS |
| GCTTACCTCTATGCACATCA+TGG | 0.604488 | 3.2:-59561990 | MS.gene049656:intron |
| GGTGCGGAAACAAGGACTCA+TGG | 0.614117 | 3.2:-59561675 | MS.gene049656:CDS |
| GATGACCATGATGTGCATAG+AGG | 0.641641 | 3.2:+59561985 | None:intergenic |
| TGCTTCGGATCCAACTGAAG+AGG | 0.647462 | 3.2:-59561535 | MS.gene049656:CDS |
| CCAAAGATGTCGTGACGGTG+CGG | 0.654870 | 3.2:-59561691 | MS.gene049656:CDS |
| CCATGCCAAAGATGTCGTGA+CGG | 0.658966 | 3.2:-59561696 | MS.gene049656:CDS |
| TCAAGAAGATATAAAGCACG+GGG | 0.677622 | 3.2:+59561507 | None:intergenic |
| TCGGAAACATCTAAAACCTG+GGG | 0.712111 | 3.2:-59562036 | MS.gene049656:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTTGATACATAAGAAAA+TGG | + | chr3.2:59561349-59561368 | None:intergenic | 20.0% |
| ! | AACTTACTGCATTAAAAGAT+TGG | - | chr3.2:59561970-59561989 | MS.gene049656:intron | 25.0% |
| ! | AATATATGTTGAAGATGGAA+TGG | - | chr3.2:59561445-59561464 | MS.gene049656:CDS | 25.0% |
| ! | GCTTTATATCTTCTTGAAAA+TGG | - | chr3.2:59561755-59561774 | MS.gene049656:CDS | 25.0% |
| ! | TTTCAAGAAGATATAAAGCA+CGG | + | chr3.2:59561754-59561773 | None:intergenic | 25.0% |
| !! | TATCTTCTTGAAAATGGATT+TGG | - | chr3.2:59561761-59561780 | MS.gene049656:CDS | 25.0% |
| !! | TTGTGCAAGAAAGTATAAAT+TGG | + | chr3.2:59561319-59561338 | None:intergenic | 25.0% |
| !!! | AAAAGATTGGTTTCTGATAT+TGG | - | chr3.2:59561983-59562002 | MS.gene049656:intron | 25.0% |
| !!! | AAATCAGGTATTTTTTCAAC+TGG | + | chr3.2:59562046-59562065 | None:intergenic | 25.0% |
| ACAGGAATATATGTTGAAGA+TGG | - | chr3.2:59561440-59561459 | MS.gene049656:CDS | 30.0% | |
| CACAGTTATTCTTGAAGATA+TGG | + | chr3.2:59561793-59561812 | None:intergenic | 30.0% | |
| CGAAAGAACTTGTAAAGAAA+CGG | + | chr3.2:59561529-59561548 | None:intergenic | 30.0% | |
| TCAGTATGATAGTTATGCAT+AGG | + | chr3.2:59561374-59561393 | None:intergenic | 30.0% | |
| TTCAAGAAGATATAAAGCAC+GGG | + | chr3.2:59561753-59561772 | None:intergenic | 30.0% | |
| TTGGGCTAAAAAATGTAGTT+TGG | + | chr3.2:59561675-59561694 | None:intergenic | 30.0% | |
| TTTGCAGTTTATTGCAAAAC+AGG | - | chr3.2:59561818-59561837 | MS.gene049656:intron | 30.0% | |
| ! | AAAAATACCTGATTTGACCA+TGG | - | chr3.2:59562051-59562070 | MS.gene049656:CDS | 30.0% |
| AAGAAACGGTATAAAATCGC+TGG | + | chr3.2:59561515-59561534 | None:intergenic | 35.0% | |
| ATCCATTTCACAATTGGATC+AGG | - | chr3.2:59561470-59561489 | MS.gene049656:CDS | 35.0% | |
| ATGGTGATCCATTTCACAAT+TGG | - | chr3.2:59561464-59561483 | MS.gene049656:CDS | 35.0% | |
| CGGCATTTCTGTAATATAAC+AGG | - | chr3.2:59561422-59561441 | MS.gene049656:CDS | 35.0% | |
| GAACTCTACCTCTTTCAATA+TGG | - | chr3.2:59561644-59561663 | MS.gene049656:CDS | 35.0% | |
| TCAAGAAGATATAAAGCACG+GGG | + | chr3.2:59561752-59561771 | None:intergenic | 35.0% | |
| TCATATTTGTGTCCTGCTAA+CGG | - | chr3.2:59561402-59561421 | MS.gene049656:CDS | 35.0% | |
| TGAAAGAAAGCAATCTAAGC+AGG | + | chr3.2:59561618-59561637 | None:intergenic | 35.0% | |
| TGCTTAGATTGCTTTCTTTC+AGG | - | chr3.2:59561617-59561636 | MS.gene049656:CDS | 35.0% | |
| TGCTTTCCAATAAGACTGAT+CGG | - | chr3.2:59561201-59561220 | MS.gene049656:CDS | 35.0% | |
| TTAGATTGCTTTCTTTCAGG+AGG | - | chr3.2:59561620-59561639 | MS.gene049656:CDS | 35.0% | |
| ! | ATCGGAAACATCTAAAACCT+GGG | - | chr3.2:59561219-59561238 | MS.gene049656:CDS | 35.0% |
| ! | ATGTTTCCGATCAGTCTTAT+TGG | + | chr3.2:59561210-59561229 | None:intergenic | 35.0% |
| ! | TTTGTGAACTCCAGTCTTTT+TGG | - | chr3.2:59561926-59561945 | MS.gene049656:intron | 35.0% |
| !!! | GGTCTTTTTTCAACCTCAAA+AGG | - | chr3.2:59561839-59561858 | MS.gene049656:intron | 35.0% |
| ACATCTTTGGCATGGAATGT+TGG | + | chr3.2:59561555-59561574 | None:intergenic | 40.0% | |
| ATTACAGAAATGCCGTTAGC+AGG | + | chr3.2:59561417-59561436 | None:intergenic | 40.0% | |
| CAAGAGTAAATATGATCCCC+AGG | + | chr3.2:59561239-59561258 | None:intergenic | 40.0% | |
| CTGGGGATCATATTTACTCT+TGG | - | chr3.2:59561237-59561256 | MS.gene049656:CDS | 40.0% | |
| CTGTAGACTCTTCATCACTT+CGG | - | chr3.2:59561903-59561922 | MS.gene049656:intron | 40.0% | |
| GGGATCATATTTACTCTTGG+AGG | - | chr3.2:59561240-59561259 | MS.gene049656:CDS | 40.0% | |
| GTCCTGATCCAATTGTGAAA+TGG | + | chr3.2:59561475-59561494 | None:intergenic | 40.0% | |
| TCATATTTACTCTTGGAGGC+AGG | - | chr3.2:59561244-59561263 | MS.gene049656:CDS | 40.0% | |
| TGGAGACACCATATTGAAAG+AGG | + | chr3.2:59561655-59561674 | None:intergenic | 40.0% | |
| ! | ATACCTGATTTGACCATGGA+TGG | - | chr3.2:59562055-59562074 | MS.gene049656:CDS | 40.0% |
| ! | GATCGGAAACATCTAAAACC+TGG | - | chr3.2:59561218-59561237 | MS.gene049656:CDS | 40.0% |
| ! | TCGGAAACATCTAAAACCTG+GGG | - | chr3.2:59561220-59561239 | MS.gene049656:CDS | 40.0% |
| !! | GAACTCCAGTCTTTTTGGTA+GGG | - | chr3.2:59561931-59561950 | MS.gene049656:intron | 40.0% |
| !! | TGAACTCCAGTCTTTTTGGT+AGG | - | chr3.2:59561930-59561949 | MS.gene049656:intron | 40.0% |
| !!! | CATTTTTTAGCCCAAGCTAG+AGG | - | chr3.2:59561680-59561699 | MS.gene049656:CDS | 40.0% |
| CAAAGCCCTACCAAAAAGAC+TGG | + | chr3.2:59561939-59561958 | None:intergenic | 45.0% | |
| CTTCCATCCATGGTCAAATC+AGG | + | chr3.2:59562061-59562080 | None:intergenic | 45.0% | |
| GAAGATATAAAGCACGGGGA+AGG | + | chr3.2:59561748-59561767 | None:intergenic | 45.0% | |
| GATGACCATGATGTGCATAG+AGG | + | chr3.2:59561274-59561293 | None:intergenic | 45.0% | |
| GCTTACCTCTATGCACATCA+TGG | - | chr3.2:59561266-59561285 | MS.gene049656:CDS | 45.0% | |
| TGATGAAGAGTCTACAGTGC+TGG | + | chr3.2:59561900-59561919 | None:intergenic | 45.0% | |
| !! | CAGTCTTTTTGGTAGGGCTT+TGG | - | chr3.2:59561937-59561956 | MS.gene049656:intron | 45.0% |
| !! | TTTTTAGCCCAAGCTAGAGG+AGG | - | chr3.2:59561683-59561702 | MS.gene049656:CDS | 45.0% |
| AGTTGGATCCGAAGCAGCTA+GGG | + | chr3.2:59561717-59561736 | None:intergenic | 50.0% | |
| CCATGCCAAAGATGTCGTGA+CGG | - | chr3.2:59561560-59561579 | MS.gene049656:CDS | 50.0% | |
| TCAACCTCAAAAGGCTGCAG+TGG | - | chr3.2:59561848-59561867 | MS.gene049656:intron | 50.0% | |
| TGCTTCGGATCCAACTGAAG+AGG | - | chr3.2:59561721-59561740 | MS.gene049656:CDS | 50.0% | |
| ! | TTGACCACTGCAGCCTTTTG+AGG | + | chr3.2:59561855-59561874 | None:intergenic | 50.0% |
| CACATGCACCCTAGCTGCTT+CGG | - | chr3.2:59561706-59561725 | MS.gene049656:CDS | 55.0% | |
| CAGTTGGATCCGAAGCAGCT+AGG | + | chr3.2:59561718-59561737 | None:intergenic | 55.0% | |
| CCAAAGATGTCGTGACGGTG+CGG | - | chr3.2:59561565-59561584 | MS.gene049656:CDS | 55.0% | |
| CCGTCACGACATCTTTGGCA+TGG | + | chr3.2:59561563-59561582 | None:intergenic | 55.0% | |
| GCTGGCAGCAGCTGAATAAG+AGG | + | chr3.2:59561882-59561901 | None:intergenic | 55.0% | |
| GGTGCGGAAACAAGGACTCA+TGG | - | chr3.2:59561581-59561600 | MS.gene049656:CDS | 55.0% | |
| TGCATGTGCCTCCTCTAGCT+TGG | + | chr3.2:59561694-59561713 | None:intergenic | 55.0% | |
| ! | GCATGTGCCTCCTCTAGCTT+GGG | + | chr3.2:59561693-59561712 | None:intergenic | 55.0% |
| !! | GGTAGGGCTTTGGTTTGCTG+TGG | - | chr3.2:59561947-59561966 | MS.gene049656:intron | 55.0% |
| CCGCACCGTCACGACATCTT+TGG | + | chr3.2:59561568-59561587 | None:intergenic | 60.0% | |
| CGGGGAAGGACCTCTTCAGT+TGG | + | chr3.2:59561734-59561753 | None:intergenic | 60.0% | |
| GGATCAGGACAGCAAGCTGC+TGG | - | chr3.2:59561485-59561504 | MS.gene049656:CDS | 60.0% | |
| GTCGTGACGGTGCGGAAACA+AGG | - | chr3.2:59561573-59561592 | MS.gene049656:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 59561194 | 59562084 | 59561194 | ID=MS.gene049656 |
| chr3.2 | mRNA | 59561194 | 59562084 | 59561194 | ID=MS.gene049656.t1;Parent=MS.gene049656 |
| chr3.2 | exon | 59561991 | 59562084 | 59561991 | ID=MS.gene049656.t1.exon1;Parent=MS.gene049656.t1 |
| chr3.2 | CDS | 59561991 | 59562084 | 59561991 | ID=cds.MS.gene049656.t1;Parent=MS.gene049656.t1 |
| chr3.2 | exon | 59561194 | 59561834 | 59561194 | ID=MS.gene049656.t1.exon2;Parent=MS.gene049656.t1 |
| chr3.2 | CDS | 59561194 | 59561834 | 59561194 | ID=cds.MS.gene049656.t1;Parent=MS.gene049656.t1 |
| Gene Sequence |
| Protein sequence |
