Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050031.t1 | XP_003618715.1 | 54.7 | 245 | 21 | 2 | 1 | 155 | 167 | 411 | 2.30E-43 | 185.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050031.t1 | G7KMP3 | 54.7 | 245 | 21 | 2 | 1 | 155 | 167 | 411 | 1.7e-43 | 185.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050026 | MS.gene050031 | 0.825832 | 3.78E-54 | -1.69E-46 |
| MS.gene050029 | MS.gene050031 | 0.915816 | 3.75E-85 | -1.69E-46 |
| MS.gene050031 | MS.gene050043 | 0.915087 | 8.93E-85 | -1.69E-46 |
| MS.gene050031 | MS.gene067208 | 0.811222 | 7.80E-51 | -1.69E-46 |
| MS.gene050031 | MS.gene071342 | 0.804333 | 2.27E-49 | -1.69E-46 |
| MS.gene050031 | MS.gene07394 | 0.811145 | 8.10E-51 | -1.69E-46 |
| MS.gene050031 | MS.gene07815 | 0.804506 | 2.09E-49 | -1.69E-46 |
| MS.gene050031 | MS.gene09417 | 0.814257 | 1.69E-51 | -1.69E-46 |
| MS.gene050031 | MS.gene20707 | -0.801606 | 8.32E-49 | -1.69E-46 |
| MS.gene050031 | MS.gene45507 | 0.805663 | 1.20E-49 | -1.69E-46 |
| MS.gene050031 | MS.gene54090 | 0.805701 | 1.18E-49 | -1.69E-46 |
| MS.gene050031 | MS.gene59540 | 0.81349 | 2.49E-51 | -1.69E-46 |
| MS.gene050031 | MS.gene68824 | 0.842027 | 3.32E-58 | -1.69E-46 |
| MS.gene050031 | MS.gene68826 | 0.825267 | 5.15E-54 | -1.69E-46 |
| MS.gene050031 | MS.gene75963 | 0.803971 | 2.70E-49 | -1.69E-46 |
| MS.gene050031 | MS.gene76148 | 0.800161 | 1.64E-48 | -1.69E-46 |
| MS.gene050031 | MS.gene79568 | 0.822205 | 2.68E-53 | -1.69E-46 |
| MS.gene050031 | MS.gene90651 | 0.828844 | 7.17E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050031.t1 | MTR_6g015010 | 73.810 | 126 | 15 | 1 | 1 | 108 | 167 | 292 | 2.59e-44 | 152 |
| MS.gene050031.t1 | MTR_6g015010 | 89.286 | 56 | 6 | 0 | 107 | 162 | 363 | 418 | 4.68e-25 | 100 |
| MS.gene050031.t1 | MTR_7g013070 | 67.857 | 56 | 18 | 0 | 107 | 162 | 334 | 389 | 3.89e-17 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050031.t1 | AT5G15510 | 64.286 | 56 | 20 | 0 | 107 | 162 | 369 | 424 | 7.40e-17 | 77.0 |
| MS.gene050031.t1 | AT5G15510 | 38.261 | 115 | 63 | 3 | 1 | 108 | 186 | 299 | 4.02e-12 | 63.5 |
| MS.gene050031.t1 | AT5G15510 | 64.286 | 56 | 20 | 0 | 107 | 162 | 369 | 424 | 7.40e-17 | 77.0 |
| MS.gene050031.t1 | AT5G15510 | 38.261 | 115 | 63 | 3 | 1 | 108 | 186 | 299 | 4.02e-12 | 63.5 |
| MS.gene050031.t1 | AT5G15510 | 64.286 | 56 | 20 | 0 | 107 | 162 | 369 | 424 | 8.74e-17 | 77.0 |
| MS.gene050031.t1 | AT5G15510 | 38.261 | 115 | 63 | 3 | 1 | 108 | 186 | 299 | 3.04e-12 | 63.9 |
| MS.gene050031.t1 | AT5G15510 | 64.286 | 56 | 20 | 0 | 107 | 162 | 369 | 424 | 1.00e-16 | 76.6 |
| MS.gene050031.t1 | AT5G15510 | 38.261 | 115 | 63 | 3 | 1 | 108 | 186 | 299 | 4.09e-12 | 63.5 |
| MS.gene050031.t1 | AT3G01015 | 63.636 | 55 | 20 | 0 | 108 | 162 | 360 | 414 | 1.02e-15 | 73.9 |
| MS.gene050031.t1 | AT3G01015 | 38.655 | 119 | 60 | 2 | 1 | 108 | 173 | 289 | 7.96e-12 | 62.8 |
Find 38 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGGTTACTTAGTATAAAA+AGG | 0.150829 | 5.4:-51216547 | MS.gene050031:CDS |
| AGGAATAGTATACCTGAAAA+TGG | 0.240990 | 5.4:-51216599 | MS.gene050031:CDS |
| GAGCAATCTGAAGTTGTTTC+TGG | 0.276694 | 5.4:-51216419 | MS.gene050031:CDS |
| TGCTAGTTTGTTTACTGCTT+GGG | 0.315351 | 5.4:-51216381 | MS.gene050031:CDS |
| TCCCTTACAGTTGGCTGAAT+AGG | 0.336982 | 5.4:-51214833 | None:intergenic |
| AGAGAATGAGAAGAAGAATA+AGG | 0.338941 | 5.4:-51216498 | MS.gene050031:CDS |
| TGCACCTGATGATCAAATTC+CGG | 0.346673 | 5.4:+51215088 | None:intergenic |
| AGAAGAATAAGGTGATGAAA+TGG | 0.355774 | 5.4:-51216487 | MS.gene050031:CDS |
| GCACCTGATGATCAAATTCC+GGG | 0.368237 | 5.4:+51215089 | None:intergenic |
| GAAGAATAAGGTGATGAAAT+GGG | 0.371425 | 5.4:-51216486 | MS.gene050031:CDS |
| TGCTCATCTTCATCCTCAAC+AGG | 0.390012 | 5.4:+51216437 | None:intergenic |
| GTGTGTAGCAGGAACTCTTC+TGG | 0.394499 | 5.4:-51216208 | MS.gene050031:CDS |
| AGAACAACAGAAAAGGGAAT+TGG | 0.400583 | 5.4:-51214965 | MS.gene050031:CDS |
| ATGCTAGTTTGTTTACTGCT+TGG | 0.408757 | 5.4:-51216382 | MS.gene050031:CDS |
| AGGCTTTGTGCTTTCTTTCA+CGG | 0.409057 | 5.4:+51215153 | None:intergenic |
| CTATGAAGCTTCACATCAAT+AGG | 0.425787 | 5.4:+51215133 | None:intergenic |
| GGCTTTGTGCTTTCTTTCAC+GGG | 0.443138 | 5.4:+51215154 | None:intergenic |
| TCGCCCGGAATTTGATCATC+AGG | 0.444522 | 5.4:-51215092 | MS.gene050031:intron |
| GGGATTGTGGAAGTGGAAGA+AGG | 0.460575 | 5.4:-51216361 | MS.gene050031:intron |
| GGAATTGGAAATACAACAAA+AGG | 0.463028 | 5.4:-51214950 | MS.gene050031:intron |
| GGAATAGTATACCTGAAAAT+GGG | 0.472624 | 5.4:-51216598 | MS.gene050031:CDS |
| TTGTTTACTGCTTGGGATTG+TGG | 0.473847 | 5.4:-51216374 | MS.gene050031:CDS |
| TTTGATAGAACAACAGAAAA+GGG | 0.474688 | 5.4:-51214971 | MS.gene050031:CDS |
| GTTTGATAGAACAACAGAAA+AGG | 0.481566 | 5.4:-51214972 | MS.gene050031:CDS |
| GAAAGAGAAGAATGAGGATG+AGG | 0.486091 | 5.4:-51216522 | MS.gene050031:CDS |
| GTGATGAAATGGGGATTACA+TGG | 0.497700 | 5.4:-51216476 | MS.gene050031:CDS |
| GAAGCTTCATAGTGATTTGA+GGG | 0.498697 | 5.4:-51215122 | MS.gene050031:CDS |
| TGAAGCTTCATAGTGATTTG+AGG | 0.503817 | 5.4:-51215123 | MS.gene050031:CDS |
| TTTGAGGGCAATTGATCGCC+CGG | 0.517154 | 5.4:-51215107 | MS.gene050031:CDS |
| ACTGCTTGGGATTGTGGAAG+TGG | 0.521266 | 5.4:-51216368 | MS.gene050031:CDS |
| AAATGGGAAAGTGATGCATT+TGG | 0.528141 | 5.4:-51216582 | MS.gene050031:CDS |
| GCAATTTCAACAACCTGTTG+AGG | 0.537406 | 5.4:-51216450 | MS.gene050031:CDS |
| AGAGAGTAATGGAAGAAGCA+AGG | 0.549720 | 5.4:-51216619 | None:intergenic |
| AAGAATAAGGTGATGAAATG+GGG | 0.564108 | 5.4:-51216485 | MS.gene050031:CDS |
| AAGGGAGAAAGAGAAGAATG+AGG | 0.575728 | 5.4:-51216528 | MS.gene050031:CDS |
| GAAAGTGATGCATTTGGTGA+AGG | 0.605917 | 5.4:-51216576 | MS.gene050031:CDS |
| TTTGTGCTTTCTTTCACGGG+AGG | 0.620777 | 5.4:+51215157 | None:intergenic |
| TGTAGCAGGAACTCTTCTGG+TGG | 0.669446 | 5.4:-51216205 | MS.gene050031:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATTCTTTACATTGA+CGG | - | chr5.4:51215848-51215867 | MS.gene050031:intron | 15.0% |
| !! | AAAACTTTCAGTTTATTTGA+TGG | - | chr5.4:51215807-51215826 | MS.gene050031:intron | 20.0% |
| !! | ACTATAATACTAATGAAGAT+TGG | - | chr5.4:51215424-51215443 | MS.gene050031:intron | 20.0% |
| !! | CAAATTTATCATAATTCTGT+TGG | - | chr5.4:51216213-51216232 | MS.gene050031:intron | 20.0% |
| ! | AGAGGTTACTTAGTATAAAA+AGG | - | chr5.4:51214898-51214917 | MS.gene050031:intron | 25.0% |
| ! | ATAGCAATTCTCAATTAGAA+CGG | - | chr5.4:51215987-51216006 | MS.gene050031:intron | 25.0% |
| ! | ATGCTAGGATATTAGATATA+AGG | + | chr5.4:51215953-51215972 | None:intergenic | 25.0% |
| ! | GAGGTTACTTAGTATAAAAA+GGG | - | chr5.4:51214899-51214918 | MS.gene050031:intron | 25.0% |
| ! | TCATGATGTGTAAAACTAAA+GGG | + | chr5.4:51216405-51216424 | None:intergenic | 25.0% |
| ! | TCATTTCTGCAAAATGTTAT+CGG | - | chr5.4:51215375-51215394 | MS.gene050031:intron | 25.0% |
| ! | TGTATTTCCATTTGTGATTA+AGG | - | chr5.4:51215311-51215330 | MS.gene050031:intron | 25.0% |
| ! | TTAGTGATTCACTATTAACA+AGG | - | chr5.4:51215447-51215466 | MS.gene050031:intron | 25.0% |
| ! | TTCATGATGTGTAAAACTAA+AGG | + | chr5.4:51216406-51216425 | None:intergenic | 25.0% |
| ! | TTTGATAGAACAACAGAAAA+GGG | - | chr5.4:51216474-51216493 | MS.gene050031:CDS | 25.0% |
| !! | CTTTTAGATAAAGGAAAACA+TGG | + | chr5.4:51216575-51216594 | None:intergenic | 25.0% |
| !!! | GTAATTTGTTAATCAAGCAT+AGG | - | chr5.4:51215599-51215618 | MS.gene050031:intron | 25.0% |
| AAACATGGCAACTCAAAATT+AGG | + | chr5.4:51216560-51216579 | None:intergenic | 30.0% | |
| AAGAATAAGGTGATGAAATG+GGG | - | chr5.4:51214960-51214979 | MS.gene050031:CDS | 30.0% | |
| AGAAGAATAAGGTGATGAAA+TGG | - | chr5.4:51214958-51214977 | MS.gene050031:CDS | 30.0% | |
| AGAGAATGAGAAGAAGAATA+AGG | - | chr5.4:51214947-51214966 | MS.gene050031:intron | 30.0% | |
| AGCATATACACTTCAAACTA+AGG | + | chr5.4:51215525-51215544 | None:intergenic | 30.0% | |
| AGGAATAGTATACCTGAAAA+TGG | - | chr5.4:51214846-51214865 | MS.gene050031:intron | 30.0% | |
| ATCGTAATTGCATTACATGA+TGG | + | chr5.4:51215669-51215688 | None:intergenic | 30.0% | |
| CATGATGTGTAAAACTAAAG+GGG | + | chr5.4:51216404-51216423 | None:intergenic | 30.0% | |
| CTTTATCTAAAAGTTGACGT+CGG | - | chr5.4:51216582-51216601 | MS.gene050031:CDS | 30.0% | |
| GAAGAATAAGGTGATGAAAT+GGG | - | chr5.4:51214959-51214978 | MS.gene050031:CDS | 30.0% | |
| GAATTAAATCTGTGAGTAGT+TGG | - | chr5.4:51215878-51215897 | MS.gene050031:intron | 30.0% | |
| GGAATAGTATACCTGAAAAT+GGG | - | chr5.4:51214847-51214866 | MS.gene050031:intron | 30.0% | |
| GGAATTGGAAATACAACAAA+AGG | - | chr5.4:51216495-51216514 | MS.gene050031:CDS | 30.0% | |
| GTTTGATAGAACAACAGAAA+AGG | - | chr5.4:51216473-51216492 | MS.gene050031:CDS | 30.0% | |
| TAACAACTCACAGTCAAATT+TGG | - | chr5.4:51215548-51215567 | MS.gene050031:intron | 30.0% | |
| TCGTAATTGCATTACATGAT+GGG | + | chr5.4:51215668-51215687 | None:intergenic | 30.0% | |
| TCTAATATCCTAGCATAACA+TGG | - | chr5.4:51215957-51215976 | MS.gene050031:intron | 30.0% | |
| TTACGATTATAGCTTATGTC+TGG | - | chr5.4:51215682-51215701 | MS.gene050031:intron | 30.0% | |
| AAATGGGAAAGTGATGCATT+TGG | - | chr5.4:51214863-51214882 | MS.gene050031:intron | 35.0% | |
| ACTATTAACAAGGTCTTCCA+TGG | - | chr5.4:51215457-51215476 | MS.gene050031:intron | 35.0% | |
| AGAACAACAGAAAAGGGAAT+TGG | - | chr5.4:51216480-51216499 | MS.gene050031:CDS | 35.0% | |
| AGACTCAAGAGGATGTTTAT+TGG | + | chr5.4:51216081-51216100 | None:intergenic | 35.0% | |
| ATTTGTGATTAAGGCATGTC+CGG | - | chr5.4:51215320-51215339 | MS.gene050031:intron | 35.0% | |
| CTATGAAGCTTCACATCAAT+AGG | + | chr5.4:51216315-51216334 | None:intergenic | 35.0% | |
| CTGTAACAGAAGAATGCTAA+TGG | + | chr5.4:51216256-51216275 | None:intergenic | 35.0% | |
| GAAGCTTCATAGTGATTTGA+GGG | - | chr5.4:51216323-51216342 | MS.gene050031:intron | 35.0% | |
| GGTTTATATTCCCTTACAGT+TGG | - | chr5.4:51216603-51216622 | MS.gene050031:CDS | 35.0% | |
| TAACGCAGCAACATCATTAA+GGG | + | chr5.4:51216054-51216073 | None:intergenic | 35.0% | |
| TCAATTAGAACGGTACATTG+TGG | - | chr5.4:51215997-51216016 | MS.gene050031:intron | 35.0% | |
| TGAAGCTTCATAGTGATTTG+AGG | - | chr5.4:51216322-51216341 | MS.gene050031:intron | 35.0% | |
| TGATGAATGCTTAACTGTGT+AGG | - | chr5.4:51216435-51216454 | MS.gene050031:CDS | 35.0% | |
| TGGAGTTAATTCAGTTTCAG+TGG | - | chr5.4:51216121-51216140 | MS.gene050031:intron | 35.0% | |
| TTAACGCAGCAACATCATTA+AGG | + | chr5.4:51216055-51216074 | None:intergenic | 35.0% | |
| ! | ATAAATTTTCACGCACTGTC+AGG | - | chr5.4:51215714-51215733 | MS.gene050031:intron | 35.0% |
| ! | CGACGTCAACTTTTAGATAA+AGG | + | chr5.4:51216584-51216603 | None:intergenic | 35.0% |
| ! | CTGATTTGAGATGTGAAAGT+TGG | + | chr5.4:51216532-51216551 | None:intergenic | 35.0% |
| ! | TAAATTTTCACGCACTGTCA+GGG | - | chr5.4:51215715-51215734 | MS.gene050031:intron | 35.0% |
| !! | ATGCTAGTTTGTTTACTGCT+TGG | - | chr5.4:51215063-51215082 | MS.gene050031:intron | 35.0% |
| !! | ATTTGGTGAAGGTTTTTGAG+AGG | - | chr5.4:51214880-51214899 | MS.gene050031:intron | 35.0% |
| !! | GATGTGAAAGTTGGTAAACA+TGG | + | chr5.4:51216523-51216542 | None:intergenic | 35.0% |
| !! | TGCTAGTTTGTTTACTGCTT+GGG | - | chr5.4:51215064-51215083 | MS.gene050031:intron | 35.0% |
| AAGGGAGAAAGAGAAGAATG+AGG | - | chr5.4:51214917-51214936 | MS.gene050031:intron | 40.0% | |
| ACATATGGTCAAGACTCAAG+AGG | + | chr5.4:51216092-51216111 | None:intergenic | 40.0% | |
| ACTCCATATCAGCTGACATA+TGG | + | chr5.4:51216107-51216126 | None:intergenic | 40.0% | |
| ACTGATCATGTGTATGACTC+TGG | - | chr5.4:51215765-51215784 | MS.gene050031:intron | 40.0% | |
| ATCAACGTGTTAGTGACATG+CGG | - | chr5.4:51215399-51215418 | MS.gene050031:intron | 40.0% | |
| CGATTATAGCTTATGTCTGG+TGG | - | chr5.4:51215685-51215704 | MS.gene050031:intron | 40.0% | |
| GAAAGAGAAGAATGAGGATG+AGG | - | chr5.4:51214923-51214942 | MS.gene050031:intron | 40.0% | |
| GCAATTTCAACAACCTGTTG+AGG | - | chr5.4:51214995-51215014 | MS.gene050031:intron | 40.0% | |
| GGACATGCCTTAATCACAAA+TGG | + | chr5.4:51215321-51215340 | None:intergenic | 40.0% | |
| GTGATGAAATGGGGATTACA+TGG | - | chr5.4:51214969-51214988 | MS.gene050031:CDS | 40.0% | |
| TATCCTAGCATAACATGGCA+AGG | - | chr5.4:51215962-51215981 | MS.gene050031:intron | 40.0% | |
| TGACCATATGTCAGCTGATA+TGG | - | chr5.4:51216101-51216120 | MS.gene050031:intron | 40.0% | |
| TGAGAAATTGACCTTACCTC+AGG | + | chr5.4:51215495-51215514 | None:intergenic | 40.0% | |
| TGCACCTGATGATCAAATTC+CGG | + | chr5.4:51216360-51216379 | None:intergenic | 40.0% | |
| TTGTTTACTGCTTGGGATTG+TGG | - | chr5.4:51215071-51215090 | MS.gene050031:intron | 40.0% | |
| ! | ACAAACACAGAAAGTACACG+AGG | + | chr5.4:51216174-51216193 | None:intergenic | 40.0% |
| ! | AGGCTTTGTGCTTTCTTTCA+CGG | + | chr5.4:51216295-51216314 | None:intergenic | 40.0% |
| ! | CATGATCAGTTGAGAAGTAC+TGG | + | chr5.4:51215755-51215774 | None:intergenic | 40.0% |
| ! | GAAAGTGATGCATTTGGTGA+AGG | - | chr5.4:51214869-51214888 | MS.gene050031:intron | 40.0% |
| ! | GAGCAATCTGAAGTTGTTTC+TGG | - | chr5.4:51215026-51215045 | MS.gene050031:intron | 40.0% |
| ! | GCTAATGGACAAGCATTAGT+AGG | + | chr5.4:51215635-51215654 | None:intergenic | 40.0% |
| ! | TGCATCACTTTCCCATTTTC+AGG | + | chr5.4:51214861-51214880 | None:intergenic | 40.0% |
| ! | TTACATGATGGGACAATCAG+AGG | + | chr5.4:51215657-51215676 | None:intergenic | 40.0% |
| !! | ACGAGGTATTGTGAGCAATA+AGG | + | chr5.4:51216157-51216176 | None:intergenic | 40.0% |
| ATGGGACAATCAGAGGCTAA+TGG | + | chr5.4:51215650-51215669 | None:intergenic | 45.0% | |
| CTACTGATGAACCTGAGGTA+AGG | - | chr5.4:51215481-51215500 | MS.gene050031:intron | 45.0% | |
| GCACCTGATGATCAAATTCC+GGG | + | chr5.4:51216359-51216378 | None:intergenic | 45.0% | |
| TCACATCACATGTGTCGTGT+CGG | + | chr5.4:51215349-51215368 | None:intergenic | 45.0% | |
| TCAGGTTCATCAGTAGTCCA+TGG | + | chr5.4:51215477-51215496 | None:intergenic | 45.0% | |
| TCTCCTTGCCATGTTATGCT+AGG | + | chr5.4:51215968-51215987 | None:intergenic | 45.0% | |
| TGCTCATCTTCATCCTCAAC+AGG | + | chr5.4:51215011-51215030 | None:intergenic | 45.0% | |
| TTTGTGCTTTCTTTCACGGG+AGG | + | chr5.4:51216291-51216310 | None:intergenic | 45.0% | |
| ! | ATGGACTACTGATGAACCTG+AGG | - | chr5.4:51215476-51215495 | MS.gene050031:intron | 45.0% |
| ! | GGCTTTGTGCTTTCTTTCAC+GGG | + | chr5.4:51216294-51216313 | None:intergenic | 45.0% |
| ! | TTTTGTGCAGTGTGTGTAGC+AGG | - | chr5.4:51215226-51215245 | MS.gene050031:intron | 45.0% |
| ACTGCTTGGGATTGTGGAAG+TGG | - | chr5.4:51215077-51215096 | MS.gene050031:intron | 50.0% | |
| GGGATTGTGGAAGTGGAAGA+AGG | - | chr5.4:51215084-51215103 | MS.gene050031:intron | 50.0% | |
| GTGTGTAGCAGGAACTCTTC+TGG | - | chr5.4:51215237-51215256 | MS.gene050031:intron | 50.0% | |
| TCGCCCGGAATTTGATCATC+AGG | - | chr5.4:51216353-51216372 | MS.gene050031:intron | 50.0% | |
| TGTAGCAGGAACTCTTCTGG+TGG | - | chr5.4:51215240-51215259 | MS.gene050031:intron | 50.0% | |
| TTTGAGGGCAATTGATCGCC+CGG | - | chr5.4:51216338-51216357 | MS.gene050031:intron | 50.0% | |
| ACATGTGTCGTGTCGGACAC+CGG | + | chr5.4:51215342-51215361 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 51214834 | 51216633 | 51214834 | ID=MS.gene050031 |
| chr5.4 | mRNA | 51214834 | 51216633 | 51214834 | ID=MS.gene050031.t1;Parent=MS.gene050031 |
| chr5.4 | exon | 51216362 | 51216633 | 51216362 | ID=MS.gene050031.t1.exon1;Parent=MS.gene050031.t1 |
| chr5.4 | CDS | 51216362 | 51216633 | 51216362 | ID=cds.MS.gene050031.t1;Parent=MS.gene050031.t1 |
| chr5.4 | exon | 51216186 | 51216231 | 51216186 | ID=MS.gene050031.t1.exon2;Parent=MS.gene050031.t1 |
| chr5.4 | CDS | 51216186 | 51216231 | 51216186 | ID=cds.MS.gene050031.t1;Parent=MS.gene050031.t1 |
| chr5.4 | exon | 51215093 | 51215191 | 51215093 | ID=MS.gene050031.t1.exon3;Parent=MS.gene050031.t1 |
| chr5.4 | CDS | 51215093 | 51215191 | 51215093 | ID=cds.MS.gene050031.t1;Parent=MS.gene050031.t1 |
| chr5.4 | exon | 51214951 | 51215010 | 51214951 | ID=MS.gene050031.t1.exon4;Parent=MS.gene050031.t1 |
| chr5.4 | CDS | 51214951 | 51215010 | 51214951 | ID=cds.MS.gene050031.t1;Parent=MS.gene050031.t1 |
| chr5.4 | exon | 51214834 | 51214845 | 51214834 | ID=MS.gene050031.t1.exon5;Parent=MS.gene050031.t1 |
| chr5.4 | CDS | 51214834 | 51214845 | 51214834 | ID=cds.MS.gene050031.t1;Parent=MS.gene050031.t1 |
| Gene Sequence |
| Protein sequence |
