Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20835.t1 | XP_003591445.3 | 97.8 | 230 | 3 | 2 | 1 | 229 | 46 | 274 | 1.00E-121 | 446 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20835.t1 | Q9LZK4 | 41.4 | 244 | 116 | 8 | 1 | 227 | 46 | 279 | 6.4e-32 | 139.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20835.t1 | A0A396JRX5 | 97.8 | 230 | 3 | 2 | 1 | 229 | 46 | 274 | 7.4e-122 | 446.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene20835 | 0.801668 | 8.08E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene20835 | 0.825602 | 4.29E-54 | -1.69E-46 |
| MS.gene049915 | MS.gene20835 | 0.81285 | 3.44E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene20835 | 0.830466 | 2.89E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene20835 | 0.838294 | 3.13E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene20835 | 0.829542 | 4.86E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene20835 | -0.834112 | 3.62E-56 | -1.69E-46 |
| MS.gene050642 | MS.gene20835 | 0.803143 | 4.01E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene20835 | 0.80339 | 3.57E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene20835 | 0.804184 | 2.44E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene20835 | 0.801225 | 9.95E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene20835 | 0.836438 | 9.36E-57 | -1.69E-46 |
| MS.gene051983 | MS.gene20835 | 0.806183 | 9.31E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene20835 | 0.836838 | 7.40E-57 | -1.69E-46 |
| MS.gene053811 | MS.gene20835 | 0.80875 | 2.66E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene20835 | 0.814775 | 1.30E-51 | -1.69E-46 |
| MS.gene054184 | MS.gene20835 | 0.836464 | 9.21E-57 | -1.69E-46 |
| MS.gene054185 | MS.gene20835 | 0.832332 | 1.00E-55 | -1.69E-46 |
| MS.gene054542 | MS.gene20835 | 0.806206 | 9.20E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene20835 | 0.809425 | 1.90E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene20835 | 0.807769 | 4.30E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene20835 | 0.800449 | 1.43E-48 | -1.69E-46 |
| MS.gene05811 | MS.gene20835 | 0.808057 | 3.73E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene20835 | 0.816505 | 5.34E-52 | -1.69E-46 |
| MS.gene058710 | MS.gene20835 | 0.805992 | 1.02E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene20835 | 0.829218 | 5.82E-55 | -1.69E-46 |
| MS.gene059285 | MS.gene20835 | 0.802435 | 5.62E-49 | -1.69E-46 |
| MS.gene059421 | MS.gene20835 | 0.838565 | 2.67E-57 | -1.69E-46 |
| MS.gene05984 | MS.gene20835 | 0.822502 | 2.29E-53 | -1.69E-46 |
| MS.gene060404 | MS.gene20835 | 0.830513 | 2.82E-55 | -1.69E-46 |
| MS.gene060476 | MS.gene20835 | 0.805242 | 1.47E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene20835 | 0.802224 | 6.21E-49 | -1.69E-46 |
| MS.gene061085 | MS.gene20835 | 0.813419 | 2.58E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 42 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAATTTGAAGGATTATTA+AGG | 0.269142 | 1.4:+69722181 | None:intergenic |
| GAATTATGTGACGACATCTT+AGG | 0.277715 | 1.4:+69726900 | MS.gene20835:CDS |
| GTACGTGGAATTTGAACTTC+TGG | 0.344780 | 1.4:-69726789 | None:intergenic |
| TCCACACTACTTATGGTAAC+AGG | 0.346473 | 1.4:+69722301 | MS.gene20835:CDS |
| ATTTCATTGTCCGTTCTTCC+TGG | 0.346810 | 1.4:-69726573 | None:intergenic |
| GACAATGGAAAATTGTTTGC+TGG | 0.348197 | 1.4:+69726989 | MS.gene20835:CDS |
| GTGAAGCTCCACACTACTTA+TGG | 0.384648 | 1.4:+69722294 | MS.gene20835:CDS |
| AAGACTGTCTCCATCATCAT+TGG | 0.394370 | 1.4:-69727090 | None:intergenic |
| GGACGAACATCCATGATCTT+TGG | 0.402215 | 1.4:-69726666 | None:intergenic |
| AAGTCAAGAGAGAGAAATGA+TGG | 0.429496 | 1.4:+69727037 | MS.gene20835:CDS |
| TGGCAAGTGGCTAGCTATCA+TGG | 0.430055 | 1.4:-69726553 | None:intergenic |
| AATTATGTGACGACATCTTA+GGG | 0.454312 | 1.4:+69726901 | MS.gene20835:CDS |
| AACTATAGAGCCAAAGATCA+TGG | 0.469285 | 1.4:+69726656 | MS.gene20835:CDS |
| GAAAGAACAACCAATGATGA+TGG | 0.472679 | 1.4:+69727080 | MS.gene20835:CDS |
| GAGAGAGAAATGATGGGTGA+TGG | 0.498146 | 1.4:+69727044 | MS.gene20835:CDS |
| ATGTGGTAAAACAAGTCGTT+GGG | 0.503146 | 1.4:+69726701 | MS.gene20835:CDS |
| TTGAAGGATTATTAAGGTGC+GGG | 0.508154 | 1.4:+69722187 | None:intergenic |
| TTGAGAACTGACCTCAAAAG+AGG | 0.515320 | 1.4:+69722240 | MS.gene20835:CDS |
| ATGATAGCTAGCCACTTGCC+AGG | 0.516667 | 1.4:+69726555 | MS.gene20835:CDS |
| GGAAGAGTTGTAGACTAAGA+TGG | 0.530001 | 1.4:+69722208 | MS.gene20835:CDS |
| TGCTGAGGTGAGAATTCCAA+TGG | 0.535972 | 1.4:-69726602 | None:intergenic |
| TTACCACATTTACGCTTAGG+AGG | 0.541585 | 1.4:-69726687 | None:intergenic |
| AGGAAACATATCTGCTCAAG+AGG | 0.548913 | 1.4:+69722260 | MS.gene20835:CDS |
| AATGTGGTAAAACAAGTCGT+TGG | 0.554279 | 1.4:+69726700 | MS.gene20835:CDS |
| ATGACATTAATGAAGACAGT+GGG | 0.566755 | 1.4:+69726940 | MS.gene20835:CDS |
| AGAGAAATGATGGGTGATGG+AGG | 0.569392 | 1.4:+69727047 | MS.gene20835:CDS |
| TGTCCGTTCTTCCTGGCAAG+TGG | 0.570131 | 1.4:-69726566 | None:intergenic |
| TAGCCACTTGCCAGGAAGAA+CGG | 0.570228 | 1.4:+69726563 | MS.gene20835:CDS |
| AATTGTTTGCTGGAAACAAG+TGG | 0.575262 | 1.4:+69726999 | MS.gene20835:CDS |
| TTTGAAGGATTATTAAGGTG+CGG | 0.594972 | 1.4:+69722186 | None:intergenic |
| AGTCAAGAGAGAGAAATGAT+GGG | 0.595941 | 1.4:+69727038 | MS.gene20835:CDS |
| CAATCTAGTGAAGGAGTACG+TGG | 0.611516 | 1.4:-69726804 | None:intergenic |
| AAGTACTCATGTCAAGACAA+TGG | 0.614680 | 1.4:+69726974 | MS.gene20835:CDS |
| ATTGTTTGCTGGAAACAAGT+GGG | 0.617843 | 1.4:+69727000 | MS.gene20835:CDS |
| CGTCCTCCTAAGCGTAAATG+TGG | 0.619864 | 1.4:+69726684 | MS.gene20835:CDS |
| ACCTGTTACCATAAGTAGTG+TGG | 0.624649 | 1.4:-69722302 | None:intergenic |
| GAAAATAATTGATGACGTGG+AGG | 0.627952 | 1.4:+69726842 | MS.gene20835:CDS |
| ACAACTTCACAATCTAGTGA+AGG | 0.654135 | 1.4:-69726813 | None:intergenic |
| AGAGAAAATAATTGATGACG+TGG | 0.669316 | 1.4:+69726839 | MS.gene20835:CDS |
| GATGACATTAATGAAGACAG+TGG | 0.688798 | 1.4:+69726939 | MS.gene20835:CDS |
| AGTAGTGTGGAGCTTCACAA+TGG | 0.695094 | 1.4:-69722289 | None:intergenic |
| TGACATTAATGAAGACAGTG+GGG | 0.734598 | 1.4:+69726941 | MS.gene20835:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGAATAAGAAATAAA+AGG | - | chr1.4:69723248-69723267 | None:intergenic | 10.0% |
| !! | CAAAAAATAAAATACTTTAT+AGG | - | chr1.4:69725781-69725800 | None:intergenic | 10.0% |
| !! | TATTAAAATTATAACAATCT+GGG | + | chr1.4:69723590-69723609 | MS.gene20835:intron | 10.0% |
| !! | TTATTAAAATTATAACAATC+TGG | + | chr1.4:69723589-69723608 | MS.gene20835:intron | 10.0% |
| !!! | ATAATAGACTTTTTAAATAT+AGG | - | chr1.4:69724925-69724944 | None:intergenic | 10.0% |
| !!! | ATTTACATATTTTAAAGTTA+GGG | + | chr1.4:69722807-69722826 | MS.gene20835:intron | 10.0% |
| !!! | ATTTTCTTTAGTATTAATAA+CGG | - | chr1.4:69726760-69726779 | None:intergenic | 10.0% |
| !!! | CTATAAAGTATTTTATTTTT+TGG | + | chr1.4:69725779-69725798 | MS.gene20835:intron | 10.0% |
| !!! | TATTTTATCTACTTTTAAAT+AGG | + | chr1.4:69724663-69724682 | MS.gene20835:intron | 10.0% |
| !! | AAAAAAACTCTTAAATTTGA+TGG | - | chr1.4:69722496-69722515 | None:intergenic | 15.0% |
| !! | AAAAAACTCTTAAATTTGAT+GGG | - | chr1.4:69722495-69722514 | None:intergenic | 15.0% |
| !! | AAAAATTATTCCAGTTTAAT+TGG | - | chr1.4:69722961-69722980 | None:intergenic | 15.0% |
| !! | AAAATCCTATTTAAGTAAAT+AGG | - | chr1.4:69725079-69725098 | None:intergenic | 15.0% |
| !! | AAACAAAAAAAATCACAAAT+TGG | + | chr1.4:69726355-69726374 | MS.gene20835:intron | 15.0% |
| !! | AAAGAAAAACAAATATCATA+AGG | + | chr1.4:69725834-69725853 | MS.gene20835:intron | 15.0% |
| !! | ATAATATAGTTCAAATACAT+CGG | - | chr1.4:69725622-69725641 | None:intergenic | 15.0% |
| !! | ATTATTACAAATAAAGACAT+AGG | - | chr1.4:69722455-69722474 | None:intergenic | 15.0% |
| !! | TTTATTTGTAATAATGTAGA+TGG | + | chr1.4:69722460-69722479 | MS.gene20835:intron | 15.0% |
| !!! | AAAATTTACCCTTTTTATTT+AGG | + | chr1.4:69722404-69722423 | MS.gene20835:intron | 15.0% |
| !!! | AACAAAATCTTTAAAATAGA+GGG | - | chr1.4:69725514-69725533 | None:intergenic | 15.0% |
| !!! | AACAATTTAGTAGTTTTATT+TGG | - | chr1.4:69724085-69724104 | None:intergenic | 15.0% |
| !!! | ATCATTTTGCTAATAAATTT+TGG | + | chr1.4:69726421-69726440 | MS.gene20835:intron | 15.0% |
| !!! | CATTTACATATTTTAAAGTT+AGG | + | chr1.4:69722806-69722825 | MS.gene20835:intron | 15.0% |
| !!! | TAATGACTTTTATAATAAGT+AGG | - | chr1.4:69724636-69724655 | None:intergenic | 15.0% |
| !!! | TTTTATTTTCACTAAAAAGA+AGG | + | chr1.4:69723380-69723399 | MS.gene20835:intron | 15.0% |
| !!! | TTTTCCTACTTAAAAAAATA+AGG | - | chr1.4:69726018-69726037 | None:intergenic | 15.0% |
| !!! | TTTTCCTTATTTTTTTAAGT+AGG | + | chr1.4:69726011-69726030 | MS.gene20835:intron | 15.0% |
| !! | AAGAATGATCCTAAATAAAA+AGG | - | chr1.4:69722416-69722435 | None:intergenic | 20.0% |
| !! | AATAAGTACTAGTAATTTCA+AGG | + | chr1.4:69724365-69724384 | MS.gene20835:intron | 20.0% |
| !! | AATATACTAGTATATACACA+AGG | + | chr1.4:69726481-69726500 | MS.gene20835:intron | 20.0% |
| !! | AATTATGATTTGACGTTTAT+TGG | + | chr1.4:69726508-69726527 | MS.gene20835:intron | 20.0% |
| !! | ACAATGAAATTAAAAACCAT+TGG | + | chr1.4:69726586-69726605 | MS.gene20835:CDS | 20.0% |
| !! | AGAATGATCCTAAATAAAAA+GGG | - | chr1.4:69722415-69722434 | None:intergenic | 20.0% |
| !! | ATGTATGTAGTCTTTATTAT+AGG | + | chr1.4:69724750-69724769 | MS.gene20835:intron | 20.0% |
| !! | ATTATGATTTGACGTTTATT+GGG | + | chr1.4:69726509-69726528 | MS.gene20835:intron | 20.0% |
| !! | TAAGAATAAGAAATAAAAGG+TGG | - | chr1.4:69723245-69723264 | None:intergenic | 20.0% |
| !! | TCTTTATAATGTCCTAATAA+AGG | + | chr1.4:69724424-69724443 | MS.gene20835:intron | 20.0% |
| !! | TTGAATAAGTAGAAAATCTA+GGG | - | chr1.4:69726139-69726158 | None:intergenic | 20.0% |
| !!! | AATGACAAAGTTTTTTTTGA+AGG | - | chr1.4:69722615-69722634 | None:intergenic | 20.0% |
| !!! | AGAAGAATTTTGGAATTATA+AGG | - | chr1.4:69723642-69723661 | None:intergenic | 20.0% |
| !!! | ATAACTACACGTTATTATTT+TGG | - | chr1.4:69723961-69723980 | None:intergenic | 20.0% |
| !!! | CAACAAAATCTTTAAAATAG+AGG | - | chr1.4:69725515-69725534 | None:intergenic | 20.0% |
| !!! | CTAGTACTTATTATTTTTTG+AGG | - | chr1.4:69724357-69724376 | None:intergenic | 20.0% |
| !!! | CTCTATTTTAAAGATTTTGT+TGG | + | chr1.4:69725513-69725532 | MS.gene20835:intron | 20.0% |
| !!! | CTTTGTCATTAATTATTTCT+TGG | + | chr1.4:69722625-69722644 | MS.gene20835:intron | 20.0% |
| !!! | CTTTTTAAATATAGGCTTTA+AGG | - | chr1.4:69724917-69724936 | None:intergenic | 20.0% |
| !!! | GAAGAATTTTGGAATTATAA+GGG | - | chr1.4:69723641-69723660 | None:intergenic | 20.0% |
| !!! | TAACTACACGTTATTATTTT+GGG | - | chr1.4:69723960-69723979 | None:intergenic | 20.0% |
| !!! | TAATAAATTTTGGCATAAAG+TGG | + | chr1.4:69726431-69726450 | MS.gene20835:intron | 20.0% |
| !!! | TAGTAGTACGTATTATTTTT+TGG | + | chr1.4:69726328-69726347 | MS.gene20835:intron | 20.0% |
| !!! | TATGTTTTGGAATAATTTGT+GGG | + | chr1.4:69723049-69723068 | MS.gene20835:intron | 20.0% |
| !!! | TTTTAATAACATGCATAAAC+AGG | + | chr1.4:69725008-69725027 | MS.gene20835:intron | 20.0% |
| !!! | TTTTTCTTACGAAAAAACAA+AGG | - | chr1.4:69723011-69723030 | None:intergenic | 20.0% |
| ! | AAATATGTAAATGAAGAGTG+TGG | - | chr1.4:69722799-69722818 | None:intergenic | 25.0% |
| ! | AACTACACGTTATTAATTAG+TGG | - | chr1.4:69723928-69723947 | None:intergenic | 25.0% |
| ! | AATAAGAAATAAAAGGTGGT+GGG | - | chr1.4:69723241-69723260 | None:intergenic | 25.0% |
| ! | AATATTTGATAGAAGAACAC+GGG | - | chr1.4:69725575-69725594 | None:intergenic | 25.0% |
| ! | AATTGAATGAACCTAGAAAT+TGG | - | chr1.4:69724726-69724745 | None:intergenic | 25.0% |
| ! | AGGAAAATGCTAATTACTTA+AGG | - | chr1.4:69725998-69726017 | None:intergenic | 25.0% |
| ! | AGGACATTATAAAGAAAATC+CGG | - | chr1.4:69724419-69724438 | None:intergenic | 25.0% |
| ! | ATACTTTATAGGAAAACAGT+TGG | - | chr1.4:69725770-69725789 | None:intergenic | 25.0% |
| ! | ATTGTAAATGGTCTAATAGA+GGG | - | chr1.4:69723087-69723106 | None:intergenic | 25.0% |
| ! | CACAAATTATTCCAAAACAT+AGG | - | chr1.4:69723050-69723069 | None:intergenic | 25.0% |
| ! | CTTGACCTATTTACTTAAAT+AGG | + | chr1.4:69725071-69725090 | MS.gene20835:intron | 25.0% |
| ! | GAATATTTGATAGAAGAACA+CGG | - | chr1.4:69725576-69725595 | None:intergenic | 25.0% |
| ! | GTTGAATAAGTAGAAAATCT+AGG | - | chr1.4:69726140-69726159 | None:intergenic | 25.0% |
| ! | TAAAAGCCTATTTCACTATA+AGG | + | chr1.4:69724891-69724910 | MS.gene20835:intron | 25.0% |
| ! | TAAGCAAAAATCCAATTTCT+AGG | + | chr1.4:69724712-69724731 | MS.gene20835:intron | 25.0% |
| ! | TAATGTTTCACCAAATTGTT+AGG | - | chr1.4:69726294-69726313 | None:intergenic | 25.0% |
| ! | TACTTATTCAACGATACAAA+CGG | + | chr1.4:69726148-69726167 | MS.gene20835:intron | 25.0% |
| ! | TGTTGAATGAAAAAAACCAT+TGG | - | chr1.4:69723212-69723231 | None:intergenic | 25.0% |
| ! | TTCTTAAGAAACATTGACAT+TGG | + | chr1.4:69725703-69725722 | MS.gene20835:intron | 25.0% |
| ! | TTTCTCTATAAATAGAGACT+TGG | - | chr1.4:69723497-69723516 | None:intergenic | 25.0% |
| !! | AAATTTAAAATACTCGTGTC+AGG | + | chr1.4:69722923-69722942 | MS.gene20835:intron | 25.0% |
| !! | ACACTACACGTTATTATTTT+AGG | - | chr1.4:69723898-69723917 | None:intergenic | 25.0% |
| !! | ATTTGGTGAAACATTAAATG+AGG | + | chr1.4:69726298-69726317 | MS.gene20835:intron | 25.0% |
| !! | GTGGAATATTAATTTTGTGT+TGG | - | chr1.4:69722752-69722771 | None:intergenic | 25.0% |
| !! | TATAGTGAAATAGGCTTTTA+AGG | - | chr1.4:69724891-69724910 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | + | chr1.4:69724811-69724830 | MS.gene20835:intron | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | - | chr1.4:69724830-69724811 | None:intergenic | 25.0% |
| !!! | AAAATCTTTAAAATAGAGGG+AGG | - | chr1.4:69725511-69725530 | None:intergenic | 25.0% |
| !!! | ACAAATTGGTCTTTGAATAT+GGG | + | chr1.4:69726369-69726388 | MS.gene20835:intron | 25.0% |
| !!! | ACTTTAGAATTGCTTTTTCT+AGG | + | chr1.4:69722690-69722709 | MS.gene20835:intron | 25.0% |
| !!! | CTATGTTTTGGAATAATTTG+TGG | + | chr1.4:69723048-69723067 | MS.gene20835:intron | 25.0% |
| !!! | TCGGTTGGTAATATAATATA+CGG | + | chr1.4:69726098-69726117 | MS.gene20835:intron | 25.0% |
| !!! | TGAGTAGTACTATTTTTTGA+TGG | + | chr1.4:69726193-69726212 | MS.gene20835:intron | 25.0% |
| !!! | TTCTACACGTTATTATTTTG+TGG | - | chr1.4:69723991-69724010 | None:intergenic | 25.0% |
| !!! | TTTAAGAAAAGTGCTAAAGT+TGG | - | chr1.4:69722382-69722401 | None:intergenic | 25.0% |
| !!! | TTTAGTAGTTTTATTTGGAG+AGG | - | chr1.4:69724080-69724099 | None:intergenic | 25.0% |
| AAAATGAATAAGAGATCACG+TGG | - | chr1.4:69722771-69722790 | None:intergenic | 30.0% | |
| AACGTGCACAAAATGATAAT+TGG | + | chr1.4:69725220-69725239 | MS.gene20835:intron | 30.0% | |
| AATGCTTGTCTACCATTATA+AGG | + | chr1.4:69724865-69724884 | MS.gene20835:intron | 30.0% | |
| AATTATGTGACGACATCTTA+GGG | + | chr1.4:69726901-69726920 | MS.gene20835:CDS | 30.0% | |
| ACAATAAGACTATGTGCAAT+GGG | - | chr1.4:69723874-69723893 | None:intergenic | 30.0% | |
| ACGTGCACAAAATGATAATT+GGG | + | chr1.4:69725221-69725240 | MS.gene20835:intron | 30.0% | |
| ACGTTTATCAATTCATCAGT+AGG | - | chr1.4:69725205-69725224 | None:intergenic | 30.0% | |
| ATAAGAAATAAAAGGTGGTG+GGG | - | chr1.4:69723240-69723259 | None:intergenic | 30.0% | |
| ATGACATTAATGAAGACAGT+GGG | + | chr1.4:69726940-69726959 | MS.gene20835:CDS | 30.0% | |
| CATTGTAAATGGTCTAATAG+AGG | - | chr1.4:69723088-69723107 | None:intergenic | 30.0% | |
| CGTTTATCAATTCATCAGTA+GGG | - | chr1.4:69725204-69725223 | None:intergenic | 30.0% | |
| CTCTATTAGACCATTTACAA+TGG | + | chr1.4:69723086-69723105 | MS.gene20835:intron | 30.0% | |
| GAAGAAGATAGTGAAAAACT+TGG | + | chr1.4:69723443-69723462 | MS.gene20835:intron | 30.0% | |
| GAATAAGAAATAAAAGGTGG+TGG | - | chr1.4:69723242-69723261 | None:intergenic | 30.0% | |
| GACAAGCATTACAATGAAAT+AGG | - | chr1.4:69724855-69724874 | None:intergenic | 30.0% | |
| GTCATTGTTTCCAATTAAAC+TGG | + | chr1.4:69722948-69722967 | MS.gene20835:intron | 30.0% | |
| TAAGCAAAAATCCACTTTCT+AGG | - | chr1.4:69724801-69724820 | None:intergenic | 30.0% | |
| TAAGTAAATAGGTCAAGCTT+AGG | - | chr1.4:69725068-69725087 | None:intergenic | 30.0% | |
| TAATAAGTAGGCCTGTAAAT+AGG | - | chr1.4:69724624-69724643 | None:intergenic | 30.0% | |
| TACAATAAGACTATGTGCAA+TGG | - | chr1.4:69723875-69723894 | None:intergenic | 30.0% | |
| TATTGAATGAACCTAGAAAG+TGG | + | chr1.4:69724787-69724806 | MS.gene20835:intron | 30.0% | |
| TTAAGAGAGAGAAAATGATG+TGG | - | chr1.4:69723162-69723181 | None:intergenic | 30.0% | |
| TTATTAAAAAGGCTAGGCTT+AGG | - | chr1.4:69725109-69725128 | None:intergenic | 30.0% | |
| TTCAACTTTAATCTCTCCAA+TGG | + | chr1.4:69723193-69723212 | MS.gene20835:intron | 30.0% | |
| ! | ATTTGAGTGACTTGAAGTTT+TGG | - | chr1.4:69725380-69725399 | None:intergenic | 30.0% |
| ! | TTAAGGCCTTATAGTGAAAT+AGG | - | chr1.4:69724900-69724919 | None:intergenic | 30.0% |
| ! | TTTAAAGTGCCCAAAAAAGA+CGG | - | chr1.4:69726236-69726255 | None:intergenic | 30.0% |
| ! | TTTGGGCACTTTAAAAATCA+TGG | + | chr1.4:69726241-69726260 | MS.gene20835:intron | 30.0% |
| !! | AACAGTAGTACTGATGAATA+GGG | + | chr1.4:69724449-69724468 | MS.gene20835:intron | 30.0% |
| !! | AGAGAAAATAATTGATGACG+TGG | + | chr1.4:69726839-69726858 | MS.gene20835:CDS | 30.0% |
| !! | CACAAATTGGTCTTTGAATA+TGG | + | chr1.4:69726368-69726387 | MS.gene20835:intron | 30.0% |
| !! | TAAATTTTGGCATAAAGTGG+TGG | + | chr1.4:69726434-69726453 | MS.gene20835:intron | 30.0% |
| !!! | AGGCTTACAATTTTTTTCGT+AGG | - | chr1.4:69724522-69724541 | None:intergenic | 30.0% |
| !!! | TACAATTTTTTTCGTAGGTC+AGG | - | chr1.4:69724517-69724536 | None:intergenic | 30.0% |
| AAAAATTGTAAGCCTGAGTC+TGG | + | chr1.4:69724527-69724546 | MS.gene20835:intron | 35.0% | |
| AAAAGCCTACGAAACCTAAT+AGG | - | chr1.4:69725038-69725057 | None:intergenic | 35.0% | |
| AACTATAGAGCCAAAGATCA+TGG | + | chr1.4:69726656-69726675 | MS.gene20835:CDS | 35.0% | |
| AAGTACTCATGTCAAGACAA+TGG | + | chr1.4:69726974-69726993 | MS.gene20835:CDS | 35.0% | |
| AAGTCAAGAGAGAGAAATGA+TGG | + | chr1.4:69727037-69727056 | MS.gene20835:CDS | 35.0% | |
| AATAACATGCATAAACAGGC+CGG | + | chr1.4:69725012-69725031 | MS.gene20835:intron | 35.0% | |
| AATAAGACTATGTGCAATGG+GGG | - | chr1.4:69723872-69723891 | None:intergenic | 35.0% | |
| AATGTGGTAAAACAAGTCGT+TGG | + | chr1.4:69726700-69726719 | MS.gene20835:CDS | 35.0% | |
| ACAACTTCACAATCTAGTGA+AGG | - | chr1.4:69726816-69726835 | None:intergenic | 35.0% | |
| ACCTGGCCTGTTTATTAAAA+AGG | - | chr1.4:69725120-69725139 | None:intergenic | 35.0% | |
| AGACATAGGCTAAATATACG+TGG | - | chr1.4:69722441-69722460 | None:intergenic | 35.0% | |
| AGTCAAGAGAGAGAAATGAT+GGG | + | chr1.4:69727038-69727057 | MS.gene20835:CDS | 35.0% | |
| AGTTGAATACTATTGTCAGC+AGG | - | chr1.4:69725417-69725436 | None:intergenic | 35.0% | |
| ATCAATTCATCAGTAGGGTT+GGG | - | chr1.4:69725199-69725218 | None:intergenic | 35.0% | |
| ATGGGGTTAACCATTGTAAA+TGG | - | chr1.4:69723099-69723118 | None:intergenic | 35.0% | |
| ATGTGGTAAAACAAGTCGTT+GGG | + | chr1.4:69726701-69726720 | MS.gene20835:CDS | 35.0% | |
| ATTGACATTGGCACTATACT+TGG | + | chr1.4:69725715-69725734 | MS.gene20835:intron | 35.0% | |
| CAAAACAATAGGCCTATGAA+AGG | - | chr1.4:69724560-69724579 | None:intergenic | 35.0% | |
| CAATAAGACTATGTGCAATG+GGG | - | chr1.4:69723873-69723892 | None:intergenic | 35.0% | |
| CCTGCAAACTATTCTTATAC+TGG | + | chr1.4:69724286-69724305 | MS.gene20835:intron | 35.0% | |
| CGTGCACAAAATGATAATTG+GGG | + | chr1.4:69725222-69725241 | MS.gene20835:intron | 35.0% | |
| CTATTCATCAGTACTACTGT+TGG | - | chr1.4:69724450-69724469 | None:intergenic | 35.0% | |
| GAAAGAACAACCAATGATGA+TGG | + | chr1.4:69727080-69727099 | MS.gene20835:CDS | 35.0% | |
| GAATTATGTGACGACATCTT+AGG | + | chr1.4:69726900-69726919 | MS.gene20835:CDS | 35.0% | |
| GACAATGGAAAATTGTTTGC+TGG | + | chr1.4:69726989-69727008 | MS.gene20835:CDS | 35.0% | |
| GACATAGGCTAAATATACGT+GGG | - | chr1.4:69722440-69722459 | None:intergenic | 35.0% | |
| GATGACATTAATGAAGACAG+TGG | + | chr1.4:69726939-69726958 | MS.gene20835:CDS | 35.0% | |
| GCCTGTTTATTAAAAAGGCT+AGG | - | chr1.4:69725115-69725134 | None:intergenic | 35.0% | |
| GTGTTGGGAATTGAAAAAGT+GGG | - | chr1.4:69723138-69723157 | None:intergenic | 35.0% | |
| TAAATGGTCTAATAGAGGGT+GGG | - | chr1.4:69723083-69723102 | None:intergenic | 35.0% | |
| TATCAATTCATCAGTAGGGT+TGG | - | chr1.4:69725200-69725219 | None:intergenic | 35.0% | |
| TCACACCAAAAAGTTATTCC+TGG | + | chr1.4:69724213-69724232 | MS.gene20835:intron | 35.0% | |
| TGACATTAATGAAGACAGTG+GGG | + | chr1.4:69726941-69726960 | MS.gene20835:CDS | 35.0% | |
| ! | AACTGTAGATTTTTCTGCTG+AGG | - | chr1.4:69726620-69726639 | None:intergenic | 35.0% |
| ! | AATTGTTTGCTGGAAACAAG+TGG | + | chr1.4:69726999-69727018 | MS.gene20835:CDS | 35.0% |
| ! | AGAAAATGATGTGGAGTGTT+GGG | - | chr1.4:69723153-69723172 | None:intergenic | 35.0% |
| ! | AGTGTTGGGAATTGAAAAAG+TGG | - | chr1.4:69723139-69723158 | None:intergenic | 35.0% |
| ! | ATTGGGTTTGTGTGATTTTC+AGG | + | chr1.4:69726526-69726545 | MS.gene20835:intron | 35.0% |
| ! | ATTGTTTGCTGGAAACAAGT+GGG | + | chr1.4:69727000-69727019 | MS.gene20835:CDS | 35.0% |
| ! | CAGATATGTTTCCTCTTTTG+AGG | - | chr1.4:69722254-69722273 | None:intergenic | 35.0% |
| ! | CCAGTATAAGAATAGTTTGC+AGG | - | chr1.4:69724289-69724308 | None:intergenic | 35.0% |
| ! | GAGACTTGGTTCATTTCATT+TGG | - | chr1.4:69723483-69723502 | None:intergenic | 35.0% |
| ! | GTAGCTTTTGTTCTTCTTCA+TGG | - | chr1.4:69726727-69726746 | None:intergenic | 35.0% |
| ! | GTTTTACCACATTTACGCTT+AGG | - | chr1.4:69726693-69726712 | None:intergenic | 35.0% |
| ! | TATCGTACGTACCTATGTTT+TGG | + | chr1.4:69723036-69723055 | MS.gene20835:intron | 35.0% |
| ! | TGGAGAGAGAAGAAGAATTT+TGG | - | chr1.4:69723652-69723671 | None:intergenic | 35.0% |
| ! | TTAAAGTGCCCAAAAAAGAC+GGG | - | chr1.4:69726235-69726254 | None:intergenic | 35.0% |
| ! | TTGGTCTTTGAATATGGGTT+TGG | + | chr1.4:69726374-69726393 | MS.gene20835:intron | 35.0% |
| ! | TTTCTGACATTCGTTTGTTG+AGG | - | chr1.4:69724246-69724265 | None:intergenic | 35.0% |
| !! | ACTTGAAGTTTTGGTGACTT+TGG | - | chr1.4:69725371-69725390 | None:intergenic | 35.0% |
| !! | ATTGAAAAAGTGGGTGTTGA+AGG | - | chr1.4:69723129-69723148 | None:intergenic | 35.0% |
| !! | CAACAGTAGTACTGATGAAT+AGG | + | chr1.4:69724448-69724467 | MS.gene20835:intron | 35.0% |
| !! | GAAAATAATTGATGACGTGG+AGG | + | chr1.4:69726842-69726861 | MS.gene20835:CDS | 35.0% |
| !! | GCCTAGCCTTTTTAATAAAC+AGG | + | chr1.4:69725111-69725130 | MS.gene20835:intron | 35.0% |
| !! | TACTACTGTTGGCCTTTATT+AGG | - | chr1.4:69724439-69724458 | None:intergenic | 35.0% |
| !! | TAGTACTGATGAATAGGGTT+GGG | + | chr1.4:69724454-69724473 | MS.gene20835:intron | 35.0% |
| !! | TTGAAAAAGTGGGTGTTGAA+GGG | - | chr1.4:69723128-69723147 | None:intergenic | 35.0% |
| !!! | AGGCTTTTAAGGCCTTATAA+TGG | - | chr1.4:69724880-69724899 | None:intergenic | 35.0% |
| !!! | TTGCTTTTTCTAGGTTCTAC+TGG | + | chr1.4:69722699-69722718 | MS.gene20835:intron | 35.0% |
| AACATAGGTACGTACGATAC+TGG | - | chr1.4:69723035-69723054 | None:intergenic | 40.0% | |
| AATAGGCTAAATACACCCTC+CGG | + | chr1.4:69724680-69724699 | MS.gene20835:intron | 40.0% | |
| ACCTGTTACCATAAGTAGTG+TGG | - | chr1.4:69722305-69722324 | None:intergenic | 40.0% | |
| AGCACATTAAACACTCCCAT+TGG | + | chr1.4:69723813-69723832 | MS.gene20835:intron | 40.0% | |
| AGGAAACATATCTGCTCAAG+AGG | + | chr1.4:69722260-69722279 | MS.gene20835:CDS | 40.0% | |
| ATAGGCCTATGAAAGGCTAT+AGG | - | chr1.4:69724553-69724572 | None:intergenic | 40.0% | |
| ATTTCATTGTCCGTTCTTCC+TGG | - | chr1.4:69726576-69726595 | None:intergenic | 40.0% | |
| CAAATTTGAGAGTTGACCGT+AGG | + | chr1.4:69722531-69722550 | MS.gene20835:intron | 40.0% | |
| CACCAAATTGTTAGGCATGT+GGG | - | chr1.4:69726286-69726305 | None:intergenic | 40.0% | |
| GACACATGTAGCTACTTGAT+TGG | - | chr1.4:69723619-69723638 | None:intergenic | 40.0% | |
| GACATTCAACAAGCAAAACC+AGG | - | chr1.4:69723839-69723858 | None:intergenic | 40.0% | |
| GAGAAAATGATGTGGAGTGT+TGG | - | chr1.4:69723154-69723173 | None:intergenic | 40.0% | |
| GCCTGACATATCTAAAAGTC+TGG | + | chr1.4:69724585-69724604 | MS.gene20835:intron | 40.0% | |
| GGAAGAGTTGTAGACTAAGA+TGG | + | chr1.4:69722208-69722227 | MS.gene20835:CDS | 40.0% | |
| GTAAATGGTCTAATAGAGGG+TGG | - | chr1.4:69723084-69723103 | None:intergenic | 40.0% | |
| GTACGTGGAATTTGAACTTC+TGG | - | chr1.4:69726792-69726811 | None:intergenic | 40.0% | |
| GTAGTTACGTTAGCATAGCT+CGG | + | chr1.4:69726079-69726098 | MS.gene20835:intron | 40.0% | |
| TAGATCGAAACAAGACCACT+AGG | - | chr1.4:69725257-69725276 | None:intergenic | 40.0% | |
| TAGCCTGAAAGCCTATTTAC+AGG | + | chr1.4:69724610-69724629 | MS.gene20835:intron | 40.0% | |
| TCACCAAATTGTTAGGCATG+TGG | - | chr1.4:69726287-69726306 | None:intergenic | 40.0% | |
| TCCACACTACTTATGGTAAC+AGG | + | chr1.4:69722301-69722320 | MS.gene20835:CDS | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | + | chr1.4:69724815-69724834 | MS.gene20835:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | - | chr1.4:69724834-69724815 | None:intergenic | 40.0% | |
| TGTAAATAGGCTTTCAGGCT+AGG | - | chr1.4:69724611-69724630 | None:intergenic | 40.0% | |
| TTACCACATTTACGCTTAGG+AGG | - | chr1.4:69726690-69726709 | None:intergenic | 40.0% | |
| TTGAGAACTGACCTCAAAAG+AGG | + | chr1.4:69722240-69722259 | MS.gene20835:CDS | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr1.4:69724814-69724833 | MS.gene20835:intron | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | - | chr1.4:69724833-69724814 | None:intergenic | 40.0% | |
| TTGGGGTATATTTGTCCTAG+TGG | + | chr1.4:69725239-69725258 | MS.gene20835:intron | 40.0% | |
| TTTGCCACACTCTCCAATTT+CGG | + | chr1.4:69723703-69723722 | MS.gene20835:intron | 40.0% | |
| TTTGGCATAAAGTGGTGGTA+CGG | + | chr1.4:69726439-69726458 | MS.gene20835:intron | 40.0% | |
| ! | ACTTTTAGATATGTCAGGCC+AGG | - | chr1.4:69724584-69724603 | None:intergenic | 40.0% |
| ! | CGGATCCAGGAATAACTTTT+TGG | - | chr1.4:69724221-69724240 | None:intergenic | 40.0% |
| ! | GCCAGACTTTTAGATATGTC+AGG | - | chr1.4:69724589-69724608 | None:intergenic | 40.0% |
| ! | GCCTTTTTAATAAACAGGCC+AGG | + | chr1.4:69725116-69725135 | MS.gene20835:intron | 40.0% |
| ! | TAAAGTGCCCAAAAAAGACG+GGG | - | chr1.4:69726234-69726253 | None:intergenic | 40.0% |
| !! | CTAATAGAGGGTGGGTTTTA+GGG | - | chr1.4:69723075-69723094 | None:intergenic | 40.0% |
| !! | GTAGTACTGATGAATAGGGT+TGG | + | chr1.4:69724453-69724472 | MS.gene20835:intron | 40.0% |
| !! | TAACCAGTTATTTCTGCTGC+CGG | + | chr1.4:69724397-69724416 | MS.gene20835:intron | 40.0% |
| !! | TCTAATAGAGGGTGGGTTTT+AGG | - | chr1.4:69723076-69723095 | None:intergenic | 40.0% |
| !!! | AAAGTTGTCCCCGTCTTTTT+TGG | + | chr1.4:69726223-69726242 | MS.gene20835:intron | 40.0% |
| !!! | AAGTTGTCCCCGTCTTTTTT+GGG | + | chr1.4:69726224-69726243 | MS.gene20835:intron | 40.0% |
| !!! | ATAGGCCTATTGTTTTGACC+TGG | + | chr1.4:69724563-69724582 | MS.gene20835:intron | 40.0% |
| !!! | TTTTTTTCGTAGGTCAGGCT+CGG | - | chr1.4:69724512-69724531 | None:intergenic | 40.0% |
| AACAAGCAAAACCAGGCCAA+TGG | - | chr1.4:69723832-69723851 | None:intergenic | 45.0% | |
| AAGCATGACATGGATGAGAG+AGG | - | chr1.4:69723791-69723810 | None:intergenic | 45.0% | |
| AATAGGGTTGGGAATATGCC+AGG | + | chr1.4:69724465-69724484 | MS.gene20835:intron | 45.0% | |
| AATCCGGCAGCAGAAATAAC+TGG | - | chr1.4:69724403-69724422 | None:intergenic | 45.0% | |
| AATGTGCTGCAAGCATGACA+TGG | - | chr1.4:69723801-69723820 | None:intergenic | 45.0% | |
| ACAAGCAAAACCAGGCCAAT+GGG | - | chr1.4:69723831-69723850 | None:intergenic | 45.0% | |
| ACTATTGTCAGCAGGACGAA+TGG | - | chr1.4:69725409-69725428 | None:intergenic | 45.0% | |
| AGGCCTGTAAATAGGCTTTC+AGG | - | chr1.4:69724616-69724635 | None:intergenic | 45.0% | |
| AGTAGTGTGGAGCTTCACAA+TGG | - | chr1.4:69722292-69722311 | None:intergenic | 45.0% | |
| ATTAAACACTCCCATTGGCC+TGG | + | chr1.4:69723818-69723837 | MS.gene20835:intron | 45.0% | |
| CTATTGTCAGCAGGACGAAT+GGG | - | chr1.4:69725408-69725427 | None:intergenic | 45.0% | |
| GCTTAAACAAGCCAGATCGT+AGG | + | chr1.4:69725148-69725167 | MS.gene20835:intron | 45.0% | |
| GGACGAACATCCATGATCTT+TGG | - | chr1.4:69726669-69726688 | None:intergenic | 45.0% | |
| GGTTAAAAGTGAGAGCTTGC+CGG | + | chr1.4:69722828-69722847 | MS.gene20835:intron | 45.0% | |
| GTGAAGCTCCACACTACTTA+TGG | + | chr1.4:69722294-69722313 | MS.gene20835:CDS | 45.0% | |
| TCAGGCCAGGTCAAAACAAT+AGG | - | chr1.4:69724571-69724590 | None:intergenic | 45.0% | |
| TCATCAGTAGGGTTGGGAAT+AGG | - | chr1.4:69725193-69725212 | None:intergenic | 45.0% | |
| TCTGGCCTATAGCCTTTCAT+AGG | + | chr1.4:69724545-69724564 | MS.gene20835:intron | 45.0% | |
| TGCCCACATGCCTAACAATT+TGG | + | chr1.4:69726281-69726300 | MS.gene20835:intron | 45.0% | |
| TGCTGAGGTGAGAATTCCAA+TGG | - | chr1.4:69726605-69726624 | None:intergenic | 45.0% | |
| TTACGTTAGCATAGCTCGGT+TGG | + | chr1.4:69726083-69726102 | MS.gene20835:intron | 45.0% | |
| ! | ATTGGAGAGTGTGGCAAACA+AGG | - | chr1.4:69723701-69723720 | None:intergenic | 45.0% |
| ! | CAATCTAGTGAAGGAGTACG+TGG | - | chr1.4:69726807-69726826 | None:intergenic | 45.0% |
| ! | CCACGCATTTTGCAAGTGAT+GGG | - | chr1.4:69722893-69722912 | None:intergenic | 45.0% |
| ! | CGTTCTAAGTGGTCCGAAAT+TGG | - | chr1.4:69723719-69723738 | None:intergenic | 45.0% |
| ! | GACATTCGTTTGTTGAGGAG+CGG | - | chr1.4:69724241-69724260 | None:intergenic | 45.0% |
| !! | AGAGAAATGATGGGTGATGG+AGG | + | chr1.4:69727047-69727066 | MS.gene20835:CDS | 45.0% |
| !! | GAGAGAGAAATGATGGGTGA+TGG | + | chr1.4:69727044-69727063 | MS.gene20835:CDS | 45.0% |
| !! | GGGTTTGTGTGATTTTCAGG+TGG | + | chr1.4:69726529-69726548 | MS.gene20835:intron | 45.0% |
| !! | GGTGTTGAAGGGTGTTGAAT+GGG | - | chr1.4:69723117-69723136 | None:intergenic | 45.0% |
| !! | GTGTTGAAGGGTGTTGAATG+GGG | - | chr1.4:69723116-69723135 | None:intergenic | 45.0% |
| !!! | TTTTTTCGTAGGTCAGGCTC+GGG | - | chr1.4:69724511-69724530 | None:intergenic | 45.0% |
| !! | AAATATATATTAATTATCAA+TGG | + | chr1.4:69725642-69725661 | MS.gene20835:intron | 5.0% |
| !!! | TAATATAATCTTTTTTTTTT+TGG | + | chr1.4:69724118-69724137 | MS.gene20835:intron | 5.0% |
| AAAGGCTATAGGCCAGACTC+AGG | - | chr1.4:69724542-69724561 | None:intergenic | 50.0% | |
| AACAGCTTCCCCGTAGTATC+CGG | - | chr1.4:69722850-69722869 | None:intergenic | 50.0% | |
| ACCACTTAGAACGTGACACG+TGG | + | chr1.4:69723726-69723745 | MS.gene20835:intron | 50.0% | |
| AGGTCAGGCCAGACTTTGAT+AGG | + | chr1.4:69724485-69724504 | MS.gene20835:intron | 50.0% | |
| ATGATAGCTAGCCACTTGCC+AGG | + | chr1.4:69726555-69726574 | MS.gene20835:CDS | 50.0% | |
| CATAAACAGGCCGGCCTATT+AGG | + | chr1.4:69725021-69725040 | MS.gene20835:intron | 50.0% | |
| CATGCCATACCCACATCCTA+CGG | - | chr1.4:69722550-69722569 | None:intergenic | 50.0% | |
| CCCATCACTTGCAAAATGCG+TGG | + | chr1.4:69722890-69722909 | MS.gene20835:intron | 50.0% | |
| CGTCCTCCTAAGCGTAAATG+TGG | + | chr1.4:69726684-69726703 | MS.gene20835:CDS | 50.0% | |
| GAACGTGACACGTGGCATAT+CGG | + | chr1.4:69723734-69723753 | MS.gene20835:intron | 50.0% | |
| GAGAGTTGACCGTAGGATGT+GGG | + | chr1.4:69722538-69722557 | MS.gene20835:intron | 50.0% | |
| GCCTACGAAACCTAATAGGC+CGG | - | chr1.4:69725034-69725053 | None:intergenic | 50.0% | |
| TAGCCACTTGCCAGGAAGAA+CGG | + | chr1.4:69726563-69726582 | MS.gene20835:CDS | 50.0% | |
| TATCAAAGTCTGGCCTGACC+TGG | - | chr1.4:69724486-69724505 | None:intergenic | 50.0% | |
| TGAGAGCTTGCCGGATACTA+CGG | + | chr1.4:69722837-69722856 | MS.gene20835:intron | 50.0% | |
| TGAGAGTTGACCGTAGGATG+TGG | + | chr1.4:69722537-69722556 | MS.gene20835:intron | 50.0% | |
| TGGTCCGAAATTGGAGAGTG+TGG | - | chr1.4:69723710-69723729 | None:intergenic | 50.0% | |
| TGTTTAAGCCTGGTCTGACC+TGG | - | chr1.4:69725137-69725156 | None:intergenic | 50.0% | |
| TTGACCGTAGGATGTGGGTA+TGG | + | chr1.4:69722543-69722562 | MS.gene20835:intron | 50.0% | |
| ! | GCCACGCATTTTGCAAGTGA+TGG | - | chr1.4:69722894-69722913 | None:intergenic | 50.0% |
| ! | TATTAGTGACCGGAGGGTGT+AGG | + | chr1.4:69724821-69724840 | MS.gene20835:intron | 50.0% |
| ! | TGGCAAGTGGCTAGCTATCA+TGG | - | chr1.4:69726556-69726575 | None:intergenic | 50.0% |
| !! | CGATCTGGCTTGTTTAAGCC+TGG | - | chr1.4:69725147-69725166 | None:intergenic | 50.0% |
| !! | GCTTTAAAGCCTACACCCTC+CGG | - | chr1.4:69724833-69724852 | None:intergenic | 50.0% |
| !! | GGGTGTTGAAGGGTGTTGAA+TGG | - | chr1.4:69723118-69723137 | None:intergenic | 50.0% |
| AGAGCTTGCCGGATACTACG+GGG | + | chr1.4:69722839-69722858 | MS.gene20835:intron | 55.0% | |
| CGTAGGATGTGGGTATGGCA+TGG | + | chr1.4:69722548-69722567 | MS.gene20835:intron | 55.0% | |
| GAGAGCTTGCCGGATACTAC+GGG | + | chr1.4:69722838-69722857 | MS.gene20835:intron | 55.0% | |
| GCCGGCCTATTAGGTTTCGT+AGG | + | chr1.4:69725030-69725049 | MS.gene20835:intron | 55.0% | |
| GGTTGGGAATATGCCAGGTC+AGG | + | chr1.4:69724470-69724489 | MS.gene20835:intron | 55.0% | |
| TAAACAGGCCAGGTCAGACC+AGG | + | chr1.4:69725126-69725145 | MS.gene20835:intron | 55.0% | |
| TGTCCGTTCTTCCTGGCAAG+TGG | - | chr1.4:69726569-69726588 | None:intergenic | 55.0% | |
| ! | GCCACGTGTCACGTTCTAAG+TGG | - | chr1.4:69723730-69723749 | None:intergenic | 55.0% |
| ! | GTTTGTTGAGGAGCGGATCC+AGG | - | chr1.4:69724234-69724253 | None:intergenic | 55.0% |
| AACAAGGAGACAGCGCGCGT+TGG | - | chr1.4:69723685-69723704 | None:intergenic | 60.0% | |
| AATAGGCCAGACCGGCCTAC+AGG | - | chr1.4:69725176-69725195 | None:intergenic | 60.0% | |
| ACAGCGCGCGTTGGAAACAG+AGG | - | chr1.4:69723676-69723695 | None:intergenic | 60.0% | |
| ATAGGCCAGACCGGCCTACA+GGG | - | chr1.4:69725175-69725194 | None:intergenic | 60.0% | |
| CGCGCGTTGGAAACAGAGGA+TGG | - | chr1.4:69723672-69723691 | None:intergenic | 60.0% | |
| GGCTCGGGCCTATCAAAGTC+TGG | - | chr1.4:69724496-69724515 | None:intergenic | 60.0% | |
| GGGTTGGGAATAGGCCAGAC+CGG | - | chr1.4:69725184-69725203 | None:intergenic | 60.0% | |
| GATCGTAGGCCCCTGTAGGC+CGG | + | chr1.4:69725162-69725181 | MS.gene20835:intron | 65.0% | |
| GCCAGATCGTAGGCCCCTGT+AGG | + | chr1.4:69725158-69725177 | MS.gene20835:intron | 65.0% | |
| GCCTACAGGGGCCTACGATC+TGG | - | chr1.4:69725162-69725181 | None:intergenic | 65.0% | |
| TAGGCCAGACCGGCCTACAG+GGG | - | chr1.4:69725174-69725193 | None:intergenic | 65.0% | |
| TAGGCCCCTGTAGGCCGGTC+TGG | + | chr1.4:69725167-69725186 | MS.gene20835:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 69722193 | 69727107 | 69722193 | ID=MS.gene20835 |
| chr1.4 | mRNA | 69722193 | 69727107 | 69722193 | ID=MS.gene20835.t1;Parent=MS.gene20835 |
| chr1.4 | exon | 69722193 | 69722322 | 69722193 | ID=MS.gene20835.t1.exon1;Parent=MS.gene20835.t1 |
| chr1.4 | CDS | 69722193 | 69722322 | 69722193 | ID=cds.MS.gene20835.t1;Parent=MS.gene20835.t1 |
| chr1.4 | exon | 69726548 | 69727107 | 69726548 | ID=MS.gene20835.t1.exon2;Parent=MS.gene20835.t1 |
| chr1.4 | CDS | 69726548 | 69727107 | 69726548 | ID=cds.MS.gene20835.t1;Parent=MS.gene20835.t1 |
| Gene Sequence |
| Protein sequence |
