Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061085.t1 | XP_013466739.1 | 93.2 | 308 | 19 | 1 | 1 | 308 | 1 | 306 | 8.90E-145 | 523.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061085.t1 | A0A072VRN1 | 93.2 | 308 | 19 | 1 | 1 | 308 | 1 | 306 | 6.4e-145 | 523.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene061085.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050226 | MS.gene061085 | 0.802049 | 6.75E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene061085 | 0.806407 | 8.35E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene061085 | 0.804699 | 1.91E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene061085 | 0.811018 | 8.63E-51 | -1.69E-46 |
| MS.gene061085 | MS.gene062429 | 0.804251 | 2.36E-49 | -1.69E-46 |
| MS.gene061085 | MS.gene072082 | 0.804793 | 1.82E-49 | -1.69E-46 |
| MS.gene061085 | MS.gene09136 | 0.803068 | 4.16E-49 | -1.69E-46 |
| MS.gene061085 | MS.gene20835 | 0.813419 | 2.58E-51 | -1.69E-46 |
| MS.gene061085 | MS.gene24247 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene061085 | MS.gene28498 | 0.813543 | 2.43E-51 | -1.69E-46 |
| MS.gene061085 | MS.gene31519 | 0.812913 | 3.34E-51 | -1.69E-46 |
| MS.gene061085 | MS.gene39496 | 0.808365 | 3.21E-50 | -1.69E-46 |
| MS.gene061085 | MS.gene56057 | 0.813001 | 3.19E-51 | -1.69E-46 |
| MS.gene061085 | MS.gene60204 | 0.800056 | 1.72E-48 | -1.69E-46 |
| MS.gene061085 | MS.gene63507 | 0.81917 | 1.34E-52 | -1.69E-46 |
| MS.gene061085 | MS.gene64621 | 0.80682 | 6.83E-50 | -1.69E-46 |
| MS.gene061085 | MS.gene68764 | 0.813003 | 3.19E-51 | -1.69E-46 |
| MS.gene061085 | MS.gene68819 | 0.808832 | 2.55E-50 | -1.69E-46 |
| MS.gene061085 | MS.gene69575 | 0.800159 | 1.64E-48 | -1.69E-46 |
| MS.gene061085 | MS.gene70021 | 0.809248 | 2.08E-50 | -1.69E-46 |
| MS.gene061085 | MS.gene73226 | 0.80793 | 3.97E-50 | -1.69E-46 |
| MS.gene061085 | MS.gene76356 | 0.803724 | 3.04E-49 | -1.69E-46 |
| MS.gene061085 | MS.gene79290 | 0.810707 | 1.01E-50 | -1.69E-46 |
| MS.gene061085 | MS.gene82533 | 0.809513 | 1.82E-50 | -1.69E-46 |
| MS.gene061085 | MS.gene86055 | 0.801378 | 9.26E-49 | -1.69E-46 |
| MS.gene061085 | MS.gene87170 | 0.80125 | 9.84E-49 | -1.69E-46 |
| MS.gene061085 | MS.gene92548 | 0.814053 | 1.87E-51 | -1.69E-46 |
| MS.gene061085 | MS.gene92763 | 0.800509 | 1.39E-48 | -1.69E-46 |
| MS.gene061085 | MS.gene93385 | 0.806685 | 7.30E-50 | -1.69E-46 |
| MS.gene061085 | MS.gene99540 | 0.803382 | 3.58E-49 | -1.69E-46 |
| MS.gene061085 | MS.gene99675 | 0.813456 | 2.54E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061085.t1 | MTR_1g034500 | 92.880 | 309 | 20 | 1 | 1 | 309 | 1 | 307 | 0.0 | 598 |
| MS.gene061085.t1 | MTR_2g045670 | 64.309 | 311 | 60 | 8 | 1 | 309 | 20 | 281 | 6.64e-125 | 358 |
| MS.gene061085.t1 | MTR_2g045700 | 64.309 | 311 | 69 | 9 | 1 | 309 | 1 | 271 | 6.27e-121 | 348 |
| MS.gene061085.t1 | MTR_2g045630 | 65.726 | 248 | 58 | 7 | 76 | 308 | 42 | 277 | 3.05e-97 | 288 |
| MS.gene061085.t1 | MTR_8g077950 | 48.837 | 86 | 42 | 1 | 220 | 303 | 252 | 337 | 2.47e-20 | 90.1 |
| MS.gene061085.t1 | MTR_8g077950 | 48.837 | 86 | 42 | 1 | 220 | 303 | 254 | 339 | 2.51e-20 | 90.1 |
| MS.gene061085.t1 | MTR_8g077950 | 48.837 | 86 | 42 | 1 | 220 | 303 | 194 | 279 | 2.54e-20 | 89.0 |
| MS.gene061085.t1 | MTR_5g028850 | 35.354 | 99 | 60 | 1 | 198 | 296 | 286 | 380 | 4.54e-12 | 66.6 |
| MS.gene061085.t1 | MTR_5g028850 | 35.354 | 99 | 60 | 1 | 198 | 296 | 284 | 378 | 5.42e-12 | 66.2 |
| MS.gene061085.t1 | MTR_8g070820 | 24.204 | 314 | 188 | 10 | 6 | 291 | 57 | 348 | 1.07e-11 | 65.5 |
| MS.gene061085.t1 | MTR_8g070820 | 36.709 | 79 | 50 | 0 | 213 | 291 | 296 | 374 | 4.33e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061085.t1 | AT4G36730 | 25.329 | 304 | 202 | 6 | 12 | 303 | 9 | 299 | 5.61e-23 | 97.1 |
| MS.gene061085.t1 | AT4G36730 | 25.974 | 308 | 197 | 8 | 12 | 303 | 9 | 301 | 4.54e-22 | 94.7 |
| MS.gene061085.t1 | AT2G35530 | 41.176 | 68 | 40 | 0 | 224 | 291 | 305 | 372 | 1.19e-12 | 68.6 |
Find 60 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACTATGTGGGGTTTAT+TGG | 0.126290 | 1.4:-19140518 | None:intergenic |
| TCTGGTCTGGCTCAGAATTT+AGG | 0.161997 | 1.4:+19141500 | MS.gene061085:CDS |
| GAAATGGTACACAGAAATTT+TGG | 0.193208 | 1.4:+19140818 | MS.gene061085:CDS |
| GATTTATGCTTCTTAGTTAA+AGG | 0.201185 | 1.4:-19141299 | None:intergenic |
| ACTGGGGAATCAAGAGAATT+TGG | 0.246551 | 1.4:+19140899 | MS.gene061085:CDS |
| TCCCCAGTCATTAAACTTAC+AGG | 0.268465 | 1.4:-19140884 | None:intergenic |
| ATCTCCCTCTGGTGATCTCT+TGG | 0.312142 | 1.4:-19141063 | None:intergenic |
| TGTGGTAACATAGGTTTGTT+TGG | 0.349768 | 1.4:-19140107 | None:intergenic |
| CTGGTCTGGCTCAGAATTTA+GGG | 0.370245 | 1.4:+19141501 | MS.gene061085:CDS |
| GAAGAGCTAGTTAAGAAGTA+TGG | 0.383568 | 1.4:+19145707 | MS.gene061085:CDS |
| AATAGATCTGCAATTGATTC+TGG | 0.403345 | 1.4:-19145731 | None:intergenic |
| AAACAGGCTTATTACAATCC+TGG | 0.410680 | 1.4:+19140258 | MS.gene061085:intron |
| TCAGTACATCTTGCAAAATC+AGG | 0.425666 | 1.4:+19140338 | MS.gene061085:CDS |
| AAGATCAAAGATAAAGAAAC+AGG | 0.437513 | 1.4:+19142722 | MS.gene061085:CDS |
| AAGGAAGAATCCACTCCGTT+TGG | 0.441874 | 1.4:+19139939 | MS.gene061085:CDS |
| TTCCTTGTAGAAAATCCATC+TGG | 0.463105 | 1.4:+19141482 | MS.gene061085:intron |
| TAAGCTTTCTGAGGAATGTC+TGG | 0.463695 | 1.4:+19143839 | MS.gene061085:CDS |
| TGGAAGACCTTACAATTTCA+CGG | 0.479597 | 1.4:+19139959 | MS.gene061085:CDS |
| TGTAGAAAATCCATCTGGTC+TGG | 0.486514 | 1.4:+19141487 | MS.gene061085:intron |
| TAATAAGATAGACACTCTTA+AGG | 0.488014 | 1.4:+19143785 | MS.gene061085:CDS |
| GCTTAGCAAGCGTTTGTGCT+AGG | 0.489007 | 1.4:-19143821 | None:intergenic |
| GTTAAAATGATGGACCTCAA+TGG | 0.494777 | 1.4:-19143883 | None:intergenic |
| AACAGGCTTATTACAATCCT+GGG | 0.495397 | 1.4:+19140259 | MS.gene061085:intron |
| TGAGGCACCGTGAAATTGTA+AGG | 0.513205 | 1.4:-19139966 | None:intergenic |
| GGTTTATTGGACAGCCTCAC+GGG | 0.515395 | 1.4:-19140505 | None:intergenic |
| CAACCTGTAAGTTTAATGAC+TGG | 0.518291 | 1.4:+19140881 | MS.gene061085:CDS |
| AACCTGTAAGTTTAATGACT+GGG | 0.521729 | 1.4:+19140882 | MS.gene061085:CDS |
| GGGTTTATTGGACAGCCTCA+CGG | 0.528698 | 1.4:-19140506 | None:intergenic |
| CTTCAACGTGATGCTCTACA+TGG | 0.529457 | 1.4:+19140481 | MS.gene061085:CDS |
| ATGTACTGATGATACAAGTA+AGG | 0.542138 | 1.4:-19140324 | None:intergenic |
| AAATTCTGAGCCAGACCAGA+TGG | 0.553977 | 1.4:-19141497 | None:intergenic |
| ACATTGGACTACAGCTATGC+AGG | 0.556528 | 1.4:+19140127 | MS.gene061085:CDS |
| GAACAAATTGTACCTCATTG+AGG | 0.556643 | 1.4:-19140960 | None:intergenic |
| GGCTCACCTCAACAACTATG+TGG | 0.564253 | 1.4:-19140528 | None:intergenic |
| AAGGAGCAGCTGCAAGTGGA+TGG | 0.564358 | 1.4:-19140305 | None:intergenic |
| GTAGTCCAATGTGGTAACAT+AGG | 0.564454 | 1.4:-19140116 | None:intergenic |
| TCTAACATGATTACTGCGGA+TGG | 0.576063 | 1.4:+19141320 | MS.gene061085:CDS |
| GCTCACCTCAACAACTATGT+GGG | 0.580762 | 1.4:-19140527 | None:intergenic |
| AAATTGTAAGGTCTTCCAAA+CGG | 0.581928 | 1.4:-19139954 | None:intergenic |
| TGGAACCAAGAGATCACCAG+AGG | 0.585877 | 1.4:+19141058 | MS.gene061085:CDS |
| AAGTAAGGAGCAGCTGCAAG+TGG | 0.592524 | 1.4:-19140309 | None:intergenic |
| TTTCTCGATCTTGATGGGGA+AGG | 0.594200 | 1.4:+19139920 | None:intergenic |
| TAAACCCCACATAGTTGTTG+AGG | 0.602835 | 1.4:+19140522 | MS.gene061085:CDS |
| ACAAACCTATGTTACCACAT+TGG | 0.603220 | 1.4:+19140111 | MS.gene061085:CDS |
| AACGCTTGCTAAGCTTTCTG+AGG | 0.605311 | 1.4:+19143830 | MS.gene061085:CDS |
| AAAGTATTTGGAGTAGACCC+AGG | 0.610691 | 1.4:-19140276 | None:intergenic |
| CACCACAAAGAGTTTCAAGT+AGG | 0.611543 | 1.4:-19145764 | None:intergenic |
| CAATGAAAATGATTCCATTG+AGG | 0.612331 | 1.4:+19143869 | MS.gene061085:CDS |
| AACATCAACGTCAACAACGT+CGG | 0.620687 | 1.4:-19141546 | None:intergenic |
| GAATTTAGGGACAGTCGTCA+AGG | 0.625189 | 1.4:+19141514 | MS.gene061085:CDS |
| ACCTGTAAGTTTAATGACTG+GGG | 0.644193 | 1.4:+19140883 | MS.gene061085:CDS |
| GGAACCAAGAGATCACCAGA+GGG | 0.650508 | 1.4:+19141059 | MS.gene061085:CDS |
| CTCACCTCAACAACTATGTG+GGG | 0.660296 | 1.4:-19140526 | None:intergenic |
| GATTTACTGACATCATCTTG+AGG | 0.660566 | 1.4:-19139984 | None:intergenic |
| TGTGTGCGCAGTGCAGCAAG+TGG | 0.664216 | 1.4:+19141038 | MS.gene061085:intron |
| GTAAGGTCTTCCAAACGGAG+TGG | 0.675114 | 1.4:-19139949 | None:intergenic |
| TAAATCTAACATGATTACTG+CGG | 0.677606 | 1.4:+19141316 | MS.gene061085:CDS |
| ATGCTCTACATGGTCCCGTG+AGG | 0.706895 | 1.4:+19140491 | MS.gene061085:CDS |
| ACAGGGATGGAACCTCAATG+AGG | 0.714168 | 1.4:+19140948 | MS.gene061085:CDS |
| TGCATAGCTGTAGTCCAATG+TGG | 0.721179 | 1.4:-19140125 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAAACTAAAAAACT+AGG | + | chr1.4:19144038-19144057 | MS.gene061085:intron | 10.0% |
| !! | TAATTTATTTATGATACTAT+TGG | - | chr1.4:19145140-19145159 | None:intergenic | 10.0% |
| !! | TATTAAATAAAATTAGAGTA+CGG | - | chr1.4:19142953-19142972 | None:intergenic | 10.0% |
| !! | TTTATTATAAGATAATCAAA+AGG | - | chr1.4:19141362-19141381 | None:intergenic | 10.0% |
| !!! | TAATTTTTCATATAAATATG+TGG | + | chr1.4:19141118-19141137 | MS.gene061085:intron | 10.0% |
| !! | AAAATGTAAAAAGAAAATGA+TGG | + | chr1.4:19142871-19142890 | MS.gene061085:intron | 15.0% |
| !! | ATACTTTCGTAATTAATAAA+AGG | + | chr1.4:19144063-19144082 | MS.gene061085:intron | 15.0% |
| !! | ATATATATATTGAAAGGTTT+AGG | - | chr1.4:19140552-19140571 | None:intergenic | 15.0% |
| !! | ATTTAATAAAATAGAAGTGA+TGG | + | chr1.4:19142061-19142080 | MS.gene061085:intron | 15.0% |
| !! | CAATGAATATATATATTGAA+AGG | - | chr1.4:19140558-19140577 | None:intergenic | 15.0% |
| !! | GAAAAAAAAAAACTTAGAAT+GGG | - | chr1.4:19145412-19145431 | None:intergenic | 15.0% |
| !! | TTAAAATTATTCTTTAGTAC+AGG | + | chr1.4:19141219-19141238 | MS.gene061085:intron | 15.0% |
| !! | TTCTTTAATGAATACTAAAA+CGG | - | chr1.4:19144731-19144750 | None:intergenic | 15.0% |
| !! | TTGTAATAAACTTTCTAATT+AGG | + | chr1.4:19145494-19145513 | MS.gene061085:intron | 15.0% |
| !!! | ATAATTTTTTATTCAGACTT+GGG | - | chr1.4:19141019-19141038 | None:intergenic | 15.0% |
| !!! | GAAATTTTCATATTTCTTTA+GGG | + | chr1.4:19140647-19140666 | MS.gene061085:intron | 15.0% |
| !!! | TCTTATTTTAAATTTCAAAC+AGG | + | chr1.4:19140242-19140261 | MS.gene061085:intron | 15.0% |
| !!! | TGAAATTTTCATATTTCTTT+AGG | + | chr1.4:19140646-19140665 | MS.gene061085:intron | 15.0% |
| !!! | TTTTATAAATTATGTAATCC+AGG | - | chr1.4:19143684-19143703 | None:intergenic | 15.0% |
| !! | AAATGTCAAGTAGAAAAAAT+AGG | - | chr1.4:19143052-19143071 | None:intergenic | 20.0% |
| !! | AAGAAATGAGTAGTTTATTA+AGG | + | chr1.4:19141194-19141213 | MS.gene061085:intron | 20.0% |
| !! | AAGGAACTTATATAAGTAAA+AGG | + | chr1.4:19144823-19144842 | MS.gene061085:intron | 20.0% |
| !! | AATGTATATAAATTCGACAA+TGG | + | chr1.4:19142831-19142850 | MS.gene061085:intron | 20.0% |
| !! | ATAAAACTCAACAAATAAAG+AGG | - | chr1.4:19143912-19143931 | None:intergenic | 20.0% |
| !! | ATGATGTCTATAAATAACAA+GGG | - | chr1.4:19144313-19144332 | None:intergenic | 20.0% |
| !! | ATGTATATAAATTCGACAAT+GGG | + | chr1.4:19142832-19142851 | MS.gene061085:intron | 20.0% |
| !! | GGAAAAAAAAAAACTTAGAA+TGG | - | chr1.4:19145413-19145432 | None:intergenic | 20.0% |
| !! | GTAACATAGATTTAGAAAAA+TGG | + | chr1.4:19142172-19142191 | MS.gene061085:intron | 20.0% |
| !! | TAAAACTCAACAAATAAAGA+GGG | - | chr1.4:19143911-19143930 | None:intergenic | 20.0% |
| !! | TACATGATTATGATTATACA+TGG | + | chr1.4:19143446-19143465 | MS.gene061085:intron | 20.0% |
| !! | TATATCATCTCAAAATCTTA+AGG | + | chr1.4:19144181-19144200 | MS.gene061085:intron | 20.0% |
| !! | TCTTTAATGAATACTAAAAC+GGG | - | chr1.4:19144730-19144749 | None:intergenic | 20.0% |
| !! | TGTTATGTGCTTTAATAAAT+AGG | - | chr1.4:19143181-19143200 | None:intergenic | 20.0% |
| !! | TTATTTATGATACTATTGGA+GGG | - | chr1.4:19145136-19145155 | None:intergenic | 20.0% |
| !! | TTTATTTATGATACTATTGG+AGG | - | chr1.4:19145137-19145156 | None:intergenic | 20.0% |
| !!! | AGTTGAAATCTTGATTTTTT+TGG | - | chr1.4:19140844-19140863 | None:intergenic | 20.0% |
| !!! | ATATGAATGTTTATGCATTT+TGG | + | chr1.4:19140770-19140789 | MS.gene061085:intron | 20.0% |
| !!! | CAATATTTTCTGTAATTATG+AGG | - | chr1.4:19142810-19142829 | None:intergenic | 20.0% |
| !!! | CATAATTTTTTATTCAGACT+TGG | - | chr1.4:19141020-19141039 | None:intergenic | 20.0% |
| !!! | GATCATACAGATATTTTTAT+AGG | - | chr1.4:19142376-19142395 | None:intergenic | 20.0% |
| !!! | GTTTTAGTATTCATTAAAGA+AGG | + | chr1.4:19144730-19144749 | MS.gene061085:intron | 20.0% |
| !!! | TAAGATTTTGAGATGATATA+TGG | - | chr1.4:19144181-19144200 | None:intergenic | 20.0% |
| !!! | TAGTAATGGAAGATAATATT+TGG | - | chr1.4:19143585-19143604 | None:intergenic | 20.0% |
| !!! | TGTCTATGAAATTCATTTTA+TGG | + | chr1.4:19140608-19140627 | MS.gene061085:intron | 20.0% |
| !!! | TGTTTGAAAAGTTTTTTTTG+TGG | + | chr1.4:19141620-19141639 | MS.gene061085:intron | 20.0% |
| !!! | TTTTTTCCAAATAAAAAAGC+AGG | + | chr1.4:19145425-19145444 | MS.gene061085:intron | 20.0% |
| ! | AAAACTCAACAAATAAAGAG+GGG | - | chr1.4:19143910-19143929 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGATTGTCAAAC+AGG | + | chr1.4:19142688-19142707 | MS.gene061085:CDS | 25.0% |
| ! | AACTCATACACAATTCATTA+TGG | - | chr1.4:19140739-19140758 | None:intergenic | 25.0% |
| ! | AAGATAATATTTGGCTGTTT+GGG | - | chr1.4:19143576-19143595 | None:intergenic | 25.0% |
| ! | AAGATCAAAGATAAAGAAAC+AGG | + | chr1.4:19142722-19142741 | MS.gene061085:CDS | 25.0% |
| ! | AAGTTTGATTCATAACTATC+TGG | + | chr1.4:19142599-19142618 | MS.gene061085:intron | 25.0% |
| ! | ACAATCATGTTCCAAATAAA+GGG | - | chr1.4:19143422-19143441 | None:intergenic | 25.0% |
| ! | ACATAGATTTAGAAAAATGG+AGG | + | chr1.4:19142175-19142194 | MS.gene061085:intron | 25.0% |
| ! | AGGCAATTATTATTAATGAG+TGG | + | chr1.4:19144201-19144220 | MS.gene061085:intron | 25.0% |
| ! | ATACATATTACTGCTTTGTA+CGG | + | chr1.4:19140368-19140387 | MS.gene061085:intron | 25.0% |
| ! | ATGAGGATAACTATGTATAA+CGG | - | chr1.4:19142793-19142812 | None:intergenic | 25.0% |
| ! | ATGTAAAAAGAAAATGATGG+TGG | + | chr1.4:19142874-19142893 | MS.gene061085:intron | 25.0% |
| ! | ATTATCTTCCATTACTATTG+TGG | + | chr1.4:19143588-19143607 | MS.gene061085:intron | 25.0% |
| ! | ATTCAACTAAGATACTTGTT+TGG | + | chr1.4:19143939-19143958 | MS.gene061085:intron | 25.0% |
| ! | CATGATGTCTATAAATAACA+AGG | - | chr1.4:19144314-19144333 | None:intergenic | 25.0% |
| ! | CTTTAATGAATACTAAAACG+GGG | - | chr1.4:19144729-19144748 | None:intergenic | 25.0% |
| ! | GAATAGAAAAACAAAGATTG+TGG | - | chr1.4:19144278-19144297 | None:intergenic | 25.0% |
| ! | GATTATGATTATACATGGTA+GGG | + | chr1.4:19143451-19143470 | MS.gene061085:intron | 25.0% |
| ! | GATTTATGCTTCTTAGTTAA+AGG | - | chr1.4:19141302-19141321 | None:intergenic | 25.0% |
| ! | GTCATCTAACAAAATGAAAT+TGG | - | chr1.4:19145561-19145580 | None:intergenic | 25.0% |
| ! | TAAATCATTCCACTAGTAAT+TGG | - | chr1.4:19140687-19140706 | None:intergenic | 25.0% |
| ! | TAAATCTAACATGATTACTG+CGG | + | chr1.4:19141316-19141335 | MS.gene061085:CDS | 25.0% |
| ! | TAAGGGATATAACAAAATGT+AGG | - | chr1.4:19144898-19144917 | None:intergenic | 25.0% |
| ! | TAATAAGATAGACACTCTTA+AGG | + | chr1.4:19143785-19143804 | MS.gene061085:CDS | 25.0% |
| ! | TAATATGTCCTTATAAAGCT+AGG | - | chr1.4:19141934-19141953 | None:intergenic | 25.0% |
| ! | TACAATCATGTTCCAAATAA+AGG | - | chr1.4:19143423-19143442 | None:intergenic | 25.0% |
| ! | TAGAATGCTAGATTGAAAAA+TGG | - | chr1.4:19142524-19142543 | None:intergenic | 25.0% |
| ! | TATAAATTATGTAATCCAGG+AGG | - | chr1.4:19143681-19143700 | None:intergenic | 25.0% |
| ! | TATGTGCTTTAATAAATAGG+TGG | - | chr1.4:19143178-19143197 | None:intergenic | 25.0% |
| ! | TATGTTTATGGTTCAATTTG+AGG | - | chr1.4:19144469-19144488 | None:intergenic | 25.0% |
| ! | TATTTATGATACTATTGGAG+GGG | - | chr1.4:19145135-19145154 | None:intergenic | 25.0% |
| ! | TCTGTAATTTGAATTTCAGA+AGG | + | chr1.4:19141401-19141420 | MS.gene061085:intron | 25.0% |
| ! | TGATGCTCAACTTAAAAATA+TGG | + | chr1.4:19141568-19141587 | MS.gene061085:CDS | 25.0% |
| ! | TGATTATGATTATACATGGT+AGG | + | chr1.4:19143450-19143469 | MS.gene061085:intron | 25.0% |
| ! | TTACCAATTAGTTGGTTAAT+TGG | - | chr1.4:19144357-19144376 | None:intergenic | 25.0% |
| ! | TTATTACAAAGAGAGATCAT+AGG | - | chr1.4:19145483-19145502 | None:intergenic | 25.0% |
| ! | TTCTATAACTATTGCCAATT+TGG | - | chr1.4:19142411-19142430 | None:intergenic | 25.0% |
| ! | TTTCCAATTAACCAACTAAT+TGG | + | chr1.4:19144351-19144370 | MS.gene061085:intron | 25.0% |
| !! | ATGTGCGATTTTATATAGAA+GGG | - | chr1.4:19144935-19144954 | None:intergenic | 25.0% |
| !! | ATTCTAGCTAAATATGTATG+GGG | + | chr1.4:19142538-19142557 | MS.gene061085:intron | 25.0% |
| !! | CATTCTAGCTAAATATGTAT+GGG | + | chr1.4:19142537-19142556 | MS.gene061085:intron | 25.0% |
| !! | GGAGTTGAAAAAAACTTTTT+GGG | - | chr1.4:19142932-19142951 | None:intergenic | 25.0% |
| !! | TAATTGGTAACTAACTCATT+AGG | + | chr1.4:19144367-19144386 | MS.gene061085:intron | 25.0% |
| !! | TACAATTTGTTCTTGTTCTT+CGG | + | chr1.4:19140971-19140990 | MS.gene061085:intron | 25.0% |
| !! | TATTGTTGTTGTATGATCAT+AGG | + | chr1.4:19143540-19143559 | MS.gene061085:intron | 25.0% |
| !! | TTATTTGGAACATGATTGTA+GGG | + | chr1.4:19143423-19143442 | MS.gene061085:intron | 25.0% |
| !! | TTTATTTGGAACATGATTGT+AGG | + | chr1.4:19143422-19143441 | MS.gene061085:intron | 25.0% |
| !!! | ACAGATATTTTTATAGGACT+AGG | - | chr1.4:19142370-19142389 | None:intergenic | 25.0% |
| !!! | ATTTTCATATTTCTTTAGGG+TGG | + | chr1.4:19140650-19140669 | MS.gene061085:intron | 25.0% |
| !!! | CAGTTTTTTAGTAAGATAAC+TGG | + | chr1.4:19141666-19141685 | MS.gene061085:intron | 25.0% |
| !!! | CTTATTTTTCTTGTGTAAGA+AGG | + | chr1.4:19145297-19145316 | MS.gene061085:intron | 25.0% |
| !!! | GGATGGTTATAAAAAGTATT+TGG | - | chr1.4:19140291-19140310 | None:intergenic | 25.0% |
| !!! | TTGTTTTGAGGTTATGTTTA+TGG | - | chr1.4:19144481-19144500 | None:intergenic | 25.0% |
| !!! | TTTTCATATTTCTTTAGGGT+GGG | + | chr1.4:19140651-19140670 | MS.gene061085:intron | 25.0% |
| AAAAGTTATGTTGTAACACG+AGG | - | chr1.4:19142000-19142019 | None:intergenic | 30.0% | |
| AAAGCACATAACAAAACTCT+GGG | + | chr1.4:19143188-19143207 | MS.gene061085:intron | 30.0% | |
| AAATTGTAAGGTCTTCCAAA+CGG | - | chr1.4:19139957-19139976 | None:intergenic | 30.0% | |
| AACCTGTAAGTTTAATGACT+GGG | + | chr1.4:19140882-19140901 | MS.gene061085:CDS | 30.0% | |
| AAGAAATGAAAACTGTTAGG+AGG | + | chr1.4:19144086-19144105 | MS.gene061085:intron | 30.0% | |
| AAGTAAAAGGAGAATGAACT+AGG | + | chr1.4:19144836-19144855 | MS.gene061085:intron | 30.0% | |
| AATGCTAGATTGAAAAATGG+TGG | - | chr1.4:19142521-19142540 | None:intergenic | 30.0% | |
| AATGGCAGTTCATTCAAATT+CGG | - | chr1.4:19141816-19141835 | None:intergenic | 30.0% | |
| AGGAAGAAATGAAAACTGTT+AGG | + | chr1.4:19144083-19144102 | MS.gene061085:intron | 30.0% | |
| AGGGGAATAAGAATTGAATA+AGG | - | chr1.4:19144916-19144935 | None:intergenic | 30.0% | |
| AGTAAGTAAATTCCTTCTCA+AGG | + | chr1.4:19142571-19142590 | MS.gene061085:intron | 30.0% | |
| ATAAATAACAAGGGTTGAGA+GGG | - | chr1.4:19144304-19144323 | None:intergenic | 30.0% | |
| ATATAAATTCGACAATGGGT+TGG | + | chr1.4:19142836-19142855 | MS.gene061085:intron | 30.0% | |
| ATATGTAGAAGAGATTAGAG+AGG | - | chr1.4:19145451-19145470 | None:intergenic | 30.0% | |
| ATCTAAGTTACCTAAGATGA+AGG | + | chr1.4:19145532-19145551 | MS.gene061085:intron | 30.0% | |
| ATTCTTTAGTACAGGTCATA+TGG | + | chr1.4:19141227-19141246 | MS.gene061085:intron | 30.0% | |
| CAACAATCTTTCCCTTTATT+TGG | + | chr1.4:19143408-19143427 | MS.gene061085:intron | 30.0% | |
| CAATCATTCACACATGTTAT+AGG | + | chr1.4:19141750-19141769 | MS.gene061085:intron | 30.0% | |
| CAATGAAAATGATTCCATTG+AGG | + | chr1.4:19143869-19143888 | MS.gene061085:CDS | 30.0% | |
| CGATTGAAAACACTAGTTAT+AGG | + | chr1.4:19141848-19141867 | MS.gene061085:intron | 30.0% | |
| CTACTAATTTGAGTGTGATT+TGG | + | chr1.4:19145673-19145692 | MS.gene061085:intron | 30.0% | |
| GAAGATAATATTTGGCTGTT+TGG | - | chr1.4:19143577-19143596 | None:intergenic | 30.0% | |
| GAATTAGGAACAGTAAACAA+TGG | - | chr1.4:19144517-19144536 | None:intergenic | 30.0% | |
| GACATATTAAGCACTAATGT+AGG | + | chr1.4:19141945-19141964 | MS.gene061085:intron | 30.0% | |
| GATGTCAGTAAATCATGTTA+TGG | + | chr1.4:19139993-19140012 | MS.gene061085:intron | 30.0% | |
| GGGGAATAAGAATTGAATAA+GGG | - | chr1.4:19144915-19144934 | None:intergenic | 30.0% | |
| GTCCTAAACATGCATTTAAA+TGG | + | chr1.4:19143120-19143139 | MS.gene061085:intron | 30.0% | |
| GTCGCAAAAATAAAACTCTA+AGG | + | chr1.4:19142197-19142216 | MS.gene061085:intron | 30.0% | |
| TAAAGCACATAACAAAACTC+TGG | + | chr1.4:19143187-19143206 | MS.gene061085:intron | 30.0% | |
| TATAAATAACAAGGGTTGAG+AGG | - | chr1.4:19144305-19144324 | None:intergenic | 30.0% | |
| TCAGGACTTTCTTGTTAAAT+GGG | + | chr1.4:19144963-19144982 | MS.gene061085:intron | 30.0% | |
| TGAGTTAGTTACCAATTAGT+TGG | - | chr1.4:19144365-19144384 | None:intergenic | 30.0% | |
| TTATAGGCACTCTTTGATAT+TGG | + | chr1.4:19141864-19141883 | MS.gene061085:intron | 30.0% | |
| TTCAACTTCCACAATAGTAA+TGG | - | chr1.4:19143599-19143618 | None:intergenic | 30.0% | |
| TTCAGGACTTTCTTGTTAAA+TGG | + | chr1.4:19144962-19144981 | MS.gene061085:intron | 30.0% | |
| TTGAAACTGATCATCAATGA+AGG | - | chr1.4:19143313-19143332 | None:intergenic | 30.0% | |
| ! | AAATGCATGTTTAGGACATA+AGG | - | chr1.4:19143117-19143136 | None:intergenic | 30.0% |
| ! | AATAGATCTGCAATTGATTC+TGG | - | chr1.4:19145734-19145753 | None:intergenic | 30.0% |
| ! | ATGTACTGATGATACAAGTA+AGG | - | chr1.4:19140327-19140346 | None:intergenic | 30.0% |
| ! | CGGAGTTGAAAAAAACTTTT+TGG | - | chr1.4:19142933-19142952 | None:intergenic | 30.0% |
| ! | CTAGATTTGCTTAAATTTGC+TGG | + | chr1.4:19142323-19142342 | MS.gene061085:intron | 30.0% |
| ! | CTCAATGGAATCATTTTCAT+TGG | - | chr1.4:19143871-19143890 | None:intergenic | 30.0% |
| ! | GAAATGGTACACAGAAATTT+TGG | + | chr1.4:19140818-19140837 | MS.gene061085:CDS | 30.0% |
| ! | GATGTGCGATTTTATATAGA+AGG | - | chr1.4:19144936-19144955 | None:intergenic | 30.0% |
| ! | GCATTCTAGCTAAATATGTA+TGG | + | chr1.4:19142536-19142555 | MS.gene061085:intron | 30.0% |
| ! | TATACATACAATGTGTCGAT+GGG | - | chr1.4:19142268-19142287 | None:intergenic | 30.0% |
| ! | TGCCATTTAAATGCATGTTT+AGG | - | chr1.4:19143125-19143144 | None:intergenic | 30.0% |
| ! | TGGTGGTTCATTTTCATTAT+TGG | + | chr1.4:19142891-19142910 | MS.gene061085:intron | 30.0% |
| ! | TGTGCGATTTTATATAGAAG+GGG | - | chr1.4:19144934-19144953 | None:intergenic | 30.0% |
| ! | TTTTTATAGGACTAGGTAGA+TGG | - | chr1.4:19142363-19142382 | None:intergenic | 30.0% |
| !! | AATGTTTATGCATTTTGGTC+AGG | + | chr1.4:19140775-19140794 | MS.gene061085:intron | 30.0% |
| !! | AATTTGTTATAGTTTCCTCC+TGG | + | chr1.4:19143663-19143682 | MS.gene061085:intron | 30.0% |
| !! | CAAAAATAAAACTCTAAGGC+TGG | + | chr1.4:19142201-19142220 | MS.gene061085:intron | 30.0% |
| !! | CTTTCACATTCTTTGTTGTT+TGG | + | chr1.4:19140438-19140457 | MS.gene061085:intron | 30.0% |
| !! | TAGTTCTGAGTATTGTATTG+TGG | + | chr1.4:19145623-19145642 | MS.gene061085:intron | 30.0% |
| !! | TTTCATATTTCTTTAGGGTG+GGG | + | chr1.4:19140652-19140671 | MS.gene061085:intron | 30.0% |
| !!! | AACATTTTTTGAGAAGCTCT+TGG | + | chr1.4:19145262-19145281 | MS.gene061085:intron | 30.0% |
| AAACAGGCTTATTACAATCC+TGG | + | chr1.4:19140258-19140277 | MS.gene061085:intron | 35.0% | |
| AAAGAGGGGAGTTAAAATGA+TGG | - | chr1.4:19143896-19143915 | None:intergenic | 35.0% | |
| AAATCTAGCAAGATTCGAGA+TGG | - | chr1.4:19142311-19142330 | None:intergenic | 35.0% | |
| AAATTGGCTACCTTCATCTT+AGG | - | chr1.4:19145545-19145564 | None:intergenic | 35.0% | |
| AACAACTATGTGGGGTTTAT+TGG | - | chr1.4:19140521-19140540 | None:intergenic | 35.0% | |
| AACAGGCTTATTACAATCCT+GGG | + | chr1.4:19140259-19140278 | MS.gene061085:intron | 35.0% | |
| AAGGTCACAAGAAAAAGCAA+AGG | - | chr1.4:19143098-19143117 | None:intergenic | 35.0% | |
| ACAAACCTATGTTACCACAT+TGG | + | chr1.4:19140111-19140130 | MS.gene061085:CDS | 35.0% | |
| ACCAAGATACCATCACAAAT+TGG | - | chr1.4:19140176-19140195 | None:intergenic | 35.0% | |
| ACCAATTTGTGATGGTATCT+TGG | + | chr1.4:19140172-19140191 | MS.gene061085:intron | 35.0% | |
| ACCTGTAAGTTTAATGACTG+GGG | + | chr1.4:19140883-19140902 | MS.gene061085:CDS | 35.0% | |
| ACTCTCACTAACTCATTCTA+CGG | + | chr1.4:19144867-19144886 | MS.gene061085:intron | 35.0% | |
| ATCAAAGAAACGATGTTCTG+AGG | + | chr1.4:19143278-19143297 | MS.gene061085:intron | 35.0% | |
| ATGCAGTACTCAAACAGAAA+AGG | + | chr1.4:19144804-19144823 | MS.gene061085:intron | 35.0% | |
| ATGTAATTGAATCCACCTAG+TGG | + | chr1.4:19143495-19143514 | MS.gene061085:intron | 35.0% | |
| ATTGACAGTAAAAGGGTCTA+AGG | - | chr1.4:19144561-19144580 | None:intergenic | 35.0% | |
| CAACCTGTAAGTTTAATGAC+TGG | + | chr1.4:19140881-19140900 | MS.gene061085:CDS | 35.0% | |
| CATCGACACATTGTATGTAT+AGG | + | chr1.4:19142267-19142286 | MS.gene061085:intron | 35.0% | |
| CATTATGATATGCACACACT+TGG | + | chr1.4:19141706-19141725 | MS.gene061085:intron | 35.0% | |
| CTAACTTCGAAACATAACAG+TGG | - | chr1.4:19141167-19141186 | None:intergenic | 35.0% | |
| CTATACATACAATGTGTCGA+TGG | - | chr1.4:19142269-19142288 | None:intergenic | 35.0% | |
| GAACAAATTGTACCTCATTG+AGG | - | chr1.4:19140963-19140982 | None:intergenic | 35.0% | |
| GAAGAGCTAGTTAAGAAGTA+TGG | + | chr1.4:19145707-19145726 | MS.gene061085:CDS | 35.0% | |
| GATAACAAAACAGCTGTGTT+TGG | + | chr1.4:19143019-19143038 | MS.gene061085:intron | 35.0% | |
| GATTTACTGACATCATCTTG+AGG | - | chr1.4:19139987-19140006 | None:intergenic | 35.0% | |
| GTCTAATTACATCCTTTCTG+TGG | + | chr1.4:19141267-19141286 | MS.gene061085:intron | 35.0% | |
| GTTGTATGATCATAGGATCT+TGG | + | chr1.4:19143547-19143566 | MS.gene061085:intron | 35.0% | |
| TACTCTGAACCAATTTGTGA+TGG | + | chr1.4:19140164-19140183 | MS.gene061085:intron | 35.0% | |
| TATGGTTCAATTTGAGGACA+GGG | - | chr1.4:19144463-19144482 | None:intergenic | 35.0% | |
| TCAGTACATCTTGCAAAATC+AGG | + | chr1.4:19140338-19140357 | MS.gene061085:CDS | 35.0% | |
| TCATTTGACTCTGCTGAATT+AGG | - | chr1.4:19144532-19144551 | None:intergenic | 35.0% | |
| TGGAAGACCTTACAATTTCA+CGG | + | chr1.4:19139959-19139978 | MS.gene061085:CDS | 35.0% | |
| TTAAGCACTAATGTAGGACT+CGG | + | chr1.4:19141951-19141970 | MS.gene061085:intron | 35.0% | |
| TTATGGTTCAATTTGAGGAC+AGG | - | chr1.4:19144464-19144483 | None:intergenic | 35.0% | |
| TTCCTTGTAGAAAATCCATC+TGG | + | chr1.4:19141482-19141501 | MS.gene061085:intron | 35.0% | |
| ! | AAGTGATGGAATGTAACCAT+GGG | + | chr1.4:19142075-19142094 | MS.gene061085:intron | 35.0% |
| ! | AATGAGTTAGTGAGAGTATG+TGG | - | chr1.4:19144864-19144883 | None:intergenic | 35.0% |
| ! | ACTAGGTGGATTCAATTACA+TGG | - | chr1.4:19143496-19143515 | None:intergenic | 35.0% |
| ! | AGGCTTTTCTACTACGTAAA+AGG | + | chr1.4:19145226-19145245 | MS.gene061085:intron | 35.0% |
| ! | ATACATACAATGTGTCGATG+GGG | - | chr1.4:19142267-19142286 | None:intergenic | 35.0% |
| ! | CTAATTTGAGTGTGATTTGG+TGG | + | chr1.4:19145676-19145695 | MS.gene061085:intron | 35.0% |
| ! | TGTGGTAACATAGGTTTGTT+TGG | - | chr1.4:19140110-19140129 | None:intergenic | 35.0% |
| ! | TGTTAGTTTCGTACAAGTGT+CGG | + | chr1.4:19142098-19142117 | MS.gene061085:intron | 35.0% |
| ! | TTAGCTGCATTTCTTTTGAC+AGG | + | chr1.4:19142644-19142663 | MS.gene061085:intron | 35.0% |
| !! | AGGAATGTCCTAGCTTTATA+AGG | + | chr1.4:19141923-19141942 | MS.gene061085:intron | 35.0% |
| !! | GTTAAAATGATGGACCTCAA+TGG | - | chr1.4:19143886-19143905 | None:intergenic | 35.0% |
| !!! | AAGTTGGTCTTTTGACAGAT+AGG | - | chr1.4:19144602-19144621 | None:intergenic | 35.0% |
| !!! | AGTTGGTCTTTTGACAGATA+GGG | - | chr1.4:19144601-19144620 | None:intergenic | 35.0% |
| !!! | TGCAAAGGCTTTTTCAGAAA+TGG | + | chr1.4:19140802-19140821 | MS.gene061085:CDS | 35.0% |
| AACATCAACGTCAACAACGT+CGG | - | chr1.4:19141549-19141568 | None:intergenic | 40.0% | |
| AACCTCAAAACAATCCCTCT+AGG | + | chr1.4:19144488-19144507 | MS.gene061085:intron | 40.0% | |
| AATACTAAAACGGGGTAGAG+AGG | - | chr1.4:19144721-19144740 | None:intergenic | 40.0% | |
| AATCGCACATCATGTTGTTC+AGG | + | chr1.4:19144945-19144964 | MS.gene061085:intron | 40.0% | |
| AATTACATCCTTTCTGTGGC+AGG | + | chr1.4:19141271-19141290 | MS.gene061085:intron | 40.0% | |
| ACATCGACGCTTCAAATTGA+AGG | - | chr1.4:19142154-19142173 | None:intergenic | 40.0% | |
| ACATTCCTTACCTTACGAGT+CGG | - | chr1.4:19141911-19141930 | None:intergenic | 40.0% | |
| ACCAACTTGTATTCTCTGCA+TGG | + | chr1.4:19144614-19144633 | MS.gene061085:intron | 40.0% | |
| ACCTCAAAACAATCCCTCTA+GGG | + | chr1.4:19144489-19144508 | MS.gene061085:intron | 40.0% | |
| ACTACGTAAAAGGAGAAGCT+CGG | + | chr1.4:19145236-19145255 | MS.gene061085:intron | 40.0% | |
| ACTGGGGAATCAAGAGAATT+TGG | + | chr1.4:19140899-19140918 | MS.gene061085:CDS | 40.0% | |
| ATAGCTCTTCACATTCTTGC+TGG | - | chr1.4:19143764-19143783 | None:intergenic | 40.0% | |
| ATCTGAGGATTGTCATGTCA+CGG | - | chr1.4:19144772-19144791 | None:intergenic | 40.0% | |
| ATGAAAACTGTTAGGAGGTC+AGG | + | chr1.4:19144091-19144110 | MS.gene061085:intron | 40.0% | |
| CAAACTTAGCAACCTTGAGA+AGG | - | chr1.4:19142586-19142605 | None:intergenic | 40.0% | |
| CAAGTACCAACAATCCCTTT+AGG | + | chr1.4:19144391-19144410 | MS.gene061085:intron | 40.0% | |
| CAATCGCAGATGACACAAAA+TGG | - | chr1.4:19141834-19141853 | None:intergenic | 40.0% | |
| CATTTGACGCAATGTATCTG+AGG | - | chr1.4:19144787-19144806 | None:intergenic | 40.0% | |
| CTTTCTTAGACTAGGACAGA+GGG | + | chr1.4:19140398-19140417 | MS.gene061085:intron | 40.0% | |
| GACAATACAACCCACCTAAA+GGG | - | chr1.4:19144408-19144427 | None:intergenic | 40.0% | |
| GCATGCTTCTTTCTTAGACT+AGG | + | chr1.4:19140390-19140409 | MS.gene061085:intron | 40.0% | |
| GTAGTCCAATGTGGTAACAT+AGG | - | chr1.4:19140119-19140138 | None:intergenic | 40.0% | |
| GTGGTATCATACTCAAAGGT+GGG | - | chr1.4:19145175-19145194 | None:intergenic | 40.0% | |
| TAAACCCCACATAGTTGTTG+AGG | + | chr1.4:19140522-19140541 | MS.gene061085:CDS | 40.0% | |
| TAATTAGCAGCAACACACGA+TGG | + | chr1.4:19144685-19144704 | MS.gene061085:intron | 40.0% | |
| TACCAACAATCCCTTTAGGT+GGG | + | chr1.4:19144395-19144414 | MS.gene061085:intron | 40.0% | |
| TACTGCGGATGGTAAGATTA+TGG | + | chr1.4:19141331-19141350 | MS.gene061085:intron | 40.0% | |
| TCCATGCAGAGAATACAAGT+TGG | - | chr1.4:19144618-19144637 | None:intergenic | 40.0% | |
| TCCCCAGTCATTAAACTTAC+AGG | - | chr1.4:19140887-19140906 | None:intergenic | 40.0% | |
| TCTAACATGATTACTGCGGA+TGG | + | chr1.4:19141320-19141339 | MS.gene061085:CDS | 40.0% | |
| TCTTTCTTAGACTAGGACAG+AGG | + | chr1.4:19140397-19140416 | MS.gene061085:intron | 40.0% | |
| TGAAGATGAATCCCGTCAAT+TGG | + | chr1.4:19144127-19144146 | MS.gene061085:intron | 40.0% | |
| TGACAATACAACCCACCTAA+AGG | - | chr1.4:19144409-19144428 | None:intergenic | 40.0% | |
| TGAGGGGATTGACAGTAAAA+GGG | - | chr1.4:19144568-19144587 | None:intergenic | 40.0% | |
| TGTAGAAAATCCATCTGGTC+TGG | + | chr1.4:19141487-19141506 | MS.gene061085:intron | 40.0% | |
| TTCTGCACCCAAAAATGACA+GGG | + | chr1.4:19140931-19140950 | MS.gene061085:CDS | 40.0% | |
| TTGAGGGGATTGACAGTAAA+AGG | - | chr1.4:19144569-19144588 | None:intergenic | 40.0% | |
| TTGGGGTTACCAATTACTAG+TGG | + | chr1.4:19140675-19140694 | MS.gene061085:intron | 40.0% | |
| TTGTACGAAACTAACACCCA+TGG | - | chr1.4:19142094-19142113 | None:intergenic | 40.0% | |
| ! | AAAGTATTTGGAGTAGACCC+AGG | - | chr1.4:19140279-19140298 | None:intergenic | 40.0% |
| ! | AAGTCTGCTCTTTTACCACT+AGG | - | chr1.4:19143513-19143532 | None:intergenic | 40.0% |
| ! | AGATAGGGATGAGACTTTTG+AGG | - | chr1.4:19144586-19144605 | None:intergenic | 40.0% |
| ! | ATAGGGATGAGACTTTTGAG+GGG | - | chr1.4:19144584-19144603 | None:intergenic | 40.0% |
| ! | ATTGACCAAGAGTTGGTTCT+TGG | - | chr1.4:19144252-19144271 | None:intergenic | 40.0% |
| ! | CTGCATTTCTTTTGACAGGA+AGG | + | chr1.4:19142648-19142667 | MS.gene061085:intron | 40.0% |
| ! | GAAGTGATGGAATGTAACCA+TGG | + | chr1.4:19142074-19142093 | MS.gene061085:intron | 40.0% |
| ! | GATAGGGATGAGACTTTTGA+GGG | - | chr1.4:19144585-19144604 | None:intergenic | 40.0% |
| ! | TAAGCTTTCTGAGGAATGTC+TGG | + | chr1.4:19143839-19143858 | MS.gene061085:CDS | 40.0% |
| ! | TTGACCAAGAGTTGGTTCTT+GGG | - | chr1.4:19144251-19144270 | None:intergenic | 40.0% |
| !! | ATATTTCTTTAGGGTGGGGT+TGG | + | chr1.4:19140656-19140675 | MS.gene061085:intron | 40.0% |
| !! | ATTTGAGTGTGATTTGGTGG+TGG | + | chr1.4:19145679-19145698 | MS.gene061085:intron | 40.0% |
| !! | CATTCTTTGTTGTTTGGTGC+AGG | + | chr1.4:19140444-19140463 | MS.gene061085:intron | 40.0% |
| !! | GACCAGATGGATTTTCTACA+AGG | - | chr1.4:19141487-19141506 | None:intergenic | 40.0% |
| !! | TATTTCTTTAGGGTGGGGTT+GGG | + | chr1.4:19140657-19140676 | MS.gene061085:intron | 40.0% |
| !!! | AGGACAGGGTGAATGTTTTT+TGG | - | chr1.4:19144449-19144468 | None:intergenic | 40.0% |
| !!! | GACAGGGTGAATGTTTTTTG+GGG | - | chr1.4:19144447-19144466 | None:intergenic | 40.0% |
| !!! | GAGAGGCCTGCTTTTTTATT+TGG | - | chr1.4:19145434-19145453 | None:intergenic | 40.0% |
| !!! | GGACAGGGTGAATGTTTTTT+GGG | - | chr1.4:19144448-19144467 | None:intergenic | 40.0% |
| !!! | GTTCCATCCCTGTCATTTTT+GGG | - | chr1.4:19140941-19140960 | None:intergenic | 40.0% |
| !!! | TAGCGTGCTCGTCTTATTTT+AGG | + | chr1.4:19145206-19145225 | MS.gene061085:intron | 40.0% |
| AAAACTGTTAGGAGGTCAGG+TGG | + | chr1.4:19144094-19144113 | MS.gene061085:intron | 45.0% | |
| AAAGTGCAGGTAGCCAAGTT+AGG | - | chr1.4:19145063-19145082 | None:intergenic | 45.0% | |
| AAATTCTGAGCCAGACCAGA+TGG | - | chr1.4:19141500-19141519 | None:intergenic | 45.0% | |
| AACCCACCTAAAGGGATTGT+TGG | - | chr1.4:19144400-19144419 | None:intergenic | 45.0% | |
| AAGGAAGAATCCACTCCGTT+TGG | + | chr1.4:19139939-19139958 | MS.gene061085:CDS | 45.0% | |
| AATCCCGTCAATTGGCAAAG+AGG | + | chr1.4:19144135-19144154 | MS.gene061085:intron | 45.0% | |
| ACAAGATCAGTTGCACATGC+AGG | - | chr1.4:19142440-19142459 | None:intergenic | 45.0% | |
| ACATTGGACTACAGCTATGC+AGG | + | chr1.4:19140127-19140146 | MS.gene061085:CDS | 45.0% | |
| ACGAGGTAGTGTGGACTTAT+TGG | - | chr1.4:19141983-19142002 | None:intergenic | 45.0% | |
| AGGCTGTTATGCAAGTCGAT+AGG | + | chr1.4:19145317-19145336 | MS.gene061085:intron | 45.0% | |
| AGTAAACAATGGCACCCTAG+AGG | - | chr1.4:19144506-19144525 | None:intergenic | 45.0% | |
| CTCACCTCAACAACTATGTG+GGG | - | chr1.4:19140529-19140548 | None:intergenic | 45.0% | |
| CTTCAACGTGATGCTCTACA+TGG | + | chr1.4:19140481-19140500 | MS.gene061085:CDS | 45.0% | |
| CTTCTGCACCCAAAAATGAC+AGG | + | chr1.4:19140930-19140949 | MS.gene061085:CDS | 45.0% | |
| GAATTTAGGGACAGTCGTCA+AGG | + | chr1.4:19141514-19141533 | MS.gene061085:CDS | 45.0% | |
| GCTCACCTCAACAACTATGT+GGG | - | chr1.4:19140530-19140549 | None:intergenic | 45.0% | |
| GGAGGGGAAAAAAATTGCAC+AGG | - | chr1.4:19145119-19145138 | None:intergenic | 45.0% | |
| GGTACATACTAGACCATGAC+TGG | + | chr1.4:19142743-19142762 | MS.gene061085:intron | 45.0% | |
| GGTGGTATCATACTCAAAGG+TGG | - | chr1.4:19145176-19145195 | None:intergenic | 45.0% | |
| GGTTCCTCTTTGCCAATTGA+CGG | - | chr1.4:19144142-19144161 | None:intergenic | 45.0% | |
| GTAAACAATGGCACCCTAGA+GGG | - | chr1.4:19144505-19144524 | None:intergenic | 45.0% | |
| GTACCAACAATCCCTTTAGG+TGG | + | chr1.4:19144394-19144413 | MS.gene061085:intron | 45.0% | |
| GTATGATACCACCACCACTT+AGG | + | chr1.4:19145183-19145202 | MS.gene061085:intron | 45.0% | |
| GTGAAAGTGAAGCAGATGAC+TGG | - | chr1.4:19140425-19140444 | None:intergenic | 45.0% | |
| GTTCCTCTTTGCCAATTGAC+GGG | - | chr1.4:19144141-19144160 | None:intergenic | 45.0% | |
| TCCACAACGTCATGCCAAAT+TGG | + | chr1.4:19142394-19142413 | MS.gene061085:intron | 45.0% | |
| TCTTCACATTCTTGCTGGCA+AGG | - | chr1.4:19143759-19143778 | None:intergenic | 45.0% | |
| TGAGCTGCAGTTCATGTCTT+TGG | - | chr1.4:19141436-19141455 | None:intergenic | 45.0% | |
| TGCATAGCTGTAGTCCAATG+TGG | - | chr1.4:19140128-19140147 | None:intergenic | 45.0% | |
| TGTTGTAACACGAGGTAGTG+TGG | - | chr1.4:19141992-19142011 | None:intergenic | 45.0% | |
| ! | AACGCTTGCTAAGCTTTCTG+AGG | + | chr1.4:19143830-19143849 | MS.gene061085:CDS | 45.0% |
| ! | ATATGGTGTTAAGCCCACTG+TGG | - | chr1.4:19144164-19144183 | None:intergenic | 45.0% |
| ! | CTGGTCTGGCTCAGAATTTA+GGG | + | chr1.4:19141501-19141520 | MS.gene061085:CDS | 45.0% |
| ! | GGTGGTGGTATCATACTCAA+AGG | - | chr1.4:19145179-19145198 | None:intergenic | 45.0% |
| ! | TATGGTGTTAAGCCCACTGT+GGG | - | chr1.4:19144163-19144182 | None:intergenic | 45.0% |
| ! | TCTGCTCTTTTACCACTAGG+TGG | - | chr1.4:19143510-19143529 | None:intergenic | 45.0% |
| ! | TCTGGTCTGGCTCAGAATTT+AGG | + | chr1.4:19141500-19141519 | MS.gene061085:CDS | 45.0% |
| ! | TTTTGGTCAGGATGCTGCAA+AGG | + | chr1.4:19140787-19140806 | MS.gene061085:intron | 45.0% |
| !! | ACCCTAGAGGGATTGTTTTG+AGG | - | chr1.4:19144493-19144512 | None:intergenic | 45.0% |
| !! | ATTTCTTTAGGGTGGGGTTG+GGG | + | chr1.4:19140658-19140677 | MS.gene061085:intron | 45.0% |
| !! | TAAGACCGACTCGTAAGGTA+AGG | + | chr1.4:19141903-19141922 | MS.gene061085:intron | 45.0% |
| !! | TCTCATAAGACCGACTCGTA+AGG | + | chr1.4:19141898-19141917 | MS.gene061085:intron | 45.0% |
| !! | TGAGGCACCGTGAAATTGTA+AGG | - | chr1.4:19139969-19139988 | None:intergenic | 45.0% |
| !!! | CATTTTTGGGTGCAGAAGAC+TGG | - | chr1.4:19140928-19140947 | None:intergenic | 45.0% |
| !!! | CTGTCATTTTGATCTCCCTC+TGG | - | chr1.4:19141077-19141096 | None:intergenic | 45.0% |
| !!! | GGTTCCATCCCTGTCATTTT+TGG | - | chr1.4:19140942-19140961 | None:intergenic | 45.0% |
| !!! | CTATTTTATTAAATTATTAT+TGG | - | chr1.4:19142055-19142074 | None:intergenic | 5.0% |
| AAGTAAGGAGCAGCTGCAAG+TGG | - | chr1.4:19140312-19140331 | None:intergenic | 50.0% | |
| ACAGGGATGGAACCTCAATG+AGG | + | chr1.4:19140948-19140967 | MS.gene061085:CDS | 50.0% | |
| AGGAGAATCCTGCCACAGAA+AGG | - | chr1.4:19141282-19141301 | None:intergenic | 50.0% | |
| ATCTCCCTCTGGTGATCTCT+TGG | - | chr1.4:19141066-19141085 | None:intergenic | 50.0% | |
| CTACCTGCACTTTGCTGACA+TGG | + | chr1.4:19145070-19145089 | MS.gene061085:intron | 50.0% | |
| GCACCCAAAAATGACAGGGA+TGG | + | chr1.4:19140935-19140954 | MS.gene061085:CDS | 50.0% | |
| GCCAATTTGGCATGACGTTG+TGG | - | chr1.4:19142398-19142417 | None:intergenic | 50.0% | |
| GCTTAGCAAGCGTTTGTGCT+AGG | - | chr1.4:19143824-19143843 | None:intergenic | 50.0% | |
| GGAACCAAGAGATCACCAGA+GGG | + | chr1.4:19141059-19141078 | MS.gene061085:CDS | 50.0% | |
| GGCTCACCTCAACAACTATG+TGG | - | chr1.4:19140531-19140550 | None:intergenic | 50.0% | |
| GGGTTTATTGGACAGCCTCA+CGG | - | chr1.4:19140509-19140528 | None:intergenic | 50.0% | |
| GGTAGCCAAGTTAGGCACAT+CGG | - | chr1.4:19145055-19145074 | None:intergenic | 50.0% | |
| GGTTTATTGGACAGCCTCAC+GGG | - | chr1.4:19140508-19140527 | None:intergenic | 50.0% | |
| GTAAGGTCTTCCAAACGGAG+TGG | - | chr1.4:19139952-19139971 | None:intergenic | 50.0% | |
| TCCATCCGATGTGCCTAACT+TGG | + | chr1.4:19145047-19145066 | MS.gene061085:intron | 50.0% | |
| TGGAACCAAGAGATCACCAG+AGG | + | chr1.4:19141058-19141077 | MS.gene061085:CDS | 50.0% | |
| ! | ACCAAGAGTTGGTTCTTGGG+CGG | - | chr1.4:19144248-19144267 | None:intergenic | 50.0% |
| ! | GTGCATTGCAGCAGGTTTTG+TGG | + | chr1.4:19142765-19142784 | MS.gene061085:intron | 50.0% |
| !! | GTGGAGCATTGACCAAGAGT+TGG | - | chr1.4:19144259-19144278 | None:intergenic | 50.0% |
| !! | GTGTGATTTGGTGGTGGAAC+AGG | + | chr1.4:19145685-19145704 | MS.gene061085:intron | 50.0% |
| AAGGAGCAGCTGCAAGTGGA+TGG | - | chr1.4:19140308-19140327 | None:intergenic | 55.0% | |
| ACCGCCCAAGAACCAACTCT+TGG | + | chr1.4:19144244-19144263 | MS.gene061085:intron | 55.0% | |
| AGACGAGCACGCTACCTAAG+TGG | - | chr1.4:19145200-19145219 | None:intergenic | 55.0% | |
| AGGCACATCGGATGGACATG+TGG | - | chr1.4:19145043-19145062 | None:intergenic | 55.0% | |
| ATGCTCTACATGGTCCCGTG+AGG | + | chr1.4:19140491-19140510 | MS.gene061085:CDS | 55.0% | |
| CATGACTGGTGCATTGCAGC+AGG | + | chr1.4:19142757-19142776 | MS.gene061085:intron | 55.0% | |
| CGGATGGACATGTGGGAGTA+GGG | - | chr1.4:19145035-19145054 | None:intergenic | 55.0% | |
| CTGCTGCAATGCACCAGTCA+TGG | - | chr1.4:19142759-19142778 | None:intergenic | 55.0% | |
| GAGCCATGTCAGCAAAGTGC+AGG | - | chr1.4:19145076-19145095 | None:intergenic | 55.0% | |
| GCCAAGTTAGGCACATCGGA+TGG | - | chr1.4:19145051-19145070 | None:intergenic | 55.0% | |
| GGCAAAGAGGAACCCACAGT+GGG | + | chr1.4:19144148-19144167 | MS.gene061085:intron | 55.0% | |
| GGCACATCGGATGGACATGT+GGG | - | chr1.4:19145042-19145061 | None:intergenic | 55.0% | |
| TCGGATGGACATGTGGGAGT+AGG | - | chr1.4:19145036-19145055 | None:intergenic | 55.0% | |
| TGGCAAAGAGGAACCCACAG+TGG | + | chr1.4:19144147-19144166 | MS.gene061085:intron | 55.0% | |
| ! | AGTAGGGAGTGTGTGAGGAG+AGG | - | chr1.4:19145019-19145038 | None:intergenic | 55.0% |
| ! | GTCGATGGGGCATCTCATGT+GGG | - | chr1.4:19142254-19142273 | None:intergenic | 55.0% |
| ! | TGTCGATGGGGCATCTCATG+TGG | - | chr1.4:19142255-19142274 | None:intergenic | 55.0% |
| CGAGCACGCTACCTAAGTGG+TGG | - | chr1.4:19145197-19145216 | None:intergenic | 60.0% | |
| GCACGCTACCTAAGTGGTGG+TGG | - | chr1.4:19145194-19145213 | None:intergenic | 60.0% | |
| TGTGTGCGCAGTGCAGCAAG+TGG | + | chr1.4:19141038-19141057 | MS.gene061085:intron | 60.0% | |
| ! | GTGGGAGTAGGGAGTGTGTG+AGG | - | chr1.4:19145024-19145043 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 19139933 | 19145772 | 19139933 | ID=MS.gene061085 |
| chr1.4 | mRNA | 19139933 | 19145772 | 19139933 | ID=MS.gene061085.t1;Parent=MS.gene061085 |
| chr1.4 | exon | 19139933 | 19139995 | 19139933 | ID=MS.gene061085.t1.exon1;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19139933 | 19139995 | 19139933 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| chr1.4 | exon | 19140101 | 19140148 | 19140101 | ID=MS.gene061085.t1.exon2;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19140101 | 19140148 | 19140101 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| chr1.4 | exon | 19140264 | 19140359 | 19140264 | ID=MS.gene061085.t1.exon3;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19140264 | 19140359 | 19140264 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| chr1.4 | exon | 19140466 | 19140543 | 19140466 | ID=MS.gene061085.t1.exon4;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19140466 | 19140543 | 19140466 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| chr1.4 | exon | 19140797 | 19140969 | 19140797 | ID=MS.gene061085.t1.exon5;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19140797 | 19140969 | 19140797 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| chr1.4 | exon | 19141049 | 19141103 | 19141049 | ID=MS.gene061085.t1.exon6;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19141049 | 19141103 | 19141049 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| chr1.4 | exon | 19141293 | 19141341 | 19141293 | ID=MS.gene061085.t1.exon7;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19141293 | 19141341 | 19141293 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| chr1.4 | exon | 19141492 | 19141589 | 19141492 | ID=MS.gene061085.t1.exon8;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19141492 | 19141589 | 19141492 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| chr1.4 | exon | 19142666 | 19142743 | 19142666 | ID=MS.gene061085.t1.exon9;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19142666 | 19142743 | 19142666 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| chr1.4 | exon | 19143765 | 19143890 | 19143765 | ID=MS.gene061085.t1.exon10;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19143765 | 19143890 | 19143765 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| chr1.4 | exon | 19145707 | 19145772 | 19145707 | ID=MS.gene061085.t1.exon11;Parent=MS.gene061085.t1 |
| chr1.4 | CDS | 19145707 | 19145772 | 19145707 | ID=cds.MS.gene061085.t1;Parent=MS.gene061085.t1 |
| Gene Sequence |
| Protein sequence |
