Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21416.t1 | XP_013469288.1 | 91.1 | 506 | 45 | 0 | 26 | 531 | 1 | 506 | 3.50E-258 | 900.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21416.t1 | Q9MA55 | 42.9 | 499 | 270 | 4 | 37 | 528 | 168 | 658 | 3.0e-117 | 423.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21416.t1 | A0A072VNX4 | 91.1 | 506 | 45 | 0 | 26 | 531 | 1 | 506 | 2.5e-258 | 900.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049143 | MS.gene21416 | 0.813757 | 2.18E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene21416 | 0.803876 | 2.83E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene21416 | 0.840659 | 7.61E-58 | -1.69E-46 |
| MS.gene050359 | MS.gene21416 | 0.804145 | 2.49E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene21416 | 0.883756 | 3.43E-71 | -1.69E-46 |
| MS.gene051234 | MS.gene21416 | 0.839398 | 1.62E-57 | -1.69E-46 |
| MS.gene051381 | MS.gene21416 | 0.802603 | 5.19E-49 | -1.69E-46 |
| MS.gene051642 | MS.gene21416 | 0.854456 | 1.22E-61 | -1.69E-46 |
| MS.gene051746 | MS.gene21416 | 0.800079 | 1.71E-48 | -1.69E-46 |
| MS.gene051748 | MS.gene21416 | 0.81277 | 3.59E-51 | -1.69E-46 |
| MS.gene051850 | MS.gene21416 | 0.842669 | 2.25E-58 | -1.69E-46 |
| MS.gene051885 | MS.gene21416 | 0.833286 | 5.82E-56 | -1.69E-46 |
| MS.gene052148 | MS.gene21416 | 0.805706 | 1.17E-49 | -1.69E-46 |
| MS.gene05224 | MS.gene21416 | 0.813349 | 2.68E-51 | -1.69E-46 |
| MS.gene052335 | MS.gene21416 | 0.825347 | 4.92E-54 | -1.69E-46 |
| MS.gene052609 | MS.gene21416 | 0.810699 | 1.01E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene21416 | 0.828357 | 9.40E-55 | -1.69E-46 |
| MS.gene055469 | MS.gene21416 | 0.816057 | 6.73E-52 | -1.69E-46 |
| MS.gene056075 | MS.gene21416 | 0.802653 | 5.07E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene21416 | 0.830709 | 2.52E-55 | -1.69E-46 |
| MS.gene058638 | MS.gene21416 | 0.819608 | 1.06E-52 | -1.69E-46 |
| MS.gene058639 | MS.gene21416 | 0.822891 | 1.86E-53 | -1.69E-46 |
| MS.gene058720 | MS.gene21416 | 0.829545 | 4.85E-55 | -1.69E-46 |
| MS.gene058758 | MS.gene21416 | 0.805652 | 1.20E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene21416 | 0.805445 | 1.33E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene21416 | 0.851519 | 8.42E-61 | -1.69E-46 |
| MS.gene059227 | MS.gene21416 | 0.80839 | 3.17E-50 | -1.69E-46 |
| MS.gene060465 | MS.gene21416 | 0.805088 | 1.58E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene21416 | 0.831052 | 2.08E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21416.t1 | MTR_1g090740 | 96.838 | 506 | 16 | 0 | 26 | 531 | 1 | 506 | 0.0 | 1023 |
| MS.gene21416.t1 | MTR_7g113200 | 44.311 | 501 | 254 | 5 | 37 | 528 | 171 | 655 | 4.47e-154 | 455 |
| MS.gene21416.t1 | MTR_7g113200 | 52.244 | 312 | 143 | 1 | 37 | 348 | 171 | 476 | 5.74e-121 | 364 |
| MS.gene21416.t1 | MTR_4g119100 | 37.261 | 314 | 194 | 1 | 38 | 351 | 82 | 392 | 7.67e-67 | 229 |
| MS.gene21416.t1 | MTR_4g119100 | 37.261 | 314 | 194 | 1 | 38 | 351 | 82 | 392 | 9.16e-67 | 229 |
| MS.gene21416.t1 | MTR_4g119100 | 37.261 | 314 | 194 | 1 | 38 | 351 | 81 | 391 | 9.75e-67 | 229 |
| MS.gene21416.t1 | MTR_2g019860 | 34.891 | 321 | 206 | 1 | 38 | 358 | 74 | 391 | 6.29e-65 | 224 |
| MS.gene21416.t1 | MTR_2g019860 | 25.000 | 292 | 175 | 11 | 67 | 339 | 1 | 267 | 3.29e-11 | 66.2 |
| MS.gene21416.t1 | MTR_1g084120 | 29.814 | 322 | 203 | 10 | 40 | 356 | 15 | 318 | 1.80e-35 | 140 |
| MS.gene21416.t1 | MTR_4g109680 | 27.574 | 272 | 166 | 9 | 47 | 304 | 19 | 273 | 1.22e-27 | 117 |
| MS.gene21416.t1 | MTR_4g109680 | 29.070 | 258 | 162 | 5 | 40 | 288 | 65 | 310 | 2.79e-25 | 110 |
| MS.gene21416.t1 | MTR_4g109680 | 25.221 | 226 | 132 | 5 | 40 | 247 | 115 | 321 | 2.64e-15 | 79.3 |
| MS.gene21416.t1 | MTR_4g132120 | 30.769 | 143 | 97 | 2 | 145 | 286 | 315 | 456 | 1.60e-15 | 80.5 |
| MS.gene21416.t1 | MTR_4g132120 | 26.540 | 211 | 138 | 6 | 48 | 256 | 331 | 526 | 1.60e-13 | 73.9 |
| MS.gene21416.t1 | MTR_4g132120 | 23.569 | 297 | 202 | 9 | 54 | 338 | 279 | 562 | 6.10e-12 | 68.9 |
| MS.gene21416.t1 | MTR_1g492850 | 25.740 | 338 | 220 | 12 | 47 | 367 | 14 | 337 | 1.89e-15 | 79.3 |
| MS.gene21416.t1 | MTR_1g492850 | 25.664 | 339 | 219 | 12 | 47 | 367 | 14 | 337 | 2.16e-15 | 79.3 |
| MS.gene21416.t1 | MTR_2g036510 | 30.303 | 231 | 140 | 10 | 122 | 339 | 249 | 471 | 2.97e-15 | 79.0 |
| MS.gene21416.t1 | MTR_2g036510 | 25.378 | 331 | 200 | 18 | 40 | 342 | 283 | 594 | 1.64e-11 | 67.4 |
| MS.gene21416.t1 | MTR_2g069030 | 24.901 | 253 | 166 | 10 | 113 | 351 | 20 | 262 | 3.16e-14 | 74.3 |
| MS.gene21416.t1 | MTR_2g069030 | 24.803 | 254 | 160 | 9 | 3 | 238 | 70 | 310 | 3.13e-11 | 65.1 |
| MS.gene21416.t1 | MTR_8g105590 | 26.829 | 205 | 141 | 5 | 140 | 339 | 291 | 491 | 4.86e-14 | 75.5 |
| MS.gene21416.t1 | MTR_8g105590 | 25.767 | 326 | 205 | 14 | 40 | 342 | 303 | 614 | 3.51e-12 | 69.3 |
| MS.gene21416.t1 | MTR_1g492850 | 28.372 | 215 | 128 | 6 | 40 | 240 | 9 | 211 | 4.33e-12 | 68.6 |
| MS.gene21416.t1 | MTR_2g087530 | 26.238 | 202 | 132 | 4 | 104 | 301 | 119 | 307 | 2.14e-11 | 67.4 |
| MS.gene21416.t1 | MTR_1g089370 | 25.926 | 189 | 131 | 3 | 114 | 293 | 43 | 231 | 5.48e-11 | 65.9 |
| MS.gene21416.t1 | MTR_1g107265 | 24.464 | 233 | 125 | 9 | 56 | 254 | 128 | 343 | 9.01e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21416.t1 | AT5G04420 | 60.465 | 516 | 192 | 4 | 20 | 527 | 2 | 513 | 0.0 | 623 |
| MS.gene21416.t1 | AT5G04420 | 60.465 | 516 | 192 | 4 | 20 | 527 | 2 | 513 | 0.0 | 623 |
| MS.gene21416.t1 | AT5G04420 | 60.465 | 516 | 192 | 4 | 20 | 527 | 2 | 513 | 0.0 | 623 |
| MS.gene21416.t1 | AT3G05420 | 45.491 | 499 | 257 | 4 | 37 | 528 | 169 | 659 | 1.01e-158 | 468 |
| MS.gene21416.t1 | AT3G05420 | 45.491 | 499 | 257 | 4 | 37 | 528 | 168 | 658 | 1.27e-158 | 467 |
| MS.gene21416.t1 | AT5G27630 | 44.200 | 500 | 265 | 4 | 37 | 528 | 169 | 662 | 7.79e-155 | 457 |
| MS.gene21416.t1 | AT5G27630 | 44.309 | 492 | 262 | 3 | 37 | 528 | 169 | 648 | 1.35e-152 | 451 |
| MS.gene21416.t1 | AT5G27630 | 44.512 | 492 | 255 | 4 | 37 | 528 | 169 | 642 | 3.78e-152 | 450 |
| MS.gene21416.t1 | AT5G27630 | 46.400 | 375 | 192 | 2 | 37 | 403 | 169 | 542 | 2.70e-123 | 374 |
| MS.gene21416.t1 | AT5G18590 | 34.132 | 334 | 210 | 2 | 22 | 348 | 41 | 371 | 7.35e-59 | 207 |
| MS.gene21416.t1 | AT5G18590 | 29.545 | 132 | 78 | 4 | 21 | 148 | 206 | 326 | 1.83e-11 | 67.4 |
| MS.gene21416.t1 | AT5G18590 | 34.132 | 334 | 210 | 2 | 22 | 348 | 41 | 371 | 7.35e-59 | 207 |
| MS.gene21416.t1 | AT5G18590 | 29.545 | 132 | 78 | 4 | 21 | 148 | 206 | 326 | 1.83e-11 | 67.4 |
| MS.gene21416.t1 | AT1G18610 | 25.706 | 354 | 222 | 10 | 31 | 356 | 3 | 343 | 3.92e-28 | 118 |
| MS.gene21416.t1 | AT1G18610 | 25.706 | 354 | 222 | 10 | 31 | 356 | 3 | 343 | 3.92e-28 | 118 |
| MS.gene21416.t1 | AT1G74150 | 30.000 | 260 | 159 | 6 | 40 | 289 | 62 | 308 | 1.65e-26 | 114 |
| MS.gene21416.t1 | AT1G74150 | 25.464 | 377 | 203 | 11 | 116 | 430 | 24 | 384 | 1.58e-22 | 101 |
| MS.gene21416.t1 | AT1G74150 | 30.000 | 260 | 159 | 6 | 40 | 289 | 46 | 292 | 1.69e-26 | 113 |
| MS.gene21416.t1 | AT1G74150 | 22.910 | 323 | 224 | 9 | 117 | 430 | 62 | 368 | 1.61e-19 | 92.4 |
| MS.gene21416.t1 | AT1G74150 | 25.541 | 231 | 150 | 6 | 28 | 247 | 83 | 302 | 3.88e-15 | 78.6 |
| MS.gene21416.t1 | AT1G74150 | 30.000 | 260 | 159 | 6 | 40 | 289 | 62 | 308 | 1.89e-26 | 113 |
| MS.gene21416.t1 | AT1G74150 | 25.464 | 377 | 203 | 11 | 116 | 430 | 24 | 384 | 1.55e-22 | 101 |
| MS.gene21416.t1 | AT1G74150 | 30.000 | 260 | 159 | 6 | 40 | 289 | 62 | 308 | 2.01e-26 | 113 |
| MS.gene21416.t1 | AT1G74150 | 25.464 | 377 | 202 | 11 | 116 | 430 | 24 | 383 | 4.76e-22 | 100 |
| MS.gene21416.t1 | AT2G36360 | 25.175 | 286 | 167 | 9 | 50 | 317 | 74 | 330 | 3.81e-19 | 90.9 |
| MS.gene21416.t1 | AT2G36360 | 23.501 | 417 | 268 | 13 | 46 | 433 | 13 | 407 | 4.29e-16 | 81.3 |
| MS.gene21416.t1 | AT2G36360 | 25.175 | 286 | 167 | 9 | 50 | 317 | 74 | 330 | 3.81e-19 | 90.9 |
| MS.gene21416.t1 | AT2G36360 | 23.501 | 417 | 268 | 13 | 46 | 433 | 13 | 407 | 4.29e-16 | 81.3 |
| MS.gene21416.t1 | AT2G36360 | 25.175 | 286 | 167 | 9 | 50 | 317 | 74 | 330 | 4.07e-19 | 90.9 |
| MS.gene21416.t1 | AT2G36360 | 23.206 | 418 | 275 | 13 | 46 | 433 | 13 | 414 | 1.00e-16 | 83.6 |
| MS.gene21416.t1 | AT2G36360 | 25.175 | 286 | 167 | 9 | 50 | 317 | 74 | 330 | 5.02e-19 | 90.5 |
| MS.gene21416.t1 | AT2G36360 | 23.501 | 417 | 268 | 13 | 46 | 433 | 13 | 407 | 6.49e-16 | 80.9 |
| MS.gene21416.t1 | AT2G36360 | 26.316 | 285 | 174 | 9 | 50 | 317 | 74 | 339 | 3.87e-18 | 87.8 |
| MS.gene21416.t1 | AT2G36360 | 23.239 | 426 | 274 | 13 | 46 | 433 | 13 | 423 | 6.27e-16 | 80.9 |
| MS.gene21416.t1 | AT2G36360 | 27.928 | 222 | 135 | 6 | 39 | 247 | 122 | 331 | 3.07e-12 | 69.3 |
| MS.gene21416.t1 | AT5G57360 | 31.868 | 182 | 114 | 6 | 131 | 304 | 259 | 438 | 2.24e-15 | 79.7 |
| MS.gene21416.t1 | AT5G57360 | 31.351 | 185 | 111 | 6 | 131 | 304 | 259 | 438 | 2.40e-15 | 79.3 |
| MS.gene21416.t1 | AT1G74150 | 36.170 | 141 | 83 | 4 | 157 | 292 | 7 | 145 | 5.22e-15 | 77.4 |
| MS.gene21416.t1 | AT1G74150 | 22.078 | 231 | 163 | 6 | 203 | 430 | 2 | 218 | 1.18e-11 | 67.0 |
| MS.gene21416.t1 | AT1G74150 | 36.170 | 141 | 83 | 4 | 157 | 292 | 7 | 145 | 5.22e-15 | 77.4 |
| MS.gene21416.t1 | AT1G74150 | 22.078 | 231 | 163 | 6 | 203 | 430 | 2 | 218 | 1.18e-11 | 67.0 |
| MS.gene21416.t1 | AT4G04670 | 24.303 | 251 | 184 | 3 | 92 | 338 | 303 | 551 | 5.51e-15 | 78.6 |
| MS.gene21416.t1 | AT4G04670 | 26.214 | 206 | 137 | 5 | 50 | 254 | 322 | 513 | 1.72e-13 | 73.9 |
| MS.gene21416.t1 | AT4G04670 | 25.000 | 212 | 142 | 5 | 31 | 240 | 354 | 550 | 8.65e-12 | 68.6 |
| MS.gene21416.t1 | AT1G68050 | 28.846 | 208 | 133 | 8 | 140 | 339 | 280 | 480 | 1.82e-14 | 76.6 |
| MS.gene21416.t1 | AT1G68050 | 26.462 | 325 | 199 | 17 | 40 | 342 | 292 | 598 | 1.66e-12 | 70.5 |
| MS.gene21416.t1 | AT2G18915 | 29.018 | 224 | 141 | 11 | 140 | 351 | 259 | 476 | 1.01e-13 | 74.3 |
| MS.gene21416.t1 | AT2G18915 | 26.061 | 330 | 197 | 17 | 40 | 342 | 271 | 580 | 7.54e-12 | 68.6 |
| MS.gene21416.t1 | AT2G18915 | 29.018 | 224 | 141 | 11 | 140 | 351 | 269 | 486 | 1.18e-13 | 73.9 |
| MS.gene21416.t1 | AT2G18915 | 26.061 | 330 | 197 | 17 | 40 | 342 | 281 | 590 | 8.12e-12 | 68.2 |
| MS.gene21416.t1 | AT1G08420 | 26.217 | 267 | 176 | 7 | 42 | 301 | 76 | 328 | 9.59e-12 | 68.6 |
| MS.gene21416.t1 | AT1G08420 | 26.217 | 267 | 176 | 7 | 42 | 301 | 76 | 328 | 1.19e-11 | 68.2 |
| MS.gene21416.t1 | AT3G07720 | 25.949 | 158 | 115 | 2 | 113 | 269 | 22 | 178 | 1.80e-11 | 65.9 |
| MS.gene21416.t1 | AT2G27210 | 25.758 | 264 | 175 | 6 | 45 | 301 | 68 | 317 | 2.01e-11 | 67.4 |
| MS.gene21416.t1 | AT1G03445 | 24.597 | 248 | 165 | 6 | 81 | 310 | 5 | 248 | 2.10e-11 | 67.0 |
| MS.gene21416.t1 | AT1G03445 | 24.597 | 248 | 165 | 6 | 81 | 310 | 5 | 248 | 2.16e-11 | 67.0 |
| MS.gene21416.t1 | AT2G27210 | 25.758 | 264 | 175 | 6 | 45 | 301 | 68 | 317 | 2.21e-11 | 67.4 |
| MS.gene21416.t1 | AT5G48180 | 24.815 | 270 | 147 | 11 | 38 | 256 | 6 | 270 | 4.92e-11 | 64.7 |
Find 124 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAACTTACATATGATAAT+TGG | 0.170068 | 1.4:-71976705 | MS.gene21416:CDS |
| TAAAGAAGAAAAGAGATTAT+TGG | 0.213591 | 1.4:-71971492 | MS.gene21416:CDS |
| ATGTTTAAGACCAGGGTTTC+AGG | 0.262450 | 1.4:+71973388 | None:intergenic |
| TTTGGAGTTATTAAGACTTC+TGG | 0.268335 | 1.4:-71975713 | MS.gene21416:CDS |
| GAAACATATCTGTTTGCTTT+TGG | 0.282847 | 1.4:-71972626 | MS.gene21416:CDS |
| TGGGTACCTATTACTGTAAC+TGG | 0.320335 | 1.4:-71976685 | MS.gene21416:CDS |
| TCACAGTTTGCAAGTCTAAT+AGG | 0.321039 | 1.4:+71974994 | None:intergenic |
| GACACTTCTGATACTTTAAC+AGG | 0.331485 | 1.4:-71975957 | MS.gene21416:intron |
| CGTGCACCAGTTACAGTAAT+AGG | 0.336930 | 1.4:+71976679 | None:intergenic |
| CAAAACTGACCAAACAAGTT+TGG | 0.344354 | 1.4:+71973363 | None:intergenic |
| GGCAGAGTTCTGGTGGAGTT+TGG | 0.359921 | 1.4:-71971029 | MS.gene21416:CDS |
| AATCCCAAGTCATCTGTAAA+TGG | 0.361389 | 1.4:-71971554 | MS.gene21416:CDS |
| GACATTGAAACATGCCAGTT+TGG | 0.363748 | 1.4:-71975731 | MS.gene21416:CDS |
| TAAACATGTCCAAACTTGTT+TGG | 0.371790 | 1.4:-71973372 | MS.gene21416:CDS |
| TGCCACATCTGGTCACAATA+TGG | 0.375410 | 1.4:-71976168 | MS.gene21416:intron |
| CGCAAAGTGTCCTTTGCCTT+GGG | 0.375746 | 1.4:+71971686 | None:intergenic |
| GAGTTTGGCGATTGTTTGGT+GGG | 0.378516 | 1.4:-71971014 | MS.gene21416:CDS |
| GAAGTTGGATTTCATGCAAC+TGG | 0.379660 | 1.4:-71971585 | MS.gene21416:CDS |
| TAAGACTTCTGGAAGTGTTC+CGG | 0.385440 | 1.4:-71975702 | MS.gene21416:intron |
| CTAAAGCTAAAAGCTGATAC+TGG | 0.386047 | 1.4:-71976227 | MS.gene21416:CDS |
| GGGGAGAAACTACTTATTCT+TGG | 0.386469 | 1.4:-71975993 | MS.gene21416:CDS |
| TTATTCTTGGTGGCAGTTCA+AGG | 0.395862 | 1.4:-71975980 | MS.gene21416:CDS |
| GCTGATACTGGAAAAGATAA+TGG | 0.398474 | 1.4:-71976215 | MS.gene21416:CDS |
| CGGCTGCAGCAGCCGGTGAC+TGG | 0.402128 | 1.4:+71971651 | None:intergenic |
| TCGGCATTTATCGGATGTTC+AGG | 0.402211 | 1.4:-71976354 | MS.gene21416:intron |
| GCTGCAGCGGCTGCAGCAGC+CGG | 0.404210 | 1.4:+71971644 | None:intergenic |
| TATTGTTTGCTGGTGAAGAT+AGG | 0.410603 | 1.4:-71975286 | MS.gene21416:CDS |
| ACTGCTCAGAGGCAGAGTTC+TGG | 0.411453 | 1.4:-71971039 | MS.gene21416:CDS |
| TCGTAATGGTCGGCATTTAT+CGG | 0.414181 | 1.4:-71976363 | MS.gene21416:CDS |
| GAGAATCTGCCTGCCACATC+TGG | 0.415971 | 1.4:-71976179 | MS.gene21416:CDS |
| ACGCAAAGTGTCCTTTGCCT+TGG | 0.417692 | 1.4:+71971685 | None:intergenic |
| TCAAGAGTTATATTGTTTGC+TGG | 0.420352 | 1.4:-71975296 | MS.gene21416:CDS |
| ACGCCCACCTGCTCGCTATA+AGG | 0.422960 | 1.4:-71976659 | MS.gene21416:intron |
| AGCCGGTGACTGGAAAATCT+TGG | 0.427490 | 1.4:+71971661 | None:intergenic |
| CGTACTGCAACAGGTATTCC+TGG | 0.431125 | 1.4:-71976772 | MS.gene21416:CDS |
| AAGGTGATCCGTACTGCAAC+AGG | 0.436476 | 1.4:-71976781 | MS.gene21416:CDS |
| TTGCAGCGTGCTCCATCTCC+TGG | 0.437877 | 1.4:+71971061 | None:intergenic |
| AAAGGAGAATCAGAGAGAAA+TGG | 0.438995 | 1.4:-71976746 | MS.gene21416:CDS |
| ATCACCTTGATTGTCACTTC+AGG | 0.439632 | 1.4:+71976796 | None:intergenic |
| GAGAAATGGAAGTCAACAAT+TGG | 0.443435 | 1.4:-71976732 | MS.gene21416:CDS |
| CAAGTTGTCCCTGGACTGAT+TGG | 0.447114 | 1.4:+71971294 | None:intergenic |
| GGTGGAGTTTGGCGATTGTT+TGG | 0.453020 | 1.4:-71971018 | MS.gene21416:CDS |
| AGAACTTACATATGATAATT+GGG | 0.453526 | 1.4:-71976704 | MS.gene21416:CDS |
| AAATGTCAATTACAGAAGTC+AGG | 0.454664 | 1.4:-71971469 | MS.gene21416:CDS |
| GCCGAAAATTCTAAGCTTGA+AGG | 0.454809 | 1.4:-71971446 | MS.gene21416:CDS |
| AATGCAGTCTGTGGAAGATC+AGG | 0.457540 | 1.4:-71971118 | MS.gene21416:CDS |
| GCAGCTGCATGATCATATCT+AGG | 0.458106 | 1.4:+71975086 | None:intergenic |
| AAGTCTTAATAACTCCAAAC+TGG | 0.461734 | 1.4:+71975717 | None:intergenic |
| ATTGTCTAAATCTGAGAAGT+TGG | 0.468518 | 1.4:-71971600 | MS.gene21416:CDS |
| GCCGGTGACTGGAAAATCTT+GGG | 0.471683 | 1.4:+71971662 | None:intergenic |
| TGTTTAAGACCAGGGTTTCA+GGG | 0.480013 | 1.4:+71973389 | None:intergenic |
| GTCTGCTCAGGACTGATTGA+TGG | 0.482697 | 1.4:-71972650 | MS.gene21416:CDS |
| AACAGGTTGCCCTGAAACCC+TGG | 0.483820 | 1.4:-71973398 | MS.gene21416:intron |
| GATACCAGCATGTCCAGCCC+TGG | 0.484536 | 1.4:+71973874 | None:intergenic |
| AACAGGTATTCCTGGACAAA+AGG | 0.485327 | 1.4:-71976764 | MS.gene21416:CDS |
| GGAAATTTCTGCAGATTAGG+TGG | 0.485711 | 1.4:-71976016 | MS.gene21416:intron |
| CTCATTTGGTTCAGATGGAA+TGG | 0.487551 | 1.4:-71973931 | MS.gene21416:intron |
| GTAATTACCTCGCTAGAAAG+TGG | 0.490290 | 1.4:+71973319 | None:intergenic |
| ATGACCATTTACAGATGACT+TGG | 0.490751 | 1.4:+71971550 | None:intergenic |
| AAGATCAGGTACAGGCTCTT+CGG | 0.491991 | 1.4:-71971104 | MS.gene21416:CDS |
| TCTCCCAGGGCTGGACATGC+TGG | 0.492069 | 1.4:-71973878 | MS.gene21416:CDS |
| GAAATTTCTGCAGATTAGGT+GGG | 0.494691 | 1.4:-71976015 | MS.gene21416:intron |
| GGAGTTTGGCGATTGTTTGG+TGG | 0.494775 | 1.4:-71971015 | MS.gene21416:CDS |
| GATCATGCAGCTGCTATACA+TGG | 0.499932 | 1.4:-71975077 | MS.gene21416:CDS |
| AATCACCTTGAGATTGTGGT+TGG | 0.503457 | 1.4:+71973906 | None:intergenic |
| GTTTGGCGATTGTTTGGTGG+GGG | 0.504587 | 1.4:-71971012 | MS.gene21416:CDS |
| TCAGGAACTCCAATCAGTCC+AGG | 0.506726 | 1.4:-71971303 | MS.gene21416:intron |
| ACTAAATCACCTTGAGATTG+TGG | 0.509422 | 1.4:+71973902 | None:intergenic |
| TCTCTGCCACAAGTTGTCCC+TGG | 0.512332 | 1.4:+71971285 | None:intergenic |
| TATTCTTGGTGGCAGTTCAA+GGG | 0.512969 | 1.4:-71975979 | MS.gene21416:CDS |
| GCATGATCATATCTAGGAGC+TGG | 0.514015 | 1.4:+71975092 | None:intergenic |
| GTATCACTATTGATGAAAGC+TGG | 0.523890 | 1.4:-71973856 | MS.gene21416:CDS |
| AGTTTGGCGATTGTTTGGTG+GGG | 0.526991 | 1.4:-71971013 | MS.gene21416:CDS |
| TCGATCTTGAAAGTATGACT+TGG | 0.528585 | 1.4:-71975232 | MS.gene21416:CDS |
| CAGGGTCTTAGTGTCTGCTC+AGG | 0.535901 | 1.4:-71972662 | MS.gene21416:CDS |
| AAATAAACCTTATAGCGAGC+AGG | 0.536488 | 1.4:+71976652 | None:intergenic |
| ATCACCTTGAGATTGTGGTT+GGG | 0.539244 | 1.4:+71973907 | None:intergenic |
| GTCTGTGGAAGATCAGGTAC+AGG | 0.541261 | 1.4:-71971112 | MS.gene21416:CDS |
| ATCAGTCCAGGGACAACTTG+TGG | 0.541539 | 1.4:-71971291 | MS.gene21416:CDS |
| TGTGGGACAGTCTGCAACAC+TGG | 0.541663 | 1.4:-71975324 | MS.gene21416:CDS |
| CGATCTTGAAAGTATGACTT+GGG | 0.542678 | 1.4:-71975231 | MS.gene21416:CDS |
| GATGAAAGCTGGTTCATAGT+TGG | 0.544589 | 1.4:-71973845 | MS.gene21416:CDS |
| AGATAATGGCAACAGTTCAC+AGG | 0.549134 | 1.4:-71976201 | MS.gene21416:CDS |
| TTGCTGGTGAAGATAGGAGA+AGG | 0.550729 | 1.4:-71975280 | MS.gene21416:CDS |
| AGAAAGAACACATACAATCA+TGG | 0.551221 | 1.4:+71976909 | None:intergenic |
| GATTTAGTATCTCCCAGGGC+TGG | 0.552233 | 1.4:-71973887 | MS.gene21416:CDS |
| GCTCAGAGGCAGAGTTCTGG+TGG | 0.555117 | 1.4:-71971036 | MS.gene21416:CDS |
| AAGGTGATTTAGTATCTCCC+AGG | 0.560391 | 1.4:-71973892 | MS.gene21416:CDS |
| TAAACCTTATAGCGAGCAGG+TGG | 0.560664 | 1.4:+71976655 | None:intergenic |
| TACCATATTGTGACCAGATG+TGG | 0.565247 | 1.4:+71976166 | None:intergenic |
| ATAGCCTGAAGTGACAATCA+AGG | 0.566294 | 1.4:-71976800 | MS.gene21416:intron |
| CAGGAATACCTGTTGCAGTA+CGG | 0.572254 | 1.4:+71976773 | None:intergenic |
| GTTTGGACATGTTTAAGACC+AGG | 0.574500 | 1.4:+71973380 | None:intergenic |
| TTTGGACATGTTTAAGACCA+GGG | 0.578998 | 1.4:+71973381 | None:intergenic |
| TACTTTCAAGATCGAGAACA+TGG | 0.582402 | 1.4:+71975240 | None:intergenic |
| GAGAAACTACTTATTCTTGG+TGG | 0.583851 | 1.4:-71975990 | MS.gene21416:CDS |
| AAATTTCTGCAGATTAGGTG+GGG | 0.587248 | 1.4:-71976014 | MS.gene21416:intron |
| GAGATCAAGATGCTTTAACC+TGG | 0.590072 | 1.4:-71971264 | MS.gene21416:CDS |
| TGACCATTTACAGATGACTT+GGG | 0.592947 | 1.4:+71971551 | None:intergenic |
| ATACCAGCATGTCCAGCCCT+GGG | 0.596393 | 1.4:+71973875 | None:intergenic |
| GTGTTGCAGACTGTCCCACA+CGG | 0.598021 | 1.4:+71975327 | None:intergenic |
| AATTTCTGCAGATTAGGTGG+GGG | 0.598354 | 1.4:-71976013 | MS.gene21416:intron |
| AGAAGAAACAGAAGCTGCAG+CGG | 0.605486 | 1.4:+71971631 | None:intergenic |
| AGCTGGTTCATAGTTGGTGG+TGG | 0.606040 | 1.4:-71973839 | MS.gene21416:CDS |
| CAGGAACTCCAATCAGTCCA+GGG | 0.608949 | 1.4:-71971302 | MS.gene21416:CDS |
| AAAAGATCCACTTTCTAGCG+AGG | 0.614138 | 1.4:-71973326 | MS.gene21416:intron |
| AATGTCAATTACAGAAGTCA+GGG | 0.616808 | 1.4:-71971468 | MS.gene21416:CDS |
| TCGGTGGAAGTCGTAATGGT+CGG | 0.620312 | 1.4:-71976373 | MS.gene21416:CDS |
| ATATTGTGACCAGATGTGGC+AGG | 0.620813 | 1.4:+71976170 | None:intergenic |
| GGACAGTCTGCAACACTGGT+TGG | 0.620957 | 1.4:-71975320 | MS.gene21416:CDS |
| AGCACGCTGCAACTGCTCAG+AGG | 0.621810 | 1.4:-71971050 | MS.gene21416:CDS |
| ATTTCTGCAGATTAGGTGGG+GGG | 0.621981 | 1.4:-71976012 | MS.gene21416:intron |
| TGATCATATCTAGGAGCTGG+AGG | 0.627693 | 1.4:+71975095 | None:intergenic |
| ATCAAGATGCTTTAACCTGG+AGG | 0.628173 | 1.4:-71971261 | MS.gene21416:intron |
| TGGTCCCAACCACAATCTCA+AGG | 0.633536 | 1.4:-71973911 | MS.gene21416:CDS |
| GAAAGCTGGTTCATAGTTGG+TGG | 0.644690 | 1.4:-71973842 | MS.gene21416:CDS |
| GTTGGAATCAATGCAGTCTG+TGG | 0.657663 | 1.4:-71971127 | MS.gene21416:CDS |
| TTGACTTCAGAAGTTTGACG+TGG | 0.660815 | 1.4:-71976256 | MS.gene21416:CDS |
| CAATGGGAGGTATAGCAATG+AGG | 0.666121 | 1.4:-71972597 | MS.gene21416:intron |
| AGGTGATTTAGTATCTCCCA+GGG | 0.668848 | 1.4:-71973891 | MS.gene21416:CDS |
| CAGCTGCTATACATGGAGAA+CGG | 0.673496 | 1.4:-71975070 | MS.gene21416:CDS |
| TGTTGCAGACTGTCCCACAC+GGG | 0.680353 | 1.4:+71975328 | None:intergenic |
| TAATCATGCTGAATTGACCA+AGG | 0.683981 | 1.4:-71971402 | MS.gene21416:intron |
| AAACCTTATAGCGAGCAGGT+GGG | 0.714483 | 1.4:+71976656 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAATTTTATTCAATAAC+AGG | + | chr1.4:71974683-71974702 | None:intergenic | 10.0% |
| !!! | TCTTATTGAATTATATTTTT+AGG | - | chr1.4:71972440-71972459 | MS.gene21416:intron | 10.0% |
| !! | TTATTGAATTCAAGTAAATT+AGG | - | chr1.4:71975500-71975519 | MS.gene21416:intron | 15.0% |
| !!! | AAACTATATTTTGCAATTTA+GGG | + | chr1.4:71974345-71974364 | None:intergenic | 15.0% |
| !!! | AACAAAGATTCTTTTTATTT+TGG | - | chr1.4:71975408-71975427 | MS.gene21416:intron | 15.0% |
| !!! | ATTAAATCAAAGTACTAATA+AGG | - | chr1.4:71972972-71972991 | MS.gene21416:intron | 15.0% |
| !!! | GATGAAAAATTATACATTTT+CGG | - | chr1.4:71971517-71971536 | MS.gene21416:CDS | 15.0% |
| !!! | TTATGTTTTTATTAATATGG+AGG | - | chr1.4:71974632-71974651 | MS.gene21416:intron | 15.0% |
| !!! | TTTTAAATACTACTTTCTTT+GGG | - | chr1.4:71971809-71971828 | MS.gene21416:intron | 15.0% |
| !!! | TTTTGATTTATTTTGAGATT+TGG | - | chr1.4:71971872-71971891 | MS.gene21416:intron | 15.0% |
| !! | AAAATAAATCAAAATCCAGA+TGG | + | chr1.4:71971866-71971885 | None:intergenic | 20.0% |
| !! | AACTATCCATTAAAAAAATG+TGG | - | chr1.4:71972498-71972517 | MS.gene21416:intron | 20.0% |
| !! | AAGAACTTACATATGATAAT+TGG | - | chr1.4:71971204-71971223 | MS.gene21416:intron | 20.0% |
| !! | AAGTAGATAATCAATCAAAA+TGG | - | chr1.4:71975119-71975138 | MS.gene21416:intron | 20.0% |
| !! | ACATATAAATCAATATGCAA+AGG | + | chr1.4:71975205-71975224 | None:intergenic | 20.0% |
| !! | ACCTAATTTGAAAGTTTAAA+AGG | + | chr1.4:71973840-71973859 | None:intergenic | 20.0% |
| !! | ACTATCCATTAAAAAAATGT+GGG | - | chr1.4:71972499-71972518 | MS.gene21416:intron | 20.0% |
| !! | ACTTCAAGCTATAAAATTAA+TGG | + | chr1.4:71972242-71972261 | None:intergenic | 20.0% |
| !! | AGAACTTACATATGATAATT+GGG | - | chr1.4:71971205-71971224 | MS.gene21416:intron | 20.0% |
| !! | AGTAGATAATCAATCAAAAT+GGG | - | chr1.4:71975120-71975139 | MS.gene21416:intron | 20.0% |
| !! | ATGAGGAATTGTTTAATAAA+AGG | + | chr1.4:71974903-71974922 | None:intergenic | 20.0% |
| !! | ATTATATCATGCAAATTGAT+TGG | - | chr1.4:71975993-71976012 | MS.gene21416:CDS | 20.0% |
| !! | ATTTCCTTTACAAACTAAAT+TGG | + | chr1.4:71975544-71975563 | None:intergenic | 20.0% |
| !! | CAATTACAAAATTAAAACGA+AGG | - | chr1.4:71971327-71971346 | MS.gene21416:intron | 20.0% |
| !! | CATATAAATCAATATGCAAA+GGG | + | chr1.4:71975204-71975223 | None:intergenic | 20.0% |
| !! | TAAAGAAGAAAAGAGATTAT+TGG | - | chr1.4:71976417-71976436 | MS.gene21416:intron | 20.0% |
| !! | TCCTCTAATAAAATAAGAAA+AGG | + | chr1.4:71971297-71971316 | None:intergenic | 20.0% |
| !! | TCCTGAAAATACATATTTAA+CGG | + | chr1.4:71976592-71976611 | None:intergenic | 20.0% |
| !! | TTATATCATGCAAATTGATT+GGG | - | chr1.4:71975994-71976013 | MS.gene21416:CDS | 20.0% |
| !! | TTATGGTTCATTTAGAAATA+AGG | + | chr1.4:71974372-71974391 | None:intergenic | 20.0% |
| !! | TTTGAAGATAAAAAATAGAC+AGG | - | chr1.4:71975047-71975066 | MS.gene21416:CDS | 20.0% |
| !!! | AAAAATTAAGAGTATGAGAT+TGG | + | chr1.4:71972302-71972321 | None:intergenic | 20.0% |
| !!! | AAAACAACTTTTAAGATCAA+CGG | + | chr1.4:71973908-71973927 | None:intergenic | 20.0% |
| !!! | AATAAGAAAAAGTACGATAA+AGG | + | chr1.4:71972427-71972446 | None:intergenic | 20.0% |
| !!! | ACATTTTTTTAATGGATAGT+TGG | + | chr1.4:71972499-71972518 | None:intergenic | 20.0% |
| !!! | AGAAAAAACTATTTTGTGTA+TGG | + | chr1.4:71973073-71973092 | None:intergenic | 20.0% |
| !!! | ATTCTTTTTATTTTGGTAGA+TGG | - | chr1.4:71975415-71975434 | MS.gene21416:intron | 20.0% |
| !!! | CAAACTATATTTTGCAATTT+AGG | + | chr1.4:71974346-71974365 | None:intergenic | 20.0% |
| !!! | GATTATATGATTTTTGAAAC+AGG | - | chr1.4:71974494-71974513 | MS.gene21416:intron | 20.0% |
| !!! | GTTTTAAATACTACTTTCTT+TGG | - | chr1.4:71971808-71971827 | MS.gene21416:intron | 20.0% |
| !!! | TAAGTTTTCATTACTTATCA+GGG | - | chr1.4:71975229-71975248 | MS.gene21416:CDS | 20.0% |
| !!! | TAATCTCTTTTCTTCTTTAA+TGG | + | chr1.4:71976416-71976435 | None:intergenic | 20.0% |
| !!! | TATTAACACTGATTAAGATT+AGG | - | chr1.4:71975894-71975913 | MS.gene21416:intron | 20.0% |
| !!! | TCCTTTTAAACTTTCAAATT+AGG | - | chr1.4:71973836-71973855 | MS.gene21416:CDS | 20.0% |
| !!! | TCCTTTTCTTATTTTATTAG+AGG | - | chr1.4:71971293-71971312 | MS.gene21416:CDS | 20.0% |
| !!! | TGTTTTTAGTCTATTTTTCT+AGG | - | chr1.4:71972555-71972574 | MS.gene21416:intron | 20.0% |
| !!! | TTTCTTATTTTATTAGAGGA+TGG | - | chr1.4:71971297-71971316 | MS.gene21416:CDS | 20.0% |
| ! | AATAAACTTCTTACAAGGAA+GGG | - | chr1.4:71974390-71974409 | MS.gene21416:intron | 25.0% |
| ! | AATAAATGACAAAAACTGAG+GGG | + | chr1.4:71973526-71973545 | None:intergenic | 25.0% |
| ! | AATAAGAAAAGGAGAAAGAT+AGG | + | chr1.4:71971286-71971305 | None:intergenic | 25.0% |
| ! | ACCATAATAAACTTCTTACA+AGG | - | chr1.4:71974385-71974404 | MS.gene21416:intron | 25.0% |
| ! | AGAAATCAATTTGTCATTCT+TGG | - | chr1.4:71971408-71971427 | MS.gene21416:CDS | 25.0% |
| ! | AGAATAAATGACAAAAACTG+AGG | + | chr1.4:71973528-71973547 | None:intergenic | 25.0% |
| ! | ATAAATCCTTTAAATCTACC+TGG | + | chr1.4:71974939-71974958 | None:intergenic | 25.0% |
| ! | ATAAGAAAAGGAGAAAGATA+GGG | + | chr1.4:71971285-71971304 | None:intergenic | 25.0% |
| ! | ATATATATATCATTCCTGCA+AGG | - | chr1.4:71974719-71974738 | MS.gene21416:intron | 25.0% |
| ! | ATGTTTCATTGGAAACATAA+TGG | - | chr1.4:71973747-71973766 | MS.gene21416:intron | 25.0% |
| ! | CAAAAGGTTAAAATAAGTGT+AGG | + | chr1.4:71973671-71973690 | None:intergenic | 25.0% |
| ! | GAATAAATGACAAAAACTGA+GGG | + | chr1.4:71973527-71973546 | None:intergenic | 25.0% |
| ! | GCATCAATTATTATCCAAAT+AGG | - | chr1.4:71975946-71975965 | MS.gene21416:intron | 25.0% |
| ! | GTAGATAATCAATCAAAATG+GGG | - | chr1.4:71975121-71975140 | MS.gene21416:intron | 25.0% |
| ! | TAATAAACTTCTTACAAGGA+AGG | - | chr1.4:71974389-71974408 | MS.gene21416:intron | 25.0% |
| ! | TAGATAATCAATCAAAATGG+GGG | - | chr1.4:71975122-71975141 | MS.gene21416:intron | 25.0% |
| ! | TATATATATCATTCCTGCAA+GGG | - | chr1.4:71974720-71974739 | MS.gene21416:intron | 25.0% |
| ! | TCCTTGTAAGAAGTTTATTA+TGG | + | chr1.4:71974389-71974408 | None:intergenic | 25.0% |
| ! | TCTTTGTAATAGTCAATGTT+GGG | - | chr1.4:71975683-71975702 | MS.gene21416:intron | 25.0% |
| ! | TGAAAATTCACAATGTTCAT+TGG | - | chr1.4:71972133-71972152 | MS.gene21416:intron | 25.0% |
| ! | TTCAAATATCAGCATATGAA+AGG | + | chr1.4:71973720-71973739 | None:intergenic | 25.0% |
| ! | TTCTTTGTAATAGTCAATGT+TGG | - | chr1.4:71975682-71975701 | MS.gene21416:intron | 25.0% |
| !! | AAAACTATTTTGTGTATGGA+TGG | + | chr1.4:71973069-71973088 | None:intergenic | 25.0% |
| !! | AATTTTTCTTACTGAAAACC+TGG | - | chr1.4:71972315-71972334 | MS.gene21416:intron | 25.0% |
| !! | ACCGTTAAATATGTATTTTC+AGG | - | chr1.4:71976588-71976607 | MS.gene21416:intron | 25.0% |
| !! | AGATCTCTAAAGATAATAGT+TGG | + | chr1.4:71973697-71973716 | None:intergenic | 25.0% |
| !! | CTATTTGTGTTTGTTAACAT+TGG | - | chr1.4:71975593-71975612 | MS.gene21416:intron | 25.0% |
| !! | GAAAAATTATACATTTTCGG+TGG | - | chr1.4:71971520-71971539 | MS.gene21416:CDS | 25.0% |
| !! | GTAAGTTTTCATTACTTATC+AGG | - | chr1.4:71975228-71975247 | MS.gene21416:CDS | 25.0% |
| !! | TAGTTTGTAAAGGAAATCAT+TGG | - | chr1.4:71975547-71975566 | MS.gene21416:intron | 25.0% |
| !! | TTCTAAAAATGCACATAAAG+TGG | + | chr1.4:71974177-71974196 | None:intergenic | 25.0% |
| !! | TTTTATTCAATAACAGGTCT+TGG | + | chr1.4:71974677-71974696 | None:intergenic | 25.0% |
| !!! | CAATGAAACTATGTTTTTTG+TGG | - | chr1.4:71974465-71974484 | MS.gene21416:intron | 25.0% |
| !!! | CAGTTTTTGTCATTTATTCT+TGG | - | chr1.4:71973528-71973547 | MS.gene21416:intron | 25.0% |
| !!! | CATGAAAAATGCTTTAGTTT+TGG | - | chr1.4:71973882-71973901 | MS.gene21416:CDS | 25.0% |
| !!! | TAAAGCATTAACACATTTTC+TGG | + | chr1.4:71972744-71972763 | None:intergenic | 25.0% |
| !!! | TTTTTGGAGTTCTGTAATTT+TGG | + | chr1.4:71976760-71976779 | None:intergenic | 25.0% |
| AAAAAACCACTTCTGTGTAT+GGG | + | chr1.4:71973104-71973123 | None:intergenic | 30.0% | |
| AAAAAGGACTGTAGAATTCA+AGG | - | chr1.4:71973166-71973185 | MS.gene21416:intron | 30.0% | |
| AAAGTTCCAGGTAGATTTAA+AGG | - | chr1.4:71974930-71974949 | MS.gene21416:intron | 30.0% | |
| AAATCCAATCCAAAATGCAA+CGG | + | chr1.4:71974848-71974867 | None:intergenic | 30.0% | |
| AAATGTCAATTACAGAAGTC+AGG | - | chr1.4:71976440-71976459 | MS.gene21416:intron | 30.0% | |
| AAATTAATGGTCACACTTAC+CGG | + | chr1.4:71972229-71972248 | None:intergenic | 30.0% | |
| AAGTCTTAATAACTCCAAAC+TGG | + | chr1.4:71972195-71972214 | None:intergenic | 30.0% | |
| AATGTCAATTACAGAAGTCA+GGG | - | chr1.4:71976441-71976460 | MS.gene21416:intron | 30.0% | |
| ACATGTAATTCATGATTGGT+TGG | - | chr1.4:71971353-71971372 | MS.gene21416:intron | 30.0% | |
| AGATGTATCTTCTACAACTT+CGG | + | chr1.4:71974815-71974834 | None:intergenic | 30.0% | |
| AGATTAAGAGTGAAGATATC+TGG | - | chr1.4:71975807-71975826 | MS.gene21416:intron | 30.0% | |
| ATAAACTTCTTACAAGGAAG+GGG | - | chr1.4:71974391-71974410 | MS.gene21416:intron | 30.0% | |
| ATAAATGACAAAAACTGAGG+GGG | + | chr1.4:71973525-71973544 | None:intergenic | 30.0% | |
| ATAACTATAGGAATCTGAGT+TGG | - | chr1.4:71973219-71973238 | MS.gene21416:intron | 30.0% | |
| ATATAGCTTGATGTATGCAT+AGG | + | chr1.4:71974441-71974460 | None:intergenic | 30.0% | |
| ATATATATCATTCCTGCAAG+GGG | - | chr1.4:71974721-71974740 | MS.gene21416:intron | 30.0% | |
| ATGGAGATTGATGAAATACT+TGG | - | chr1.4:71975467-71975486 | MS.gene21416:intron | 30.0% | |
| ATTGTCTAAATCTGAGAAGT+TGG | - | chr1.4:71976309-71976328 | MS.gene21416:intron | 30.0% | |
| CATTGGAAACATAATGGTTA+TGG | - | chr1.4:71973753-71973772 | MS.gene21416:intron | 30.0% | |
| CCATAGTTAACTTCAAAGAT+GGG | + | chr1.4:71976688-71976707 | None:intergenic | 30.0% | |
| CCTATCAAAATTCAAGAAAG+TGG | + | chr1.4:71972788-71972807 | None:intergenic | 30.0% | |
| CTATGGATTTATAGTTGTGT+AGG | - | chr1.4:71976702-71976721 | MS.gene21416:CDS | 30.0% | |
| CTATTACAAAGAATAACCAC+CGG | + | chr1.4:71975675-71975694 | None:intergenic | 30.0% | |
| CTCAATCCAAATATATCAGA+GGG | - | chr1.4:71974310-71974329 | MS.gene21416:intron | 30.0% | |
| CTGATATATTTGGATTGAGA+AGG | + | chr1.4:71974309-71974328 | None:intergenic | 30.0% | |
| GATAAAGGATGTAAACAGAA+CGG | + | chr1.4:71972412-71972431 | None:intergenic | 30.0% | |
| GATGATCTAACAATCTCATT+TGG | - | chr1.4:71973964-71973983 | MS.gene21416:intron | 30.0% | |
| GCATACATGTAATTCATGAT+TGG | - | chr1.4:71971349-71971368 | MS.gene21416:intron | 30.0% | |
| TAAAAAACCACTTCTGTGTA+TGG | + | chr1.4:71973105-71973124 | None:intergenic | 30.0% | |
| TACAGAACTCCAAAAATTGT+TGG | - | chr1.4:71976764-71976783 | MS.gene21416:CDS | 30.0% | |
| TACATGATTTAGTTGTTTGC+AGG | - | chr1.4:71971627-71971646 | MS.gene21416:CDS | 30.0% | |
| TATATCATTTCGTCATCGAT+TGG | - | chr1.4:71973595-71973614 | MS.gene21416:intron | 30.0% | |
| TATTCTGTTTGAAGACTACA+TGG | - | chr1.4:71973424-71973443 | MS.gene21416:intron | 30.0% | |
| TCAAGAGTTATATTGTTTGC+TGG | - | chr1.4:71972613-71972632 | MS.gene21416:CDS | 30.0% | |
| TCATATGCTGATATTTGAAG+TGG | - | chr1.4:71973721-71973740 | MS.gene21416:intron | 30.0% | |
| TCCATAGTTAACTTCAAAGA+TGG | + | chr1.4:71976689-71976708 | None:intergenic | 30.0% | |
| TCTCAATCCAAATATATCAG+AGG | - | chr1.4:71974309-71974328 | MS.gene21416:intron | 30.0% | |
| TGTGTAGGATTTAAGTATAC+AGG | - | chr1.4:71976717-71976736 | MS.gene21416:CDS | 30.0% | |
| TTAATGCTAATAAAACCCAG+TGG | - | chr1.4:71975924-71975943 | MS.gene21416:intron | 30.0% | |
| TTGTTAGATCATCACATTGT+TGG | + | chr1.4:71973957-71973976 | None:intergenic | 30.0% | |
| TTTAAATCTACCTGGAACTT+TGG | + | chr1.4:71974931-71974950 | None:intergenic | 30.0% | |
| TTTGGAAATTTCTGCAGATT+AGG | - | chr1.4:71971890-71971909 | MS.gene21416:intron | 30.0% | |
| ! | AAAAAACCTTTCTTAGCCTT+GGG | - | chr1.4:71971440-71971459 | MS.gene21416:CDS | 30.0% |
| ! | ACACTGATTAAGATTAGGAT+TGG | - | chr1.4:71975899-71975918 | MS.gene21416:intron | 30.0% |
| ! | ACCTTCAAGCTTAGAATTTT+CGG | + | chr1.4:71976467-71976486 | None:intergenic | 30.0% |
| ! | ATATCATTTCGTCATCGATT+GGG | - | chr1.4:71973596-71973615 | MS.gene21416:intron | 30.0% |
| ! | CATGTAATTCATGATTGGTT+GGG | - | chr1.4:71971354-71971373 | MS.gene21416:intron | 30.0% |
| ! | TAAACATGTCCAAACTTGTT+TGG | - | chr1.4:71974537-71974556 | MS.gene21416:intron | 30.0% |
| ! | TTTGGAGTTATTAAGACTTC+TGG | - | chr1.4:71972196-71972215 | MS.gene21416:intron | 30.0% |
| !! | AGATAATAGTTGGTGTCAAA+AGG | + | chr1.4:71973687-71973706 | None:intergenic | 30.0% |
| !! | ATAAGGTTGTTTCTTCTATC+TGG | - | chr1.4:71972989-71973008 | MS.gene21416:intron | 30.0% |
| !! | ATTAGCTTTGAAACTTGACT+TGG | - | chr1.4:71975618-71975637 | MS.gene21416:intron | 30.0% |
| !! | CCACTTTCTTGAATTTTGAT+AGG | - | chr1.4:71972785-71972804 | MS.gene21416:intron | 30.0% |
| !! | GAGTCCAATTTAGTTTGTAA+AGG | - | chr1.4:71975537-71975556 | MS.gene21416:intron | 30.0% |
| !! | TAAGGTTGTTTCTTCTATCT+GGG | - | chr1.4:71972990-71973009 | MS.gene21416:intron | 30.0% |
| !! | TGACATTTTGACAACACAAA+TGG | + | chr1.4:71975389-71975408 | None:intergenic | 30.0% |
| !! | TTTTTGCTTTTGTGGAAATC+AGG | + | chr1.4:71975723-71975742 | None:intergenic | 30.0% |
| !!! | GCATTGATTCCAACAATTTT+TGG | + | chr1.4:71976776-71976795 | None:intergenic | 30.0% |
| !!! | GTGTGTTTTTTGTTTGGTTA+TGG | - | chr1.4:71972273-71972292 | MS.gene21416:intron | 30.0% |
| !!! | TGACTCCCACATTTTTTTAA+TGG | + | chr1.4:71972507-71972526 | None:intergenic | 30.0% |
| AAAGCAAAAACCTAGTGTTG+TGG | - | chr1.4:71975733-71975752 | MS.gene21416:CDS | 35.0% | |
| AAAGGAGAATCAGAGAGAAA+TGG | - | chr1.4:71971163-71971182 | MS.gene21416:intron | 35.0% | |
| AAATAAACCTTATAGCGAGC+AGG | + | chr1.4:71971260-71971279 | None:intergenic | 35.0% | |
| AAATTGGACTCGTGTTATAG+TGG | + | chr1.4:71975528-71975547 | None:intergenic | 35.0% | |
| AAATTTCTGCAGATTAGGTG+GGG | - | chr1.4:71971895-71971914 | MS.gene21416:intron | 35.0% | |
| AACAGAATAGTACAGACTCT+TGG | + | chr1.4:71973413-71973432 | None:intergenic | 35.0% | |
| AACTTCGGTAATGACTAATG+AGG | + | chr1.4:71974800-71974819 | None:intergenic | 35.0% | |
| AATAGGAAGCTAGTGAGATA+AGG | - | chr1.4:71975963-71975982 | MS.gene21416:CDS | 35.0% | |
| AATCCCAAGTCATCTGTAAA+TGG | - | chr1.4:71976355-71976374 | MS.gene21416:CDS | 35.0% | |
| ACAGAATAGTACAGACTCTT+GGG | + | chr1.4:71973412-71973431 | None:intergenic | 35.0% | |
| ACTAAATCACCTTGAGATTG+TGG | + | chr1.4:71974010-71974029 | None:intergenic | 35.0% | |
| ACTAGCAAGTTCAGAATTTG+TGG | + | chr1.4:71976092-71976111 | None:intergenic | 35.0% | |
| ACTTCGGTAATGACTAATGA+GGG | + | chr1.4:71974799-71974818 | None:intergenic | 35.0% | |
| AGCAACCACCAAAAATCATA+AGG | + | chr1.4:71972867-71972886 | None:intergenic | 35.0% | |
| AGTAGGGACTGTGTAAATTT+AGG | - | chr1.4:71976186-71976205 | MS.gene21416:CDS | 35.0% | |
| AGTGTACACTCAGAAGAAAA+AGG | - | chr1.4:71973150-71973169 | MS.gene21416:intron | 35.0% | |
| ATGACCATTTACAGATGACT+TGG | + | chr1.4:71976362-71976381 | None:intergenic | 35.0% | |
| CAAAAAACCTTTCTTAGCCT+TGG | - | chr1.4:71971439-71971458 | MS.gene21416:CDS | 35.0% | |
| CAAAACTGACCAAACAAGTT+TGG | + | chr1.4:71974549-71974568 | None:intergenic | 35.0% | |
| CATGAATCAATAAACCCCAT+TGG | + | chr1.4:71972350-71972369 | None:intergenic | 35.0% | |
| CATGTAACTAACACTTGTAG+CGG | - | chr1.4:71972366-71972385 | MS.gene21416:intron | 35.0% | |
| CTAAAGCTAAAAGCTGATAC+TGG | - | chr1.4:71971682-71971701 | MS.gene21416:CDS | 35.0% | |
| GAAATTTCTGCAGATTAGGT+GGG | - | chr1.4:71971894-71971913 | MS.gene21416:intron | 35.0% | |
| GAATCTCATTCCAATCATCT+TGG | - | chr1.4:71974869-71974888 | MS.gene21416:intron | 35.0% | |
| GACACTTCTGATACTTTAAC+AGG | - | chr1.4:71971952-71971971 | MS.gene21416:intron | 35.0% | |
| GAGAAACTACTTATTCTTGG+TGG | - | chr1.4:71971919-71971938 | MS.gene21416:intron | 35.0% | |
| GAGAAATGGAAGTCAACAAT+TGG | - | chr1.4:71971177-71971196 | MS.gene21416:intron | 35.0% | |
| GCGATAATATGAAAGGAAGT+AGG | - | chr1.4:71975073-71975092 | MS.gene21416:CDS | 35.0% | |
| GCTGATACTGGAAAAGATAA+TGG | - | chr1.4:71971694-71971713 | MS.gene21416:CDS | 35.0% | |
| GGATAATAATTGATGCCACT+GGG | + | chr1.4:71975942-71975961 | None:intergenic | 35.0% | |
| GTATCACTATTGATGAAAGC+TGG | - | chr1.4:71974053-71974072 | MS.gene21416:intron | 35.0% | |
| GTGCATAGCATATTATAGCA+TGG | - | chr1.4:71972100-71972119 | MS.gene21416:intron | 35.0% | |
| GTTTCTGTGATTGATGAGTA+GGG | - | chr1.4:71976170-71976189 | MS.gene21416:CDS | 35.0% | |
| TAATCAGAAGGTCTCAATGT+GGG | + | chr1.4:71974766-71974785 | None:intergenic | 35.0% | |
| TAATCATGCTGAATTGACCA+AGG | - | chr1.4:71976507-71976526 | MS.gene21416:intron | 35.0% | |
| TACAGGTAATGTTTGTTTCC+AGG | - | chr1.4:71976734-71976753 | MS.gene21416:CDS | 35.0% | |
| TACTGAAAACCTGGTTTACA+AGG | - | chr1.4:71972324-71972343 | MS.gene21416:intron | 35.0% | |
| TACTTTCAAGATCGAGAACA+TGG | + | chr1.4:71972672-71972691 | None:intergenic | 35.0% | |
| TATATATCATTCCTGCAAGG+GGG | - | chr1.4:71974722-71974741 | MS.gene21416:intron | 35.0% | |
| TATCTTCAAAGTTGCCCTTT+GGG | + | chr1.4:71975037-71975056 | None:intergenic | 35.0% | |
| TCAAGTCGTAATACATACCT+TGG | + | chr1.4:71976527-71976546 | None:intergenic | 35.0% | |
| TCACAGTTTGCAAGTCTAAT+AGG | + | chr1.4:71972918-71972937 | None:intergenic | 35.0% | |
| TGAAGTGGAACATGTTTCAT+TGG | - | chr1.4:71973736-71973755 | MS.gene21416:intron | 35.0% | |
| TGACCATTTACAGATGACTT+GGG | + | chr1.4:71976361-71976380 | None:intergenic | 35.0% | |
| TGAGTGTACACTTGGATAAT+GGG | + | chr1.4:71973142-71973161 | None:intergenic | 35.0% | |
| TGCTGTGATAGCATAACTAT+AGG | - | chr1.4:71973207-71973226 | MS.gene21416:intron | 35.0% | |
| TGGAATAAGAATATGACCCA+AGG | + | chr1.4:71971459-71971478 | None:intergenic | 35.0% | |
| TGGATAATAATTGATGCCAC+TGG | + | chr1.4:71975943-71975962 | None:intergenic | 35.0% | |
| TTATCGGATGTTCAGGTATA+TGG | - | chr1.4:71971562-71971581 | MS.gene21416:CDS | 35.0% | |
| TTATCTTCAAAGTTGCCCTT+TGG | + | chr1.4:71975038-71975057 | None:intergenic | 35.0% | |
| TTGTCTGTACTTTCATTCCA+TGG | + | chr1.4:71973807-71973826 | None:intergenic | 35.0% | |
| ! | ACAATCTCATTTGGTTCAGA+TGG | - | chr1.4:71973973-71973992 | MS.gene21416:intron | 35.0% |
| ! | CGATCTTGAAAGTATGACTT+GGG | - | chr1.4:71972678-71972697 | MS.gene21416:intron | 35.0% |
| ! | GAACGGTACCTTATGATTTT+TGG | - | chr1.4:71972856-71972875 | MS.gene21416:intron | 35.0% |
| ! | TATCTCACTAGCTTCCTATT+TGG | + | chr1.4:71975963-71975982 | None:intergenic | 35.0% |
| ! | TATTGTTTGCTGGTGAAGAT+AGG | - | chr1.4:71972623-71972642 | MS.gene21416:CDS | 35.0% |
| ! | TCGATCTTGAAAGTATGACT+TGG | - | chr1.4:71972677-71972696 | MS.gene21416:intron | 35.0% |
| ! | TTGTGTTTAAAGTTTCACGC+AGG | + | chr1.4:71974235-71974254 | None:intergenic | 35.0% |
| ! | TTTGGACATGTTTAAGACCA+GGG | + | chr1.4:71974531-71974550 | None:intergenic | 35.0% |
| ! | TTTTCTTCTGAGTGTACACT+TGG | + | chr1.4:71973150-71973169 | None:intergenic | 35.0% |
| !! | AAGGTTGTTTCTTCTATCTG+GGG | - | chr1.4:71972991-71973010 | MS.gene21416:intron | 35.0% |
| !! | ACACTAGGTTTTTGCTTTTG+TGG | + | chr1.4:71975731-71975750 | None:intergenic | 35.0% |
| !! | ATTTTGATCTCCACAACACT+AGG | + | chr1.4:71975746-71975765 | None:intergenic | 35.0% |
| !! | CCCATCTTTGAAGTTAACTA+TGG | - | chr1.4:71976685-71976704 | MS.gene21416:CDS | 35.0% |
| !! | GAAAGTGAATTTTAACCTCC+AGG | + | chr1.4:71976666-71976685 | None:intergenic | 35.0% |
| !!! | CTTGACTTGGATAATTTTGC+TGG | - | chr1.4:71975631-71975650 | MS.gene21416:intron | 35.0% |
| !!! | GATTAGTTTCCGTTGCATTT+TGG | - | chr1.4:71974836-71974855 | MS.gene21416:intron | 35.0% |
| AAAAATGACTCCCTCTGTGT+AGG | - | chr1.4:71974280-71974299 | MS.gene21416:intron | 40.0% | |
| AACAGGTATTCCTGGACAAA+AGG | - | chr1.4:71971145-71971164 | MS.gene21416:CDS | 40.0% | |
| AAGGTGATTTAGTATCTCCC+AGG | - | chr1.4:71974017-71974036 | MS.gene21416:intron | 40.0% | |
| AATAGTACAGACTCTTGGGT+CGG | + | chr1.4:71973408-71973427 | None:intergenic | 40.0% | |
| AATCACCTTGAGATTGTGGT+TGG | + | chr1.4:71974006-71974025 | None:intergenic | 40.0% | |
| AATTTCTGCAGATTAGGTGG+GGG | - | chr1.4:71971896-71971915 | MS.gene21416:intron | 40.0% | |
| ACAAAAAACACACCCAAGGA+TGG | + | chr1.4:71972266-71972285 | None:intergenic | 40.0% | |
| AGCATGCCAATTGCAATACA+TGG | + | chr1.4:71976060-71976079 | None:intergenic | 40.0% | |
| AGGATATGAAGAGACAAGTG+AGG | - | chr1.4:71973379-71973398 | MS.gene21416:CDS | 40.0% | |
| AGGTGATTTAGTATCTCCCA+GGG | - | chr1.4:71974018-71974037 | MS.gene21416:intron | 40.0% | |
| ATAGCCTGAAGTGACAATCA+AGG | - | chr1.4:71971109-71971128 | MS.gene21416:CDS | 40.0% | |
| ATAGCTTGAAGTTCCATCCT+TGG | - | chr1.4:71972250-71972269 | MS.gene21416:intron | 40.0% | |
| ATATGACCCAAGGCTAAGAA+AGG | + | chr1.4:71971449-71971468 | None:intergenic | 40.0% | |
| ATCAAGATGCTTTAACCTGG+AGG | - | chr1.4:71976648-71976667 | MS.gene21416:intron | 40.0% | |
| ATCACCTTGAGATTGTGGTT+GGG | + | chr1.4:71974005-71974024 | None:intergenic | 40.0% | |
| ATCTTCAAAGTTGCCCTTTG+GGG | + | chr1.4:71975036-71975055 | None:intergenic | 40.0% | |
| ATGCAGCCCTCTGATATATT+TGG | + | chr1.4:71974319-71974338 | None:intergenic | 40.0% | |
| ATGTGGGAGTCATTTGATTG+TGG | - | chr1.4:71972515-71972534 | MS.gene21416:intron | 40.0% | |
| ATGTGGGTCGAAAAAGAAAG+TGG | + | chr1.4:71974750-71974769 | None:intergenic | 40.0% | |
| CAATCACAGAAACCACTACA+TGG | + | chr1.4:71976163-71976182 | None:intergenic | 40.0% | |
| CAATTGCAATACATGGTGTC+AGG | + | chr1.4:71976053-71976072 | None:intergenic | 40.0% | |
| CAGATGGTCACTAAAACTCA+AGG | + | chr1.4:71971850-71971869 | None:intergenic | 40.0% | |
| CAGGCTAGCGATAATATGAA+AGG | - | chr1.4:71975066-71975085 | MS.gene21416:CDS | 40.0% | |
| CATCTTATGCCAAAAGAGAC+GGG | - | chr1.4:71973458-71973477 | MS.gene21416:intron | 40.0% | |
| CCAAACAAAAAACACACCCA+AGG | + | chr1.4:71972270-71972289 | None:intergenic | 40.0% | |
| CGTATGCATTCTGTTATCAC+AGG | + | chr1.4:71973259-71973278 | None:intergenic | 40.0% | |
| CTAATCAGAAGGTCTCAATG+TGG | + | chr1.4:71974767-71974786 | None:intergenic | 40.0% | |
| CTATCTTGAAGCGCAATCTA+GGG | - | chr1.4:71974257-71974276 | MS.gene21416:intron | 40.0% | |
| CTGACACCATGTATTGCAAT+TGG | - | chr1.4:71976051-71976070 | MS.gene21416:intron | 40.0% | |
| CTGAGTGTACACTTGGATAA+TGG | + | chr1.4:71973143-71973162 | None:intergenic | 40.0% | |
| CTGCAGTGAAAAACAACACA+TGG | + | chr1.4:71971479-71971498 | None:intergenic | 40.0% | |
| GAAGTTGGATTTCATGCAAC+TGG | - | chr1.4:71976324-71976343 | MS.gene21416:intron | 40.0% | |
| GACATTGAAACATGCCAGTT+TGG | - | chr1.4:71972178-71972197 | MS.gene21416:intron | 40.0% | |
| GAGATCAAGATGCTTTAACC+TGG | - | chr1.4:71976645-71976664 | MS.gene21416:intron | 40.0% | |
| GATAGCTACAACTACAAGAC+CGG | - | chr1.4:71975653-71975672 | MS.gene21416:intron | 40.0% | |
| GCATCTTATGCCAAAAGAGA+CGG | - | chr1.4:71973457-71973476 | MS.gene21416:intron | 40.0% | |
| GCCGAAAATTCTAAGCTTGA+AGG | - | chr1.4:71976463-71976482 | MS.gene21416:intron | 40.0% | |
| GGAAATTTCTGCAGATTAGG+TGG | - | chr1.4:71971893-71971912 | MS.gene21416:intron | 40.0% | |
| GGATGTTCAGGTATATGGTA+TGG | - | chr1.4:71971567-71971586 | MS.gene21416:CDS | 40.0% | |
| GGGGAGAAACTACTTATTCT+TGG | - | chr1.4:71971916-71971935 | MS.gene21416:intron | 40.0% | |
| GGTATAGCAATGAGGTATGT+AGG | - | chr1.4:71975320-71975339 | MS.gene21416:CDS | 40.0% | |
| GGTTTCTGTGATTGATGAGT+AGG | - | chr1.4:71976169-71976188 | MS.gene21416:CDS | 40.0% | |
| GTAATTACCTCGCTAGAAAG+TGG | + | chr1.4:71974593-71974612 | None:intergenic | 40.0% | |
| GTGATAACAGAATGCATACG+TGG | - | chr1.4:71973259-71973278 | MS.gene21416:intron | 40.0% | |
| TACCATATTGTGACCAGATG+TGG | + | chr1.4:71971746-71971765 | None:intergenic | 40.0% | |
| TACGAAAATACTGCCGTGTA+CGG | + | chr1.4:71973044-71973063 | None:intergenic | 40.0% | |
| TAGCTTGAAGTTCCATCCTT+GGG | - | chr1.4:71972251-71972270 | MS.gene21416:intron | 40.0% | |
| TCGTAATGGTCGGCATTTAT+CGG | - | chr1.4:71971546-71971565 | MS.gene21416:CDS | 40.0% | |
| TGCTAGCTATTGAGTTAGAG+AGG | - | chr1.4:71973551-71973570 | MS.gene21416:intron | 40.0% | |
| TGGGTACCTATTACTGTAAC+TGG | - | chr1.4:71971224-71971243 | MS.gene21416:intron | 40.0% | |
| TGTTTGAAGACTACATGGCT+TGG | - | chr1.4:71973429-71973448 | MS.gene21416:intron | 40.0% | |
| TTGACTTCAGAAGTTTGACG+TGG | - | chr1.4:71971653-71971672 | MS.gene21416:CDS | 40.0% | |
| TTGTGGAGATCAAAATGCTG+AGG | - | chr1.4:71975750-71975769 | MS.gene21416:intron | 40.0% | |
| ! | AAAAGATCCACTTTCTAGCG+AGG | - | chr1.4:71974583-71974602 | MS.gene21416:intron | 40.0% |
| ! | ACTATAGGAATCTGAGTTGG+TGG | - | chr1.4:71973222-71973241 | MS.gene21416:intron | 40.0% |
| ! | AGATAATGGCAACAGTTCAC+AGG | - | chr1.4:71971708-71971727 | MS.gene21416:intron | 40.0% |
| ! | ATCACCTTGATTGTCACTTC+AGG | + | chr1.4:71971116-71971135 | None:intergenic | 40.0% |
| ! | ATGGTCTTACTTCGTTTACC+TGG | - | chr1.4:71973772-71973791 | MS.gene21416:intron | 40.0% |
| ! | ATGTTTAAGACCAGGGTTTC+AGG | + | chr1.4:71974524-71974543 | None:intergenic | 40.0% |
| ! | ATTTTCGGTGGAAGTCGTAA+TGG | - | chr1.4:71971532-71971551 | MS.gene21416:CDS | 40.0% |
| ! | CTCATTTGGTTCAGATGGAA+TGG | - | chr1.4:71973978-71973997 | MS.gene21416:intron | 40.0% |
| ! | GATGAAAGCTGGTTCATAGT+TGG | - | chr1.4:71974064-71974083 | MS.gene21416:intron | 40.0% |
| ! | GTTTCCGTTGCATTTTGGAT+TGG | - | chr1.4:71974841-71974860 | MS.gene21416:intron | 40.0% |
| ! | GTTTGGACATGTTTAAGACC+AGG | + | chr1.4:71974532-71974551 | None:intergenic | 40.0% |
| ! | TATTCTTGGTGGCAGTTCAA+GGG | - | chr1.4:71971930-71971949 | MS.gene21416:intron | 40.0% |
| ! | TGTTTAAGACCAGGGTTTCA+GGG | + | chr1.4:71974523-71974542 | None:intergenic | 40.0% |
| ! | TTATTCTTGGTGGCAGTTCA+AGG | - | chr1.4:71971929-71971948 | MS.gene21416:intron | 40.0% |
| !! | AAAGAAGTCTGCTTTTGACC+AGG | - | chr1.4:71976830-71976849 | MS.gene21416:intron | 40.0% |
| !! | CGGTACCTTATGATTTTTGG+TGG | - | chr1.4:71972859-71972878 | MS.gene21416:intron | 40.0% |
| !! | CTTGAGTTTTAGTGACCATC+TGG | - | chr1.4:71971848-71971867 | MS.gene21416:intron | 40.0% |
| !! | TAAGACTTCTGGAAGTGTTC+CGG | - | chr1.4:71972207-71972226 | MS.gene21416:intron | 40.0% |
| !! | TTTTGGTGCATTCCATGTAG+TGG | - | chr1.4:71976148-71976167 | MS.gene21416:intron | 40.0% |
| !!! | CCTTGGGTGTGTTTTTTGTT+TGG | - | chr1.4:71972267-71972286 | MS.gene21416:intron | 40.0% |
| !!! | GGTTTTTGTTTTGAGACCCA+AGG | - | chr1.4:71976207-71976226 | MS.gene21416:CDS | 40.0% |
| AAACCTTATAGCGAGCAGGT+GGG | + | chr1.4:71971256-71971275 | None:intergenic | 45.0% | |
| AACAGAAATGACTGCCACCT+TGG | - | chr1.4:71974994-71975013 | MS.gene21416:intron | 45.0% | |
| AACCTGGTTTACAAGGCCAA+TGG | - | chr1.4:71972331-71972350 | MS.gene21416:intron | 45.0% | |
| AAGATCAGGTACAGGCTCTT+CGG | - | chr1.4:71976805-71976824 | MS.gene21416:intron | 45.0% | |
| AAGTTTCACGCAGGTTGCTA+AGG | + | chr1.4:71974226-71974245 | None:intergenic | 45.0% | |
| AATGCAGTCTGTGGAAGATC+AGG | - | chr1.4:71976791-71976810 | MS.gene21416:CDS | 45.0% | |
| ACAAAAACTGAGGGGGAGAA+AGG | + | chr1.4:71973518-71973537 | None:intergenic | 45.0% | |
| ACCTGGTTTACAAGGCCAAT+GGG | - | chr1.4:71972332-71972351 | MS.gene21416:intron | 45.0% | |
| ACGAAAATACTGCCGTGTAC+GGG | + | chr1.4:71973043-71973062 | None:intergenic | 45.0% | |
| AGAAGAAACAGAAGCTGCAG+CGG | + | chr1.4:71976281-71976300 | None:intergenic | 45.0% | |
| AGACAGCGAATTTACAGAGG+AGG | - | chr1.4:71973334-71973353 | MS.gene21416:CDS | 45.0% | |
| AGCGAATTTACAGAGGAGGT+TGG | - | chr1.4:71973338-71973357 | MS.gene21416:CDS | 45.0% | |
| ATATTGTGACCAGATGTGGC+AGG | + | chr1.4:71971742-71971761 | None:intergenic | 45.0% | |
| ATGTCACCCATACACAGAAG+TGG | - | chr1.4:71973095-71973114 | MS.gene21416:intron | 45.0% | |
| ATTTCTGCAGATTAGGTGGG+GGG | - | chr1.4:71971897-71971916 | MS.gene21416:intron | 45.0% | |
| CAGCTGCTATACATGGAGAA+CGG | - | chr1.4:71972839-71972858 | MS.gene21416:intron | 45.0% | |
| CAGGAATACCTGTTGCAGTA+CGG | + | chr1.4:71971139-71971158 | None:intergenic | 45.0% | |
| CCTAGATTGCGCTTCAAGAT+AGG | + | chr1.4:71974259-71974278 | None:intergenic | 45.0% | |
| CCTATCTTGAAGCGCAATCT+AGG | - | chr1.4:71974256-71974275 | MS.gene21416:intron | 45.0% | |
| CGTGCACCAGTTACAGTAAT+AGG | + | chr1.4:71971233-71971252 | None:intergenic | 45.0% | |
| GAGAGACAGCGAATTTACAG+AGG | - | chr1.4:71973331-71973350 | MS.gene21416:CDS | 45.0% | |
| GAGTTTGGCGATTGTTTGGT+GGG | - | chr1.4:71976895-71976914 | MS.gene21416:intron | 45.0% | |
| GATCATGCAGCTGCTATACA+TGG | - | chr1.4:71972832-71972851 | MS.gene21416:intron | 45.0% | |
| GCAGCTGCATGATCATATCT+AGG | + | chr1.4:71972826-71972845 | None:intergenic | 45.0% | |
| GCATGATCATATCTAGGAGC+TGG | + | chr1.4:71972820-71972839 | None:intergenic | 45.0% | |
| GCGAATTTACAGAGGAGGTT+GGG | - | chr1.4:71973339-71973358 | MS.gene21416:CDS | 45.0% | |
| GGATCGAAGTCCAAGATGAT+TGG | + | chr1.4:71974882-71974901 | None:intergenic | 45.0% | |
| GGCAAACAGAGCTAATCAGA+AGG | + | chr1.4:71974778-71974797 | None:intergenic | 45.0% | |
| GTAACTAACACTTGTAGCGG+CGG | - | chr1.4:71972369-71972388 | MS.gene21416:intron | 45.0% | |
| GTTGGAATCAATGCAGTCTG+TGG | - | chr1.4:71976782-71976801 | MS.gene21416:CDS | 45.0% | |
| TAAACCTTATAGCGAGCAGG+TGG | + | chr1.4:71971257-71971276 | None:intergenic | 45.0% | |
| TAACTAACACTTGTAGCGGC+GGG | - | chr1.4:71972370-71972389 | MS.gene21416:intron | 45.0% | |
| TCGGCATTTATCGGATGTTC+AGG | - | chr1.4:71971555-71971574 | MS.gene21416:CDS | 45.0% | |
| TGATCATATCTAGGAGCTGG+AGG | + | chr1.4:71972817-71972836 | None:intergenic | 45.0% | |
| TGCCACATCTGGTCACAATA+TGG | - | chr1.4:71971741-71971760 | MS.gene21416:intron | 45.0% | |
| TTACCTGGACACGTAATCCA+TGG | - | chr1.4:71973787-71973806 | MS.gene21416:intron | 45.0% | |
| TTCTGTATGTCACCCGTACA+CGG | - | chr1.4:71973028-71973047 | MS.gene21416:intron | 45.0% | |
| TTGCTGGTGAAGATAGGAGA+AGG | - | chr1.4:71972629-71972648 | MS.gene21416:CDS | 45.0% | |
| ! | AGTTTGGCGATTGTTTGGTG+GGG | - | chr1.4:71976896-71976915 | MS.gene21416:intron | 45.0% |
| ! | ATTCCATGGATTACGTGTCC+AGG | + | chr1.4:71973793-71973812 | None:intergenic | 45.0% |
| ! | ATTTTTCTAGGTAGCCCGTG+TGG | - | chr1.4:71972567-71972586 | MS.gene21416:intron | 45.0% |
| ! | CAATGGGAGGTATAGCAATG+AGG | - | chr1.4:71975312-71975331 | MS.gene21416:CDS | 45.0% |
| ! | CTCTGATTCTCCTTTTGTCC+AGG | + | chr1.4:71971158-71971177 | None:intergenic | 45.0% |
| ! | GAAAGCTGGTTCATAGTTGG+TGG | - | chr1.4:71974067-71974086 | MS.gene21416:intron | 45.0% |
| ! | GGTCAGATGCTGCTGAATTT+TGG | - | chr1.4:71971588-71971607 | MS.gene21416:CDS | 45.0% |
| ! | GGTGGTGGCGATAACAAAAA+TGG | - | chr1.4:71974085-71974104 | MS.gene21416:intron | 45.0% |
| ! | GTACACGGCAGTATTTTCGT+AGG | - | chr1.4:71973043-71973062 | MS.gene21416:intron | 45.0% |
| ! | TCCCAAGATTTTCCAGTCAC+CGG | - | chr1.4:71976246-71976265 | MS.gene21416:CDS | 45.0% |
| ! | TTTTTCACTGCAGCATGCAG+CGG | - | chr1.4:71971486-71971505 | MS.gene21416:CDS | 45.0% |
| ! | TTTTTCTAGGTAGCCCGTGT+GGG | - | chr1.4:71972568-71972587 | MS.gene21416:intron | 45.0% |
| !! | GGAGTTCTGTAATTTTGGCC+TGG | + | chr1.4:71976755-71976774 | None:intergenic | 45.0% |
| !! | GTGTACACTTGGATAATGGG+AGG | + | chr1.4:71973139-71973158 | None:intergenic | 45.0% |
| !!! | TGTTTTGAGACCCAAGGCAA+AGG | - | chr1.4:71976213-71976232 | MS.gene21416:CDS | 45.0% |
| !!! | ACTTTTTTTAATTAAAATTT+TGG | - | chr1.4:71976131-71976150 | MS.gene21416:intron | 5.0% |
| !!! | ATTTTATGTTTTTATTAATA+TGG | - | chr1.4:71974629-71974648 | MS.gene21416:intron | 5.0% |
| !!! | CTATAAATTAATTTTTATAA+TGG | - | chr1.4:71971982-71972001 | MS.gene21416:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTACAA+TGG | - | chr1.4:71975448-71975467 | MS.gene21416:intron | 5.0% |
| AAATGACTGCCACCTTGGAG+AGG | - | chr1.4:71974999-71975018 | MS.gene21416:CDS | 50.0% | |
| AACTAACACTTGTAGCGGCG+GGG | - | chr1.4:71972371-71972390 | MS.gene21416:intron | 50.0% | |
| AAGGTGATCCGTACTGCAAC+AGG | - | chr1.4:71971128-71971147 | MS.gene21416:CDS | 50.0% | |
| AGCCGGTGACTGGAAAATCT+TGG | + | chr1.4:71976251-71976270 | None:intergenic | 50.0% | |
| AGCTACAACTACAAGACCGG+TGG | - | chr1.4:71975656-71975675 | MS.gene21416:intron | 50.0% | |
| AGGCATAACAACAGCCCCAA+AGG | - | chr1.4:71975019-71975038 | MS.gene21416:CDS | 50.0% | |
| ATCAGTCCAGGGACAACTTG+TGG | - | chr1.4:71976618-71976637 | MS.gene21416:intron | 50.0% | |
| CAAGTTGTCCCTGGACTGAT+TGG | + | chr1.4:71976618-71976637 | None:intergenic | 50.0% | |
| CAGGAACTCCAATCAGTCCA+GGG | - | chr1.4:71976607-71976626 | MS.gene21416:intron | 50.0% | |
| CCTGGTTTACAAGGCCAATG+GGG | - | chr1.4:71972333-71972352 | MS.gene21416:intron | 50.0% | |
| CGTACTGCAACAGGTATTCC+TGG | - | chr1.4:71971137-71971156 | MS.gene21416:CDS | 50.0% | |
| CTCATGTCGACCAAAGTTCC+AGG | - | chr1.4:71974918-71974937 | MS.gene21416:intron | 50.0% | |
| CTGGAACTTTGGTCGACATG+AGG | + | chr1.4:71974920-71974939 | None:intergenic | 50.0% | |
| GAGAAGGATGCCTACACAGA+GGG | + | chr1.4:71974293-71974312 | None:intergenic | 50.0% | |
| GATTTAGTATCTCCCAGGGC+TGG | - | chr1.4:71974022-71974041 | MS.gene21416:intron | 50.0% | |
| GCCGGTGACTGGAAAATCTT+GGG | + | chr1.4:71976250-71976269 | None:intergenic | 50.0% | |
| GCTGTTGTTATGCCTCTCCA+AGG | + | chr1.4:71975014-71975033 | None:intergenic | 50.0% | |
| GGAGTTTGGCGATTGTTTGG+TGG | - | chr1.4:71976894-71976913 | MS.gene21416:intron | 50.0% | |
| GGCATAACAACAGCCCCAAA+GGG | - | chr1.4:71975020-71975039 | MS.gene21416:CDS | 50.0% | |
| GGTGGAGTTTGGCGATTGTT+TGG | - | chr1.4:71976891-71976910 | MS.gene21416:intron | 50.0% | |
| GTCTGCTCAGGACTGATTGA+TGG | - | chr1.4:71975259-71975278 | MS.gene21416:CDS | 50.0% | |
| GTCTGTGGAAGATCAGGTAC+AGG | - | chr1.4:71976797-71976816 | MS.gene21416:CDS | 50.0% | |
| GTTGTTATGCCTCTCCAAGG+TGG | + | chr1.4:71975011-71975030 | None:intergenic | 50.0% | |
| TCAGGAACTCCAATCAGTCC+AGG | - | chr1.4:71976606-71976625 | MS.gene21416:intron | 50.0% | |
| TCGGTGGAAGTCGTAATGGT+CGG | - | chr1.4:71971536-71971555 | MS.gene21416:CDS | 50.0% | |
| TGAGAAGGATGCCTACACAG+AGG | + | chr1.4:71974294-71974313 | None:intergenic | 50.0% | |
| TGGTCCCAACCACAATCTCA+AGG | - | chr1.4:71973998-71974017 | MS.gene21416:intron | 50.0% | |
| ! | ACGCAAAGTGTCCTTTGCCT+TGG | + | chr1.4:71976227-71976246 | None:intergenic | 50.0% |
| ! | CGCAAAGTGTCCTTTGCCTT+GGG | + | chr1.4:71976226-71976245 | None:intergenic | 50.0% |
| ! | CTGAACACACCCGTCTCTTT+TGG | + | chr1.4:71973470-71973489 | None:intergenic | 50.0% |
| ! | GTTTGGCGATTGTTTGGTGG+GGG | - | chr1.4:71976897-71976916 | MS.gene21416:intron | 50.0% |
| ! | TCGTCATCGATTGGGCAGTT+TGG | - | chr1.4:71973604-71973623 | MS.gene21416:intron | 50.0% |
| !! | AGCTGGTTCATAGTTGGTGG+TGG | - | chr1.4:71974070-71974089 | MS.gene21416:intron | 50.0% |
| !! | AGGTTGGGCTAGCAATGATG+GGG | - | chr1.4:71973354-71973373 | MS.gene21416:CDS | 50.0% |
| !! | GAGGTTGGGCTAGCAATGAT+GGG | - | chr1.4:71973353-71973372 | MS.gene21416:CDS | 50.0% |
| !! | GTCTGCTTTTGACCAGGAGA+TGG | - | chr1.4:71976836-71976855 | MS.gene21416:intron | 50.0% |
| AACAGGTTGCCCTGAAACCC+TGG | - | chr1.4:71974511-71974530 | MS.gene21416:intron | 55.0% | |
| ACTGCTCAGAGGCAGAGTTC+TGG | - | chr1.4:71976870-71976889 | MS.gene21416:intron | 55.0% | |
| AGAAAGTGGTTCCCCCTTGC+AGG | + | chr1.4:71974736-71974755 | None:intergenic | 55.0% | |
| ATACCAGCATGTCCAGCCCT+GGG | + | chr1.4:71974037-71974056 | None:intergenic | 55.0% | |
| CAGGGTCTTAGTGTCTGCTC+AGG | - | chr1.4:71975247-71975266 | MS.gene21416:CDS | 55.0% | |
| CGAGAGTCAACAGTGCTGCA+TGG | - | chr1.4:71974147-71974166 | MS.gene21416:intron | 55.0% | |
| GAGAATCTGCCTGCCACATC+TGG | - | chr1.4:71971730-71971749 | MS.gene21416:intron | 55.0% | |
| GGACAGTCTGCAACACTGGT+TGG | - | chr1.4:71972589-71972608 | MS.gene21416:intron | 55.0% | |
| GTGTTGCAGACTGTCCCACA+CGG | + | chr1.4:71972585-71972604 | None:intergenic | 55.0% | |
| TCTCTGCCACAAGTTGTCCC+TGG | + | chr1.4:71976627-71976646 | None:intergenic | 55.0% | |
| TGTGGGACAGTCTGCAACAC+TGG | - | chr1.4:71972585-71972604 | MS.gene21416:intron | 55.0% | |
| TGTTGCAGACTGTCCCACAC+GGG | + | chr1.4:71972584-71972603 | None:intergenic | 55.0% | |
| ! | GGCAGAGTTCTGGTGGAGTT+TGG | - | chr1.4:71976880-71976899 | MS.gene21416:intron | 55.0% |
| !! | CCCCATTGGCCTTGTAAACC+AGG | + | chr1.4:71972336-71972355 | None:intergenic | 55.0% |
| !! | GGAGGTTGGGCTAGCAATGA+TGG | - | chr1.4:71973352-71973371 | MS.gene21416:CDS | 55.0% |
| !! | GGTTGGGCTAGCAATGATGG+GGG | - | chr1.4:71973355-71973374 | MS.gene21416:CDS | 55.0% |
| AACACTTGTAGCGGCGGGGA+AGG | - | chr1.4:71972375-71972394 | MS.gene21416:intron | 60.0% | |
| ACACTTGTAGCGGCGGGGAA+GGG | - | chr1.4:71972376-71972395 | MS.gene21416:intron | 60.0% | |
| ACGCCCACCTGCTCGCTATA+AGG | - | chr1.4:71971250-71971269 | MS.gene21416:intron | 60.0% | |
| AGCACGCTGCAACTGCTCAG+AGG | - | chr1.4:71976859-71976878 | MS.gene21416:intron | 60.0% | |
| GATACCAGCATGTCCAGCCC+TGG | + | chr1.4:71974038-71974057 | None:intergenic | 60.0% | |
| TTGCAGCGTGCTCCATCTCC+TGG | + | chr1.4:71976851-71976870 | None:intergenic | 60.0% | |
| ! | GCTCAGAGGCAGAGTTCTGG+TGG | - | chr1.4:71976873-71976892 | MS.gene21416:intron | 60.0% |
| ! | GGGCTAGCAATGATGGGGGA+AGG | - | chr1.4:71973359-71973378 | MS.gene21416:CDS | 60.0% |
| TCTCCCAGGGCTGGACATGC+TGG | - | chr1.4:71974031-71974050 | MS.gene21416:intron | 65.0% | |
| TTGTAGCGGCGGGGAAGGGT+TGG | - | chr1.4:71972380-71972399 | MS.gene21416:intron | 65.0% | |
| CGGCTGCAGCAGCCGGTGAC+TGG | + | chr1.4:71976261-71976280 | None:intergenic | 75.0% | |
| GCTGCAGCGGCTGCAGCAGC+CGG | + | chr1.4:71976268-71976287 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 71971002 | 71976929 | 71971002 | ID=MS.gene21416 |
| chr1.4 | mRNA | 71971002 | 71976929 | 71971002 | ID=MS.gene21416.t1;Parent=MS.gene21416 |
| chr1.4 | exon | 71976924 | 71976929 | 71976924 | ID=MS.gene21416.t1.exon1;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71976924 | 71976929 | 71976924 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71976660 | 71976818 | 71976660 | ID=MS.gene21416.t1.exon2;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71976660 | 71976818 | 71976660 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71976355 | 71976432 | 71976355 | ID=MS.gene21416.t1.exon3;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71976355 | 71976432 | 71976355 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71976169 | 71976282 | 71976169 | ID=MS.gene21416.t1.exon4;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71976169 | 71976282 | 71976169 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71975958 | 71976024 | 71975958 | ID=MS.gene21416.t1.exon5;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71975958 | 71976024 | 71975958 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71975703 | 71975764 | 71975703 | ID=MS.gene21416.t1.exon6;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71975703 | 71975764 | 71975703 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71975215 | 71975354 | 71975215 | ID=MS.gene21416.t1.exon7;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71975215 | 71975354 | 71975215 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71974998 | 71975124 | 71974998 | ID=MS.gene21416.t1.exon8;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71974998 | 71975124 | 71974998 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71973825 | 71973939 | 71973825 | ID=MS.gene21416.t1.exon9;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71973825 | 71973939 | 71973825 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71973327 | 71973415 | 71973327 | ID=MS.gene21416.t1.exon10;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71973327 | 71973415 | 71973327 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71972598 | 71972681 | 71972598 | ID=MS.gene21416.t1.exon11;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71972598 | 71972681 | 71972598 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71971403 | 71971723 | 71971403 | ID=MS.gene21416.t1.exon12;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71971403 | 71971723 | 71971403 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71971262 | 71971321 | 71971262 | ID=MS.gene21416.t1.exon13;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71971262 | 71971321 | 71971262 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| chr1.4 | exon | 71971002 | 71971175 | 71971002 | ID=MS.gene21416.t1.exon14;Parent=MS.gene21416.t1 |
| chr1.4 | CDS | 71971002 | 71971175 | 71971002 | ID=cds.MS.gene21416.t1;Parent=MS.gene21416.t1 |
| Gene Sequence |
| Protein sequence |
