Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21551.t1 | RHN81198.1 | 89 | 657 | 42 | 3 | 1 | 627 | 76 | 732 | 1.20E-270 | 942.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21551.t1 | Q9ZVT8 | 31.8 | 737 | 383 | 17 | 1 | 623 | 89 | 819 | 2.1e-69 | 265.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21551.t1 | G7I2V7 | 89.0 | 657 | 42 | 3 | 1 | 627 | 110 | 766 | 9.0e-271 | 942.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene21551 | 0.81634 | 5.81E-52 | -1.69E-46 |
| MS.gene049190 | MS.gene21551 | 0.805092 | 1.58E-49 | -1.69E-46 |
| MS.gene049255 | MS.gene21551 | 0.831024 | 2.11E-55 | -1.69E-46 |
| MS.gene049341 | MS.gene21551 | 0.830127 | 3.50E-55 | -1.69E-46 |
| MS.gene049672 | MS.gene21551 | 0.81527 | 1.01E-51 | -1.69E-46 |
| MS.gene050020 | MS.gene21551 | 0.801632 | 8.22E-49 | -1.69E-46 |
| MS.gene05045 | MS.gene21551 | 0.803122 | 4.05E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene21551 | 0.832465 | 9.31E-56 | -1.69E-46 |
| MS.gene050815 | MS.gene21551 | 0.810861 | 9.34E-51 | -1.69E-46 |
| MS.gene051328 | MS.gene21551 | 0.832132 | 1.13E-55 | -1.69E-46 |
| MS.gene05134 | MS.gene21551 | 0.814929 | 1.20E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene21551 | 0.828548 | 8.46E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene21551 | 0.80005 | 1.73E-48 | -1.69E-46 |
| MS.gene052020 | MS.gene21551 | 0.808347 | 3.24E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene21551 | 0.80715 | 5.82E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene21551 | 0.835852 | 1.32E-56 | -1.69E-46 |
| MS.gene052612 | MS.gene21551 | 0.801202 | 1.01E-48 | -1.69E-46 |
| MS.gene052863 | MS.gene21551 | 0.80029 | 1.54E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene21551 | 0.820885 | 5.41E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene21551 | 0.849931 | 2.35E-60 | -1.69E-46 |
| MS.gene053541 | MS.gene21551 | 0.805665 | 1.20E-49 | -1.69E-46 |
| MS.gene053542 | MS.gene21551 | 0.810758 | 9.83E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene21551 | 0.80083 | 1.20E-48 | -1.69E-46 |
| MS.gene055512 | MS.gene21551 | 0.852322 | 4.98E-61 | -1.69E-46 |
| MS.gene056553 | MS.gene21551 | 0.847631 | 1.02E-59 | -1.69E-46 |
| MS.gene057140 | MS.gene21551 | 0.811662 | 6.26E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene21551 | 0.824471 | 7.93E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene21551 | 0.807405 | 5.14E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene21551 | 0.857949 | 1.15E-62 | -1.69E-46 |
| MS.gene059842 | MS.gene21551 | 0.820906 | 5.35E-53 | -1.69E-46 |
| MS.gene059937 | MS.gene21551 | 0.833904 | 4.08E-56 | -1.69E-46 |
| MS.gene060101 | MS.gene21551 | 0.802313 | 5.95E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene21551 | 0.828819 | 7.27E-55 | -1.69E-46 |
| MS.gene060587 | MS.gene21551 | 0.819049 | 1.42E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21551.t1 | MTR_1g012335 | 56.250 | 96 | 37 | 2 | 353 | 448 | 152 | 242 | 1.95e-19 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 152 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACTGATGTAAACTCTTTA+TGG | 0.161953 | 1.1:+65668825 | None:intergenic |
| CACAGATGGAGTACTTATTT+TGG | 0.170025 | 1.1:+65666078 | None:intergenic |
| ATCAAGAAGGTTGTTGATTT+AGG | 0.243477 | 1.1:-65669309 | MS.gene21551:CDS |
| CTACTGCTGCCCAAGAAATT+TGG | 0.257158 | 1.1:+65665820 | None:intergenic |
| GGACTTACTGATGAGTAATT+TGG | 0.257637 | 1.1:-65669352 | MS.gene21551:CDS |
| GTAGGACCACCATCGAATTT+AGG | 0.260424 | 1.1:-65665850 | MS.gene21551:CDS |
| CACTTCTTCCATACTCATTC+TGG | 0.283048 | 1.1:-65668152 | MS.gene21551:CDS |
| AGGATTCATGCCAAATTTCT+TGG | 0.286335 | 1.1:-65665830 | MS.gene21551:CDS |
| TACCTGCATAACCTTCTTAT+TGG | 0.286548 | 1.1:+65668331 | None:intergenic |
| CTTGCCCAAAGCCTCATTAA+AGG | 0.287064 | 1.1:+65668448 | None:intergenic |
| TATTCCCTTTAATGAGGCTT+TGG | 0.297007 | 1.1:-65668453 | MS.gene21551:CDS |
| GACTGAACATTTAACTTTGA+TGG | 0.306629 | 1.1:+65668944 | None:intergenic |
| CCTTCATCCCTTGCTTCTCA+TGG | 0.314057 | 1.1:+65665885 | None:intergenic |
| ATTACAGGGTAGAGTGAAAA+AGG | 0.314098 | 1.1:-65666290 | MS.gene21551:intron |
| GGCAAAGCGGGTGTTAAATT+AGG | 0.314606 | 1.1:-65668761 | MS.gene21551:CDS |
| CTTTGCCTCCAGAATGAGTA+TGG | 0.314804 | 1.1:+65668144 | None:intergenic |
| CCCGCTTTGCCACAAGCTTT+AGG | 0.332600 | 1.1:+65668773 | None:intergenic |
| CCACCACTCAGTTGACCTTC+TGG | 0.338744 | 1.1:+65669007 | None:intergenic |
| TTCCACCAGCTGGTTTGTCT+TGG | 0.343705 | 1.1:+65666011 | None:intergenic |
| TAGATTCTGATTTACTTTCC+TGG | 0.344878 | 1.1:+65668876 | None:intergenic |
| TCCACCAGCTGGTTTGTCTT+GGG | 0.350976 | 1.1:+65666012 | None:intergenic |
| CGCTTCAATCTTCCACCAGC+TGG | 0.354227 | 1.1:+65666001 | None:intergenic |
| ATCTCGAGCACAAGAATTGC+AGG | 0.366277 | 1.1:-65668381 | MS.gene21551:CDS |
| ATTCCCTTTAATGAGGCTTT+GGG | 0.387334 | 1.1:-65668452 | MS.gene21551:CDS |
| AAGAGTTTACATCAGTGCTT+AGG | 0.388024 | 1.1:-65668820 | MS.gene21551:CDS |
| TTTGCAGCGCTACCTCCTTC+GGG | 0.396787 | 1.1:+65668584 | None:intergenic |
| TGAAGCAATGTGGGAGTTGC+TGG | 0.403989 | 1.1:-65669062 | MS.gene21551:CDS |
| CAGTCAAGAAATGGCTGAAA+TGG | 0.412394 | 1.1:-65669280 | MS.gene21551:CDS |
| AATGTTCAGTCTGATATGAT+TGG | 0.413548 | 1.1:-65668932 | MS.gene21551:CDS |
| CATTGCTTCAGTTACTGTTA+AGG | 0.415267 | 1.1:+65669075 | None:intergenic |
| ACTGAACATTTAACTTTGAT+GGG | 0.418576 | 1.1:+65668945 | None:intergenic |
| TTGCATCAGGAGATAGAAAA+GGG | 0.421960 | 1.1:-65667944 | MS.gene21551:CDS |
| CAACACACTGAATACTTTGA+AGG | 0.424983 | 1.1:-65669202 | MS.gene21551:CDS |
| AGGTGCAAAGCTGGAATGAC+TGG | 0.426147 | 1.1:-65668355 | MS.gene21551:CDS |
| TCATGGAGCTCATTGCAATT+CGG | 0.431116 | 1.1:+65665902 | None:intergenic |
| CAACCGACCTCTCCTCTGAT+AGG | 0.432294 | 1.1:+65665957 | None:intergenic |
| TGCAGGATGAGGTGCAAAGC+TGG | 0.432702 | 1.1:-65668364 | MS.gene21551:CDS |
| AGATTCTGATTTACTTTCCT+GGG | 0.435378 | 1.1:+65668877 | None:intergenic |
| AGATAAGCTTCGCAAGCTTC+AGG | 0.443538 | 1.1:-65668306 | MS.gene21551:CDS |
| ATTCTCCTCTTCCGCTCAAA+AGG | 0.445328 | 1.1:-65668495 | MS.gene21551:CDS |
| TTGCCCAAAGCCTCATTAAA+GGG | 0.446677 | 1.1:+65668449 | None:intergenic |
| CTTGCATCAGGAGATAGAAA+AGG | 0.452299 | 1.1:-65667945 | MS.gene21551:CDS |
| ACAAAAGGAGTTAGTATAGC+AGG | 0.455522 | 1.1:-65668644 | MS.gene21551:CDS |
| TGGCTGAAATGGCCGTTTCA+AGG | 0.456420 | 1.1:-65669269 | MS.gene21551:CDS |
| GGATTCATGCCAAATTTCTT+GGG | 0.458310 | 1.1:-65665829 | MS.gene21551:CDS |
| CCTAAAGCTTGTGGCAAAGC+GGG | 0.460953 | 1.1:-65668773 | MS.gene21551:CDS |
| GCGGAAGAGGAGAATGGCTT+AGG | 0.464954 | 1.1:+65668503 | None:intergenic |
| TGCTGGTATTCCCTTTAATG+AGG | 0.474949 | 1.1:-65668459 | MS.gene21551:CDS |
| GTAGATGTTGCATCCTTTGT+GGG | 0.480943 | 1.1:+65668557 | None:intergenic |
| TTCTGATTTGGAACTTCAGA+TGG | 0.484458 | 1.1:+65668689 | None:intergenic |
| AAGGTTCAAAATTACTGTGC+TGG | 0.484913 | 1.1:-65668476 | MS.gene21551:CDS |
| AATCATCATTGGTTGAAATA+CGG | 0.485214 | 1.1:+65668615 | None:intergenic |
| AATTCCACATACCTCAGTAT+TGG | 0.485452 | 1.1:+65667907 | None:intergenic |
| AGAGATGCTCGGTGTACTCC+GGG | 0.487036 | 1.1:-65669110 | MS.gene21551:intron |
| AAAGTTAGCTAACTTGCATC+AGG | 0.490897 | 1.1:-65667957 | MS.gene21551:CDS |
| GGAAAGCTTACAAGCGTAAG+TGG | 0.494729 | 1.1:-65668740 | MS.gene21551:CDS |
| AGAGTTTACATCAGTGCTTA+GGG | 0.496266 | 1.1:-65668819 | MS.gene21551:CDS |
| TGTTCGTCCTTCTCATCCCG+TGG | 0.502489 | 1.1:+65668419 | None:intergenic |
| ACAAGCCCAGTCGTGGAAAA+CGG | 0.503942 | 1.1:-65668020 | MS.gene21551:CDS |
| AGGAGGCTACAGTCAAGAAA+TGG | 0.504693 | 1.1:-65669289 | MS.gene21551:CDS |
| AAATCTGAGACGGTGACGAC+GGG | 0.504966 | 1.1:-65666040 | MS.gene21551:CDS |
| GGGTAAAGCTGAATCATCAT+TGG | 0.505790 | 1.1:+65668604 | None:intergenic |
| CCATGAGAAGCAAGGGATGA+AGG | 0.505923 | 1.1:-65665885 | MS.gene21551:CDS |
| AGTAGATGTTGCATCCTTTG+TGG | 0.507886 | 1.1:+65668556 | None:intergenic |
| AACACACTGAATACTTTGAA+GGG | 0.509898 | 1.1:-65669201 | MS.gene21551:CDS |
| CGTGGCTCCTCAAATACAAA+AGG | 0.515636 | 1.1:-65668659 | MS.gene21551:CDS |
| TGATTTGGAACTTCAGATGG+TGG | 0.515862 | 1.1:+65668692 | None:intergenic |
| GCTGTGCTAAGACTAAAATC+TGG | 0.520602 | 1.1:-65666103 | MS.gene21551:CDS |
| AGGGTCTCCTTCTGTGTACA+AGG | 0.521448 | 1.1:+65669242 | None:intergenic |
| AAGAAGGTTGTTGATTTAGG+AGG | 0.522918 | 1.1:-65669306 | MS.gene21551:CDS |
| CACAAAACCTGATGCGCACA+TGG | 0.524231 | 1.1:+65665926 | None:intergenic |
| TGAAGATTGGAAGGATCCTA+TGG | 0.524259 | 1.1:-65669388 | None:intergenic |
| GGCAAGTTATCAACAAGCAC+TGG | 0.524731 | 1.1:-65668065 | MS.gene21551:CDS |
| ATTTGAAATACAAAGTCTGC+AGG | 0.525943 | 1.1:+65669162 | None:intergenic |
| GGCCAATAAGAAGGTTATGC+AGG | 0.527394 | 1.1:-65668333 | MS.gene21551:CDS |
| TGCTTCAGTTACTGTTAAGG+AGG | 0.527494 | 1.1:+65669078 | None:intergenic |
| TAGAGATGCTCGGTGTACTC+CGG | 0.530161 | 1.1:-65669111 | MS.gene21551:intron |
| ACTAGCTGCCTTCTTTCTGA+CGG | 0.543071 | 1.1:+65666174 | None:intergenic |
| TCGATGGTGGTCCTACATGA+AGG | 0.545025 | 1.1:+65665857 | None:intergenic |
| GGAGGATGCCGTCAGAAAGA+AGG | 0.545930 | 1.1:-65666182 | MS.gene21551:CDS |
| GTCGTTGGCTGAAAAGTCAA+TGG | 0.547386 | 1.1:-65668086 | MS.gene21551:CDS |
| CTCGAGGTTTGAAGATTGGA+AGG | 0.548193 | 1.1:-65669397 | None:intergenic |
| GAATGACTGGGCCAATAAGA+AGG | 0.549315 | 1.1:-65668342 | MS.gene21551:CDS |
| AGCTGGTGGAAGATTGAAGC+GGG | 0.553151 | 1.1:-65665999 | MS.gene21551:CDS |
| GAAGGCAGCTAGTCAACTGC+AGG | 0.553567 | 1.1:-65666164 | MS.gene21551:CDS |
| GGCTCCCAAGACAAACCAGC+TGG | 0.554984 | 1.1:-65666016 | MS.gene21551:CDS |
| GTACAAGGACTTCCTTGAAA+CGG | 0.565468 | 1.1:+65669257 | None:intergenic |
| GCTTCAGTTACTGTTAAGGA+GGG | 0.567510 | 1.1:+65669079 | None:intergenic |
| GTTTATCCCACGGGATGAGA+AGG | 0.567819 | 1.1:-65668426 | MS.gene21551:CDS |
| GGCATGAATCCTAAATTCGA+TGG | 0.569361 | 1.1:+65665841 | None:intergenic |
| AGCACAAGAATTGCAGGATG+AGG | 0.572239 | 1.1:-65668375 | MS.gene21551:CDS |
| CAGAATGAGTATGGAAGAAG+TGG | 0.572958 | 1.1:+65668153 | None:intergenic |
| TAGTCAACTGCAGGAATATG+TGG | 0.573830 | 1.1:-65666155 | MS.gene21551:CDS |
| TAGAAGAGAATGCTGAGAAG+AGG | 0.574213 | 1.1:-65668228 | MS.gene21551:CDS |
| TTTGGGCAAGTTTATCCCAC+GGG | 0.575708 | 1.1:-65668435 | MS.gene21551:CDS |
| AACAGTAACTGAAGCAATGT+GGG | 0.577399 | 1.1:-65669071 | MS.gene21551:CDS |
| CTGAATACTTTGAAGGGGAA+AGG | 0.578346 | 1.1:-65669195 | MS.gene21551:CDS |
| CTTTGGGCAAGTTTATCCCA+CGG | 0.580478 | 1.1:-65668436 | MS.gene21551:CDS |
| GTTCGTCCTTCTCATCCCGT+GGG | 0.582182 | 1.1:+65668420 | None:intergenic |
| CACCAACTCTTTCTCTAGCA+AGG | 0.583844 | 1.1:+65668117 | None:intergenic |
| ATGAAAGAACCTAAAGCTTG+TGG | 0.584438 | 1.1:-65668782 | MS.gene21551:CDS |
| TATAGTTTGGTAGAGATGCT+CGG | 0.585826 | 1.1:-65669121 | MS.gene21551:intron |
| TCCTATGGCAACTCAGCTTG+AGG | 0.585966 | 1.1:-65669373 | MS.gene21551:CDS |
| TGAAGGAATGCCCTTCATGT+AGG | 0.589860 | 1.1:-65665868 | MS.gene21551:CDS |
| CTGAACATTTAACTTTGATG+GGG | 0.589971 | 1.1:+65668946 | None:intergenic |
| CAAAATAAGTACTCCATCTG+TGG | 0.591010 | 1.1:-65666077 | MS.gene21551:CDS |
| CCAGTCGTGGAAAACGGAGT+TGG | 0.591376 | 1.1:-65668014 | MS.gene21551:CDS |
| CAGCATGGTAAAGCTAGAGA+AGG | 0.592676 | 1.1:-65666131 | MS.gene21551:CDS |
| GAAATCTGAGACGGTGACGA+CGG | 0.593570 | 1.1:-65666041 | MS.gene21551:CDS |
| ATGAGCTCCATGAGAAGCAA+GGG | 0.594437 | 1.1:-65665892 | MS.gene21551:CDS |
| AGGAAGTCCTTGTACACAGA+AGG | 0.597559 | 1.1:-65669249 | MS.gene21551:CDS |
| TCTGAGACGGTGACGACGGG+GGG | 0.600103 | 1.1:-65666037 | MS.gene21551:CDS |
| AACTTTCACAAATATCTCCC+AGG | 0.600719 | 1.1:-65668894 | MS.gene21551:CDS |
| ACACGAGTCATTTCACCAGA+AGG | 0.600907 | 1.1:-65669022 | MS.gene21551:CDS |
| TAAAGTATGCAGCCTGTGTG+AGG | 0.602168 | 1.1:+65666245 | None:intergenic |
| GTTGGTGTCTGCTAAGTCGT+TGG | 0.602233 | 1.1:-65668101 | MS.gene21551:CDS |
| CTATTCAACAAGCCCAGTCG+TGG | 0.607936 | 1.1:-65668027 | MS.gene21551:CDS |
| TGTAGACAATATTTGTGAGA+GGG | 0.609208 | 1.1:+65669223 | None:intergenic |
| CGCTGCAAAATTACCCACAA+AGG | 0.609619 | 1.1:-65668570 | MS.gene21551:CDS |
| GATTCAGCTTTACCCGAAGG+AGG | 0.610637 | 1.1:-65668596 | MS.gene21551:CDS |
| GTCCTTGCTAGAGAAAGAGT+TGG | 0.614761 | 1.1:-65668119 | MS.gene21551:CDS |
| AATGAGCTCCATGAGAAGCA+AGG | 0.618473 | 1.1:-65665893 | MS.gene21551:CDS |
| CTCTGAAGTGGAGAATGCCA+TGG | 0.618759 | 1.1:-65668203 | MS.gene21551:CDS |
| GCAGGAATATGTGGACAGCA+TGG | 0.623496 | 1.1:-65666146 | MS.gene21551:CDS |
| TGAGAAGAGGATCTCTGAAG+TGG | 0.625673 | 1.1:-65668215 | MS.gene21551:CDS |
| CGATGGTGGTCCTACATGAA+GGG | 0.627258 | 1.1:+65665858 | None:intergenic |
| AGCACTCATGAAAGCTGAGG+AGG | 0.628540 | 1.1:-65666200 | MS.gene21551:CDS |
| TCCTCAAGCTGAGTTGCCAT+AGG | 0.629481 | 1.1:+65669372 | None:intergenic |
| TCCCAAGACAAACCAGCTGG+TGG | 0.630501 | 1.1:-65666013 | MS.gene21551:CDS |
| GATGATTCAGCTTTACCCGA+AGG | 0.631923 | 1.1:-65668599 | MS.gene21551:CDS |
| ATCTGAGACGGTGACGACGG+GGG | 0.633833 | 1.1:-65666038 | MS.gene21551:CDS |
| TTCTTCCATACTCATTCTGG+AGG | 0.633921 | 1.1:-65668149 | MS.gene21551:CDS |
| ACACACTGAATACTTTGAAG+GGG | 0.634678 | 1.1:-65669200 | MS.gene21551:CDS |
| AGAAAACAAGAAATCTGAGA+CGG | 0.635352 | 1.1:-65666050 | MS.gene21551:CDS |
| ACCTAAAGCTTGTGGCAAAG+CGG | 0.636840 | 1.1:-65668774 | MS.gene21551:CDS |
| GTGCCTATCAGAGGAGAGGT+CGG | 0.640007 | 1.1:-65665960 | MS.gene21551:CDS |
| TAACAGTAACTGAAGCAATG+TGG | 0.641192 | 1.1:-65669072 | MS.gene21551:CDS |
| TGAACATTTAACTTTGATGG+GGG | 0.642090 | 1.1:+65668947 | None:intergenic |
| TGAAGCACTCATGAAAGCTG+AGG | 0.649898 | 1.1:-65666203 | MS.gene21551:CDS |
| AATCTGAGACGGTGACGACG+GGG | 0.653084 | 1.1:-65666039 | MS.gene21551:CDS |
| ATGAATCCTAAATTCGATGG+TGG | 0.659018 | 1.1:+65665844 | None:intergenic |
| TCATGTGCCTATCAGAGGAG+AGG | 0.661659 | 1.1:-65665964 | MS.gene21551:CDS |
| TTGTAGACAATATTTGTGAG+AGG | 0.662345 | 1.1:+65669222 | None:intergenic |
| GGTGCAAAGCTGGAATGACT+GGG | 0.663688 | 1.1:-65668354 | MS.gene21551:CDS |
| TAAGCTTCGCAAGCTTCAGG+CGG | 0.676302 | 1.1:-65668303 | MS.gene21551:CDS |
| CCAGAAGGTCAACTGAGTGG+TGG | 0.679750 | 1.1:-65669007 | MS.gene21551:CDS |
| TGCATCAGGAGATAGAAAAG+GGG | 0.681951 | 1.1:-65667943 | MS.gene21551:CDS |
| TCACCAGAAGGTCAACTGAG+TGG | 0.694120 | 1.1:-65669010 | MS.gene21551:CDS |
| GTGTGTCATGTGCCTATCAG+AGG | 0.697894 | 1.1:-65665969 | MS.gene21551:CDS |
| CAGCTGGTGGAAGATTGAAG+CGG | 0.698320 | 1.1:-65666000 | MS.gene21551:CDS |
| CCAAATCAGAAAATGAAACG+TGG | 0.702226 | 1.1:-65668677 | MS.gene21551:CDS |
| AAATCTTCTAGCCAATACTG+AGG | 0.732844 | 1.1:-65667918 | MS.gene21551:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATTTGACTATT+CGG | + | chr1.1:65667502-65667521 | None:intergenic | 10.0% |
| !! | TTCAAAAAAAAAAAAGTTTA+TGG | - | chr1.1:65668365-65668384 | MS.gene21551:CDS | 10.0% |
| !!! | AAACTTTTTTTTTTTTGAAA+CGG | + | chr1.1:65668364-65668383 | None:intergenic | 10.0% |
| !!! | AAATTTTTTGATTAGTTTAT+TGG | - | chr1.1:65668660-65668679 | MS.gene21551:CDS | 10.0% |
| !!! | TTTATTAGTTTACATATACA+TGG | - | chr1.1:65667772-65667791 | MS.gene21551:intron | 15.0% |
| !!! | TTTTTAGATTTACATATACA+TGG | - | chr1.1:65667517-65667536 | MS.gene21551:intron | 15.0% |
| !!! | AAAAAGTTTATGGTTTTATG+TGG | - | chr1.1:65668375-65668394 | MS.gene21551:CDS | 20.0% |
| !!! | ACTTCACAGTTTAATTTTTT+TGG | - | chr1.1:65667753-65667772 | MS.gene21551:intron | 20.0% |
| !!! | ATGTTTTCACCATTTAAATA+AGG | + | chr1.1:65668895-65668914 | None:intergenic | 20.0% |
| !!! | CTTCACAGTTTAATTTTTTT+GGG | - | chr1.1:65667754-65667773 | MS.gene21551:intron | 20.0% |
| !!! | TATGATTTCTGTTTTTATGA+TGG | - | chr1.1:65668824-65668843 | MS.gene21551:CDS | 20.0% |
| !!! | TGATTAGTTTATTGGTTTAT+AGG | - | chr1.1:65668668-65668687 | MS.gene21551:CDS | 20.0% |
| !!! | TTCACAGTTTAATTTTTTTG+GGG | - | chr1.1:65668010-65668029 | MS.gene21551:CDS | 20.0% |
| ! | AAAAAATTACAAGGGGAAAT+CGG | + | chr1.1:65668283-65668302 | None:intergenic | 25.0% |
| ! | AAAAAATTTGACTATTCGGA+AGG | + | chr1.1:65667498-65667517 | None:intergenic | 25.0% |
| ! | AGTGTCAATTGTAAACAATT+TGG | + | chr1.1:65668850-65668869 | None:intergenic | 25.0% |
| ! | ATATATCATCATTTGTCCTA+TGG | + | chr1.1:65668623-65668642 | None:intergenic | 25.0% |
| ! | GTGGAGAAAAAAAATTACAA+GGG | + | chr1.1:65668291-65668310 | None:intergenic | 25.0% |
| ! | TAAATGGTGAAAACATTACA+GGG | - | chr1.1:65668899-65668918 | MS.gene21551:CDS | 25.0% |
| ! | TGGAGAAAAAAAATTACAAG+GGG | + | chr1.1:65668290-65668309 | None:intergenic | 25.0% |
| ! | TTAAATGGTGAAAACATTAC+AGG | - | chr1.1:65668898-65668917 | MS.gene21551:CDS | 25.0% |
| !! | AATCATCATTGGTTGAAATA+CGG | + | chr1.1:65666591-65666610 | None:intergenic | 25.0% |
| !! | ACTGAACATTTAACTTTGAT+GGG | + | chr1.1:65666261-65666280 | None:intergenic | 25.0% |
| !! | ATGCTACTTCCTTATTTAAA+TGG | - | chr1.1:65668883-65668902 | MS.gene21551:CDS | 25.0% |
| !! | GCTTGTTGGTTAATAATATT+TGG | - | chr1.1:65668338-65668357 | MS.gene21551:CDS | 25.0% |
| !! | TTTTAGTAATGCTATCAAGA+AGG | - | chr1.1:65665881-65665900 | MS.gene21551:CDS | 25.0% |
| !!! | CTGGTTGAATTCATTTTAAT+TGG | + | chr1.1:65667682-65667701 | None:intergenic | 25.0% |
| !!! | TTGCTTTTGATTATTTTCCA+TGG | + | chr1.1:65667020-65667039 | None:intergenic | 25.0% |
| !!! | TTTTCTGTTTCTGTTTTTTG+TGG | - | chr1.1:65668039-65668058 | MS.gene21551:CDS | 25.0% |
| AAAGTAAAAACAGTATGCAC+AGG | + | chr1.1:65668471-65668490 | None:intergenic | 30.0% | |
| AACACACTGAATACTTTGAA+GGG | - | chr1.1:65666002-65666021 | MS.gene21551:CDS | 30.0% | |
| AATGTTCAGTCTGATATGAT+TGG | - | chr1.1:65666271-65666290 | MS.gene21551:CDS | 30.0% | |
| AGAAAACAAGAAATCTGAGA+CGG | - | chr1.1:65669153-65669172 | MS.gene21551:intron | 30.0% | |
| AGATTCTGATTTACTTTCCT+GGG | + | chr1.1:65666329-65666348 | None:intergenic | 30.0% | |
| ATATACCATCATTTGTCCTA+TGG | + | chr1.1:65667728-65667747 | None:intergenic | 30.0% | |
| ATCTGATTGAGCTAAAGTAT+AGG | - | chr1.1:65668409-65668428 | MS.gene21551:CDS | 30.0% | |
| CAGTTAGTAATTTATCACTC+AGG | - | chr1.1:65668441-65668460 | MS.gene21551:CDS | 30.0% | |
| GGTGGAGAAAAAAAATTACA+AGG | + | chr1.1:65668292-65668311 | None:intergenic | 30.0% | |
| TACCTACTCTATTATTCTGA+CGG | - | chr1.1:65667411-65667430 | MS.gene21551:intron | 30.0% | |
| TAGATTCTGATTTACTTTCC+TGG | + | chr1.1:65666330-65666349 | None:intergenic | 30.0% | |
| TGAGTCAATAATTATCACTC+AGG | - | chr1.1:65668738-65668757 | MS.gene21551:CDS | 30.0% | |
| TGTAGACAATATTTGTGAGA+GGG | + | chr1.1:65665983-65666002 | None:intergenic | 30.0% | |
| TTGTAGACAATATTTGTGAG+AGG | + | chr1.1:65665984-65666003 | None:intergenic | 30.0% | |
| TTGTCCTATGGAAAATCTAA+AGG | + | chr1.1:65667716-65667735 | None:intergenic | 30.0% | |
| ! | ACTAACTCCTTTTGTATTTG+AGG | + | chr1.1:65666554-65666573 | None:intergenic | 30.0% |
| ! | ATTTGAAATACAAAGTCTGC+AGG | + | chr1.1:65666044-65666063 | None:intergenic | 30.0% |
| ! | ATTTTCCATAGGACAAATGA+TGG | - | chr1.1:65667720-65667739 | MS.gene21551:intron | 30.0% |
| ! | CATTCCTTTAGATTTTCCAT+AGG | - | chr1.1:65667709-65667728 | MS.gene21551:intron | 30.0% |
| ! | CTGAACATTTAACTTTGATG+GGG | + | chr1.1:65666260-65666279 | None:intergenic | 30.0% |
| ! | GACTGAACATTTAACTTTGA+TGG | + | chr1.1:65666262-65666281 | None:intergenic | 30.0% |
| ! | GTAATTTTGAACCTTTTGAG+CGG | + | chr1.1:65666722-65666741 | None:intergenic | 30.0% |
| ! | TGAACATTTAACTTTGATGG+GGG | + | chr1.1:65666259-65666278 | None:intergenic | 30.0% |
| !! | ATCAAGAAGGTTGTTGATTT+AGG | - | chr1.1:65665894-65665913 | MS.gene21551:CDS | 30.0% |
| !!! | TCTTAGGAGTGGTTTTTTAA+GGG | - | chr1.1:65668226-65668245 | MS.gene21551:CDS | 30.0% |
| !!! | TTCTTAGGAGTGGTTTTTTA+AGG | - | chr1.1:65668225-65668244 | MS.gene21551:CDS | 30.0% |
| !!! | TTTTTTAACAGTGAGACTGA+AGG | + | chr1.1:65667614-65667633 | None:intergenic | 30.0% |
| AAATCTTCTAGCCAATACTG+AGG | - | chr1.1:65667285-65667304 | MS.gene21551:intron | 35.0% | |
| AACAGTAACTGAAGCAATGT+GGG | - | chr1.1:65666132-65666151 | MS.gene21551:CDS | 35.0% | |
| AACTTTCACAAATATCTCCC+AGG | - | chr1.1:65666309-65666328 | MS.gene21551:intron | 35.0% | |
| AAGAGTTTACATCAGTGCTT+AGG | - | chr1.1:65666383-65666402 | MS.gene21551:intron | 35.0% | |
| AAGGTTCAAAATTACTGTGC+TGG | - | chr1.1:65666727-65666746 | MS.gene21551:intron | 35.0% | |
| AATTCCACATACCTCAGTAT+TGG | + | chr1.1:65667299-65667318 | None:intergenic | 35.0% | |
| ACAAAAGGAGTTAGTATAGC+AGG | - | chr1.1:65666559-65666578 | MS.gene21551:intron | 35.0% | |
| ACCATGAGTGTTTAACTCAT+AGG | - | chr1.1:65668548-65668567 | MS.gene21551:CDS | 35.0% | |
| AGAGTTTACATCAGTGCTTA+GGG | - | chr1.1:65666384-65666403 | MS.gene21551:intron | 35.0% | |
| AGGATTCATGCCAAATTTCT+TGG | - | chr1.1:65669373-65669392 | MS.gene21551:CDS | 35.0% | |
| ATAGGCACCTAAAAAAGACA+CGG | - | chr1.1:65667458-65667477 | MS.gene21551:intron | 35.0% | |
| ATGAAAGAACCTAAAGCTTG+TGG | - | chr1.1:65666421-65666440 | MS.gene21551:intron | 35.0% | |
| ATGAATCCTAAATTCGATGG+TGG | + | chr1.1:65669362-65669381 | None:intergenic | 35.0% | |
| ATGAGTTAAACACTCATGGT+TGG | + | chr1.1:65668548-65668567 | None:intergenic | 35.0% | |
| ATTACAGGGTAGAGTGAAAA+AGG | - | chr1.1:65668913-65668932 | MS.gene21551:CDS | 35.0% | |
| ATTCCCTTTAATGAGGCTTT+GGG | - | chr1.1:65666751-65666770 | MS.gene21551:intron | 35.0% | |
| CAAAATAAGTACTCCATCTG+TGG | - | chr1.1:65669126-65669145 | MS.gene21551:intron | 35.0% | |
| CAACACACTGAATACTTTGA+AGG | - | chr1.1:65666001-65666020 | MS.gene21551:CDS | 35.0% | |
| CATTGCTTCAGTTACTGTTA+AGG | + | chr1.1:65666131-65666150 | None:intergenic | 35.0% | |
| CCAAATCAGAAAATGAAACG+TGG | - | chr1.1:65666526-65666545 | MS.gene21551:intron | 35.0% | |
| GCAGTTACTGCATTATAGTT+TGG | - | chr1.1:65666069-65666088 | MS.gene21551:CDS | 35.0% | |
| GGACTTACTGATGAGTAATT+TGG | - | chr1.1:65665851-65665870 | MS.gene21551:CDS | 35.0% | |
| GGATTCATGCCAAATTTCTT+GGG | - | chr1.1:65669374-65669393 | MS.gene21551:CDS | 35.0% | |
| GTCAGAATAATAGAGTAGGT+AGG | + | chr1.1:65667412-65667431 | None:intergenic | 35.0% | |
| TAACAGTAACTGAAGCAATG+TGG | - | chr1.1:65666131-65666150 | MS.gene21551:CDS | 35.0% | |
| TACCTGCATAACCTTCTTAT+TGG | + | chr1.1:65666875-65666894 | None:intergenic | 35.0% | |
| TATAGTTTGGTAGAGATGCT+CGG | - | chr1.1:65666082-65666101 | MS.gene21551:CDS | 35.0% | |
| TATTCCCTTTAATGAGGCTT+TGG | - | chr1.1:65666750-65666769 | MS.gene21551:intron | 35.0% | |
| TCTAAAGGAATGCAAAACAC+TGG | + | chr1.1:65667701-65667720 | None:intergenic | 35.0% | |
| TGAGCTAAAGTATAGGAACA+AGG | - | chr1.1:65668416-65668435 | MS.gene21551:CDS | 35.0% | |
| TGAGCTAAAGTATAGGAACA+GGG | - | chr1.1:65668416-65668435 | MS.gene21551:CDS | 35.0% | |
| TTGAGCTAAAGTATAGGAAC+AGG | - | chr1.1:65668415-65668434 | MS.gene21551:CDS | 35.0% | |
| TTGCATCAGGAGATAGAAAA+GGG | - | chr1.1:65667259-65667278 | MS.gene21551:intron | 35.0% | |
| ! | AAAGTTAGCTAACTTGCATC+AGG | - | chr1.1:65667246-65667265 | MS.gene21551:intron | 35.0% |
| ! | ACACACTGAATACTTTGAAG+GGG | - | chr1.1:65666003-65666022 | MS.gene21551:CDS | 35.0% |
| ! | CCACGTTTCATTTTCTGATT+TGG | + | chr1.1:65666529-65666548 | None:intergenic | 35.0% |
| ! | GCACTGATGTAAACTCTTTA+TGG | + | chr1.1:65666381-65666400 | None:intergenic | 35.0% |
| ! | TTGTTTTCTTTCACCACAGA+TGG | + | chr1.1:65669142-65669161 | None:intergenic | 35.0% |
| !! | AAGAAGGTTGTTGATTTAGG+AGG | - | chr1.1:65665897-65665916 | MS.gene21551:CDS | 35.0% |
| !! | CACAGATGGAGTACTTATTT+TGG | + | chr1.1:65669128-65669147 | None:intergenic | 35.0% |
| !! | TTCTGATTTGGAACTTCAGA+TGG | + | chr1.1:65666517-65666536 | None:intergenic | 35.0% |
| !!! | CTTAGGAGTGGTTTTTTAAG+GGG | - | chr1.1:65668227-65668246 | MS.gene21551:CDS | 35.0% |
| !!! | GAATGGCTTAGGTTTTGATT+TGG | + | chr1.1:65666692-65666711 | None:intergenic | 35.0% |
| !!! | GTTTAATTTTTTTGGGGTGC+TGG | - | chr1.1:65668016-65668035 | MS.gene21551:CDS | 35.0% |
| ACAGAAGCAATCAGCAACTA+AGG | + | chr1.1:65668142-65668161 | None:intergenic | 40.0% | |
| AGTAGATGTTGCATCCTTTG+TGG | + | chr1.1:65666650-65666669 | None:intergenic | 40.0% | |
| CACTTCTTCCATACTCATTC+TGG | - | chr1.1:65667051-65667070 | MS.gene21551:intron | 40.0% | |
| CAGAATGAGTATGGAAGAAG+TGG | + | chr1.1:65667053-65667072 | None:intergenic | 40.0% | |
| CAGTCAAGAAATGGCTGAAA+TGG | - | chr1.1:65665923-65665942 | MS.gene21551:CDS | 40.0% | |
| CTTGCATCAGGAGATAGAAA+AGG | - | chr1.1:65667258-65667277 | MS.gene21551:intron | 40.0% | |
| GACAGAAAAAATCCTCACAC+AGG | - | chr1.1:65668946-65668965 | MS.gene21551:CDS | 40.0% | |
| GACCGTCAGAATAATAGAGT+AGG | + | chr1.1:65667416-65667435 | None:intergenic | 40.0% | |
| GCCTATGAGTTAAACACTCA+TGG | + | chr1.1:65668552-65668571 | None:intergenic | 40.0% | |
| GCTGTGCTAAGACTAAAATC+TGG | - | chr1.1:65669100-65669119 | MS.gene21551:CDS | 40.0% | |
| GCTTCAGTTACTGTTAAGGA+GGG | + | chr1.1:65666127-65666146 | None:intergenic | 40.0% | |
| GGCATGAATCCTAAATTCGA+TGG | + | chr1.1:65669365-65669384 | None:intergenic | 40.0% | |
| GGGTAAAGCTGAATCATCAT+TGG | + | chr1.1:65666602-65666621 | None:intergenic | 40.0% | |
| GTACAAGGACTTCCTTGAAA+CGG | + | chr1.1:65665949-65665968 | None:intergenic | 40.0% | |
| GTAGATGTTGCATCCTTTGT+GGG | + | chr1.1:65666649-65666668 | None:intergenic | 40.0% | |
| GTAGGTAGGTACTCAAGATA+CGG | + | chr1.1:65667398-65667417 | None:intergenic | 40.0% | |
| TAGAAGAGAATGCTGAGAAG+AGG | - | chr1.1:65666975-65666994 | MS.gene21551:intron | 40.0% | |
| TAGCCATGTACTGCAAACAT+AGG | - | chr1.1:65667550-65667569 | MS.gene21551:intron | 40.0% | |
| TAGGTAGGTACTCAAGATAC+GGG | + | chr1.1:65667397-65667416 | None:intergenic | 40.0% | |
| TAGTCAACTGCAGGAATATG+TGG | - | chr1.1:65669048-65669067 | MS.gene21551:CDS | 40.0% | |
| TCACCTATGTTTGCAGTACA+CGG | + | chr1.1:65667556-65667575 | None:intergenic | 40.0% | |
| TCACCTATGTTTGCAGTACA+TGG | + | chr1.1:65667556-65667575 | None:intergenic | 40.0% | |
| TCATGGAGCTCATTGCAATT+CGG | + | chr1.1:65669304-65669323 | None:intergenic | 40.0% | |
| TGCATCAGGAGATAGAAAAG+GGG | - | chr1.1:65667260-65667279 | MS.gene21551:intron | 40.0% | |
| TGCTGGTATTCCCTTTAATG+AGG | - | chr1.1:65666744-65666763 | MS.gene21551:intron | 40.0% | |
| TGCTTCAGTTACTGTTAAGG+AGG | + | chr1.1:65666128-65666147 | None:intergenic | 40.0% | |
| TTCTTCCATACTCATTCTGG+AGG | - | chr1.1:65667054-65667073 | MS.gene21551:intron | 40.0% | |
| TTGCCCAAAGCCTCATTAAA+GGG | + | chr1.1:65666757-65666776 | None:intergenic | 40.0% | |
| ! | CTGAATACTTTGAAGGGGAA+AGG | - | chr1.1:65666008-65666027 | MS.gene21551:CDS | 40.0% |
| ! | GTTTTGTGTGTAGTGACTGT+TGG | - | chr1.1:65668163-65668182 | MS.gene21551:CDS | 40.0% |
| ! | TGATTTGGAACTTCAGATGG+TGG | + | chr1.1:65666514-65666533 | None:intergenic | 40.0% |
| ! | TTAGTTGCTGATTGCTTCTG+TGG | - | chr1.1:65668141-65668160 | MS.gene21551:CDS | 40.0% |
| !! | GATTTGGCTGTTTTCACTGT+TGG | + | chr1.1:65666676-65666695 | None:intergenic | 40.0% |
| !! | GCTAGTTCTTTTCTTAGGAG+TGG | - | chr1.1:65668215-65668234 | MS.gene21551:CDS | 40.0% |
| !! | GGGTTGCTAGTTCTTTTCTT+AGG | - | chr1.1:65668210-65668229 | MS.gene21551:CDS | 40.0% |
| !!! | TCAGCAGTTTTGCTGTTTTC+TGG | - | chr1.1:65668104-65668123 | MS.gene21551:CDS | 40.0% |
| !!! | TGGAGAGAGCAGTTTTGTTT+CGG | - | chr1.1:65668059-65668078 | MS.gene21551:CDS | 40.0% |
| !!! | TTAAGGAGGGTTTTAGTTCC+CGG | + | chr1.1:65666114-65666133 | None:intergenic | 40.0% |
| AATGAGCTCCATGAGAAGCA+AGG | - | chr1.1:65669310-65669329 | MS.gene21551:CDS | 45.0% | |
| ACACGAGTCATTTCACCAGA+AGG | - | chr1.1:65666181-65666200 | MS.gene21551:CDS | 45.0% | |
| ACCTAAAGCTTGTGGCAAAG+CGG | - | chr1.1:65666429-65666448 | MS.gene21551:intron | 45.0% | |
| ACTAGCTGCCTTCTTTCTGA+CGG | + | chr1.1:65669032-65669051 | None:intergenic | 45.0% | |
| AGATAAGCTTCGCAAGCTTC+AGG | - | chr1.1:65666897-65666916 | MS.gene21551:intron | 45.0% | |
| AGCACAAGAATTGCAGGATG+AGG | - | chr1.1:65666828-65666847 | MS.gene21551:intron | 45.0% | |
| AGGAAGTCCTTGTACACAGA+AGG | - | chr1.1:65665954-65665973 | MS.gene21551:CDS | 45.0% | |
| AGGAGGCTACAGTCAAGAAA+TGG | - | chr1.1:65665914-65665933 | MS.gene21551:CDS | 45.0% | |
| ATCTCGAGCACAAGAATTGC+AGG | - | chr1.1:65666822-65666841 | MS.gene21551:intron | 45.0% | |
| ATGAGCTCCATGAGAAGCAA+GGG | - | chr1.1:65669311-65669330 | MS.gene21551:CDS | 45.0% | |
| ATTCTCCTCTTCCGCTCAAA+AGG | - | chr1.1:65666708-65666727 | MS.gene21551:intron | 45.0% | |
| CAAGGCGCACTAATAAGCTT+GGG | + | chr1.1:65668313-65668332 | None:intergenic | 45.0% | |
| CACCAACTCTTTCTCTAGCA+AGG | + | chr1.1:65667089-65667108 | None:intergenic | 45.0% | |
| CAGCATGGTAAAGCTAGAGA+AGG | - | chr1.1:65669072-65669091 | MS.gene21551:CDS | 45.0% | |
| CGCTGCAAAATTACCCACAA+AGG | - | chr1.1:65666633-65666652 | MS.gene21551:intron | 45.0% | |
| CGTGGCTCCTCAAATACAAA+AGG | - | chr1.1:65666544-65666563 | MS.gene21551:intron | 45.0% | |
| CTACTGCTGCCCAAGAAATT+TGG | + | chr1.1:65669386-65669405 | None:intergenic | 45.0% | |
| CTAGCCAATACTGAGGTATG+TGG | - | chr1.1:65667292-65667311 | MS.gene21551:intron | 45.0% | |
| CTTGCCCAAAGCCTCATTAA+AGG | + | chr1.1:65666758-65666777 | None:intergenic | 45.0% | |
| CTTTGCCTCCAGAATGAGTA+TGG | + | chr1.1:65667062-65667081 | None:intergenic | 45.0% | |
| CTTTGGGCAAGTTTATCCCA+CGG | - | chr1.1:65666767-65666786 | MS.gene21551:intron | 45.0% | |
| GAAAAGAACTAGCAACCCAC+TGG | + | chr1.1:65668208-65668227 | None:intergenic | 45.0% | |
| GAATGACTGGGCCAATAAGA+AGG | - | chr1.1:65666861-65666880 | MS.gene21551:intron | 45.0% | |
| GATGATTCAGCTTTACCCGA+AGG | - | chr1.1:65666604-65666623 | MS.gene21551:intron | 45.0% | |
| GCAAAACTGCTGACCGAAAA+AGG | + | chr1.1:65668097-65668116 | None:intergenic | 45.0% | |
| GCAAACATAGGTGAGATGAG+CGG | - | chr1.1:65667562-65667581 | MS.gene21551:intron | 45.0% | |
| GGAAAGCTTACAAGCGTAAG+TGG | - | chr1.1:65666463-65666482 | MS.gene21551:intron | 45.0% | |
| GGCAAAGCGGGTGTTAAATT+AGG | - | chr1.1:65666442-65666461 | MS.gene21551:intron | 45.0% | |
| GGCAAGTTATCAACAAGCAC+TGG | - | chr1.1:65667138-65667157 | MS.gene21551:intron | 45.0% | |
| GGCCAATAAGAAGGTTATGC+AGG | - | chr1.1:65666870-65666889 | MS.gene21551:intron | 45.0% | |
| GTAGGACCACCATCGAATTT+AGG | - | chr1.1:65669353-65669372 | MS.gene21551:CDS | 45.0% | |
| GTCCTTGCTAGAGAAAGAGT+TGG | - | chr1.1:65667084-65667103 | MS.gene21551:intron | 45.0% | |
| TAAAGTATGCAGCCTGTGTG+AGG | + | chr1.1:65668961-65668980 | None:intergenic | 45.0% | |
| TAGCCGTGTACTGCAAACAT+AGG | - | chr1.1:65667805-65667824 | MS.gene21551:intron | 45.0% | |
| TGAAGGAATGCCCTTCATGT+AGG | - | chr1.1:65669335-65669354 | MS.gene21551:CDS | 45.0% | |
| TTTGGGCAAGTTTATCCCAC+GGG | - | chr1.1:65666768-65666787 | MS.gene21551:intron | 45.0% | |
| ! | AGTGACTGTTGGAGCTTTGT+TGG | - | chr1.1:65668174-65668193 | MS.gene21551:CDS | 45.0% |
| ! | GTCGTTGGCTGAAAAGTCAA+TGG | - | chr1.1:65667117-65667136 | MS.gene21551:intron | 45.0% |
| ! | TAAGGGGTTTTTGTTCGAGC+CGG | - | chr1.1:65668243-65668262 | MS.gene21551:intron | 45.0% |
| ! | TGAAGCACTCATGAAAGCTG+AGG | - | chr1.1:65669000-65669019 | MS.gene21551:CDS | 45.0% |
| ! | TGAGAAGAGGATCTCTGAAG+TGG | - | chr1.1:65666988-65667007 | MS.gene21551:intron | 45.0% |
| ! | TTGAACCTTTTGAGCGGAAG+AGG | + | chr1.1:65666716-65666735 | None:intergenic | 45.0% |
| ! | TTTTGAGCGGAAGAGGAGAA+TGG | + | chr1.1:65666709-65666728 | None:intergenic | 45.0% |
| !! | ACTGTTGGAGCTTTGTTGGT+TGG | - | chr1.1:65668178-65668197 | MS.gene21551:CDS | 45.0% |
| !! | TTGTTGGTTGGTAGTCCAGT+GGG | - | chr1.1:65668190-65668209 | MS.gene21551:CDS | 45.0% |
| !! | TTTGTTGGTTGGTAGTCCAG+TGG | - | chr1.1:65668189-65668208 | MS.gene21551:CDS | 45.0% |
| !! | TTTTGTTTCGGTGTGGTGCT+GGG | - | chr1.1:65668071-65668090 | MS.gene21551:CDS | 45.0% |
| !!! | AGAGCAGTTTTGTTTCGGTG+TGG | - | chr1.1:65668064-65668083 | MS.gene21551:CDS | 45.0% |
| !!! | GAAGTCGCCGTGTCTTTTTT+AGG | + | chr1.1:65667468-65667487 | None:intergenic | 45.0% |
| ACAAGCCCAGTCGTGGAAAA+CGG | - | chr1.1:65667183-65667202 | MS.gene21551:intron | 50.0% | |
| AGCACTCATGAAAGCTGAGG+AGG | - | chr1.1:65669003-65669022 | MS.gene21551:CDS | 50.0% | |
| AGCTGGTGGAAGATTGAAGC+GGG | - | chr1.1:65669204-65669223 | MS.gene21551:CDS | 50.0% | |
| AGGGTCTCCTTCTGTGTACA+AGG | + | chr1.1:65665964-65665983 | None:intergenic | 50.0% | |
| AGGTGCAAAGCTGGAATGAC+TGG | - | chr1.1:65666848-65666867 | MS.gene21551:intron | 50.0% | |
| CACAAAACCTGATGCGCACA+TGG | + | chr1.1:65669280-65669299 | None:intergenic | 50.0% | |
| CAGCTGGTGGAAGATTGAAG+CGG | - | chr1.1:65669203-65669222 | MS.gene21551:CDS | 50.0% | |
| CCATGAGAAGCAAGGGATGA+AGG | - | chr1.1:65669318-65669337 | MS.gene21551:CDS | 50.0% | |
| CCTAAAGCTTGTGGCAAAGC+GGG | - | chr1.1:65666430-65666449 | MS.gene21551:intron | 50.0% | |
| CCTTCATCCCTTGCTTCTCA+TGG | + | chr1.1:65669321-65669340 | None:intergenic | 50.0% | |
| CTATTCAACAAGCCCAGTCG+TGG | - | chr1.1:65667176-65667195 | MS.gene21551:intron | 50.0% | |
| CTTATTAGTGCGCCTTGCAC+GGG | - | chr1.1:65668316-65668335 | MS.gene21551:CDS | 50.0% | |
| GATTCAGCTTTACCCGAAGG+AGG | - | chr1.1:65666607-65666626 | MS.gene21551:intron | 50.0% | |
| GCAAGGCGCACTAATAAGCT+TGG | + | chr1.1:65668314-65668333 | None:intergenic | 50.0% | |
| GCAGGAATATGTGGACAGCA+TGG | - | chr1.1:65669057-65669076 | MS.gene21551:CDS | 50.0% | |
| GCTTATTAGTGCGCCTTGCA+CGG | - | chr1.1:65668315-65668334 | MS.gene21551:CDS | 50.0% | |
| GGTGCAAAGCTGGAATGACT+GGG | - | chr1.1:65666849-65666868 | MS.gene21551:intron | 50.0% | |
| GTGTGTCATGTGCCTATCAG+AGG | - | chr1.1:65669234-65669253 | MS.gene21551:CDS | 50.0% | |
| GTTTATCCCACGGGATGAGA+AGG | - | chr1.1:65666777-65666796 | MS.gene21551:intron | 50.0% | |
| TAAGCTTCGCAAGCTTCAGG+CGG | - | chr1.1:65666900-65666919 | MS.gene21551:intron | 50.0% | |
| TAGGTGCCTATGCATGTCCA+GGG | + | chr1.1:65667449-65667468 | None:intergenic | 50.0% | |
| TCACCAGAAGGTCAACTGAG+TGG | - | chr1.1:65666193-65666212 | MS.gene21551:CDS | 50.0% | |
| TCATGTGCCTATCAGAGGAG+AGG | - | chr1.1:65669239-65669258 | MS.gene21551:CDS | 50.0% | |
| TCCTATGGCAACTCAGCTTG+AGG | - | chr1.1:65665830-65665849 | MS.gene21551:CDS | 50.0% | |
| TCCTCAAGCTGAGTTGCCAT+AGG | + | chr1.1:65665834-65665853 | None:intergenic | 50.0% | |
| TGAAGCAATGTGGGAGTTGC+TGG | - | chr1.1:65666141-65666160 | MS.gene21551:CDS | 50.0% | |
| TGGCTGAAATGGCCGTTTCA+AGG | - | chr1.1:65665934-65665953 | MS.gene21551:CDS | 50.0% | |
| TTAACCAACAAGCCCGTGCA+AGG | + | chr1.1:65668331-65668350 | None:intergenic | 50.0% | |
| TTAGGTGCCTATGCATGTCC+AGG | + | chr1.1:65667450-65667469 | None:intergenic | 50.0% | |
| ! | AAATCTGAGACGGTGACGAC+GGG | - | chr1.1:65669163-65669182 | MS.gene21551:intron | 50.0% |
| ! | CAACTCCGTTTTCCACGACT+GGG | + | chr1.1:65667191-65667210 | None:intergenic | 50.0% |
| ! | CGATGGTGGTCCTACATGAA+GGG | + | chr1.1:65669348-65669367 | None:intergenic | 50.0% |
| ! | GAAATCTGAGACGGTGACGA+CGG | - | chr1.1:65669162-65669181 | MS.gene21551:intron | 50.0% |
| ! | GTTGGTGTCTGCTAAGTCGT+TGG | - | chr1.1:65667102-65667121 | MS.gene21551:intron | 50.0% |
| ! | TCGATGGTGGTCCTACATGA+AGG | + | chr1.1:65669349-65669368 | None:intergenic | 50.0% |
| ! | TTTTCTGCCATGTGCGCATC+AGG | - | chr1.1:65669270-65669289 | MS.gene21551:CDS | 50.0% |
| ! | TTTTGCAGCGCTACCTCCTT+CGG | + | chr1.1:65666623-65666642 | None:intergenic | 50.0% |
| !! | CTCTGAAGTGGAGAATGCCA+TGG | - | chr1.1:65667000-65667019 | MS.gene21551:intron | 50.0% |
| !! | TAGAGATGCTCGGTGTACTC+CGG | - | chr1.1:65666092-65666111 | MS.gene21551:CDS | 50.0% |
| !! | TCCACCAGCTGGTTTGTCTT+GGG | + | chr1.1:65669194-65669213 | None:intergenic | 50.0% |
| !! | TTCCACCAGCTGGTTTGTCT+TGG | + | chr1.1:65669195-65669214 | None:intergenic | 50.0% |
| !!! | GTTTTGTTTCGGTGTGGTGC+TGG | - | chr1.1:65668070-65668089 | MS.gene21551:CDS | 50.0% |
| !!! | TGCTGTTTTCTGGTCTGCTG+CGG | - | chr1.1:65668114-65668133 | MS.gene21551:CDS | 50.0% |
| AGGTGCCTATGCATGTCCAG+GGG | + | chr1.1:65667448-65667467 | None:intergenic | 55.0% | |
| CAACCGACCTCTCCTCTGAT+AGG | + | chr1.1:65669249-65669268 | None:intergenic | 55.0% | |
| CCACCACTCAGTTGACCTTC+TGG | + | chr1.1:65666199-65666218 | None:intergenic | 55.0% | |
| CCAGAAGGTCAACTGAGTGG+TGG | - | chr1.1:65666196-65666215 | MS.gene21551:CDS | 55.0% | |
| CCAGTCGTGGAAAACGGAGT+TGG | - | chr1.1:65667189-65667208 | MS.gene21551:intron | 55.0% | |
| CCCGCTTTGCCACAAGCTTT+AGG | + | chr1.1:65666433-65666452 | None:intergenic | 55.0% | |
| CGCTTCAATCTTCCACCAGC+TGG | + | chr1.1:65669205-65669224 | None:intergenic | 55.0% | |
| GAAGGCAGCTAGTCAACTGC+AGG | - | chr1.1:65669039-65669058 | MS.gene21551:CDS | 55.0% | |
| GCGGAAGAGGAGAATGGCTT+AGG | + | chr1.1:65666703-65666722 | None:intergenic | 55.0% | |
| GGAGGATGCCGTCAGAAAGA+AGG | - | chr1.1:65669021-65669040 | MS.gene21551:CDS | 55.0% | |
| GGCGCACTAATAAGCTTGGG+TGG | + | chr1.1:65668310-65668329 | None:intergenic | 55.0% | |
| GTGCCTATCAGAGGAGAGGT+CGG | - | chr1.1:65669243-65669262 | MS.gene21551:CDS | 55.0% | |
| GTTCGTCCTTCTCATCCCGT+GGG | + | chr1.1:65666786-65666805 | None:intergenic | 55.0% | |
| TCCCAAGACAAACCAGCTGG+TGG | - | chr1.1:65669190-65669209 | MS.gene21551:CDS | 55.0% | |
| TGCAGGATGAGGTGCAAAGC+TGG | - | chr1.1:65666839-65666858 | MS.gene21551:intron | 55.0% | |
| TGTTCGTCCTTCTCATCCCG+TGG | + | chr1.1:65666787-65666806 | None:intergenic | 55.0% | |
| TTTGCAGCGCTACCTCCTTC+GGG | + | chr1.1:65666622-65666641 | None:intergenic | 55.0% | |
| ! | AATCTGAGACGGTGACGACG+GGG | - | chr1.1:65669164-65669183 | MS.gene21551:intron | 55.0% |
| ! | CCAACTCCGTTTTCCACGAC+TGG | + | chr1.1:65667192-65667211 | None:intergenic | 55.0% |
| !! | AGAGATGCTCGGTGTACTCC+GGG | - | chr1.1:65666093-65666112 | MS.gene21551:CDS | 55.0% |
| !! | GTGTGGTGCTGGGCCTTTTT+CGG | - | chr1.1:65668081-65668100 | MS.gene21551:CDS | 55.0% |
| GGCTCCCAAGACAAACCAGC+TGG | - | chr1.1:65669187-65669206 | MS.gene21551:CDS | 60.0% | |
| TCGTGCCCCTGGACATGCAT+AGG | - | chr1.1:65667440-65667459 | MS.gene21551:intron | 60.0% | |
| ! | ATCGGTTGCCGCAAAAGCGC+CGG | + | chr1.1:65668265-65668284 | None:intergenic | 60.0% |
| ! | ATCTGAGACGGTGACGACGG+GGG | - | chr1.1:65669165-65669184 | MS.gene21551:intron | 60.0% |
| ! | TGTTCGAGCCGGCGCTTTTG+CGG | - | chr1.1:65668254-65668273 | MS.gene21551:intron | 60.0% |
| TGCGCCTTGCACGGGCTTGT+TGG | - | chr1.1:65668324-65668343 | MS.gene21551:CDS | 65.0% | |
| ! | TCTGAGACGGTGACGACGGG+GGG | - | chr1.1:65669166-65669185 | MS.gene21551:intron | 65.0% |
| ! | GACGGTCTGACTCGTGCCCC+TGG | - | chr1.1:65667429-65667448 | MS.gene21551:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 65665820 | 65669405 | 65665820 | ID=MS.gene21551 |
| chr1.1 | mRNA | 65665820 | 65669405 | 65665820 | ID=MS.gene21551.t1;Parent=MS.gene21551 |
| chr1.1 | exon | 65669173 | 65669405 | 65669173 | ID=MS.gene21551.t1.exon1;Parent=MS.gene21551.t1 |
| chr1.1 | CDS | 65669173 | 65669405 | 65669173 | ID=cds.MS.gene21551.t1;Parent=MS.gene21551.t1 |
| chr1.1 | exon | 65668302 | 65669128 | 65668302 | ID=MS.gene21551.t1.exon2;Parent=MS.gene21551.t1 |
| chr1.1 | CDS | 65668302 | 65669128 | 65668302 | ID=cds.MS.gene21551.t1;Parent=MS.gene21551.t1 |
| chr1.1 | exon | 65667919 | 65668258 | 65667919 | ID=MS.gene21551.t1.exon3;Parent=MS.gene21551.t1 |
| chr1.1 | CDS | 65667919 | 65668258 | 65667919 | ID=cds.MS.gene21551.t1;Parent=MS.gene21551.t1 |
| chr1.1 | exon | 65665820 | 65666305 | 65665820 | ID=MS.gene21551.t1.exon4;Parent=MS.gene21551.t1 |
| chr1.1 | CDS | 65665820 | 65666305 | 65665820 | ID=cds.MS.gene21551.t1;Parent=MS.gene21551.t1 |
| Gene Sequence |
| Protein sequence |
