Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22404.t1 | KEH24031.1 | 98.2 | 501 | 9 | 0 | 1 | 501 | 1 | 501 | 3.30E-282 | 980.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22404.t1 | O82413 | 77.7 | 444 | 96 | 2 | 60 | 501 | 44 | 486 | 5.4e-201 | 701.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22404.t1 | A0A072U3T0 | 98.2 | 501 | 9 | 0 | 1 | 501 | 1 | 501 | 2.4e-282 | 980.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene22404 | 0.810571 | 1.08E-50 | -1.69E-46 |
| MS.gene050099 | MS.gene22404 | 0.803335 | 3.66E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene22404 | 0.821032 | 5.01E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene22404 | 0.823331 | 1.47E-53 | -1.69E-46 |
| MS.gene050770 | MS.gene22404 | 0.825406 | 4.77E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene22404 | 0.810662 | 1.03E-50 | -1.69E-46 |
| MS.gene051877 | MS.gene22404 | 0.819784 | 9.69E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene22404 | 0.840689 | 7.48E-58 | -1.69E-46 |
| MS.gene053322 | MS.gene22404 | 0.802915 | 4.47E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene22404 | 0.803866 | 2.84E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene22404 | 0.827501 | 1.51E-54 | -1.69E-46 |
| MS.gene05455 | MS.gene22404 | 0.845374 | 4.23E-59 | -1.69E-46 |
| MS.gene054802 | MS.gene22404 | 0.839448 | 1.58E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene22404 | 0.841794 | 3.83E-58 | -1.69E-46 |
| MS.gene054804 | MS.gene22404 | 0.839862 | 1.23E-57 | -1.69E-46 |
| MS.gene055390 | MS.gene22404 | 0.832687 | 8.20E-56 | -1.69E-46 |
| MS.gene055636 | MS.gene22404 | 0.800722 | 1.26E-48 | -1.69E-46 |
| MS.gene055647 | MS.gene22404 | 0.801467 | 8.88E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene22404 | 0.828793 | 7.38E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene22404 | 0.828557 | 8.41E-55 | -1.69E-46 |
| MS.gene056452 | MS.gene22404 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene057295 | MS.gene22404 | 0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene22404 | 0.825436 | 4.69E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene22404 | 0.850047 | 2.19E-60 | -1.69E-46 |
| MS.gene058660 | MS.gene22404 | 0.845616 | 3.63E-59 | -1.69E-46 |
| MS.gene05907 | MS.gene22404 | 0.820237 | 7.63E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene22404 | 0.804646 | 1.96E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene22404 | 0.839375 | 1.65E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene22404 | 0.814034 | 1.89E-51 | -1.69E-46 |
| MS.gene060193 | MS.gene22404 | 0.809035 | 2.31E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene22404 | 0.804795 | 1.82E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene22404 | 0.851144 | 1.07E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22404.t1 | MTR_7g101940 | 98.204 | 501 | 9 | 0 | 1 | 501 | 1 | 501 | 0.0 | 1006 |
| MS.gene22404.t1 | MTR_1g057860 | 29.002 | 431 | 275 | 12 | 87 | 497 | 434 | 853 | 4.46e-42 | 160 |
| MS.gene22404.t1 | MTR_1g022010 | 28.977 | 176 | 104 | 6 | 240 | 406 | 49 | 212 | 5.96e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22404.t1 | AT3G46100 | 73.939 | 495 | 116 | 4 | 9 | 501 | 3 | 486 | 0.0 | 739 |
| MS.gene22404.t1 | AT5G03406 | 73.359 | 259 | 59 | 3 | 20 | 278 | 15 | 263 | 4.09e-132 | 384 |
| MS.gene22404.t1 | AT3G02760 | 29.647 | 425 | 270 | 11 | 87 | 492 | 449 | 863 | 1.91e-39 | 153 |
| MS.gene22404.t1 | AT3G02760 | 29.647 | 425 | 270 | 11 | 87 | 492 | 449 | 863 | 1.91e-39 | 153 |
Find 140 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATCAGATGTTGGATTTA+AGG | 0.120058 | 7.3:-11471770 | MS.gene22404:CDS |
| GACATTCCTGCTTGTGGTTT+TGG | 0.175515 | 7.3:-11468773 | MS.gene22404:CDS |
| GATCATTTGTTCTCAACTTT+TGG | 0.257033 | 7.3:-11468803 | MS.gene22404:CDS |
| TGGAAAGCAAACCACTTAAA+TGG | 0.268229 | 7.3:-11467506 | MS.gene22404:intron |
| GAAAGCAGGAGAGGAGATTA+AGG | 0.268692 | 7.3:-11475084 | MS.gene22404:CDS |
| GCCTGAACTTACTCCTTCTT+TGG | 0.276143 | 7.3:-11472634 | MS.gene22404:CDS |
| ATGAAGAACGAACACGAAAA+TGG | 0.276211 | 7.3:+11475693 | None:intergenic |
| CATTGGTGTTCCTGGGGTTA+TGG | 0.288703 | 7.3:-11472321 | MS.gene22404:intron |
| ATGGATATCATTGGTGTTCC+TGG | 0.292319 | 7.3:-11472329 | MS.gene22404:CDS |
| GCTAACATTCTCAGAGAAAA+AGG | 0.300441 | 7.3:-11467549 | MS.gene22404:CDS |
| ACAGAGTGTTGACTTAGTTT+TGG | 0.312626 | 7.3:-11467526 | MS.gene22404:CDS |
| TTGCGCAATCGCATTTCTTC+GGG | 0.327261 | 7.3:+11475423 | None:intergenic |
| TTCTCACTGGCTGAAAAGTT+TGG | 0.332656 | 7.3:-11469789 | MS.gene22404:CDS |
| AAGAAATGCGATTGCGCAAT+TGG | 0.335227 | 7.3:-11475419 | MS.gene22404:CDS |
| TCAATACCTGAAAATATGTT+TGG | 0.341014 | 7.3:-11471032 | MS.gene22404:CDS |
| TCTTTCTTTATCTCATCAAC+TGG | 0.341364 | 7.3:+11470591 | None:intergenic |
| ATTGCGCAATCGCATTTCTT+CGG | 0.343207 | 7.3:+11475422 | None:intergenic |
| TCTACCAGCGGCGGCCGGTC+TGG | 0.350165 | 7.3:-11475528 | MS.gene22404:CDS |
| TTACACTGGCATTGTCTTTG+AGG | 0.365282 | 7.3:-11469715 | MS.gene22404:intron |
| TGCATCAAGTTGAAGCCATT+TGG | 0.368293 | 7.3:+11469761 | None:intergenic |
| TACTCCTTCTTTGGCAAGGC+TGG | 0.376352 | 7.3:-11472625 | MS.gene22404:CDS |
| TGAGCACTACCAGTGGAATA+TGG | 0.383829 | 7.3:-11472348 | MS.gene22404:CDS |
| GTTACTTTCTTCAAACGAAT+AGG | 0.386013 | 7.3:-11471799 | MS.gene22404:CDS |
| AAAAGTTTGGTTACTCCAAA+TGG | 0.391232 | 7.3:-11469776 | MS.gene22404:CDS |
| AGTCCGAGGCATTGTTCGTT+AGG | 0.406959 | 7.3:-11475106 | MS.gene22404:CDS |
| TTCTGAACTTCGCCGGTGAC+CGG | 0.418243 | 7.3:+11475486 | None:intergenic |
| AGTTCTTTCTGTAAAGTCAT+TGG | 0.420094 | 7.3:-11470520 | MS.gene22404:CDS |
| AAGTCATTGGCCGAGTTAGA+AGG | 0.420903 | 7.3:-11470507 | MS.gene22404:intron |
| TAGAATCGGTCTCGGCCGCT+TGG | 0.423947 | 7.3:+11475547 | None:intergenic |
| CAGACGCTCAGCATTTGTTC+TGG | 0.424717 | 7.3:+11467013 | None:intergenic |
| CAGAACAAATGCTGAGCGTC+TGG | 0.438474 | 7.3:-11467012 | MS.gene22404:CDS |
| TAGCTCGGAGCTTTCCTTCA+CGG | 0.452781 | 7.3:+11468846 | None:intergenic |
| AGAATCGGTCTCGGCCGCTT+GGG | 0.454590 | 7.3:+11475548 | None:intergenic |
| GTCAAGGTTGTACGGATTTG+AGG | 0.457736 | 7.3:-11475150 | MS.gene22404:CDS |
| GCTGAGCGTCTGGTATTAGT+AGG | 0.457765 | 7.3:-11467002 | MS.gene22404:CDS |
| AGGAAATTCTGAGTGGCAAA+GGG | 0.459110 | 7.3:-11466982 | MS.gene22404:CDS |
| GAACACGAAAATGGAGTTGC+AGG | 0.459319 | 7.3:+11475702 | None:intergenic |
| TGGATATCATTGGTGTTCCT+GGG | 0.460586 | 7.3:-11472328 | MS.gene22404:CDS |
| CCGGCCGCCGCTGGTAGAAT+CGG | 0.466117 | 7.3:+11475533 | None:intergenic |
| AACTTACTCCTTCTTTGGCA+AGG | 0.466158 | 7.3:-11472629 | MS.gene22404:CDS |
| CTTGATGCATCAGTTGTTCG+TGG | 0.466479 | 7.3:-11469747 | MS.gene22404:CDS |
| AGGATTTCATACCATTTAAG+TGG | 0.467027 | 7.3:+11467495 | None:intergenic |
| AAGAAAGAGTTGAAAGCTCT+TGG | 0.471584 | 7.3:-11470576 | MS.gene22404:CDS |
| TAGAGAGGCTCGGAGGGAGT+GGG | 0.473809 | 7.3:-11469839 | MS.gene22404:CDS |
| TTAGAGAGGCTCGGAGGGAG+TGG | 0.476279 | 7.3:-11469840 | MS.gene22404:intron |
| GCATTGTTCGTTAGGAAAGC+AGG | 0.476537 | 7.3:-11475098 | MS.gene22404:CDS |
| GGGAAATCACGCGTACCCTT+AGG | 0.477420 | 7.3:+11475447 | None:intergenic |
| ACATAACATTGTTTGTGCCT+TGG | 0.480651 | 7.3:-11467604 | MS.gene22404:CDS |
| CGTGGCCTTGCTTATTACAC+TGG | 0.483778 | 7.3:-11469729 | MS.gene22404:CDS |
| TTCTGAGTGGCAAAGGGGTA+TGG | 0.491732 | 7.3:-11466976 | MS.gene22404:CDS |
| TCTATCACAGGAGGCTGTCC+AGG | 0.492263 | 7.3:-11470553 | MS.gene22404:CDS |
| GTGGAGGGTTTGACATTGAA+AGG | 0.493937 | 7.3:+11475594 | None:intergenic |
| GCCGCTGGTAGAATCGGTCT+CGG | 0.496944 | 7.3:+11475539 | None:intergenic |
| TGCGTTGTCTCCTACTCCTC+CGG | 0.498407 | 7.3:-11475505 | MS.gene22404:CDS |
| CAGTGGAATATGGATATCAT+TGG | 0.499393 | 7.3:-11472338 | MS.gene22404:CDS |
| CGTGTCAAAATTCTCTCCAC+TGG | 0.500301 | 7.3:-11466951 | MS.gene22404:CDS |
| ACTTCAAGGGTGTGCTGCTA+TGG | 0.501860 | 7.3:-11467574 | MS.gene22404:CDS |
| GCTGATGACATTCCTGCTTG+TGG | 0.502207 | 7.3:-11468779 | MS.gene22404:CDS |
| GCCAAAGAAGGAGTAAGTTC+AGG | 0.503115 | 7.3:+11472633 | None:intergenic |
| ACCTGAAAATATGTTTGGCA+AGG | 0.503204 | 7.3:-11471027 | MS.gene22404:CDS |
| GGAACGGTGAAGAGGAGAGT+TGG | 0.503980 | 7.3:+11475616 | None:intergenic |
| AAAGAACTTGCAATAGCTCC+TGG | 0.505194 | 7.3:+11470535 | None:intergenic |
| CTCCGAGCTATCTGTGGTGG+TGG | 0.506968 | 7.3:-11468833 | MS.gene22404:CDS |
| TGTACTTGCAAGCTGAGCTC+TGG | 0.507893 | 7.3:+11467624 | None:intergenic |
| CGCACCAGACCGGCCGCCGC+TGG | 0.512867 | 7.3:+11475524 | None:intergenic |
| CCAACAGTGAACCACTTCAA+TGG | 0.513257 | 7.3:+11472413 | None:intergenic |
| GGAATTACAGAATCAGATGT+TGG | 0.513279 | 7.3:-11471778 | MS.gene22404:CDS |
| AATGCCTCGGACTCAAGCAC+TGG | 0.516330 | 7.3:+11475116 | None:intergenic |
| ATCACCAGCCTTGCCAAAGA+AGG | 0.517000 | 7.3:+11472621 | None:intergenic |
| CGCAATCGCATTTCTTCGGG+CGG | 0.522443 | 7.3:+11475426 | None:intergenic |
| AGAGAGGCTCGGAGGGAGTG+GGG | 0.527244 | 7.3:-11469838 | MS.gene22404:CDS |
| CAACAGTTGCTCAGAGAGAA+GGG | 0.528047 | 7.3:-11467654 | MS.gene22404:intron |
| CCATTGAAGTGGTTCACTGT+TGG | 0.531184 | 7.3:-11472413 | MS.gene22404:CDS |
| TAGGAAATTCTGAGTGGCAA+AGG | 0.533148 | 7.3:-11466983 | MS.gene22404:CDS |
| AGGAGAGGAGATTAAGGACC+AGG | 0.533987 | 7.3:-11475078 | MS.gene22404:intron |
| GCAACAGTTGCTCAGAGAGA+AGG | 0.536005 | 7.3:-11467655 | MS.gene22404:intron |
| GCAAGGCTGGTGATACAGAA+AGG | 0.536792 | 7.3:-11472612 | MS.gene22404:CDS |
| TCTCCTACTCCTCCGGTCAC+CGG | 0.544407 | 7.3:-11475498 | MS.gene22404:CDS |
| AATCGACGTGAATCCTCCTA+AGG | 0.547709 | 7.3:-11475463 | MS.gene22404:CDS |
| TGGAGGGTTTGACATTGAAA+GGG | 0.551825 | 7.3:+11475595 | None:intergenic |
| CCCTTGAAGTTCTTCATCCA+AGG | 0.553738 | 7.3:+11467587 | None:intergenic |
| AAATCACGCGTACCCTTAGG+AGG | 0.557442 | 7.3:+11475450 | None:intergenic |
| TCGCCGGTGACCGGAGGAGT+AGG | 0.557747 | 7.3:+11475495 | None:intergenic |
| CAGTGGAATCTGACGGTGGA+GGG | 0.560948 | 7.3:+11475579 | None:intergenic |
| AGAGTTGGTGTGTGAGTGAA+CGG | 0.561460 | 7.3:+11475631 | None:intergenic |
| ATTTAAGGTTTCTAGTCGAA+AGG | 0.563806 | 7.3:-11471755 | MS.gene22404:intron |
| GACCACCACCACAGATAGCT+CGG | 0.565388 | 7.3:+11468831 | None:intergenic |
| CCACTTCAATGGTAGTGATA+CGG | 0.565478 | 7.3:+11472424 | None:intergenic |
| CCGATTCTACCAGCGGCGGC+CGG | 0.571294 | 7.3:-11475533 | MS.gene22404:CDS |
| TAGGAGACAACGCACCAGAC+CGG | 0.574351 | 7.3:+11475514 | None:intergenic |
| GAAAGCTCTTGGTCTATCAC+AGG | 0.575882 | 7.3:-11470565 | MS.gene22404:CDS |
| TGAATTTAGAGAGGCTCGGA+GGG | 0.577193 | 7.3:-11469845 | MS.gene22404:intron |
| GTTCGTTAGGAAAGCAGGAG+AGG | 0.578818 | 7.3:-11475093 | MS.gene22404:CDS |
| GAGGCTCGGAGGGAGTGGGG+AGG | 0.582108 | 7.3:-11469835 | MS.gene22404:CDS |
| TGAACTTCGCCGGTGACCGG+AGG | 0.586827 | 7.3:+11475489 | None:intergenic |
| TATTCCACTGGTAGTGCTCA+CGG | 0.588018 | 7.3:+11472351 | None:intergenic |
| CAAGGCTGGTGATACAGAAA+GGG | 0.591824 | 7.3:-11472611 | MS.gene22404:intron |
| TGTGTGAGTGAACGGAAAAT+AGG | 0.591994 | 7.3:+11475639 | None:intergenic |
| CCGTATCACTACCATTGAAG+TGG | 0.593455 | 7.3:-11472424 | MS.gene22404:CDS |
| ACAGTGGAATCTGACGGTGG+AGG | 0.593494 | 7.3:+11475578 | None:intergenic |
| GGTTTGACATTGAAAGGGAA+CGG | 0.593636 | 7.3:+11475600 | None:intergenic |
| TCTCAAACAGCTATTCTCAC+TGG | 0.596116 | 7.3:-11469802 | MS.gene22404:CDS |
| CAATGATATCCATATTCCAC+TGG | 0.596606 | 7.3:+11472339 | None:intergenic |
| GCCTTGGATGAAGAACTTCA+AGG | 0.603043 | 7.3:-11467588 | MS.gene22404:CDS |
| GGTTCACTGTTGGACAATGT+TGG | 0.604004 | 7.3:-11472403 | MS.gene22404:CDS |
| ATTGAAAGGGAACGGTGAAG+AGG | 0.606097 | 7.3:+11475608 | None:intergenic |
| CCAAATCCAAAACCACAAGC+AGG | 0.611173 | 7.3:+11468767 | None:intergenic |
| CACATACATACCATAACCCC+AGG | 0.611623 | 7.3:+11472311 | None:intergenic |
| GCAATCGCATTTCTTCGGGC+GGG | 0.612392 | 7.3:+11475427 | None:intergenic |
| GGATATCATTGGTGTTCCTG+GGG | 0.612623 | 7.3:-11472327 | MS.gene22404:CDS |
| CAATGCCAGTGTAATAAGCA+AGG | 0.613142 | 7.3:+11469724 | None:intergenic |
| TCGTTTGAAGAAAGTAACAA+TGG | 0.617916 | 7.3:+11471804 | None:intergenic |
| TGGTTGAATTTAGAGAGGCT+CGG | 0.621474 | 7.3:-11469849 | MS.gene22404:intron |
| AAAGAGCGGACCTTCTAACT+CGG | 0.622357 | 7.3:+11470497 | None:intergenic |
| CTCCACTGGTGAACAATACG+AGG | 0.626065 | 7.3:-11466937 | MS.gene22404:CDS |
| TCACTGTTGGACAATGTTGG+CGG | 0.626392 | 7.3:-11472400 | MS.gene22404:CDS |
| TTTCCTAACGAACAATGCCT+CGG | 0.643402 | 7.3:+11475103 | None:intergenic |
| AAGCTCCGAGCTATCTGTGG+TGG | 0.643646 | 7.3:-11468836 | MS.gene22404:CDS |
| GGAAAGCTCCGAGCTATCTG+TGG | 0.644865 | 7.3:-11468839 | MS.gene22404:CDS |
| AGCTCTTGGTCTATCACAGG+AGG | 0.646723 | 7.3:-11470562 | MS.gene22404:CDS |
| CCTTGGATGAAGAACTTCAA+GGG | 0.647475 | 7.3:-11467587 | MS.gene22404:CDS |
| GCCGAGACCGATTCTACCAG+CGG | 0.650921 | 7.3:-11475540 | MS.gene22404:CDS |
| AACCTCGTATTGTTCACCAG+TGG | 0.653526 | 7.3:+11466935 | None:intergenic |
| ATCGACGTGAATCCTCCTAA+GGG | 0.655052 | 7.3:-11475462 | MS.gene22404:CDS |
| GAGTGCACAGTGGAATCTGA+CGG | 0.659937 | 7.3:+11475572 | None:intergenic |
| GTAATCGCCGTGTTGCATTG+AGG | 0.663414 | 7.3:-11472656 | MS.gene22404:CDS |
| TTGAATTTAGAGAGGCTCGG+AGG | 0.669866 | 7.3:-11469846 | MS.gene22404:intron |
| GCGGTATGAGAGAATGACAA+GGG | 0.676411 | 7.3:-11472381 | MS.gene22404:CDS |
| GTTCAGGCCTCAATGCAACA+CGG | 0.681935 | 7.3:+11472649 | None:intergenic |
| GGAAATTCTGAGTGGCAAAG+GGG | 0.695274 | 7.3:-11466981 | MS.gene22404:CDS |
| CCACTGTGCACTCTCCCAAG+CGG | 0.704619 | 7.3:-11475562 | MS.gene22404:CDS |
| GGCGGTATGAGAGAATGACA+AGG | 0.707468 | 7.3:-11472382 | MS.gene22404:CDS |
| CGGTATGAGAGAATGACAAG+GGG | 0.708276 | 7.3:-11472380 | MS.gene22404:CDS |
| CTAATGTAGTAATTGAAACG+CGG | 0.709241 | 7.3:+11475663 | None:intergenic |
| TGCACAGTGGAATCTGACGG+TGG | 0.724350 | 7.3:+11475575 | None:intergenic |
| GAGACCGATTCTACCAGCGG+CGG | 0.724522 | 7.3:-11475537 | MS.gene22404:CDS |
| GTCGCCGTGAGCACTACCAG+TGG | 0.740173 | 7.3:-11472355 | MS.gene22404:CDS |
| CCGCTTGGGAGAGTGCACAG+TGG | 0.741033 | 7.3:+11475562 | None:intergenic |
| TATTAGTAGGAAATTCTGAG+TGG | 0.746821 | 7.3:-11466989 | MS.gene22404:CDS |
| GGTATGAGAGAATGACAAGG+GGG | 0.786024 | 7.3:-11472379 | MS.gene22404:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 11466914 | 11475727 | 11466914 | ID=MS.gene22404 |
| chr7.3 | mRNA | 11466914 | 11475727 | 11466914 | ID=MS.gene22404.t1;Parent=MS.gene22404 |
| chr7.3 | exon | 11475398 | 11475727 | 11475398 | ID=MS.gene22404.t1.exon1;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11475398 | 11475727 | 11475398 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| chr7.3 | exon | 11475079 | 11475174 | 11475079 | ID=MS.gene22404.t1.exon2;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11475079 | 11475174 | 11475079 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| chr7.3 | exon | 11472612 | 11472700 | 11472612 | ID=MS.gene22404.t1.exon3;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11472612 | 11472700 | 11472612 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| chr7.3 | exon | 11472322 | 11472451 | 11472322 | ID=MS.gene22404.t1.exon4;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11472322 | 11472451 | 11472322 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| chr7.3 | exon | 11471756 | 11471848 | 11471756 | ID=MS.gene22404.t1.exon5;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11471756 | 11471848 | 11471756 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| chr7.3 | exon | 11471007 | 11471081 | 11471007 | ID=MS.gene22404.t1.exon6;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11471007 | 11471081 | 11471007 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| chr7.3 | exon | 11470508 | 11470625 | 11470508 | ID=MS.gene22404.t1.exon7;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11470508 | 11470625 | 11470508 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| chr7.3 | exon | 11469716 | 11469858 | 11469716 | ID=MS.gene22404.t1.exon8;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11469716 | 11469858 | 11469716 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| chr7.3 | exon | 11468748 | 11468876 | 11468748 | ID=MS.gene22404.t1.exon9;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11468748 | 11468876 | 11468748 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| chr7.3 | exon | 11467507 | 11467670 | 11467507 | ID=MS.gene22404.t1.exon10;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11467507 | 11467670 | 11467507 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| chr7.3 | exon | 11466914 | 11467052 | 11466914 | ID=MS.gene22404.t1.exon11;Parent=MS.gene22404.t1 |
| chr7.3 | CDS | 11466914 | 11467052 | 11466914 | ID=cds.MS.gene22404.t1;Parent=MS.gene22404.t1 |
| Gene Sequence |
| Protein sequence |
