Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055930.t1 | AES80930.2 | 73.5 | 498 | 48 | 3 | 3 | 440 | 158 | 631 | 1.00E-186 | 662.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055930.t1 | Q8GZQ3 | 56.9 | 499 | 129 | 5 | 3 | 440 | 160 | 633 | 7.7e-143 | 508.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055930.t1 | G7L1J6 | 73.5 | 498 | 48 | 3 | 3 | 440 | 158 | 631 | 7.4e-187 | 662.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050301 | MS.gene055930 | 0.817823 | 2.70E-52 | -1.69E-46 |
| MS.gene050767 | MS.gene055930 | 0.812408 | 4.30E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene055930 | 0.811534 | 6.67E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene055930 | 0.805358 | 1.39E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene055930 | 0.833861 | 4.18E-56 | -1.69E-46 |
| MS.gene054123 | MS.gene055930 | 0.829273 | 5.64E-55 | -1.69E-46 |
| MS.gene054376 | MS.gene055930 | 0.816144 | 6.43E-52 | -1.69E-46 |
| MS.gene05455 | MS.gene055930 | 0.83575 | 1.40E-56 | -1.69E-46 |
| MS.gene054802 | MS.gene055930 | 0.826319 | 2.90E-54 | -1.69E-46 |
| MS.gene054803 | MS.gene055930 | 0.82698 | 2.01E-54 | -1.69E-46 |
| MS.gene054804 | MS.gene055930 | 0.828043 | 1.12E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene055930 | 0.820457 | 6.79E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene055930 | 0.801603 | 8.33E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene058293 | 0.811195 | 7.91E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene058660 | 0.817765 | 2.78E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene05907 | 0.804346 | 2.26E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene05959 | 0.814476 | 1.51E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene059676 | 0.818048 | 2.40E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene059960 | 0.819549 | 1.10E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene061200 | 0.82721 | 1.77E-54 | -1.69E-46 |
| MS.gene055930 | MS.gene061470 | 0.81986 | 9.30E-53 | -1.69E-46 |
| MS.gene055930 | MS.gene061476 | 0.817475 | 3.23E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene061788 | 0.80022 | 1.60E-48 | -1.69E-46 |
| MS.gene055930 | MS.gene062324 | 0.812878 | 3.40E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene063074 | 0.824036 | 1.00E-53 | -1.69E-46 |
| MS.gene055930 | MS.gene064481 | 0.803827 | 2.90E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene065477 | 0.832254 | 1.05E-55 | -1.69E-46 |
| MS.gene055930 | MS.gene066053 | 0.805796 | 1.12E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene068082 | 0.825211 | 5.30E-54 | -1.69E-46 |
| MS.gene055930 | MS.gene071613 | 0.804963 | 1.68E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene07164 | 0.850254 | 1.91E-60 | -1.69E-46 |
| MS.gene055930 | MS.gene072568 | 0.816112 | 6.54E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene072571 | 0.81646 | 5.47E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene073090 | 0.82281 | 1.94E-53 | -1.69E-46 |
| MS.gene055930 | MS.gene073354 | 0.800899 | 1.16E-48 | -1.69E-46 |
| MS.gene055930 | MS.gene07619 | 0.804016 | 2.64E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene08136 | 0.830164 | 3.43E-55 | -1.69E-46 |
| MS.gene055930 | MS.gene20177 | 0.801365 | 9.32E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene20686 | 0.83914 | 1.89E-57 | -1.69E-46 |
| MS.gene055930 | MS.gene21136 | 0.825964 | 3.52E-54 | -1.69E-46 |
| MS.gene055930 | MS.gene21530 | 0.803491 | 3.40E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene21953 | 0.8154 | 9.43E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene22224 | 0.800686 | 1.28E-48 | -1.69E-46 |
| MS.gene055930 | MS.gene22292 | 0.819668 | 1.03E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene22404 | 0.828793 | 7.38E-55 | -1.69E-46 |
| MS.gene055930 | MS.gene23137 | 0.813726 | 2.21E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene23141 | 0.812172 | 4.85E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene24695 | 0.840948 | 6.39E-58 | -1.69E-46 |
| MS.gene055930 | MS.gene24730 | 0.824607 | 7.36E-54 | -1.69E-46 |
| MS.gene055930 | MS.gene26340 | 0.814784 | 1.29E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene28067 | 0.809533 | 1.81E-50 | -1.69E-46 |
| MS.gene055930 | MS.gene28129 | 0.802907 | 4.49E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene28998 | 0.815253 | 1.02E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene29001 | 0.838222 | 3.27E-57 | -1.69E-46 |
| MS.gene055930 | MS.gene29004 | 0.821551 | 3.80E-53 | -1.69E-46 |
| MS.gene055930 | MS.gene29091 | 0.824805 | 6.61E-54 | -1.69E-46 |
| MS.gene055930 | MS.gene30877 | 0.80138 | 9.25E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene31809 | 0.815497 | 8.97E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene32354 | 0.841038 | 6.05E-58 | -1.69E-46 |
| MS.gene055930 | MS.gene32705 | 0.81561 | 8.47E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene32707 | 0.813974 | 1.95E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene33855 | 0.804083 | 2.56E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene34231 | 0.801125 | 1.04E-48 | -1.69E-46 |
| MS.gene055930 | MS.gene34454 | 0.80306 | 4.17E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene34456 | 0.801664 | 8.09E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene34831 | 0.809237 | 2.09E-50 | -1.69E-46 |
| MS.gene055930 | MS.gene36648 | 0.811374 | 7.23E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene38579 | 0.817928 | 2.56E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene38600 | 0.819635 | 1.05E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene40212 | 0.802601 | 5.19E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene42533 | 0.820506 | 6.62E-53 | -1.69E-46 |
| MS.gene055930 | MS.gene42667 | 0.816093 | 6.60E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene42992 | 0.815646 | 8.31E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene47398 | 0.804094 | 2.55E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene50731 | 0.801199 | 1.01E-48 | -1.69E-46 |
| MS.gene055930 | MS.gene58013 | 0.80107 | 1.07E-48 | -1.69E-46 |
| MS.gene055930 | MS.gene58279 | 0.801611 | 8.30E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene60391 | 0.827887 | 1.22E-54 | -1.69E-46 |
| MS.gene055930 | MS.gene60813 | 0.815375 | 9.55E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene60856 | 0.806374 | 8.49E-50 | -1.69E-46 |
| MS.gene055930 | MS.gene62901 | 0.804258 | 2.36E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene66260 | 0.804362 | 2.24E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene66262 | 0.810981 | 8.80E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene68122 | 0.830777 | 2.43E-55 | -1.69E-46 |
| MS.gene055930 | MS.gene68125 | 0.833781 | 4.38E-56 | -1.69E-46 |
| MS.gene055930 | MS.gene68127 | 0.821115 | 4.79E-53 | -1.69E-46 |
| MS.gene055930 | MS.gene68135 | 0.837652 | 4.58E-57 | -1.69E-46 |
| MS.gene055930 | MS.gene68723 | 0.831766 | 1.39E-55 | -1.69E-46 |
| MS.gene055930 | MS.gene68858 | 0.854813 | 9.59E-62 | -1.69E-46 |
| MS.gene055930 | MS.gene68962 | 0.846162 | 2.58E-59 | -1.69E-46 |
| MS.gene055930 | MS.gene68963 | 0.824835 | 6.51E-54 | -1.69E-46 |
| MS.gene055930 | MS.gene68964 | 0.808549 | 2.93E-50 | -1.69E-46 |
| MS.gene055930 | MS.gene68967 | 0.856109 | 4.02E-62 | -1.69E-46 |
| MS.gene055930 | MS.gene68968 | 0.857449 | 1.62E-62 | -1.69E-46 |
| MS.gene055930 | MS.gene69006 | 0.804025 | 2.63E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene69027 | 0.801668 | 8.08E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene70544 | 0.805973 | 1.03E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene70703 | 0.824469 | 7.94E-54 | -1.69E-46 |
| MS.gene055930 | MS.gene71136 | 0.843236 | 1.59E-58 | -1.69E-46 |
| MS.gene055930 | MS.gene71330 | 0.810025 | 1.42E-50 | -1.69E-46 |
| MS.gene055930 | MS.gene71948 | 0.835365 | 1.75E-56 | -1.69E-46 |
| MS.gene055930 | MS.gene72005 | 0.820512 | 6.60E-53 | -1.69E-46 |
| MS.gene055930 | MS.gene72364 | 0.819109 | 1.38E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene75994 | 0.80238 | 5.77E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene76214 | 0.802469 | 5.53E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene76532 | 0.800783 | 1.23E-48 | -1.69E-46 |
| MS.gene055930 | MS.gene78200 | 0.805232 | 1.47E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene79342 | 0.813083 | 3.06E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene80178 | 0.818058 | 2.39E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene83767 | 0.80554 | 1.27E-49 | -1.69E-46 |
| MS.gene055930 | MS.gene85449 | 0.818692 | 1.72E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene91483 | 0.814651 | 1.38E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene92749 | 0.808394 | 3.16E-50 | -1.69E-46 |
| MS.gene055930 | MS.gene99139 | 0.83035 | 3.09E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055930.t1 | MTR_7g086640 | 73.494 | 498 | 48 | 3 | 3 | 440 | 158 | 631 | 0.0 | 657 |
| MS.gene055930.t1 | MTR_6g005460 | 30.809 | 383 | 183 | 10 | 3 | 380 | 116 | 421 | 2.88e-38 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055930.t1 | AT3G03710 | 56.112 | 499 | 133 | 5 | 3 | 440 | 160 | 633 | 1.05e-167 | 495 |
| MS.gene055930.t1 | AT5G14580 | 30.548 | 383 | 184 | 8 | 3 | 380 | 124 | 429 | 1.10e-35 | 140 |
Find 98 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGGAGATATGGACTTTA+AGG | 0.129280 | 7.3:-22289437 | None:intergenic |
| GTTCTTGATACCAAGGATTT+TGG | 0.181731 | 7.3:-22289511 | MS.gene055930:CDS |
| ATTGAAAGGGCTTTCCTTCT+TGG | 0.202611 | 7.3:+22293866 | None:intergenic |
| AAGCCACAGCTTGAGTTAAT+TGG | 0.228853 | 7.3:+22292183 | None:intergenic |
| GCTTTAAGTAGCTTCTCTTC+TGG | 0.262614 | 7.3:+22295599 | None:intergenic |
| CTTATTCTGTCCGACATAAC+TGG | 0.336072 | 7.3:-22289472 | MS.gene055930:CDS |
| CTTTAAGTAGCTTCTCTTCT+GGG | 0.345776 | 7.3:+22295600 | None:intergenic |
| TTAATTGGACGAATTTCATT+TGG | 0.346612 | 7.3:+22292198 | None:intergenic |
| TAATTGGACGAATTTCATTT+GGG | 0.348167 | 7.3:+22292199 | None:intergenic |
| TTATTTGTAGATTGATTGAT+AGG | 0.349222 | 7.3:-22297559 | MS.gene055930:CDS |
| AAGACAATATTTGAGTTTCA+TGG | 0.351241 | 7.3:+22297504 | None:intergenic |
| CTTAAGATACTTTCAGAGAA+TGG | 0.358131 | 7.3:-22293826 | MS.gene055930:CDS |
| TTTCCTCCTCTAAAATCATA+TGG | 0.368914 | 7.3:-22295348 | MS.gene055930:CDS |
| CCTATCAAGTCCTCGATTGC+TGG | 0.374212 | 7.3:-22289550 | MS.gene055930:CDS |
| TGCTTAGCATTGCAAGATGC+TGG | 0.380361 | 7.3:-22289576 | MS.gene055930:CDS |
| CGCGTTGGTTTCCGTGGGGT+TGG | 0.393171 | 7.3:+22293676 | None:intergenic |
| TGCTGGAATTGCAATGGGTT+TGG | 0.395232 | 7.3:-22289533 | MS.gene055930:CDS |
| CTTCCCACATTTCTTAACTA+AGG | 0.399629 | 7.3:+22294933 | None:intergenic |
| CTTTCAATCGTTAGAAGAAA+AGG | 0.400514 | 7.3:-22293851 | MS.gene055930:CDS |
| TGCAGTGACAGCCAAGGAAT+CGG | 0.404139 | 7.3:+22296706 | None:intergenic |
| TGAAGATGCATCTGGAGATA+TGG | 0.404354 | 7.3:-22289446 | MS.gene055930:CDS |
| TTAAGATACTTTCAGAGAAT+GGG | 0.404443 | 7.3:-22293825 | MS.gene055930:CDS |
| GGAGTTCGAGTTGGCCTTGT+TGG | 0.411869 | 7.3:-22296354 | MS.gene055930:CDS |
| ACAACGAATAGACAATCTTA+TGG | 0.414678 | 7.3:-22291149 | MS.gene055930:CDS |
| TCCTTGGCTGTCACTGCAGC+TGG | 0.430502 | 7.3:-22296701 | MS.gene055930:CDS |
| TTCTGAGGTAGATGTGAAGT+TGG | 0.433258 | 7.3:-22292491 | MS.gene055930:CDS |
| GCAGTGACAGCCAAGGAATC+GGG | 0.436723 | 7.3:+22296707 | None:intergenic |
| ATGAAACTCAAATATTGTCT+TGG | 0.437637 | 7.3:-22297502 | MS.gene055930:CDS |
| TCGCTAGCTGTTGCTACGCT+TGG | 0.440720 | 7.3:-22291187 | MS.gene055930:CDS |
| TCGATTGCTGGAATTGCAAT+GGG | 0.446632 | 7.3:-22289538 | MS.gene055930:CDS |
| CCAGCAATCGAGGACTTGAT+AGG | 0.451046 | 7.3:+22289550 | None:intergenic |
| CCCACGTCAAAAGCAGTTGC+TGG | 0.453846 | 7.3:-22296375 | MS.gene055930:CDS |
| ATGGTTTCAGCATTATTCCT+TGG | 0.458148 | 7.3:+22293781 | None:intergenic |
| TGAAACTCAAATATTGTCTT+GGG | 0.462092 | 7.3:-22297501 | MS.gene055930:intron |
| GATGAAGAAGTAATTGTTGA+TGG | 0.466927 | 7.3:-22293730 | MS.gene055930:CDS |
| TAAAGCTGTAGAAGTTGGTC+AGG | 0.468201 | 7.3:-22295582 | MS.gene055930:intron |
| AGAGCACTTCCATGTGCTCT+AGG | 0.473089 | 7.3:+22292156 | None:intergenic |
| GAGTTGGACCTCATGCTGGC+TGG | 0.474204 | 7.3:-22296285 | MS.gene055930:CDS |
| ACTGGATCTGAAGATGCATC+TGG | 0.477890 | 7.3:-22289454 | MS.gene055930:CDS |
| GCTCAGGAGAGGCAACTTGA+TGG | 0.477964 | 7.3:+22294894 | None:intergenic |
| ATTGCATATCCCCGATTCCT+TGG | 0.479146 | 7.3:-22296717 | MS.gene055930:CDS |
| CTCGATTGCTGGAATTGCAA+TGG | 0.484276 | 7.3:-22289539 | MS.gene055930:CDS |
| CGCAGAGATTCTTGAGGACG+AGG | 0.487704 | 7.3:-22293758 | MS.gene055930:CDS |
| TCTGCGTCCTACTATGCCTA+AGG | 0.488115 | 7.3:-22297534 | MS.gene055930:CDS |
| GCTTAGCATTGCAAGATGCT+GGG | 0.488352 | 7.3:-22289575 | MS.gene055930:CDS |
| GAAGCCTTAGTTAAGAAATG+TGG | 0.488759 | 7.3:-22294937 | MS.gene055930:CDS |
| ACTAAACGCGTTGGTTTCCG+TGG | 0.493937 | 7.3:+22293670 | None:intergenic |
| AAATCCTACTTCTGAGGAGA+TGG | 0.495458 | 7.3:-22296316 | MS.gene055930:CDS |
| GTTTCATGGTAGAAGCCCTT+AGG | 0.496080 | 7.3:+22297518 | None:intergenic |
| CTCTGAGTTGGACCTCATGC+TGG | 0.496592 | 7.3:-22296289 | MS.gene055930:CDS |
| TCCATCTCCACCAAAATCCT+TGG | 0.500058 | 7.3:+22289501 | None:intergenic |
| GCATGTGACAGGGTGGGAAA+AGG | 0.500077 | 7.3:-22292236 | MS.gene055930:intron |
| CTACTTAAAGCTGTAGAAGT+TGG | 0.502196 | 7.3:-22295587 | MS.gene055930:CDS |
| TAGAAGCCCTTAGGCATAGT+AGG | 0.503563 | 7.3:+22297527 | None:intergenic |
| TTACAAGAGGTTCTATCTGC+AGG | 0.503936 | 7.3:-22291116 | MS.gene055930:intron |
| TCAACATGTTTATAAAGCTC+AGG | 0.508267 | 7.3:+22294878 | None:intergenic |
| CACAGCATGGCATCTGTTTG+TGG | 0.518135 | 7.3:-22289603 | MS.gene055930:intron |
| GGAGATGGAAAACTCTGAGT+TGG | 0.523459 | 7.3:-22296301 | MS.gene055930:CDS |
| GGACCTCATGCTGGCTGGCA+CGG | 0.523923 | 7.3:-22296280 | MS.gene055930:CDS |
| GTTAATATGCAGGAAATCGC+TGG | 0.529795 | 7.3:-22293929 | MS.gene055930:intron |
| TTTGAGGAAACGTATAGTAG+AGG | 0.539179 | 7.3:-22292443 | MS.gene055930:intron |
| CTAAACGCGTTGGTTTCCGT+GGG | 0.541130 | 7.3:+22293671 | None:intergenic |
| TGAGCTTTATAAACATGTTG+AGG | 0.555254 | 7.3:-22294876 | MS.gene055930:intron |
| TAGTGCAATATTGATGATAG+AGG | 0.557497 | 7.3:-22296256 | MS.gene055930:intron |
| CAGGGTGGGAAAAGGAGCGA+TGG | 0.562775 | 7.3:-22292228 | MS.gene055930:CDS |
| GGGTTTGGTTCTTGATACCA+AGG | 0.569830 | 7.3:-22289518 | MS.gene055930:CDS |
| CAGTGCGAGCATCTGTAATG+AGG | 0.574075 | 7.3:-22294962 | MS.gene055930:CDS |
| GTTGATGGTGAAGTTGATGA+AGG | 0.574671 | 7.3:-22293715 | MS.gene055930:CDS |
| GCAGTTGCTGGAGTTCGAGT+TGG | 0.574945 | 7.3:-22296363 | MS.gene055930:CDS |
| AAGCCTTAGTTAAGAAATGT+GGG | 0.576353 | 7.3:-22294936 | MS.gene055930:CDS |
| AGGGTGGGAAAAGGAGCGAT+GGG | 0.577844 | 7.3:-22292227 | MS.gene055930:CDS |
| CGTCCAATTAACTCAAGCTG+TGG | 0.581642 | 7.3:-22292186 | MS.gene055930:CDS |
| GTCCTCAAGAATCTCTGCGA+TGG | 0.581667 | 7.3:+22293762 | None:intergenic |
| TATAGTAAATCCTACTTCTG+AGG | 0.583150 | 7.3:-22296322 | MS.gene055930:CDS |
| TATCCGTGCCAGCCAGCATG+AGG | 0.596655 | 7.3:+22296277 | None:intergenic |
| TAAACGAGAAGGAAAGACAA+AGG | 0.596829 | 7.3:-22297798 | MS.gene055930:CDS |
| ATCTTCAGATCCAGTTATGT+CGG | 0.597877 | 7.3:+22289462 | None:intergenic |
| ACCAGCTGCAGTGACAGCCA+AGG | 0.605652 | 7.3:+22296700 | None:intergenic |
| CATTGCAATTCCAGCAATCG+AGG | 0.607395 | 7.3:+22289540 | None:intergenic |
| CTATATACTTGTCACCAACA+AGG | 0.609540 | 7.3:+22296340 | None:intergenic |
| TTAGAAACAAAATACCAAGA+AGG | 0.610216 | 7.3:-22293880 | MS.gene055930:CDS |
| CTGCGTCCTACTATGCCTAA+GGG | 0.611399 | 7.3:-22297533 | MS.gene055930:CDS |
| GGCTTATTACCTAGAGCACA+TGG | 0.613061 | 7.3:-22292165 | MS.gene055930:CDS |
| GGAAATCGCTGGTGATGAGT+TGG | 0.615709 | 7.3:-22293918 | MS.gene055930:CDS |
| AGGAAAGACAAAGGATCATG+AGG | 0.620066 | 7.3:-22297789 | MS.gene055930:intron |
| AGCATGGCATCTGTTTGTGG+AGG | 0.626639 | 7.3:-22289600 | MS.gene055930:CDS |
| AATTGGACGAATTTCATTTG+GGG | 0.629216 | 7.3:+22292200 | None:intergenic |
| TTCATATAAAGCCAACCCCA+CGG | 0.629572 | 7.3:-22293687 | MS.gene055930:CDS |
| GTGGTGCTTACTAAACGCGT+TGG | 0.631510 | 7.3:+22293661 | None:intergenic |
| TGGATGTTGATGATTACAAG+AGG | 0.640234 | 7.3:-22291129 | MS.gene055930:CDS |
| TCACAAATGATACTGCTCCA+AGG | 0.650362 | 7.3:-22293798 | MS.gene055930:CDS |
| CAGTGACAGCCAAGGAATCG+GGG | 0.657199 | 7.3:+22296708 | None:intergenic |
| AACCATCGCAGAGATTCTTG+AGG | 0.668422 | 7.3:-22293764 | MS.gene055930:CDS |
| TACGCTTGGAGATAACAAGA+TGG | 0.675088 | 7.3:-22291173 | MS.gene055930:CDS |
| ATGTTTATAAAGCTCAGGAG+AGG | 0.678928 | 7.3:+22294883 | None:intergenic |
| GTTATGTCGGACAGAATAAG+CGG | 0.679962 | 7.3:+22289475 | None:intergenic |
| TAAACGCGTTGGTTTCCGTG+GGG | 0.702525 | 7.3:+22293672 | None:intergenic |
| TTAGGCATAGTAGGACGCAG+AGG | 0.735674 | 7.3:+22297536 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 22289438 | 22297831 | 22289438 | ID=MS.gene055930 |
| chr7.3 | mRNA | 22289438 | 22297831 | 22289438 | ID=MS.gene055930.t1;Parent=MS.gene055930 |
| chr7.3 | exon | 22297790 | 22297831 | 22297790 | ID=MS.gene055930.t1.exon1;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22297790 | 22297831 | 22297790 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22297502 | 22297585 | 22297502 | ID=MS.gene055930.t1.exon2;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22297502 | 22297585 | 22297502 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22296692 | 22296756 | 22296692 | ID=MS.gene055930.t1.exon3;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22296692 | 22296756 | 22296692 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22296257 | 22296413 | 22296257 | ID=MS.gene055930.t1.exon4;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22296257 | 22296413 | 22296257 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22295583 | 22295639 | 22295583 | ID=MS.gene055930.t1.exon5;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22295583 | 22295639 | 22295583 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22295307 | 22295379 | 22295307 | ID=MS.gene055930.t1.exon6;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22295307 | 22295379 | 22295307 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22294877 | 22294988 | 22294877 | ID=MS.gene055930.t1.exon7;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22294877 | 22294988 | 22294877 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22293672 | 22293939 | 22293672 | ID=MS.gene055930.t1.exon8;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22293672 | 22293939 | 22293672 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22292444 | 22292515 | 22292444 | ID=MS.gene055930.t1.exon9;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22292444 | 22292515 | 22292444 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22292134 | 22292247 | 22292134 | ID=MS.gene055930.t1.exon10;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22292134 | 22292247 | 22292134 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22291117 | 22291209 | 22291117 | ID=MS.gene055930.t1.exon11;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22291117 | 22291209 | 22291117 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| chr7.3 | exon | 22289438 | 22289620 | 22289438 | ID=MS.gene055930.t1.exon12;Parent=MS.gene055930.t1 |
| chr7.3 | CDS | 22289438 | 22289620 | 22289438 | ID=cds.MS.gene055930.t1;Parent=MS.gene055930.t1 |
| Gene Sequence |
| Protein sequence |
