AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051877


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051877.t1 MTR_4g126910 90.464 388 27 3 1 388 1 378 0.0 717
MS.gene051877.t1 MTR_4g126910 89.434 265 19 2 1 265 1 256 6.41e-173 483
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 92 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTTTGGCCTCGTTCTTA+TGG 0.166432 8.2:-6265445 MS.gene051877:CDS
ATCTTTGGCCTCGTTCTTAT+GGG 0.226475 8.2:-6265444 MS.gene051877:CDS
ATTCGCCCTGCTGACGTTAA+TGG 0.233739 8.2:-6265385 MS.gene051877:intron
TTGAAGCATTTCAGACTAAA+AGG 0.234226 8.2:-6267809 MS.gene051877:CDS
CTCAATTTCTCCTCCCTTGA+AGG 0.247560 8.2:+6264140 None:intergenic
ATCTTACAGGGGAGCATCTT+TGG 0.274682 8.2:-6265459 MS.gene051877:intron
CTTCAAAGGGGAATAGTAAT+TGG 0.307261 8.2:+6267826 None:intergenic
TACACGCAGTATCAACTTTC+CGG 0.310484 8.2:-6268169 MS.gene051877:CDS
ATGTACATGGCAGTCTGTTA+TGG 0.311136 8.2:-6264719 MS.gene051877:CDS
CACTGAGAGTTGTTCCAAAA+TGG 0.332819 8.2:-6267117 MS.gene051877:CDS
TACTATGGGGAATGCATAAC+TGG 0.334191 8.2:-6265271 MS.gene051877:CDS
TCAAGGGGAAACAAGTACTA+TGG 0.338462 8.2:-6265286 MS.gene051877:CDS
CGGAGTATGTGAATCTTATA+TGG 0.339164 8.2:-6264061 MS.gene051877:CDS
TGTACATGGCAGTCTGTTAT+GGG 0.367519 8.2:-6264718 MS.gene051877:CDS
GTCCAAAGCAGCTTCTTTGT+TGG 0.368366 8.2:+6265225 None:intergenic
TGATAGACCAGAAGCTTCAT+TGG 0.369693 8.2:-6267296 MS.gene051877:CDS
TGCTTTCCACATTATTAGAA+TGG 0.377837 8.2:-6264178 MS.gene051877:CDS
GTTGGCTGGTCTAAGACATT+TGG 0.386468 8.2:+6265243 None:intergenic
GAAACTGGAAACGGAGGATT+AGG 0.388918 8.2:+6268116 None:intergenic
TACATTCCCAATGAAGCTTC+TGG 0.389428 8.2:+6267289 None:intergenic
TTAAAATAACCTCAGGTTAG+AGG 0.392590 8.2:-6264761 MS.gene051877:intron
ACAGGTGTGGGATGCTCTTA+AGG 0.395646 8.2:-6267338 MS.gene051877:intron
TCAAACCGCCACTACTTGTC+GGG 0.402780 8.2:-6268221 MS.gene051877:CDS
AAAGCAGCTTCTTTGTTGGC+TGG 0.406826 8.2:+6265229 None:intergenic
CCCTTACCATTAACGTCAGC+AGG 0.409584 8.2:+6265379 None:intergenic
TGGTGAATGTTGTTAGAAAC+TGG 0.410462 8.2:+6268101 None:intergenic
AGCCAACAAAGAAGCTGCTT+TGG 0.410602 8.2:-6265227 MS.gene051877:CDS
CAACTTTCCGGCGCGGCGGT+TGG 0.421785 8.2:-6268157 MS.gene051877:CDS
TCCTCACATGCATAAGTAGA+AGG 0.433646 8.2:+6267854 None:intergenic
TTAGTCTGAAATGCTTCAAA+GGG 0.436352 8.2:+6267813 None:intergenic
GACATAAATATGACCTGCTT+GGG 0.442801 8.2:+6265172 None:intergenic
GACTTACTATTCCATCCCTC+TGG 0.443630 8.2:+6267082 None:intergenic
CGACATAAATATGACCTGCT+TGG 0.447621 8.2:+6265171 None:intergenic
GTTGTTCCAAAATGGCTATC+AGG 0.449836 8.2:-6267109 MS.gene051877:CDS
CCTGGACTTCCTCCTGGTTG+TGG 0.461803 8.2:+6264692 None:intergenic
CAGTCTAACCTACCAACATT+TGG 0.463000 8.2:+6264650 None:intergenic
TTTAGTCTGAAATGCTTCAA+AGG 0.471185 8.2:+6267812 None:intergenic
TTCAAACCGCCACTACTTGT+CGG 0.475885 8.2:-6268222 MS.gene051877:CDS
TGAATGATGTGGAGCAATGA+TGG 0.497150 8.2:+6267760 None:intergenic
ATGAAGTAGATCCACCTTCA+AGG 0.498181 8.2:-6264154 MS.gene051877:CDS
TTCATTCCATTCTAATAATG+TGG 0.499048 8.2:+6264172 None:intergenic
GATAGACCAGAAGCTTCATT+GGG 0.499403 8.2:-6267295 MS.gene051877:CDS
CAAGGGGAAACAAGTACTAT+GGG 0.502340 8.2:-6265285 MS.gene051877:CDS
GAGGTGGGCACCGCCCAAGC+AGG 0.503320 8.2:-6265185 MS.gene051877:intron
AATTTCTCCTCCCTTGAAGG+TGG 0.505594 8.2:+6264143 None:intergenic
GTGTCTGAAAGGCGAAGACC+TGG 0.511249 8.2:+6264674 None:intergenic
TTGTGCAAATCAGTCAAAGA+TGG 0.511899 8.2:+6265409 None:intergenic
CATGCATAAGTAGAAGGAGT+TGG 0.513697 8.2:+6267860 None:intergenic
CGAAGACCTGGACTTCCTCC+TGG 0.513786 8.2:+6264686 None:intergenic
TTTCTAACAACATTCACCAT+TGG 0.514282 8.2:-6268097 MS.gene051877:intron
ATTGCAGAAAACGGAGAGAT+GGG 0.521782 8.2:-6264203 MS.gene051877:intron
TATTGCAGAAAACGGAGAGA+TGG 0.533665 8.2:-6264204 MS.gene051877:intron
CATATAAGATTCACATACTC+CGG 0.541628 8.2:+6264062 None:intergenic
TACTCCGGATGATCAACAAA+AGG 0.542530 8.2:+6264077 None:intergenic
CCACAACCAGGAGGAAGTCC+AGG 0.543045 8.2:-6264692 MS.gene051877:CDS
TGTTATGGGTTTCCACAACC+AGG 0.543802 8.2:-6264704 MS.gene051877:CDS
CTGAAGCAGACAAGAGGAGG+TGG 0.545836 8.2:-6265201 MS.gene051877:CDS
GGATAATCCAACCGCCGCGC+CGG 0.551390 8.2:+6268150 None:intergenic
CTTTCAGACACTCCAAATGT+TGG 0.551941 8.2:-6264662 MS.gene051877:intron
CAACATTTGGAGTGTCTGAA+AGG 0.554647 8.2:+6264663 None:intergenic
ATAAATATGACCTGCTTGGG+CGG 0.571462 8.2:+6265175 None:intergenic
GAGGATTAGGACGGCTTGCA+CGG 0.571755 8.2:+6268129 None:intergenic
TCCTTCTACTTATGCATGTG+AGG 0.574535 8.2:-6267855 MS.gene051877:CDS
GAACTGTTCCCGACAAGTAG+TGG 0.580457 8.2:+6268213 None:intergenic
TGAAGTAGATCCACCTTCAA+GGG 0.586411 8.2:-6264153 MS.gene051877:CDS
TGCGAGGGCATTAATGTACA+TGG 0.587413 8.2:-6264732 MS.gene051877:CDS
AGAAGGAGTTGGATATTCAG+AGG 0.600784 8.2:+6267871 None:intergenic
AACATGAATGACCTCTTGGT+AGG 0.607659 8.2:+6267733 None:intergenic
GGGACTCAATGGAACAAATG+TGG 0.631529 8.2:-6267982 MS.gene051877:CDS
TGGACACTGAAGCAGACAAG+AGG 0.636703 8.2:-6265207 MS.gene051877:CDS
TGGTAGGACAATGAATGATG+TGG 0.641618 8.2:+6267749 None:intergenic
TATCAGGAAAACCAGAGGGA+TGG 0.641822 8.2:-6267093 MS.gene051877:CDS
TCATTCATTGTCCTACCAAG+AGG 0.643823 8.2:-6267744 MS.gene051877:intron
AGGTTAGAGGAGATATTGCG+AGG 0.646892 8.2:-6264748 MS.gene051877:CDS
ACACTGAAGCAGACAAGAGG+AGG 0.651465 8.2:-6265204 MS.gene051877:CDS
TGAAGCAGACAAGAGGAGGT+GGG 0.657080 8.2:-6265200 MS.gene051877:CDS
GGTTAGAGGAGATATTGCGA+GGG 0.660097 8.2:-6264747 MS.gene051877:CDS
TAGTCTGAAATGCTTCAAAG+GGG 0.662090 8.2:+6267814 None:intergenic
GGGGAGTATCAAGTGACTTG+TGG 0.662339 8.2:+6268253 None:intergenic
ATGTTGTTAGAAACTGGAAA+CGG 0.664250 8.2:+6268107 None:intergenic
TTGTTAGAAACTGGAAACGG+AGG 0.667555 8.2:+6268110 None:intergenic
TGGCTATCAGGAAAACCAGA+GGG 0.668240 8.2:-6267097 MS.gene051877:CDS
AGTAGATCCACCTTCAAGGG+AGG 0.669378 8.2:-6264150 MS.gene051877:CDS
CTGTTCCCGACAAGTAGTGG+CGG 0.672425 8.2:+6268216 None:intergenic
GTATCAACTTTCCGGCGCGG+CGG 0.674326 8.2:-6268161 MS.gene051877:CDS
CTGGAAACGGAGGATTAGGA+CGG 0.677054 8.2:+6268120 None:intergenic
CCTTACCATTAACGTCAGCA+GGG 0.678653 8.2:+6265380 None:intergenic
ATGGCTATCAGGAAAACCAG+AGG 0.697894 8.2:-6267098 MS.gene051877:CDS
AAGGGGAAACAAGTACTATG+GGG 0.708705 8.2:-6265284 MS.gene051877:CDS
TATGGGTTTCCACAACCAGG+AGG 0.721276 8.2:-6264701 MS.gene051877:CDS
GCAGTATCAACTTTCCGGCG+CGG 0.745739 8.2:-6268164 MS.gene051877:CDS
GTTGTCAGCCCATAAGAACG+AGG 0.754084 8.2:+6265436 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTAAAGAATTTAGA+AGG + chr8.2:6267916-6267935 None:intergenic 10.0%
!! ATTATAAAAAACATATATCA+GGG + chr8.2:6267740-6267759 None:intergenic 10.0%
!! TATTATAAAAAACATATATC+AGG + chr8.2:6267741-6267760 None:intergenic 10.0%
!! TAAACTGATATATAAATAAG+AGG + chr8.2:6266710-6266729 None:intergenic 15.0%
!! TAGAATGAGAAAAAAAAAAA+AGG + chr8.2:6264151-6264170 None:intergenic 15.0%
!!! ACCTATTATTTCAATTTTTA+GGG - chr8.2:6264214-6264233 MS.gene051877:intron 15.0%
!!! ATATTGTTTTATGTTGAAAA+AGG - chr8.2:6267827-6267846 MS.gene051877:CDS 15.0%
!!! TACCTATTATTTCAATTTTT+AGG - chr8.2:6264213-6264232 MS.gene051877:intron 15.0%
!! AACGAAGAAGAAAAAAAATT+AGG - chr8.2:6268235-6268254 MS.gene051877:CDS 20.0%
!! AATTGGAATTTGTAACAAAA+GGG - chr8.2:6265269-6265288 MS.gene051877:CDS 20.0%
!! TAAATCTTTATTGCAGAAAA+CGG - chr8.2:6268004-6268023 MS.gene051877:intron 20.0%
!! TAATTGGAATTTGTAACAAA+AGG - chr8.2:6265268-6265287 MS.gene051877:CDS 20.0%
!! TAGATTCAATTCTTATCAAT+TGG + chr8.2:6266567-6266586 None:intergenic 20.0%
!! TATTAATCTTGCTTCTTATT+TGG - chr8.2:6267682-6267701 MS.gene051877:intron 20.0%
!! TCCCTAAAAATTGAAATAAT+AGG + chr8.2:6264218-6264237 None:intergenic 20.0%
!! TGATAGAAATTAATAGGAAT+TGG - chr8.2:6265747-6265766 MS.gene051877:intron 20.0%
!! TGATATATAAATAAGAGGAA+AGG + chr8.2:6266705-6266724 None:intergenic 20.0%
!! TTATGTAATTGTATCTTACA+GGG - chr8.2:6266745-6266764 MS.gene051877:intron 20.0%
!!! GATTTTGTTTTTGTAATAAC+AGG - chr8.2:6264860-6264879 MS.gene051877:intron 20.0%
!!! GTAAATTTTATCAGCATAAT+CGG - chr8.2:6268113-6268132 MS.gene051877:CDS 20.0%
!!! TAATTTTTTTTCTTCTTCGT+TGG + chr8.2:6268236-6268255 None:intergenic 20.0%
!!! TTTTGGATAAGAACTTATAT+GGG + chr8.2:6266658-6266677 None:intergenic 20.0%
! AAATAAGAGGAAAGGAAAAT+TGG + chr8.2:6266697-6266716 None:intergenic 25.0%
! AAGAAAAAAAATTAGGACGT+GGG - chr8.2:6268242-6268261 MS.gene051877:CDS 25.0%
! AAGTTTACAAGTAAGAAGAA+AGG + chr8.2:6265897-6265916 None:intergenic 25.0%
! AATTGAGTATAAAATAGCTC+TGG - chr8.2:6267878-6267897 MS.gene051877:CDS 25.0%
! ACTAAAAAAGTAACGAAAGT+TGG + chr8.2:6267976-6267995 None:intergenic 25.0%
! ACTGAAAATTAATCCAACTA+AGG + chr8.2:6267661-6267680 None:intergenic 25.0%
! ACTTGAAAAAAGAAGTAGTA+TGG + chr8.2:6267350-6267369 None:intergenic 25.0%
! AGTATGCTACAAAAAAAAAG+AGG + chr8.2:6265237-6265256 None:intergenic 25.0%
! ATCAACCAAAATTGTAATGT+TGG + chr8.2:6266884-6266903 None:intergenic 25.0%
! ATGACAATCAGAAACAAAAA+TGG + chr8.2:6267072-6267091 None:intergenic 25.0%
! ATGATCAGCAATCAATTAAA+AGG + chr8.2:6267103-6267122 None:intergenic 25.0%
! CAATTTATCCATAGCAAAAA+TGG + chr8.2:6267863-6267882 None:intergenic 25.0%
! CAGCAATATATTAATTGTTC+AGG + chr8.2:6267391-6267410 None:intergenic 25.0%
! CTTATGTAATTGTATCTTAC+AGG - chr8.2:6266744-6266763 MS.gene051877:intron 25.0%
! GAGATAAAATCTTAATGTCA+TGG + chr8.2:6267241-6267260 None:intergenic 25.0%
! GCTCAATTTACAATAATGTT+TGG - chr8.2:6267600-6267619 MS.gene051877:intron 25.0%
! TAGAAATGTAAAAAAACACC+AGG + chr8.2:6266601-6266620 None:intergenic 25.0%
! TATGTAATTGTATCTTACAG+GGG - chr8.2:6266746-6266765 MS.gene051877:intron 25.0%
! TCAACCAAAATTGTAATGTT+GGG + chr8.2:6266883-6266902 None:intergenic 25.0%
! TGAGAAAAAAAAAAAAGGCA+CGG + chr8.2:6264146-6264165 None:intergenic 25.0%
! TTAACAGTTTCTGAACTTAA+AGG - chr8.2:6265577-6265596 MS.gene051877:intron 25.0%
! TTACATTTCTATTACATCCT+TGG - chr8.2:6266610-6266629 MS.gene051877:intron 25.0%
! TTATCTGAGCTATTATAGTT+AGG - chr8.2:6267167-6267186 MS.gene051877:intron 25.0%
! TTCATTCCATTCTAATAATG+TGG + chr8.2:6268047-6268066 None:intergenic 25.0%
! TTCTGAACTTAAAGGAAATT+AGG - chr8.2:6265585-6265604 MS.gene051877:intron 25.0%
! TTCTTATCAATTGGTATCAA+AGG + chr8.2:6266558-6266577 None:intergenic 25.0%
!! TTTTAGCGGTATTAATGTTA+AGG - chr8.2:6265685-6265704 MS.gene051877:intron 25.0%
!! TTTTCCCAACATTACAATTT+TGG - chr8.2:6266876-6266895 MS.gene051877:intron 25.0%
!!! ACAACTGATATTAATTTGCA+AGG + chr8.2:6267292-6267311 None:intergenic 25.0%
!!! GTTTTGGATAAGAACTTATA+TGG + chr8.2:6266659-6266678 None:intergenic 25.0%
!!! TAACTTGTTTTCATTTCTCA+TGG - chr8.2:6264258-6264277 MS.gene051877:intron 25.0%
!!! TTCAAAGTGAAGGTTTTTTA+GGG + chr8.2:6265974-6265993 None:intergenic 25.0%
AAAGGTCTACTATTAGAGTT+GGG + chr8.2:6266540-6266559 None:intergenic 30.0%
AAAGTGGAACAAAGTAGAAT+TGG + chr8.2:6266123-6266142 None:intergenic 30.0%
AACATATATCAGGGATGAAA+AGG + chr8.2:6267731-6267750 None:intergenic 30.0%
AGAAAAAAAATTAGGACGTG+GGG - chr8.2:6268243-6268262 MS.gene051877:CDS 30.0%
AGCTTTACAATTGTGTTTGT+TGG + chr8.2:6264186-6264205 None:intergenic 30.0%
AGGGAGTGATAGAAATTAAT+AGG - chr8.2:6265741-6265760 MS.gene051877:intron 30.0%
ATAGCTCAGATAACTTATGA+AGG + chr8.2:6267160-6267179 None:intergenic 30.0%
ATGTTGTTAGAAACTGGAAA+CGG + chr8.2:6264112-6264131 None:intergenic 30.0%
ATTATGACCTATACTTGCAA+GGG - chr8.2:6267623-6267642 MS.gene051877:intron 30.0%
CAACACAAATCTTTCTACTT+TGG + chr8.2:6265516-6265535 None:intergenic 30.0%
CATATAAGATTCACATACTC+CGG + chr8.2:6268157-6268176 None:intergenic 30.0%
CTTGAAGTTAAAATAACCTC+AGG - chr8.2:6267448-6267467 MS.gene051877:intron 30.0%
GAAGAAAAAAAATTAGGACG+TGG - chr8.2:6268241-6268260 MS.gene051877:CDS 30.0%
GAATCTAATATAGAAGAACC+TGG - chr8.2:6266580-6266599 MS.gene051877:intron 30.0%
GTGTAATAGGAGAGATATAA+CGG + chr8.2:6266083-6266102 None:intergenic 30.0%
GTTAAATGAACGTGAATTGT+TGG - chr8.2:6267310-6267329 MS.gene051877:CDS 30.0%
TAAAAACATGAATGACCTCT+TGG + chr8.2:6264490-6264509 None:intergenic 30.0%
TAACTTATGAAGGAATTACC+AGG + chr8.2:6267150-6267169 None:intergenic 30.0%
TATAGTTAGGCATATCAGAT+GGG - chr8.2:6267180-6267199 MS.gene051877:intron 30.0%
TGCTTTCCACATTATTAGAA+TGG - chr8.2:6268038-6268057 MS.gene051877:intron 30.0%
TTAAAATAACCTCAGGTTAG+AGG - chr8.2:6267455-6267474 MS.gene051877:intron 30.0%
TTATAGTTAGGCATATCAGA+TGG - chr8.2:6267179-6267198 MS.gene051877:intron 30.0%
TTTCTAACAACATTCACCAT+TGG - chr8.2:6264119-6264138 MS.gene051877:CDS 30.0%
TTTGATGAGCATGTCATTAA+TGG - chr8.2:6265305-6265324 MS.gene051877:intron 30.0%
! ATATTCTTTTGTCTTGCCTA+AGG - chr8.2:6265658-6265677 MS.gene051877:intron 30.0%
! ATCTGATCAAGTTCCTTTTT+AGG - chr8.2:6265485-6265504 MS.gene051877:intron 30.0%
! ATGTTCATTTTCTCATTAGC+AGG + chr8.2:6265463-6265482 None:intergenic 30.0%
! GTTTTTGTAATAACAGGTGT+GGG - chr8.2:6264866-6264885 MS.gene051877:intron 30.0%
! TATATATATGTTTGTTGCCG+CGG - chr8.2:6264530-6264549 MS.gene051877:intron 30.0%
! TCTTTTAGTGAACTCATCAA+GGG - chr8.2:6266914-6266933 MS.gene051877:intron 30.0%
! TTAGTCTGAAATGCTTCAAA+GGG + chr8.2:6264406-6264425 None:intergenic 30.0%
! TTCTTTTAGTGAACTCATCA+AGG - chr8.2:6266913-6266932 MS.gene051877:intron 30.0%
! TTGAAGCATTTCAGACTAAA+AGG - chr8.2:6264407-6264426 MS.gene051877:intron 30.0%
! TTTAGTCTGAAATGCTTCAA+AGG + chr8.2:6264407-6264426 None:intergenic 30.0%
!! AAGCCAGTACCATATTTTAA+GGG + chr8.2:6264823-6264842 None:intergenic 30.0%
!! GTTATTTTCCTAAGATATCC+AGG - chr8.2:6264684-6264703 MS.gene051877:CDS 30.0%
!! TGTTTTTGTAATAACAGGTG+TGG - chr8.2:6264865-6264884 MS.gene051877:intron 30.0%
!! TTAGCTGATTTTTATATGCC+TGG - chr8.2:6265045-6265064 MS.gene051877:intron 30.0%
!! TTCAATTTTTAGGGACTCAA+TGG - chr8.2:6264223-6264242 MS.gene051877:intron 30.0%
!! TTCTAGTTTGAGATCAAGAT+GGG + chr8.2:6266276-6266295 None:intergenic 30.0%
!! TTTTGGAAAGGAATTTAGAG+TGG + chr8.2:6265850-6265869 None:intergenic 30.0%
!!! GTTCAAAGTGAAGGTTTTTT+AGG + chr8.2:6265975-6265994 None:intergenic 30.0%
!!! TCAAAGTGAAGGTTTTTTAG+GGG + chr8.2:6265973-6265992 None:intergenic 30.0%
AAAGTCTTCCATCAACATCA+TGG + chr8.2:6266053-6266072 None:intergenic 35.0%
AAGAAAGACACCATGTTAAG+TGG + chr8.2:6264959-6264978 None:intergenic 35.0%
ACCAGATTTCATGAATACCA+AGG + chr8.2:6266630-6266649 None:intergenic 35.0%
AGAAGAAAGGAAGATTAGTG+AGG + chr8.2:6265884-6265903 None:intergenic 35.0%
AGACCCTTAAAATATGGTAC+TGG - chr8.2:6264817-6264836 MS.gene051877:intron 35.0%
AGAGAGTAATCGCATAATTG+AGG - chr8.2:6265626-6265645 MS.gene051877:intron 35.0%
AGATTAGTGAGGGTTATCTT+TGG + chr8.2:6265873-6265892 None:intergenic 35.0%
AGCATGTCATTAATGGAGAA+TGG - chr8.2:6265312-6265331 MS.gene051877:intron 35.0%
AGTAGAATTGGAACTATCAC+AGG + chr8.2:6266111-6266130 None:intergenic 35.0%
ATACTTTCTCAGTCGGTAAT+TGG - chr8.2:6265252-6265271 MS.gene051877:CDS 35.0%
ATAGTTAGGCATATCAGATG+GGG - chr8.2:6267181-6267200 MS.gene051877:intron 35.0%
ATCTTAATGTCATGGACAGA+TGG + chr8.2:6267233-6267252 None:intergenic 35.0%
ATGTCATTAATGGAGAATGG+TGG - chr8.2:6265315-6265334 MS.gene051877:intron 35.0%
ATTAGCAGGTCGTCAAATAT+CGG + chr8.2:6265449-6265468 None:intergenic 35.0%
CAAAGGTCTACTATTAGAGT+TGG + chr8.2:6266541-6266560 None:intergenic 35.0%
CAAGCAGGTCATATTTATGT+CGG - chr8.2:6267046-6267065 MS.gene051877:intron 35.0%
CAAGGAAAACATGATCAAAG+TGG + chr8.2:6266139-6266158 None:intergenic 35.0%
CAATGCAAATCAGTATCTAG+AGG + chr8.2:6266454-6266473 None:intergenic 35.0%
CCAAACAGACCCTTAAAATA+TGG - chr8.2:6264811-6264830 MS.gene051877:intron 35.0%
CGGAGTATGTGAATCTTATA+TGG - chr8.2:6268155-6268174 MS.gene051877:CDS 35.0%
CTACAAACTGTTCAAAGTGA+AGG + chr8.2:6265984-6266003 None:intergenic 35.0%
CTTCAAAGGGGAATAGTAAT+TGG + chr8.2:6264393-6264412 None:intergenic 35.0%
CTTGAGATTCTACTGATATC+TGG - chr8.2:6267124-6267143 MS.gene051877:CDS 35.0%
GAAGAAAGGAAGATTAGTGA+GGG + chr8.2:6265883-6265902 None:intergenic 35.0%
GACATAAATATGACCTGCTT+GGG + chr8.2:6267047-6267066 None:intergenic 35.0%
GATGTTGCTCTTTGATTACT+TGG - chr8.2:6265190-6265209 MS.gene051877:CDS 35.0%
GATTATGACCTATACTTGCA+AGG - chr8.2:6267622-6267641 MS.gene051877:intron 35.0%
GGTAAAATACATGCCTTAGT+TGG - chr8.2:6267645-6267664 MS.gene051877:intron 35.0%
GTAAATCGCATAAAACTCGA+TGG - chr8.2:6265357-6265376 MS.gene051877:intron 35.0%
GTAAATTGCAACATTAGTCG+AGG + chr8.2:6267807-6267826 None:intergenic 35.0%
TACTTTGGCATGACCTAAAA+AGG + chr8.2:6265501-6265520 None:intergenic 35.0%
TCCTTGGTATTCATGAAATC+TGG - chr8.2:6266626-6266645 MS.gene051877:intron 35.0%
TCTGCATATGATAAATCACC+AGG + chr8.2:6265066-6265085 None:intergenic 35.0%
TGGTGAATGTTGTTAGAAAC+TGG + chr8.2:6264118-6264137 None:intergenic 35.0%
TGTATGCATTCCACTTAACA+TGG - chr8.2:6264946-6264965 MS.gene051877:intron 35.0%
TTATGACCTATACTTGCAAG+GGG - chr8.2:6267624-6267643 MS.gene051877:intron 35.0%
TTGTAGCATACTTTCTCAGT+CGG - chr8.2:6265245-6265264 MS.gene051877:CDS 35.0%
TTGTGCAAATCAGTCAAAGA+TGG + chr8.2:6266810-6266829 None:intergenic 35.0%
! AGGTACTTCAGAGATTTGTT+TGG - chr8.2:6265824-6265843 MS.gene051877:intron 35.0%
! ATTTTACCCCTTGCAAGTAT+AGG + chr8.2:6267633-6267652 None:intergenic 35.0%
! CAAGCCAGTACCATATTTTA+AGG + chr8.2:6264824-6264843 None:intergenic 35.0%
! CACTTTGATCATGTTTTCCT+TGG - chr8.2:6266137-6266156 MS.gene051877:intron 35.0%
! CTTTTAGTGAACTCATCAAG+GGG - chr8.2:6266915-6266934 MS.gene051877:intron 35.0%
! GAATCCTTTTGTTGATCATC+CGG - chr8.2:6268135-6268154 MS.gene051877:CDS 35.0%
! TAGTCTGAAATGCTTCAAAG+GGG + chr8.2:6264405-6264424 None:intergenic 35.0%
! TCTAGTTTGAGATCAAGATG+GGG + chr8.2:6266275-6266294 None:intergenic 35.0%
! TGTTTCAAATAATGGAGCCT+GGG + chr8.2:6266024-6266043 None:intergenic 35.0%
!! AAACAAATCTCTGAAGTACC+TGG + chr8.2:6265825-6265844 None:intergenic 35.0%
!! CCATATTTTAAGGGTCTGTT+TGG + chr8.2:6264814-6264833 None:intergenic 35.0%
!! CGAGTTTTATGCGATTTACA+CGG + chr8.2:6265356-6265375 None:intergenic 35.0%
!! GGTTTTTCAGCTGTTTTGTT+TGG - chr8.2:6265211-6265230 MS.gene051877:CDS 35.0%
!! GTTCTAGTTTGAGATCAAGA+TGG + chr8.2:6266277-6266296 None:intergenic 35.0%
!! TTGCAACTCCATTTTTGCTA+TGG - chr8.2:6267852-6267871 MS.gene051877:CDS 35.0%
!!! CAAAGTGAAGGTTTTTTAGG+GGG + chr8.2:6265972-6265991 None:intergenic 35.0%
!!! GGTTATCTTTGGTTTTGGAA+AGG + chr8.2:6265862-6265881 None:intergenic 35.0%
!!! GTTTTTTAGGGGGTATTCAA+GGG + chr8.2:6265962-6265981 None:intergenic 35.0%
AAATTGGCGACGGTTAACTT+TGG + chr8.2:6266681-6266700 None:intergenic 40.0%
AACATGAATGACCTCTTGGT+AGG + chr8.2:6264486-6264505 None:intergenic 40.0%
AACGTCTCTCAAACATTCCA+CGG - chr8.2:6264753-6264772 MS.gene051877:intron 40.0%
AACTCAAGTTCTTCCACATG+AGG + chr8.2:6266191-6266210 None:intergenic 40.0%
AAGATGGGGACTTGGAATAT+TGG + chr8.2:6266261-6266280 None:intergenic 40.0%
AAGGGGAAACAAGTACTATG+GGG - chr8.2:6266932-6266951 MS.gene051877:intron 40.0%
AGAAGGAGTTGGATATTCAG+AGG + chr8.2:6264348-6264367 None:intergenic 40.0%
AGATGGGGACTTGGAATATT+GGG + chr8.2:6266260-6266279 None:intergenic 40.0%
AGATTTGGAAGGGACTGAAA+AGG + chr8.2:6266168-6266187 None:intergenic 40.0%
ATAAATATGACCTGCTTGGG+CGG + chr8.2:6267044-6267063 None:intergenic 40.0%
ATACCGCTAAAAGAGACCTT+AGG + chr8.2:6265677-6265696 None:intergenic 40.0%
ATCACAGGAGTCTGTGTAAT+AGG + chr8.2:6266096-6266115 None:intergenic 40.0%
ATCTTTGGCCTCGTTCTTAT+GGG - chr8.2:6266772-6266791 MS.gene051877:intron 40.0%
ATGAAGTAGATCCACCTTCA+AGG - chr8.2:6268062-6268081 MS.gene051877:intron 40.0%
ATGTACATGGCAGTCTGTTA+TGG - chr8.2:6267497-6267516 MS.gene051877:intron 40.0%
ATGTGGAAGAACTTGAGTTC+AGG - chr8.2:6266192-6266211 MS.gene051877:intron 40.0%
ATTGCAGAAAACGGAGAGAT+GGG - chr8.2:6268013-6268032 MS.gene051877:intron 40.0%
ATTTCTAACAAAAACGCCCG+TGG + chr8.2:6264773-6264792 None:intergenic 40.0%
CAACATTTGATGGAAGGGAA+GGG + chr8.2:6266496-6266515 None:intergenic 40.0%
CAAGGGGAAACAAGTACTAT+GGG - chr8.2:6266931-6266950 MS.gene051877:intron 40.0%
CAAGTTCTCCTGGATATCTT+AGG + chr8.2:6264695-6264714 None:intergenic 40.0%
CACTGAGAGTTGTTCCAAAA+TGG - chr8.2:6265099-6265118 MS.gene051877:intron 40.0%
CAGTCTAACCTACCAACATT+TGG + chr8.2:6267569-6267588 None:intergenic 40.0%
CATCCTTCACAAATTGGTCA+TGG - chr8.2:6265386-6265405 MS.gene051877:CDS 40.0%
CATGACCAATTTGTGAAGGA+TGG + chr8.2:6265388-6265407 None:intergenic 40.0%
CATGACTTAAATCAAGACCG+CGG + chr8.2:6264550-6264569 None:intergenic 40.0%
CATGCATAAGTAGAAGGAGT+TGG + chr8.2:6264359-6264378 None:intergenic 40.0%
CGACATAAATATGACCTGCT+TGG + chr8.2:6267048-6267067 None:intergenic 40.0%
CTTCCCTTCCATCAAATGTT+GGG - chr8.2:6266495-6266514 MS.gene051877:intron 40.0%
CTTTCAGACACTCCAAATGT+TGG - chr8.2:6267554-6267573 MS.gene051877:intron 40.0%
GAATATTGGGAAGGAAGAAC+GGG + chr8.2:6266247-6266266 None:intergenic 40.0%
GATAGACCAGAAGCTTCATT+GGG - chr8.2:6264921-6264940 MS.gene051877:intron 40.0%
GGAATATTGGGAAGGAAGAA+CGG + chr8.2:6266248-6266267 None:intergenic 40.0%
GGATGGAATAGTAAGTCATC+TGG - chr8.2:6265140-6265159 MS.gene051877:intron 40.0%
GGTCCTCGTGTTTCAAATAA+TGG + chr8.2:6266032-6266051 None:intergenic 40.0%
GTTGTTCCAAAATGGCTATC+AGG - chr8.2:6265107-6265126 MS.gene051877:intron 40.0%
TACACGCAGTATCAACTTTC+CGG - chr8.2:6264047-6264066 MS.gene051877:CDS 40.0%
TACATTCCCAATGAAGCTTC+TGG + chr8.2:6264930-6264949 None:intergenic 40.0%
TACTATGGGGAATGCATAAC+TGG - chr8.2:6266945-6266964 MS.gene051877:intron 40.0%
TACTCCGGATGATCAACAAA+AGG + chr8.2:6268142-6268161 None:intergenic 40.0%
TAGTTAGGCATATCAGATGG+GGG - chr8.2:6267182-6267201 MS.gene051877:intron 40.0%
TATTGCAGAAAACGGAGAGA+TGG - chr8.2:6268012-6268031 MS.gene051877:intron 40.0%
TCAAGGGGAAACAAGTACTA+TGG - chr8.2:6266930-6266949 MS.gene051877:intron 40.0%
TCATTCATTGTCCTACCAAG+AGG - chr8.2:6264472-6264491 MS.gene051877:intron 40.0%
TCCTCACATGCATAAGTAGA+AGG + chr8.2:6264365-6264384 None:intergenic 40.0%
TCCTTCTACTTATGCATGTG+AGG - chr8.2:6264361-6264380 MS.gene051877:intron 40.0%
TGAACATGTCTAGTACATCC+AGG - chr8.2:6265804-6265823 MS.gene051877:intron 40.0%
TGAAGTAGATCCACCTTCAA+GGG - chr8.2:6268063-6268082 MS.gene051877:intron 40.0%
TGAATGATGTGGAGCAATGA+TGG + chr8.2:6264459-6264478 None:intergenic 40.0%
TGATAGACCAGAAGCTTCAT+TGG - chr8.2:6264920-6264939 MS.gene051877:intron 40.0%
TGGTAGGACAATGAATGATG+TGG + chr8.2:6264470-6264489 None:intergenic 40.0%
TGTACATGGCAGTCTGTTAT+GGG - chr8.2:6267498-6267517 MS.gene051877:intron 40.0%
TTAAACCCAACATCACCAAC+AGG + chr8.2:6266221-6266240 None:intergenic 40.0%
TTCCCTTCCATCAAATGTTG+GGG - chr8.2:6266496-6266515 MS.gene051877:intron 40.0%
TTCTTCCACATGAGGAGATT+TGG + chr8.2:6266183-6266202 None:intergenic 40.0%
TTGTTAGAAACTGGAAACGG+AGG + chr8.2:6264109-6264128 None:intergenic 40.0%
! AAAAAAAAGGCACGGACCAA+TGG + chr8.2:6264138-6264157 None:intergenic 40.0%
! CAACATTTGGAGTGTCTGAA+AGG + chr8.2:6267556-6267575 None:intergenic 40.0%
! GCTCCATTATTTGAAACACG+AGG - chr8.2:6266026-6266045 MS.gene051877:intron 40.0%
! GGTTTTCCTGATAGCCATTT+TGG + chr8.2:6265116-6265135 None:intergenic 40.0%
! GTGTTTCAAATAATGGAGCC+TGG + chr8.2:6266025-6266044 None:intergenic 40.0%
! GTTTCAAATAATGGAGCCTG+GGG + chr8.2:6266023-6266042 None:intergenic 40.0%
! GTTTTATGCGATTTACACGG+CGG + chr8.2:6265353-6265372 None:intergenic 40.0%
! TTGCCTAAGGTCTCTTTTAG+CGG - chr8.2:6265671-6265690 MS.gene051877:intron 40.0%
!! GTGAGGGTTATCTTTGGTTT+TGG + chr8.2:6265867-6265886 None:intergenic 40.0%
!! GTTGTTTTCACAAGTTCTCC+TGG + chr8.2:6264705-6264724 None:intergenic 40.0%
!!! GGTTTTTTAGGGGGTATTCA+AGG + chr8.2:6265963-6265982 None:intergenic 40.0%
AAAGCAGCTTCTTTGTTGGC+TGG + chr8.2:6266990-6267009 None:intergenic 45.0%
AAGTCATCTGGTCAACTCAC+TGG - chr8.2:6265152-6265171 MS.gene051877:intron 45.0%
AATTTCTCCTCCCTTGAAGG+TGG + chr8.2:6268076-6268095 None:intergenic 45.0%
ACACACACTTACACAGAGAG+AGG - chr8.2:6265721-6265740 MS.gene051877:intron 45.0%
ACGTCTCTCAAACATTCCAC+GGG - chr8.2:6264754-6264773 MS.gene051877:intron 45.0%
AGAAGCTATCATGGCTGTGA+AGG + chr8.2:6266411-6266430 None:intergenic 45.0%
AGCCAACAAAGAAGCTGCTT+TGG - chr8.2:6266989-6267008 MS.gene051877:intron 45.0%
AGGGAAGGGAGAATTATTGG+TGG + chr8.2:6266482-6266501 None:intergenic 45.0%
AGGTTAGAGGAGATATTGCG+AGG - chr8.2:6267468-6267487 MS.gene051877:intron 45.0%
ATAAAGGGAGCAACCAGACA+CGG + chr8.2:6266354-6266373 None:intergenic 45.0%
ATGGCTATCAGGAAAACCAG+AGG - chr8.2:6265118-6265137 MS.gene051877:intron 45.0%
CACACACTTACACAGAGAGA+GGG - chr8.2:6265722-6265741 MS.gene051877:intron 45.0%
CAGACACTCCAAATGTTGGT+AGG - chr8.2:6267558-6267577 MS.gene051877:intron 45.0%
CATCTTTGGCCTCGTTCTTA+TGG - chr8.2:6266771-6266790 MS.gene051877:intron 45.0%
CCAACATTTGATGGAAGGGA+AGG + chr8.2:6266497-6266516 None:intergenic 45.0%
CCACATGAGGAGATTTGGAA+GGG + chr8.2:6266178-6266197 None:intergenic 45.0%
CCTGCTGACGTTAATGGTAA+GGG - chr8.2:6266837-6266856 MS.gene051877:intron 45.0%
CCTTACCATTAACGTCAGCA+GGG + chr8.2:6266839-6266858 None:intergenic 45.0%
CCTTCACAAATTGGTCATGG+CGG - chr8.2:6265389-6265408 MS.gene051877:CDS 45.0%
CCTTCCCTTCCATCAAATGT+TGG - chr8.2:6266494-6266513 MS.gene051877:intron 45.0%
CTCAATTTCTCCTCCCTTGA+AGG + chr8.2:6268079-6268098 None:intergenic 45.0%
CTGCTGACGTTAATGGTAAG+GGG - chr8.2:6266838-6266857 MS.gene051877:intron 45.0%
CTTGAGTTCAGGTATCCTGT+TGG - chr8.2:6266203-6266222 MS.gene051877:intron 45.0%
CTTTGAACAGTTTGTAGCCG+TGG - chr8.2:6265987-6266006 MS.gene051877:intron 45.0%
GAAACGACCCCAACATTTGA+TGG + chr8.2:6266506-6266525 None:intergenic 45.0%
GAAACTGGAAACGGAGGATT+AGG + chr8.2:6264103-6264122 None:intergenic 45.0%
GACCAATTTGTGAAGGATGG+CGG + chr8.2:6265385-6265404 None:intergenic 45.0%
GACCCCAACATTTGATGGAA+GGG + chr8.2:6266501-6266520 None:intergenic 45.0%
GACTTACTATTCCATCCCTC+TGG + chr8.2:6265137-6265156 None:intergenic 45.0%
GAGGAAAGGAAAATTGGCGA+CGG + chr8.2:6266691-6266710 None:intergenic 45.0%
GATTCTACTGATATCTGGCC+TGG - chr8.2:6267129-6267148 MS.gene051877:CDS 45.0%
GCAATATCTCCTCTAACCTG+AGG + chr8.2:6267467-6267486 None:intergenic 45.0%
GGAAGGGAAGGGAGAATTAT+TGG + chr8.2:6266485-6266504 None:intergenic 45.0%
GGACTGAAAAGGACTTTCCA+AGG + chr8.2:6266157-6266176 None:intergenic 45.0%
GGGACTCAATGGAACAAATG+TGG - chr8.2:6264234-6264253 MS.gene051877:intron 45.0%
GGTTAGAGGAGATATTGCGA+GGG - chr8.2:6267469-6267488 MS.gene051877:intron 45.0%
GTCCAAAGCAGCTTCTTTGT+TGG + chr8.2:6266994-6267013 None:intergenic 45.0%
GTGGCGGTTTGAAAAAACTG+CGG + chr8.2:6263987-6264006 None:intergenic 45.0%
TATCAGGAAAACCAGAGGGA+TGG - chr8.2:6265123-6265142 MS.gene051877:intron 45.0%
TCAAATGTTGGGGTCGTTTC+AGG - chr8.2:6266506-6266525 MS.gene051877:intron 45.0%
TCCACATGAGGAGATTTGGA+AGG + chr8.2:6266179-6266198 None:intergenic 45.0%
TGCTGACGTTAATGGTAAGG+GGG - chr8.2:6266839-6266858 MS.gene051877:intron 45.0%
TGGCGGTTTGAAAAAACTGC+GGG + chr8.2:6263986-6264005 None:intergenic 45.0%
TGGCTATCAGGAAAACCAGA+GGG - chr8.2:6265119-6265138 MS.gene051877:intron 45.0%
TGGTTGCTCCCTTTATACCA+AGG - chr8.2:6266358-6266377 MS.gene051877:intron 45.0%
TGTTATGGGTTTCCACAACC+AGG - chr8.2:6267512-6267531 MS.gene051877:intron 45.0%
TTCAAACCGCCACTACTTGT+CGG - chr8.2:6263994-6264013 MS.gene051877:CDS 45.0%
TTGAGATCAAGATGGGGACT+TGG + chr8.2:6266269-6266288 None:intergenic 45.0%
TTTGACCACCTCCTTCTCAA+AGG - chr8.2:6266324-6266343 MS.gene051877:intron 45.0%
! AGTGGTGGCCTTGGTATAAA+GGG + chr8.2:6266369-6266388 None:intergenic 45.0%
!! AGGTATCCTGTTGGTGATGT+TGG - chr8.2:6266212-6266231 MS.gene051877:intron 45.0%
!! ATCTTACAGGGGAGCATCTT+TGG - chr8.2:6266757-6266776 MS.gene051877:intron 45.0%
!! CGATTTACACGGCGGATTTT+TGG + chr8.2:6265345-6265364 None:intergenic 45.0%
!! GCGACGGTTAACTTTGGTTT+TGG + chr8.2:6266675-6266694 None:intergenic 45.0%
!! GGTATCCTGTTGGTGATGTT+GGG - chr8.2:6266213-6266232 MS.gene051877:intron 45.0%
!! GTTGGCTGGTCTAAGACATT+TGG + chr8.2:6266976-6266995 None:intergenic 45.0%
!! TGCGAGGGCATTAATGTACA+TGG - chr8.2:6267484-6267503 MS.gene051877:intron 45.0%
!!! CCTGGGGATTTTGTTTTCCA+CGG + chr8.2:6266007-6266026 None:intergenic 45.0%
ACACTGAAGCAGACAAGAGG+AGG - chr8.2:6267012-6267031 MS.gene051877:intron 50.0%
ACAGGTGTGGGATGCTCTTA+AGG - chr8.2:6264878-6264897 MS.gene051877:intron 50.0%
AGGTCGTCAAATATCGGCCA+TGG + chr8.2:6265443-6265462 None:intergenic 50.0%
AGTAGATCCACCTTCAAGGG+AGG - chr8.2:6268066-6268085 MS.gene051877:intron 50.0%
ATATCGGCCATGGCAGATTG+TGG + chr8.2:6265433-6265452 None:intergenic 50.0%
ATTCGCCCTGCTGACGTTAA+TGG - chr8.2:6266831-6266850 MS.gene051877:intron 50.0%
CACCGCCATCCTTCACAAAT+TGG - chr8.2:6265380-6265399 MS.gene051877:intron 50.0%
CACGAGGACCATGATGTTGA+TGG - chr8.2:6266042-6266061 MS.gene051877:intron 50.0%
CATGATAGCTTCTCCTCCTC+GGG - chr8.2:6266418-6266437 MS.gene051877:intron 50.0%
CCATGATAGCTTCTCCTCCT+CGG - chr8.2:6266417-6266436 MS.gene051877:intron 50.0%
CCCTGCTGACGTTAATGGTA+AGG - chr8.2:6266836-6266855 MS.gene051877:intron 50.0%
CCCTTACCATTAACGTCAGC+AGG + chr8.2:6266840-6266859 None:intergenic 50.0%
CCCTTCCAAATCTCCTCATG+TGG - chr8.2:6266175-6266194 MS.gene051877:intron 50.0%
CCGCCATGACCAATTTGTGA+AGG + chr8.2:6265392-6265411 None:intergenic 50.0%
CCGTGGAAAACAAAATCCCC+AGG - chr8.2:6266004-6266023 MS.gene051877:intron 50.0%
CGACCCCAACATTTGATGGA+AGG + chr8.2:6266502-6266521 None:intergenic 50.0%
CTGGAAACGGAGGATTAGGA+CGG + chr8.2:6264099-6264118 None:intergenic 50.0%
GAACTGTTCCCGACAAGTAG+TGG + chr8.2:6264006-6264025 None:intergenic 50.0%
GGCGGTTTGAAAAAACTGCG+GGG + chr8.2:6263985-6264004 None:intergenic 50.0%
GGCTTGCGTTTGCTTTGCTA+AGG - chr8.2:6264838-6264857 MS.gene051877:intron 50.0%
GGGGACTTGGAATATTGGGA+AGG + chr8.2:6266256-6266275 None:intergenic 50.0%
GTTGTCAGCCCATAAGAACG+AGG + chr8.2:6266783-6266802 None:intergenic 50.0%
TAGGCATATCAGATGGGGGT+TGG - chr8.2:6267186-6267205 MS.gene051877:intron 50.0%
TATGGGTTTCCACAACCAGG+AGG - chr8.2:6267515-6267534 MS.gene051877:intron 50.0%
TCAAACCGCCACTACTTGTC+GGG - chr8.2:6263995-6264014 MS.gene051877:CDS 50.0%
TGAAGCAGACAAGAGGAGGT+GGG - chr8.2:6267016-6267035 MS.gene051877:intron 50.0%
TGGACACTGAAGCAGACAAG+AGG - chr8.2:6267009-6267028 MS.gene051877:intron 50.0%
TTATACCAAGGCCACCACTG+AGG - chr8.2:6266370-6266389 MS.gene051877:intron 50.0%
! CAGTGGTGGCCTTGGTATAA+AGG + chr8.2:6266370-6266389 None:intergenic 50.0%
!! ATGGCTGTGAAGGCATTGCA+AGG + chr8.2:6266401-6266420 None:intergenic 50.0%
!! GGGGAGTATCAAGTGACTTG+TGG + chr8.2:6263966-6263985 None:intergenic 50.0%
!! TGGCTGTGAAGGCATTGCAA+GGG + chr8.2:6266400-6266419 None:intergenic 50.0%
ACGTCCACCACAATCTGCCA+TGG - chr8.2:6265423-6265442 MS.gene051877:CDS 55.0%
ATTGCAAGGGACTGCCTCAG+TGG + chr8.2:6266387-6266406 None:intergenic 55.0%
CCGAGGAGGAGAAGCTATCA+TGG + chr8.2:6266420-6266439 None:intergenic 55.0%
CTGAAGCAGACAAGAGGAGG+TGG - chr8.2:6267015-6267034 MS.gene051877:intron 55.0%
CTGTTCCCGACAAGTAGTGG+CGG + chr8.2:6264003-6264022 None:intergenic 55.0%
GAGGATTAGGACGGCTTGCA+CGG + chr8.2:6264090-6264109 None:intergenic 55.0%
GCAGTATCAACTTTCCGGCG+CGG - chr8.2:6264052-6264071 MS.gene051877:CDS 55.0%
GTGTCTGAAAGGCGAAGACC+TGG + chr8.2:6267545-6267564 None:intergenic 55.0%
TAGAGGCCACAGAATACCCG+AGG + chr8.2:6266437-6266456 None:intergenic 55.0%
TCTCCTCCTCGGGTATTCTG+TGG - chr8.2:6266428-6266447 MS.gene051877:intron 55.0%
! ACGGTGCACCTTTGAGAAGG+AGG + chr8.2:6266335-6266354 None:intergenic 55.0%
! GACACGGTGCACCTTTGAGA+AGG + chr8.2:6266338-6266357 None:intergenic 55.0%
! GTGCACCTTTGAGAAGGAGG+TGG + chr8.2:6266332-6266351 None:intergenic 55.0%
! TCTCAAAGGTGCACCGTGTC+TGG - chr8.2:6266338-6266357 MS.gene051877:intron 55.0%
AGGCCACAGAATACCCGAGG+AGG + chr8.2:6266434-6266453 None:intergenic 60.0%
CCACAACCAGGAGGAAGTCC+AGG - chr8.2:6267524-6267543 MS.gene051877:intron 60.0%
CCTGGACTTCCTCCTGGTTG+TGG + chr8.2:6267527-6267546 None:intergenic 60.0%
CGAAGACCTGGACTTCCTCC+TGG + chr8.2:6267533-6267552 None:intergenic 60.0%
GTATCAACTTTCCGGCGCGG+CGG - chr8.2:6264055-6264074 MS.gene051877:CDS 60.0%
TCGGCCATGGCAGATTGTGG+TGG + chr8.2:6265430-6265449 None:intergenic 60.0%
GACTGCCTCAGTGGTGGCCT+TGG + chr8.2:6266378-6266397 None:intergenic 65.0%
GCAAGGGACTGCCTCAGTGG+TGG + chr8.2:6266384-6266403 None:intergenic 65.0%
GGATAATCCAACCGCCGCGC+CGG + chr8.2:6264069-6264088 None:intergenic 65.0%
CAACTTTCCGGCGCGGCGGT+TGG - chr8.2:6264059-6264078 MS.gene051877:CDS 70.0%
! GAGGTGGGCACCGCCCAAGC+AGG - chr8.2:6267031-6267050 MS.gene051877:intron 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 6263953 6268285 6263953 ID=MS.gene051877
chr8.2 mRNA 6263953 6268285 6263953 ID=MS.gene051877.t1;Parent=MS.gene051877
chr8.2 exon 6268098 6268285 6268098 ID=MS.gene051877.t1.exon1;Parent=MS.gene051877.t1
chr8.2 CDS 6268098 6268285 6268098 ID=cds.MS.gene051877.t1;Parent=MS.gene051877.t1
chr8.2 exon 6267745 6268003 6267745 ID=MS.gene051877.t1.exon2;Parent=MS.gene051877.t1
chr8.2 CDS 6267745 6268003 6267745 ID=cds.MS.gene051877.t1;Parent=MS.gene051877.t1
chr8.2 exon 6267292 6267356 6267292 ID=MS.gene051877.t1.exon3;Parent=MS.gene051877.t1
chr8.2 CDS 6267292 6267356 6267292 ID=cds.MS.gene051877.t1;Parent=MS.gene051877.t1
chr8.2 exon 6267089 6267153 6267089 ID=MS.gene051877.t1.exon4;Parent=MS.gene051877.t1
chr8.2 CDS 6267089 6267153 6267089 ID=cds.MS.gene051877.t1;Parent=MS.gene051877.t1
chr8.2 exon 6265386 6265472 6265386 ID=MS.gene051877.t1.exon5;Parent=MS.gene051877.t1
chr8.2 CDS 6265386 6265472 6265386 ID=cds.MS.gene051877.t1;Parent=MS.gene051877.t1
chr8.2 exon 6265186 6265316 6265186 ID=MS.gene051877.t1.exon6;Parent=MS.gene051877.t1
chr8.2 CDS 6265186 6265316 6265186 ID=cds.MS.gene051877.t1;Parent=MS.gene051877.t1
chr8.2 exon 6264663 6264768 6264663 ID=MS.gene051877.t1.exon7;Parent=MS.gene051877.t1
chr8.2 CDS 6264663 6264768 6264663 ID=cds.MS.gene051877.t1;Parent=MS.gene051877.t1
chr8.2 exon 6263953 6264218 6263953 ID=MS.gene051877.t1.exon8;Parent=MS.gene051877.t1
chr8.2 CDS 6263953 6264218 6263953 ID=cds.MS.gene051877.t1;Parent=MS.gene051877.t1
Gene Sequence

>MS.gene051877

ATGATGACAACCACAAGTCACTTGATACTCCCCGCAGTTTTTTCAAACCGCCACTACTTGTCGGGAACAGTTCAACTTCACAATCAAAATCTCATACACGCAGTATCAACTTTCCGGCGCGGCGGTTGGATTATCCGTGCAAGCCGTCCTAATCCTCCGTTTCCAGTTTCTAACAACATTCACCATTGGTCCGTGCCTTTTTTTTTTTTCTCATTCTAATTTCATTCAATCCAACAAACACAATTGTAAAGCTAACATAATACCTATTATTTCAATTTTTAGGGACTCAATGGAACAAATGTGGCTAACTTGTTTTCATTTCTCATGGAAATGCTTGTTTTCTAGACTTGTTTCTTTTTACTTGTTATTATCTCTTAATCTTGTTGCTGTTGCCTCTGAATATCCAACTCCTTCTACTTATGCATGTGAGGATGTTGCCAATTACTATTCCCCTTTGAAGCATTTCAGACTAAAAGGTGAAAAACTCAAGAGAAAATTGAATTCCATCATTGCTCCACATCATTCATTGTCCTACCAAGAGGTCATTCATGTTTTTATATATATATATATATATATATATATATATGTTTGTTGCCGCGGTCTTGATTTAAGTCATGATTGAATAAACAATTTAATTAAGCTTCTATAGCATAAGCACTTGCGTACGAGACATGAGTCATCTGTTTAAGCAAAGATAAAATAAAGTCAAATTGTTTTCAAGTAACATATAAGTTATTTTCCTAAGATATCCAGGAGAACTTGTGAAAACAACTTATACACATGTCATAAGTTGTGTTCATAACGTCTCTCAAACATTCCACGGGCGTTTTTGTTAGAAATAAGTTTAAATAAGTCAATCCAAACAGACCCTTAAAATATGGTACTGGCTTGCGTTTGCTTTGCTAAGGATTTTGTTTTTGTAATAACAGGTGTGGGATGCTCTTAAGGTTCTTGATGCTGCTGATATTGATAGACCAGAAGCTTCATTGGGAATGTATGCATTCCACTTAACATGGTGTCTTTCTTTTTTATTTATTTCTTTATTTGCTTCACACTTTACATTGAGTGATGCTTTTTGTTTATCACATAATGTTAGCTGATTTTTATATGCCTGGTGATTTATCATATGCAGAGTCGAAATATACTCACTGAGAGTTGTTCCAAAATGGCTATCAGGAAAACCAGAGGGATGGAATAGTAAGTCATCTGGTCAACTCACTGGACTTATCATTATTTTGATGTTGCTCTTTGATTACTTGGTTTTTCAGCTGTTTTGTTTGGCCTCTTTTTTTTTGTAGCATACTTTCTCAGTCGGTAATTGGAATTTGTAACAAAAGGGTAAAAAATGCATGTTTGATGAGCATGTCATTAATGGAGAATGGTGGAAAGCCAAAAATCCGCCGTGTAAATCGCATAAAACTCGATGGCACCGCCATCCTTCACAAATTGGTCATGGCGGTTGTAAAAAAAACGTCCACCACAATCTGCCATGGCCGATATTTGACGACCTGCTAATGAGAAAATGAACATGTATCTGATCAAGTTCCTTTTTAGGTCATGCCAAAGTAGAAAGATTTGTGTTGAACTAGTGTAGACTGTATAACTTGTTTTGAGCAATTGATCTTTAACAGTTTCTGAACTTAAAGGAAATTAGGAATGTTTGTGATAATAAGAGAGAGTAATCGCATAATTGAGGATAAGAAAAATATTCTTTTGTCTTGCCTAAGGTCTCTTTTAGCGGTATTAATGTTAAGGTTATCAAACTAGCACACACACTTACACAGAGAGAGGGAGTGATAGAAATTAATAGGAATTGGATCAAAATATGTAAGAAAATGCGAGATTAATGATTGAACATGTCTAGTACATCCAGGTACTTCAGAGATTTGTTTGGCCACTCTAAATTCCTTTCCAAAACCAAAGATAACCCTCACTAATCTTCCTTTCTTCTTACTTGTAAACTTTCATTTCACTTTCTCTAACTATCTTAACAACTATGTGAGTTACCCTTGAATACCCCCTAAAAAACCTTCACTTTGAACAGTTTGTAGCCGTGGAAAACAAAATCCCCAGGCTCCATTATTTGAAACACGAGGACCATGATGTTGATGGAAGACTTTGAAGTCACCGTTATATCTCTCCTATTACACAGACTCCTGTGATAGTTCCAATTCTACTTTGTTCCACTTTGATCATGTTTTCCTTGGAAAGTCCTTTTCAGTCCCTTCCAAATCTCCTCATGTGGAAGAACTTGAGTTCAGGTATCCTGTTGGTGATGTTGGGTTTAATCACCCGTTCTTCCTTCCCAATATTCCAAGTCCCCATCTTGATCTCAAACTAGAACATCTGAATTAAATTCTAACTGAATCTGTTTGACCACCTCCTTCTCAAAGGTGCACCGTGTCTGGTTGCTCCCTTTATACCAAGGCCACCACTGAGGCAGTCCCTTGCAATGCCTTCACAGCCATGATAGCTTCTCCTCCTCGGGTATTCTGTGGCCTCTAGATACTGATTTGCATTGATCAGCCACCAATAATTCTCCCTTCCCTTCCATCAAATGTTGGGGTCGTTTCAGGATGCAATACCCAACTCTAATAGTAGACCTTTGATACCAATTGATAAGAATTGAATCTAATATAGAAGAACCTGGTGTTTTTTTACATTTCTATTACATCCTTGGTATTCATGAAATCTGGTTCTCTCCCATATAAGTTCTTATCCAAAACCAAAGTTAACCGTCGCCAATTTTCCTTTCCTCTTATTTATATATCAGTTTAAATTATATAATTCACTTATGTAATTGTATCTTACAGGGGAGCATCTTTGGCCTCGTTCTTATGGGCTGACAACTGTTCCATCTTTGACTGATTTGCACAACATTCGCCCTGCTGACGTTAATGGTAAGGGGGAAGACAGCACAATATTTTCCCAACATTACAATTTTGGTTGATATTACAAGTTTCTTTTAGTGAACTCATCAAGGGGAAACAAGTACTATGGGGAATGCATAACTGGCTCGACCAAATGTCTTAGACCAGCCAACAAAGAAGCTGCTTTGGACACTGAAGCAGACAAGAGGAGGTGGGCACCGCCCAAGCAGGTCATATTTATGTCGGCCATTTTTGTTTCTGATTGTCATTTTCGAATCCTTTTAATTGATTGCTGATCATGCTTGAGATTCTACTGATATCTGGCCTGGTAATTCCTTCATAAGTTATCTGAGCTATTATAGTTAGGCATATCAGATGGGGGTTGGAGCATTTTTACTCTTTTAAGTCCATCTGTCCATGACATTAAGATTTTATCTCTATAGCTGATATTCACAATTAATTTGTACCTTGCAAATTAATATCAGTTGTTAAATGAACGTGAATTGTTGGTGAAAGCTCTAATGCCATACTACTTCTTTTTTCAAGTAGCTCTGATGTCTTTTTACCTGAACAATTAATATATTGCTGATTCAAACATCATAACAAATATACTTTGTATTTATGTCTTGAAGTTAAAATAACCTCAGGTTAGAGGAGATATTGCGAGGGCATTAATGTACATGGCAGTCTGTTATGGGTTTCCACAACCAGGAGGAAGTCCAGGTCTTCGCCTTTCAGACACTCCAAATGTTGGTAGGTTAGACTGCTGAAGTTCTCGCTCAATTTACAATAATGTTTGGATTATGACCTATACTTGCAAGGGGTAAAATACATGCCTTAGTTGGATTAATTTTCAGTGTATTAATCTTGCTTCTTATTTGGCTGTTTATTAGTATTAATGATTACCTTTTCATCCCTGATATATGTTTTTTATAATACTGAAGTAAATAGTAATTTTATACATATTAATATTAATTTTATCCTCGACTAATGTTGCAATTTACATATTGTTTTATGTTGAAAAAGGAGTTGCAACTCCATTTTTGCTATGGATAAATTGAGTATAAAATAGCTCTGGTGTTTGATTTGTCCTTCTAAATTCTTTAATTTAATCTTTGATACTTATGAGTTTGAAAAATGATTGAAGGGTCCAACTTTCGTTACTTTTTTAGTTGAAAGTTTAAATCTTTATTGCAGAAAACGGAGAGATGGGACTGCTTTCCACATTATTAGAATGGAATGAAGTAGATCCACCTTCAAGGGAGGAGAAATTGAGAAACGAGAGAATATGTAAATTTTATCAGCATAATCGGAATCCTTTTGTTGATCATCCGGAGTATGTGAATCTTATATGGAAGCGACTTGTTTCAATGCGTGCTCATAATAATAACGATGATGATAAGAATGTCTCCAACGAAGAAGAAAAAAAATTAGGACGTGGGGCTCAATTGCTTCACTTATGA

Protein sequence

>MS.gene051877.t1

MMTTTSHLILPAVFSNRHYLSGTVQLHNQNLIHAVSTFRRGGWIIRASRPNPPFPVSNNIHHWDSMEQMWLTCFHFSWKCLFSRLVSFYLLLSLNLVAVASEYPTPSTYACEDVANYYSPLKHFRLKGEKLKRKLNSIIAPHHSLSYQEVWDALKVLDAADIDRPEASLGIVEIYSLRVVPKWLSGKPEGWNREHLWPRSYGLTTVPSLTDLHNIRPADVNVNSSRGNKYYGECITGSTKCLRPANKEAALDTEADKRRWAPPKQVRGDIARALMYMAVCYGFPQPGGSPGLRLSDTPNVENGEMGLLSTLLEWNEVDPPSREEKLRNERICKFYQHNRNPFVDHPEYVNLIWKRLVSMRAHNNNDDDKNVSNEEEKKLGRGAQLLHL