Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22545.t1 | XP_013463492.1 | 87.6 | 1240 | 101 | 7 | 1 | 1234 | 2 | 1194 | 0.00E+00 | 1958.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22545.t1 | F4K5K6 | 45.2 | 1243 | 575 | 25 | 9 | 1227 | 3 | 1163 | 6.4e-227 | 789.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22545.t1 | A0A072V6S3 | 87.6 | 1240 | 101 | 7 | 1 | 1234 | 2 | 1194 | 0.0e+00 | 1958.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049685 | MS.gene22545 | 0.817992 | 2.47E-52 | -1.69E-46 |
| MS.gene049703 | MS.gene22545 | -0.807306 | 5.39E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene22545 | 0.803604 | 3.22E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene22545 | 0.822016 | 2.97E-53 | -1.69E-46 |
| MS.gene050116 | MS.gene22545 | 0.813889 | 2.04E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene22545 | 0.810339 | 1.21E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene22545 | 0.836278 | 1.03E-56 | -1.69E-46 |
| MS.gene050763 | MS.gene22545 | 0.837198 | 5.99E-57 | -1.69E-46 |
| MS.gene050941 | MS.gene22545 | 0.80666 | 7.39E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene22545 | 0.808365 | 3.21E-50 | -1.69E-46 |
| MS.gene052994 | MS.gene22545 | 0.843083 | 1.74E-58 | -1.69E-46 |
| MS.gene053058 | MS.gene22545 | 0.800216 | 1.60E-48 | -1.69E-46 |
| MS.gene054379 | MS.gene22545 | 0.813285 | 2.77E-51 | -1.69E-46 |
| MS.gene054823 | MS.gene22545 | 0.820614 | 6.25E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene22545 | 0.839847 | 1.24E-57 | -1.69E-46 |
| MS.gene055313 | MS.gene22545 | 0.80832 | 3.28E-50 | -1.69E-46 |
| MS.gene055314 | MS.gene22545 | 0.809314 | 2.01E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene22545 | 0.800027 | 1.75E-48 | -1.69E-46 |
| MS.gene056097 | MS.gene22545 | 0.805114 | 1.56E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene22545 | 0.862287 | 5.64E-64 | -1.69E-46 |
| MS.gene056552 | MS.gene22545 | 0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene056787 | MS.gene22545 | 0.824862 | 6.41E-54 | -1.69E-46 |
| MS.gene057057 | MS.gene22545 | 0.818482 | 1.92E-52 | -1.69E-46 |
| MS.gene057451 | MS.gene22545 | -0.823144 | 1.62E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene22545 | -0.827282 | 1.71E-54 | -1.69E-46 |
| MS.gene058638 | MS.gene22545 | 0.804128 | 2.51E-49 | -1.69E-46 |
| MS.gene058639 | MS.gene22545 | 0.808505 | 3.00E-50 | -1.69E-46 |
| MS.gene058646 | MS.gene22545 | 0.82718 | 1.80E-54 | -1.69E-46 |
| MS.gene058654 | MS.gene22545 | 0.808123 | 3.61E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene22545 | 0.807614 | 4.64E-50 | -1.69E-46 |
| MS.gene059007 | MS.gene22545 | 0.801653 | 8.13E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene22545 | 0.814496 | 1.50E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene22545 | 0.809752 | 1.62E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene22545 | 0.816991 | 4.16E-52 | -1.69E-46 |
| MS.gene060296 | MS.gene22545 | 0.85374 | 1.96E-61 | -1.69E-46 |
| MS.gene060637 | MS.gene22545 | 0.806181 | 9.32E-50 | -1.69E-46 |
| MS.gene060870 | MS.gene22545 | 0.808094 | 3.67E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene22545 | 0.805554 | 1.26E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22545.t1 | MTR_2g040970 | 91.694 | 1240 | 50 | 8 | 1 | 1234 | 2 | 1194 | 0.0 | 2187 |
| MS.gene22545.t1 | MTR_2g040970 | 91.761 | 1238 | 49 | 8 | 1 | 1232 | 2 | 1192 | 0.0 | 2186 |
| MS.gene22545.t1 | MTR_4g125670 | 58.772 | 798 | 296 | 15 | 445 | 1233 | 303 | 1076 | 0.0 | 840 |
| MS.gene22545.t1 | MTR_4g125670 | 48.322 | 447 | 145 | 7 | 18 | 463 | 10 | 371 | 1.89e-101 | 347 |
| MS.gene22545.t1 | MTR_1g015120 | 37.612 | 335 | 151 | 11 | 18 | 343 | 25 | 310 | 4.92e-46 | 181 |
| MS.gene22545.t1 | MTR_6g080430 | 35.928 | 167 | 104 | 1 | 80 | 243 | 113 | 279 | 2.50e-30 | 130 |
| MS.gene22545.t1 | MTR_6g080430 | 30.928 | 194 | 112 | 6 | 744 | 928 | 514 | 694 | 3.20e-18 | 91.3 |
| MS.gene22545.t1 | MTR_8g106680 | 35.028 | 177 | 109 | 3 | 69 | 242 | 99 | 272 | 3.17e-28 | 123 |
| MS.gene22545.t1 | MTR_8g106680 | 24.180 | 488 | 226 | 16 | 744 | 1220 | 514 | 868 | 6.58e-23 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22545.t1 | AT5G20610 | 53.802 | 697 | 270 | 16 | 550 | 1227 | 500 | 1163 | 0.0 | 605 |
| MS.gene22545.t1 | AT5G20610 | 50.565 | 354 | 151 | 6 | 9 | 356 | 3 | 338 | 7.35e-96 | 333 |
| MS.gene22545.t1 | AT5G26160 | 34.970 | 672 | 317 | 16 | 570 | 1234 | 418 | 976 | 4.40e-86 | 302 |
| MS.gene22545.t1 | AT5G26160 | 41.875 | 320 | 135 | 9 | 20 | 333 | 17 | 291 | 1.15e-59 | 223 |
| MS.gene22545.t1 | AT5G26160 | 34.970 | 672 | 317 | 16 | 570 | 1234 | 418 | 976 | 4.40e-86 | 302 |
| MS.gene22545.t1 | AT5G26160 | 41.875 | 320 | 135 | 9 | 20 | 333 | 17 | 291 | 1.15e-59 | 223 |
| MS.gene22545.t1 | AT5G26160 | 35.580 | 638 | 294 | 15 | 570 | 1203 | 418 | 942 | 2.90e-85 | 299 |
| MS.gene22545.t1 | AT5G26160 | 41.875 | 320 | 135 | 9 | 20 | 333 | 17 | 291 | 9.20e-60 | 223 |
| MS.gene22545.t1 | AT1G42550 | 31.754 | 211 | 129 | 6 | 76 | 281 | 114 | 314 | 3.86e-26 | 116 |
| MS.gene22545.t1 | AT1G42550 | 28.185 | 259 | 165 | 8 | 679 | 933 | 461 | 702 | 8.97e-16 | 83.2 |
Find 296 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTATACTTGTTCGGTTTA+TGG | 0.150358 | 2.4:-49376176 | MS.gene22545:CDS |
| CATCTGGCTTATCTGTTTCT+AGG | 0.188004 | 2.4:+49375415 | None:intergenic |
| CAATTTCACAGTAGCGTTAA+TGG | 0.213500 | 2.4:-49373364 | MS.gene22545:CDS |
| CAGTGCGCCGGAGCTTGATT+TGG | 0.216747 | 2.4:-49376084 | MS.gene22545:CDS |
| CAAACCCCATTGACGCATTA+AGG | 0.220008 | 2.4:+49374516 | None:intergenic |
| AAGAAGAGTAGTGGGGTTTC+TGG | 0.221014 | 2.4:-49376611 | MS.gene22545:CDS |
| GAAGAGGAGGGACGGGGTTT+TGG | 0.224303 | 2.4:-49376252 | MS.gene22545:CDS |
| ATATGTGGATTTAGTGTTTC+CGG | 0.229953 | 2.4:+49372862 | None:intergenic |
| AGCATTTCTTCACGCATATT+TGG | 0.237343 | 2.4:-49372898 | MS.gene22545:CDS |
| TACAATTAAACCTCTTATTT+CGG | 0.258098 | 2.4:+49376348 | None:intergenic |
| GGAAGTGGACTACAAGTTTC+AGG | 0.258749 | 2.4:-49375989 | MS.gene22545:CDS |
| TCATTATCTTGACGGTCTTC+AGG | 0.265075 | 2.4:+49375360 | None:intergenic |
| GATTTGAATTCTGCAACTTT+AGG | 0.275043 | 2.4:+49374922 | None:intergenic |
| TTGCAGCATGATTCAATAAT+AGG | 0.275473 | 2.4:-49373945 | MS.gene22545:CDS |
| CGAATTTGAATTGAAATTGC+TGG | 0.276086 | 2.4:+49373863 | None:intergenic |
| TAACCTTTCTGTTCCTTCTA+AGG | 0.279800 | 2.4:+49374114 | None:intergenic |
| AATGACTCCTCTACTTTAAC+AGG | 0.280432 | 2.4:+49375294 | None:intergenic |
| GGCTCAAATGCTAGAAGATT+TGG | 0.286989 | 2.4:-49374548 | MS.gene22545:CDS |
| AGTGCGCCGGAGCTTGATTT+GGG | 0.292250 | 2.4:-49376083 | MS.gene22545:CDS |
| AATCCGAGCCTGCTGGACTA+TGG | 0.310295 | 2.4:+49374815 | None:intergenic |
| CCGAAACCGGTACAATCTTT+TGG | 0.312560 | 2.4:+49374466 | None:intergenic |
| TCATTTGGTATAATGACATT+AGG | 0.313235 | 2.4:+49372832 | None:intergenic |
| CCAAAAGATTGTACCGGTTT+CGG | 0.315466 | 2.4:-49374466 | MS.gene22545:CDS |
| GCCTCCTCTTGCCGAGGGGT+TGG | 0.325484 | 2.4:-49374404 | MS.gene22545:CDS |
| CCTCCTCTTGCCGAGGGGTT+GGG | 0.326250 | 2.4:-49374403 | MS.gene22545:CDS |
| CTTCCTTTACCCCTCGGTTT+CGG | 0.337696 | 2.4:+49376455 | None:intergenic |
| TCACGCTGGTTGCTTGCTAA+TGG | 0.341702 | 2.4:-49373027 | MS.gene22545:CDS |
| TCATGAAATGCATCAAGTTC+AGG | 0.346697 | 2.4:+49375441 | None:intergenic |
| CAGCAATTTCAATTCAAATT+CGG | 0.348752 | 2.4:-49373862 | MS.gene22545:CDS |
| ATATCAGATGCATGCACTTC+AGG | 0.349982 | 2.4:+49375528 | None:intergenic |
| TACAAAGAGGATGAATCTTC+TGG | 0.350124 | 2.4:-49375117 | MS.gene22545:CDS |
| TCGTTAACTGCATGCACTTC+AGG | 0.350509 | 2.4:+49375492 | None:intergenic |
| CATTTGGTATAATGACATTA+GGG | 0.352561 | 2.4:+49372833 | None:intergenic |
| GACTACAAGTTTCAGGTTAT+CGG | 0.359817 | 2.4:-49375982 | MS.gene22545:CDS |
| TTACCCCTCGGTTTCGGATC+AGG | 0.364182 | 2.4:+49376461 | None:intergenic |
| AACTGTCTTTGTTTAACATC+TGG | 0.365532 | 2.4:+49375825 | None:intergenic |
| ATTTCTGCAGGTACAACAAC+AGG | 0.370298 | 2.4:+49374277 | None:intergenic |
| GTATATCCATCTGGTTTGAT+TGG | 0.377018 | 2.4:+49375576 | None:intergenic |
| CGGAGGCTATCTACGATCTA+TGG | 0.378525 | 2.4:-49374359 | MS.gene22545:CDS |
| TGTTGTTGTACCTGCAGAAA+TGG | 0.384066 | 2.4:-49374275 | MS.gene22545:CDS |
| TCTTCAGGTGGTAATTGAAT+TGG | 0.384371 | 2.4:+49374439 | None:intergenic |
| CTCGGCATGGAAGGGGCTGC+TGG | 0.385370 | 2.4:-49373639 | MS.gene22545:CDS |
| ATAAAAGGTCTATATGGAAT+TGG | 0.387277 | 2.4:-49376397 | MS.gene22545:CDS |
| TAGTCAAAAGAAATTGTTAA+AGG | 0.388576 | 2.4:-49376588 | MS.gene22545:CDS |
| GGCAACGTAGGAAGCTCTTC+AGG | 0.390479 | 2.4:+49374424 | None:intergenic |
| TCAACACATTAGGAGCATTA+TGG | 0.391837 | 2.4:+49375880 | None:intergenic |
| GCCGTGATGAATGTCAGTTT+TGG | 0.394511 | 2.4:-49375945 | MS.gene22545:CDS |
| GTACCTGCAGAAATGGGTTC+CGG | 0.395115 | 2.4:-49374268 | MS.gene22545:CDS |
| TCTGCACTAGCCAGCTCAAT+AGG | 0.396238 | 2.4:-49375687 | MS.gene22545:CDS |
| AGGAGAAGAGCTCGGGGAAG+TGG | 0.397672 | 2.4:-49376004 | MS.gene22545:CDS |
| GTTAAACAAAGACAGTTTGA+TGG | 0.401336 | 2.4:-49375819 | MS.gene22545:CDS |
| ACATTAGGGTTTCTTATATG+TGG | 0.401929 | 2.4:+49372847 | None:intergenic |
| GGAGTTCAAAGGGAGGAGTT+AGG | 0.404716 | 2.4:-49373431 | MS.gene22545:CDS |
| AGAAATGGGTTCCGGGATAA+TGG | 0.405626 | 2.4:-49374260 | MS.gene22545:CDS |
| CGGTGTCTGGTTCGAATTCG+AGG | 0.406241 | 2.4:-49376511 | MS.gene22545:CDS |
| CTCCTAATGTGTTGACTTCG+AGG | 0.406506 | 2.4:-49375872 | MS.gene22545:CDS |
| CACAACCTGCTGCCACTTTG+TGG | 0.407045 | 2.4:-49372921 | MS.gene22545:CDS |
| ACATTGTTGCACAATCCATT+GGG | 0.409085 | 2.4:-49373707 | MS.gene22545:CDS |
| GATTAAACTCCCACTAGCTT+TGG | 0.409557 | 2.4:+49374315 | None:intergenic |
| GGTTGTGCCTTTGTGGTAAC+CGG | 0.409772 | 2.4:+49372937 | None:intergenic |
| AGCAGTGATGTTGGTGTTGA+TGG | 0.409955 | 2.4:-49373591 | MS.gene22545:CDS |
| GGCTGCTGGTTTGCAGCTGA+TGG | 0.412711 | 2.4:-49373625 | MS.gene22545:CDS |
| CTAAGTCTATTAGTGTCATT+TGG | 0.413102 | 2.4:+49372817 | None:intergenic |
| GAGTGGATGAAGCTGGATTC+TGG | 0.413959 | 2.4:-49373540 | MS.gene22545:CDS |
| TTTGAGAAGGAAGCCCTAGA+TGG | 0.421853 | 2.4:-49374748 | MS.gene22545:CDS |
| AGAAAAGGCGTGCAGCTCTC+TGG | 0.422171 | 2.4:-49375640 | MS.gene22545:CDS |
| GAAGCTATGCCTGCCTTAGA+AGG | 0.422956 | 2.4:-49374127 | MS.gene22545:CDS |
| CTCGAACCATCAAAAGTAGA+AGG | 0.423426 | 2.4:+49376290 | None:intergenic |
| AGAAGGATAAAAGGTCTATA+TGG | 0.423606 | 2.4:-49376403 | MS.gene22545:CDS |
| CAGAAGCCTTAATGCGTCAA+TGG | 0.424767 | 2.4:-49374522 | MS.gene22545:CDS |
| CTTCATGTACATTTGATTGA+AGG | 0.424825 | 2.4:-49376317 | MS.gene22545:CDS |
| TAGAAGTGCTTCGAGGAATT+CGG | 0.426780 | 2.4:-49376531 | MS.gene22545:CDS |
| GAAGTTGACTTATACTTGTT+CGG | 0.427532 | 2.4:-49376183 | MS.gene22545:CDS |
| GCTTCGAGGAATTCGGTGTC+TGG | 0.427810 | 2.4:-49376524 | MS.gene22545:CDS |
| AGAAGCCTTAATGCGTCAAT+GGG | 0.432208 | 2.4:-49374521 | MS.gene22545:CDS |
| TTGAAAGGAACACCACCATC+TGG | 0.432249 | 2.4:-49373894 | MS.gene22545:CDS |
| TACCTGCAGAAATGGGTTCC+GGG | 0.433085 | 2.4:-49374267 | MS.gene22545:CDS |
| AACATTGTTGCACAATCCAT+TGG | 0.433367 | 2.4:-49373708 | MS.gene22545:CDS |
| TTGGTATTCTTGAAAATTGA+GGG | 0.436431 | 2.4:+49374334 | None:intergenic |
| TTCATGTACATTTGATTGAA+GGG | 0.438607 | 2.4:-49376316 | MS.gene22545:CDS |
| TTGAATTGGACTTCCGAAAC+CGG | 0.441219 | 2.4:+49374453 | None:intergenic |
| GAGGTTGCTTCCTCTCACTT+TGG | 0.442211 | 2.4:-49376039 | MS.gene22545:CDS |
| CAGGTTATCGGGAAAGGCTA+AGG | 0.445056 | 2.4:-49375970 | MS.gene22545:CDS |
| CATTATCTTGACGGTCTTCA+GGG | 0.446875 | 2.4:+49375361 | None:intergenic |
| TTCAAGAATACCAAAGCTAG+TGG | 0.449697 | 2.4:-49374325 | MS.gene22545:CDS |
| TTTCGCATATCCGAAATAAG+AGG | 0.450279 | 2.4:-49376358 | MS.gene22545:CDS |
| CTTTGATGATGTTACAGAAT+CGG | 0.451114 | 2.4:-49374872 | MS.gene22545:CDS |
| CTTGAGGAGGAGAAGAGCTC+GGG | 0.451845 | 2.4:-49376011 | MS.gene22545:CDS |
| GGCAAAGGCATTGATATTAA+CGG | 0.456540 | 2.4:-49373666 | MS.gene22545:CDS |
| GCAGGCTTAAAAGTATCTTC+TGG | 0.456549 | 2.4:-49375216 | MS.gene22545:CDS |
| GGCAGCAGGTTGTGCCTTTG+TGG | 0.458236 | 2.4:+49372930 | None:intergenic |
| CTTTCTGTTCCTTCTAAGGC+AGG | 0.458559 | 2.4:+49374118 | None:intergenic |
| ATGGTTTGCAGAAGGATAAA+AGG | 0.458887 | 2.4:-49376412 | MS.gene22545:CDS |
| TGGTTGCTTGCTAATGGAAT+GGG | 0.460077 | 2.4:-49373021 | MS.gene22545:CDS |
| GAACAGGATGTTGTCGAGAA+TGG | 0.460373 | 2.4:-49376642 | None:intergenic |
| GCAAGCATTGGTGTTCCAAC+TGG | 0.461912 | 2.4:+49373309 | None:intergenic |
| GATGGCTATGATGCTTCTAA+TGG | 0.463402 | 2.4:-49374676 | MS.gene22545:CDS |
| GATGCTCCTTCTGAAGGTCT+TGG | 0.463583 | 2.4:+49374605 | None:intergenic |
| TCTCACTTTGGAGGAGCTTG+AGG | 0.465573 | 2.4:-49376027 | MS.gene22545:CDS |
| TTTGGTGACTCGTCCGGCTA+AGG | 0.470886 | 2.4:-49376234 | MS.gene22545:CDS |
| TAAGAAATTCGATGAAGAAA+AGG | 0.470892 | 2.4:-49375655 | MS.gene22545:CDS |
| TCAAGTAAAAGGCAGCCATC+TGG | 0.472950 | 2.4:+49375399 | None:intergenic |
| AATTGAAGATCTTGCACCGT+TGG | 0.473342 | 2.4:-49373808 | MS.gene22545:CDS |
| AACGGCTCCCTCGGCATGGA+AGG | 0.473769 | 2.4:-49373648 | MS.gene22545:CDS |
| ACCTCGACGCAGCAACAATC+TGG | 0.474072 | 2.4:-49373051 | MS.gene22545:CDS |
| TGCCTCGAAGTCAACACATT+AGG | 0.474277 | 2.4:+49375870 | None:intergenic |
| CTTGTTCGGTTTATGGAAGT+AGG | 0.476128 | 2.4:-49376169 | MS.gene22545:CDS |
| TGGAAGCAGCAGCATGAGGC+GGG | 0.476172 | 2.4:-49375799 | MS.gene22545:CDS |
| TGTATTGGAAGAGGAGGGAC+GGG | 0.477781 | 2.4:-49376259 | MS.gene22545:CDS |
| CTGGTTGCTTGCTAATGGAA+TGG | 0.477881 | 2.4:-49373022 | MS.gene22545:CDS |
| GATCCGAAACCGAGGGGTAA+AGG | 0.477971 | 2.4:-49376458 | MS.gene22545:CDS |
| AGGAGACGAGGCAAAGGCTC+CGG | 0.478503 | 2.4:-49373411 | MS.gene22545:CDS |
| AGCAGCAGCATGAGGCGGGC+CGG | 0.479074 | 2.4:-49375795 | MS.gene22545:CDS |
| CGGCTCCCTCGGCATGGAAG+GGG | 0.479079 | 2.4:-49373646 | MS.gene22545:CDS |
| CTCGTCTCAAGCTGCGGAAG+AGG | 0.479142 | 2.4:-49375745 | MS.gene22545:CDS |
| GAGCGAAATAGTAGCAAAGA+TGG | 0.479789 | 2.4:-49373190 | MS.gene22545:CDS |
| GTTGCTTCCTCTCACTTTGG+AGG | 0.482124 | 2.4:-49376036 | MS.gene22545:CDS |
| CTATTGCTTCCTTTACCCCT+CGG | 0.483586 | 2.4:+49376449 | None:intergenic |
| CAAAATCGAAGCACTTTCAA+TGG | 0.485047 | 2.4:-49373778 | MS.gene22545:CDS |
| TTTGGTATTCTTGAAAATTG+AGG | 0.485979 | 2.4:+49374333 | None:intergenic |
| GATTGTGCAACAATGTTAGA+TGG | 0.486818 | 2.4:+49373714 | None:intergenic |
| GTTGTTGTACCTGCAGAAAT+GGG | 0.488384 | 2.4:-49374274 | MS.gene22545:CDS |
| TCGAATTCGAGGTCTAAAAC+TGG | 0.489299 | 2.4:-49376500 | MS.gene22545:CDS |
| TTGCTTCATACTTCGCAGAA+TGG | 0.489554 | 2.4:+49376135 | None:intergenic |
| ACGTTGCCTCCTCTTGCCGA+GGG | 0.492415 | 2.4:-49374409 | MS.gene22545:CDS |
| ACTACAAGTTTCAGGTTATC+GGG | 0.493096 | 2.4:-49375981 | MS.gene22545:CDS |
| CTTTATCTGTGGGAGTTCAA+AGG | 0.494135 | 2.4:-49373442 | MS.gene22545:CDS |
| CAGAGCTGACATTTCCCCAA+TGG | 0.494809 | 2.4:+49373692 | None:intergenic |
| GGGCCCAACCCCTCGGCAAG+AGG | 0.494969 | 2.4:+49374400 | None:intergenic |
| TAGTGGGAGTTTAATCATGC+AGG | 0.496365 | 2.4:-49374308 | MS.gene22545:CDS |
| TACGTTGCCTCCTCTTGCCG+AGG | 0.497116 | 2.4:-49374410 | MS.gene22545:CDS |
| ATGGAATTGGAGACCGTTGA+AGG | 0.498268 | 2.4:-49376384 | MS.gene22545:CDS |
| TTTATCTGTGGGAGTTCAAA+GGG | 0.498320 | 2.4:-49373441 | MS.gene22545:CDS |
| TTACAGTGTTTGGCTTCAGT+TGG | 0.498327 | 2.4:-49374232 | MS.gene22545:CDS |
| AACTCTTTCGACTTTATCTG+TGG | 0.499981 | 2.4:-49373453 | MS.gene22545:CDS |
| AGCCCATAGTCCAGCAGGCT+CGG | 0.500368 | 2.4:-49374818 | MS.gene22545:CDS |
| GAGGGATTGAGAATACAATC+TGG | 0.501547 | 2.4:-49373756 | MS.gene22545:CDS |
| ATCCGAGCCTGCTGGACTAT+GGG | 0.503922 | 2.4:+49374816 | None:intergenic |
| ATCCCGGAACCCATTTCTGC+AGG | 0.504024 | 2.4:+49374265 | None:intergenic |
| ATTTGGAAAAGCGAAAGAAC+CGG | 0.506092 | 2.4:-49372881 | MS.gene22545:CDS |
| TCAAGCTGCGGAAGAGGTAA+AGG | 0.506259 | 2.4:-49375739 | MS.gene22545:CDS |
| GGCAAAGGAGTTAATGCCAC+TGG | 0.511777 | 2.4:-49374188 | MS.gene22545:CDS |
| GTCGAAAGAGTTAGCATGAT+GGG | 0.512946 | 2.4:+49373464 | None:intergenic |
| ACACACTGAACCACCTTAGC+CGG | 0.513179 | 2.4:+49376221 | None:intergenic |
| CCCAACCCCTCGGCAAGAGG+AGG | 0.513544 | 2.4:+49374403 | None:intergenic |
| ACGGCTCCCTCGGCATGGAA+GGG | 0.513641 | 2.4:-49373647 | MS.gene22545:CDS |
| ATCGAAGCACTTTCAATGGA+GGG | 0.515706 | 2.4:-49373774 | MS.gene22545:CDS |
| TTGAGAAGGAAGCCCTAGAT+GGG | 0.516019 | 2.4:-49374747 | MS.gene22545:CDS |
| TGCAGGTACAACAACAGGGT+TGG | 0.516777 | 2.4:+49374282 | None:intergenic |
| TATGAATAAAGCTATGTACT+TGG | 0.518447 | 2.4:-49376555 | MS.gene22545:CDS |
| TCAGAGGAAGTATATCCATC+TGG | 0.518530 | 2.4:+49375567 | None:intergenic |
| AATAGTAATGATGATAATGA+TGG | 0.518672 | 2.4:-49376431 | MS.gene22545:CDS |
| AACACCAGCGCGGCAAAAGA+TGG | 0.519605 | 2.4:-49375903 | MS.gene22545:CDS |
| CTTCTGAAGGTCTTGGAACA+AGG | 0.522914 | 2.4:+49374612 | None:intergenic |
| AGTTCAGGTGTGTCAAGCAC+TGG | 0.525135 | 2.4:+49375456 | None:intergenic |
| AAAGTGGTAAGAAGAGTAGT+GGG | 0.525318 | 2.4:-49376619 | MS.gene22545:CDS |
| GACACAGCCCATAGTCCAGC+AGG | 0.526823 | 2.4:-49374823 | MS.gene22545:CDS |
| ATGCTCCACAAAGTGGCAGC+AGG | 0.527916 | 2.4:+49372916 | None:intergenic |
| AAGTTTCAGGTTATCGGGAA+AGG | 0.529464 | 2.4:-49375976 | MS.gene22545:CDS |
| TCTTGATGAGTGGATGAAGC+TGG | 0.530315 | 2.4:-49373547 | MS.gene22545:CDS |
| TGCTTCGCTTCTCAGTGCGC+CGG | 0.533163 | 2.4:-49376096 | MS.gene22545:CDS |
| ATTGATATTAACGGCTCCCT+CGG | 0.534760 | 2.4:-49373657 | MS.gene22545:CDS |
| CACTTTGGAGGAGCTTGAGG+AGG | 0.535429 | 2.4:-49376024 | MS.gene22545:CDS |
| CAATTTCAATTCAAATTCGG+TGG | 0.536167 | 2.4:-49373859 | MS.gene22545:CDS |
| ATATAAGACGCCTATTGAGC+TGG | 0.536219 | 2.4:+49375677 | None:intergenic |
| AGAAGCTCTCTCGGAGACTC+CGG | 0.538225 | 2.4:+49374781 | None:intergenic |
| AGATGTGAGGGGAAAACAAA+GGG | 0.540666 | 2.4:-49374569 | MS.gene22545:CDS |
| GATACACAATTCTCTTGATG+AGG | 0.540957 | 2.4:-49375184 | MS.gene22545:CDS |
| TCTCTTGATGAGGCAAATGA+TGG | 0.541036 | 2.4:-49375075 | MS.gene22545:CDS |
| TCTCTTGATGAGGCAAATGA+TGG | 0.541741 | 2.4:-49375174 | MS.gene22545:CDS |
| GACAATACAACAAGTAGCAT+GGG | 0.542723 | 2.4:-49374149 | MS.gene22545:CDS |
| TGTCTTAAGAGAAGCTCTCT+CGG | 0.543137 | 2.4:+49374772 | None:intergenic |
| GGAGTTAGGAGACGAGGCAA+AGG | 0.545122 | 2.4:-49373417 | MS.gene22545:CDS |
| ATGCCACTGGAAGATATCAC+GGG | 0.545959 | 2.4:-49374175 | MS.gene22545:CDS |
| CTGTAAAACTTCCATTATCC+CGG | 0.546253 | 2.4:+49374249 | None:intergenic |
| ATTACTGAAGTTCATGTGGC+AGG | 0.548786 | 2.4:-49373111 | MS.gene22545:CDS |
| TGAGGCAAATGATGGTTGTA+AGG | 0.551776 | 2.4:-49375067 | MS.gene22545:CDS |
| TGAGGCAAATGATGGTTGTA+AGG | 0.551776 | 2.4:-49375166 | MS.gene22545:CDS |
| GAAAGTGGTAAGAAGAGTAG+TGG | 0.551882 | 2.4:-49376620 | MS.gene22545:CDS |
| GGCAGAAAATGCGGTTTGCT+AGG | 0.552629 | 2.4:-49373390 | MS.gene22545:CDS |
| TGCATCTAAATCGATTGCTC+CGG | 0.552829 | 2.4:-49372956 | MS.gene22545:CDS |
| GTCGTCGTTGTTACGTAACT+CGG | 0.553278 | 2.4:+49373227 | None:intergenic |
| GGTGACTCGTCCGGCTAAGG+TGG | 0.554227 | 2.4:-49376231 | MS.gene22545:CDS |
| GCTTGAGGAGGAGAAGAGCT+CGG | 0.554372 | 2.4:-49376012 | MS.gene22545:CDS |
| GATGGAGGACGCAAATAAAG+AGG | 0.558631 | 2.4:-49373172 | MS.gene22545:CDS |
| ATGGAAGCAGCAGCATGAGG+CGG | 0.558667 | 2.4:-49375800 | MS.gene22545:CDS |
| CTGAGAAATTATGAGCCAGT+TGG | 0.560904 | 2.4:-49373324 | MS.gene22545:CDS |
| CAGCAGCCCCTTCCATGCCG+AGG | 0.562328 | 2.4:+49373640 | None:intergenic |
| CGTTGAGTCTCAAGATGTGA+GGG | 0.562424 | 2.4:-49374581 | MS.gene22545:CDS |
| TCTCCACCAAAAGATTGTAC+CGG | 0.562872 | 2.4:-49374472 | MS.gene22545:CDS |
| CAACGAGATGCTCCTTCTGA+AGG | 0.563860 | 2.4:+49374599 | None:intergenic |
| TTTGCGCAAAAGGACTTGAA+AGG | 0.564516 | 2.4:-49373909 | MS.gene22545:CDS |
| GTGTATTGGAAGAGGAGGGA+CGG | 0.565756 | 2.4:-49376260 | MS.gene22545:CDS |
| CATAATTTCTCAGAGGATCA+CGG | 0.567774 | 2.4:+49373334 | None:intergenic |
| AGCAGCCCCTTCCATGCCGA+GGG | 0.568036 | 2.4:+49373641 | None:intergenic |
| ACTCTTTCGACTTTATCTGT+GGG | 0.568556 | 2.4:-49373452 | MS.gene22545:CDS |
| GATACACGATTCTCTTGATG+AGG | 0.568964 | 2.4:-49375085 | MS.gene22545:CDS |
| CTCGAGCCAATCAAACCAGA+TGG | 0.570830 | 2.4:-49375582 | MS.gene22545:CDS |
| TGTGAGGATGAAGCTGATGA+TGG | 0.571431 | 2.4:-49374694 | MS.gene22545:CDS |
| AGGTTATCGGGAAAGGCTAA+GGG | 0.571817 | 2.4:-49375969 | MS.gene22545:CDS |
| GCTAGTGCAGACTTAGACGA+TGG | 0.571929 | 2.4:+49375699 | None:intergenic |
| ATGTCAGCTCTGCAAGGCAA+AGG | 0.573262 | 2.4:-49373681 | MS.gene22545:CDS |
| AAGAAAAGGGCCCAACCCCT+CGG | 0.573547 | 2.4:+49374393 | None:intergenic |
| TGTTTCCCCAAATCAAGCTC+CGG | 0.574726 | 2.4:+49376077 | None:intergenic |
| TCGGTTTATGGAAGTAGGAG+TGG | 0.575273 | 2.4:-49376164 | MS.gene22545:CDS |
| AAAACTCTCAATGCAGGCAA+AGG | 0.577233 | 2.4:-49374203 | MS.gene22545:CDS |
| AAACTCTGAGCCTGTGTGGT+TGG | 0.577806 | 2.4:+49373836 | None:intergenic |
| AGATTCATCCTCTTTGTAAG+CGG | 0.579266 | 2.4:+49375122 | None:intergenic |
| CTTCTAATGGCTCTGAGCAG+TGG | 0.579741 | 2.4:-49374663 | MS.gene22545:CDS |
| AGACAATACAACAAGTAGCA+TGG | 0.580507 | 2.4:-49374150 | MS.gene22545:CDS |
| CTCGGATTCTGAAAACGAGC+CGG | 0.580766 | 2.4:-49374800 | MS.gene22545:CDS |
| TATTAACGGCTCCCTCGGCA+TGG | 0.583903 | 2.4:-49373652 | MS.gene22545:CDS |
| TTTCGGTGTATTGGAAGAGG+AGG | 0.584811 | 2.4:-49376265 | MS.gene22545:CDS |
| AATGCCACTGGAAGATATCA+CGG | 0.585124 | 2.4:-49374176 | MS.gene22545:CDS |
| TTCGGTGTATTGGAAGAGGA+GGG | 0.585819 | 2.4:-49376264 | MS.gene22545:CDS |
| ACTTCAGTAATCTTGAACTG+AGG | 0.588259 | 2.4:+49373123 | None:intergenic |
| GTATTGGAAGAGGAGGGACG+GGG | 0.588897 | 2.4:-49376258 | MS.gene22545:CDS |
| TCTCTTAAGACAGTTTGAGA+AGG | 0.590467 | 2.4:-49374761 | MS.gene22545:CDS |
| AGTAGAGGAGTCATTCTCAA+AGG | 0.591086 | 2.4:-49375286 | MS.gene22545:CDS |
| GTGCGCCGGAGCTTGATTTG+GGG | 0.592524 | 2.4:-49376082 | MS.gene22545:CDS |
| CAAGATTACTGAAGTTCATG+TGG | 0.593112 | 2.4:-49373115 | MS.gene22545:CDS |
| TTGCTGGACTTCAGTCCAGA+TGG | 0.596304 | 2.4:+49373879 | None:intergenic |
| GGCTAAGGTGGTTCAGTGTG+TGG | 0.597990 | 2.4:-49376219 | MS.gene22545:CDS |
| AATCGAAGCACTTTCAATGG+AGG | 0.598982 | 2.4:-49373775 | MS.gene22545:CDS |
| GTTTCCTGATCCGAAACCGA+GGG | 0.600020 | 2.4:-49376465 | MS.gene22545:CDS |
| AATTGAACCTGTTAAAGTAG+AGG | 0.600835 | 2.4:-49375301 | MS.gene22545:CDS |
| AGGGATTGAGAATACAATCT+GGG | 0.601300 | 2.4:-49373755 | MS.gene22545:CDS |
| GCAGTGATGTTGGTGTTGAT+GGG | 0.605197 | 2.4:-49373590 | MS.gene22545:CDS |
| TCGTTGAGTCTCAAGATGTG+AGG | 0.609176 | 2.4:-49374582 | MS.gene22545:CDS |
| CAACGACGACAAGGATGATG+AGG | 0.609371 | 2.4:-49373214 | MS.gene22545:CDS |
| AATTCGAGGTCTAAAACTGG+TGG | 0.609457 | 2.4:-49376497 | MS.gene22545:CDS |
| GTTACGTAACAACGACGACA+AGG | 0.611328 | 2.4:-49373223 | MS.gene22545:CDS |
| TGTTTCCTGATCCGAAACCG+AGG | 0.613767 | 2.4:-49376466 | MS.gene22545:CDS |
| TATCGTTAACTCTTGATGAG+TGG | 0.614675 | 2.4:-49373557 | MS.gene22545:CDS |
| ACTTGGATAGAAGTGCTTCG+AGG | 0.614815 | 2.4:-49376538 | MS.gene22545:CDS |
| GTAAAAGACAGCAGTGATGT+TGG | 0.616788 | 2.4:-49373600 | MS.gene22545:CDS |
| AGTCGAAAGAGTTAGCATGA+TGG | 0.618219 | 2.4:+49373463 | None:intergenic |
| ATATGCGAAAGCGCCTTCAA+CGG | 0.618787 | 2.4:+49376371 | None:intergenic |
| AATTCGGTGGCCAACCACAC+AGG | 0.620829 | 2.4:-49373846 | MS.gene22545:CDS |
| TGAAGAAATGCTCCACAAAG+TGG | 0.621625 | 2.4:+49372909 | None:intergenic |
| TCGGTACTCGTCTCAAGCTG+CGG | 0.623823 | 2.4:-49375751 | MS.gene22545:CDS |
| GATTGCTCCGGTTACCACAA+AGG | 0.623858 | 2.4:-49372944 | MS.gene22545:CDS |
| TCAAGCTCCTCCAAAGTGAG+AGG | 0.624558 | 2.4:+49376029 | None:intergenic |
| GAGCAGTGGAATTTCTCTGA+GGG | 0.624989 | 2.4:-49374649 | MS.gene22545:CDS |
| ACTCATCAAGAGTTAACGAT+AGG | 0.625250 | 2.4:+49373559 | None:intergenic |
| TCAAGAATACCAAAGCTAGT+GGG | 0.626934 | 2.4:-49374324 | MS.gene22545:CDS |
| AAAGGCTCCGGCAGAAAATG+CGG | 0.629934 | 2.4:-49373399 | MS.gene22545:CDS |
| CTTGTTCCAAGACCTTCAGA+AGG | 0.630450 | 2.4:-49374611 | MS.gene22545:CDS |
| CGAAATAGTAGCAAAGATGG+AGG | 0.635235 | 2.4:-49373187 | MS.gene22545:CDS |
| TTGATGGAAGCAGCAGCATG+AGG | 0.635239 | 2.4:-49375803 | MS.gene22545:CDS |
| GAGAAGGAAGCCCTAGATGG+GGG | 0.637335 | 2.4:-49374745 | MS.gene22545:CDS |
| TTGAGGAGGAGAAGAGCTCG+GGG | 0.637637 | 2.4:-49376010 | MS.gene22545:CDS |
| CTAGAAACAGATAAGCCAGA+TGG | 0.638143 | 2.4:-49375414 | MS.gene22545:CDS |
| CTGCCTTAGAAGGAACAGAA+AGG | 0.639055 | 2.4:-49374117 | MS.gene22545:intron |
| GGGGAAATGTCAGCTCTGCA+AGG | 0.640331 | 2.4:-49373687 | MS.gene22545:CDS |
| CCCAAAACTGACATTCATCA+CGG | 0.640525 | 2.4:+49375944 | None:intergenic |
| AAGTGGTAAGAAGAGTAGTG+GGG | 0.642087 | 2.4:-49376618 | MS.gene22545:CDS |
| AATACAATCTGGGATGTCTG+AGG | 0.643484 | 2.4:-49373745 | MS.gene22545:CDS |
| CGTTGCCTCCTCTTGCCGAG+GGG | 0.645194 | 2.4:-49374408 | MS.gene22545:CDS |
| ACTTGTATAAGAGCAAGCAT+TGG | 0.646489 | 2.4:+49373297 | None:intergenic |
| GTTTACAAAACTATAGCAGT+CGG | 0.647515 | 2.4:-49375770 | MS.gene22545:CDS |
| AAGGGAGGAGTTAGGAGACG+AGG | 0.649176 | 2.4:-49373423 | MS.gene22545:CDS |
| ACCAGATTGTTGCTGCGTCG+AGG | 0.650752 | 2.4:+49373050 | None:intergenic |
| ACAATCTGGGATGTCTGAGG+AGG | 0.651243 | 2.4:-49373742 | MS.gene22545:CDS |
| CTGGACTTCAGTCCAGATGG+TGG | 0.651983 | 2.4:+49373882 | None:intergenic |
| TGAGAAGGAAGCCCTAGATG+GGG | 0.654341 | 2.4:-49374746 | MS.gene22545:CDS |
| TGATAATGATGGTTTGCAGA+AGG | 0.655884 | 2.4:-49376420 | MS.gene22545:CDS |
| TCAATGGGGTTTGAACGAGA+AGG | 0.657711 | 2.4:-49374506 | MS.gene22545:CDS |
| GAAGTGCATGCAGTTAACGA+TGG | 0.662303 | 2.4:-49375489 | MS.gene22545:CDS |
| TCATACTTCGCAGAATGGTG+AGG | 0.666619 | 2.4:+49376140 | None:intergenic |
| CATTGTTGCACAATCCATTG+GGG | 0.667500 | 2.4:-49373706 | MS.gene22545:CDS |
| TCGGCAAGAGGAGGCAACGT+AGG | 0.669852 | 2.4:+49374412 | None:intergenic |
| TGAGCAGTGGAATTTCTCTG+AGG | 0.670368 | 2.4:-49374650 | MS.gene22545:CDS |
| AGATGAATCCGCTTACAAAG+AGG | 0.671074 | 2.4:-49375130 | MS.gene22545:CDS |
| ATGTTGTCGAGAATGGAAAG+TGG | 0.673556 | 2.4:-49376635 | MS.gene22545:CDS |
| GGTTGCTTGCTAATGGAATG+GGG | 0.673772 | 2.4:-49373020 | MS.gene22545:CDS |
| AAGATGTGAGGGGAAAACAA+AGG | 0.674875 | 2.4:-49374570 | MS.gene22545:CDS |
| AGCAACAATCTGGTTCACGC+TGG | 0.677921 | 2.4:-49373041 | MS.gene22545:CDS |
| AACGTAGGAAGCTCTTCAGG+TGG | 0.681799 | 2.4:+49374427 | None:intergenic |
| TTCCCCGTGATATCTTCCAG+TGG | 0.684916 | 2.4:+49374172 | None:intergenic |
| TTTCTGCAGGTACAACAACA+GGG | 0.685625 | 2.4:+49374278 | None:intergenic |
| ATCTGTGGGAGTTCAAAGGG+AGG | 0.685909 | 2.4:-49373438 | MS.gene22545:CDS |
| TGTCTCAGATTTCGAGACAG+CGG | 0.692288 | 2.4:-49374956 | MS.gene22545:CDS |
| TTTCTTCAGACAAAAGACGG+AGG | 0.693029 | 2.4:-49374376 | MS.gene22545:CDS |
| ACTGGCTCATAATTTCTCAG+AGG | 0.701368 | 2.4:+49373327 | None:intergenic |
| TTTCCTGATCCGAAACCGAG+GGG | 0.702358 | 2.4:-49376464 | MS.gene22545:CDS |
| TGGTTGTAAGGATCAGTCAG+TGG | 0.703670 | 2.4:-49375055 | MS.gene22545:CDS |
| TGGTTGTAAGGATCAGTCAG+TGG | 0.703670 | 2.4:-49375154 | MS.gene22545:CDS |
| AACATCGAGTTGATCTTACG+AGG | 0.703864 | 2.4:-49376058 | MS.gene22545:CDS |
| GTTGAGTCTCAAGATGTGAG+GGG | 0.712630 | 2.4:-49374580 | MS.gene22545:CDS |
| AAACAAACTCTGAGCCTGTG+TGG | 0.720121 | 2.4:+49373832 | None:intergenic |
| GAAGCCTTAATGCGTCAATG+GGG | 0.725101 | 2.4:-49374520 | MS.gene22545:CDS |
| AGATGAATCTGCTTACAGAG+AGG | 0.725793 | 2.4:-49375031 | MS.gene22545:CDS |
| TGCCACTGGAAGATATCACG+GGG | 0.738197 | 2.4:-49374174 | MS.gene22545:CDS |
| AGAGGTAAAGGATCTTCACG+AGG | 0.753018 | 2.4:-49375727 | MS.gene22545:CDS |
| TGTTGGTGATAACACCAGCG+CGG | 0.808616 | 2.4:-49375913 | MS.gene22545:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAGGTTAATTTATATATA+AGG | - | chr2.4:49375383-49375402 | MS.gene22545:CDS | 15.0% |
| !!! | ATTTTTCTTTGCTTTTTTTT+AGG | - | chr2.4:49375471-49375490 | MS.gene22545:CDS | 15.0% |
| !! | CAAAAAATTCATTATCTTGA+CGG | + | chr2.4:49374099-49374118 | None:intergenic | 20.0% |
| !! | TAGTCAAAAGAAATTGTTAA+AGG | - | chr2.4:49372860-49372879 | MS.gene22545:CDS | 20.0% |
| !!! | AATAGTAATGATGATAATGA+TGG | - | chr2.4:49373017-49373036 | MS.gene22545:CDS | 20.0% |
| !!! | CTACAAAATATTTTTTGCTT+CGG | + | chr2.4:49376196-49376215 | None:intergenic | 20.0% |
| !!! | CTCTTTATTTGATTTTGTTA+TGG | - | chr2.4:49374729-49374748 | MS.gene22545:CDS | 20.0% |
| !!! | GAATTTTTTGTTGTTGATAA+GGG | - | chr2.4:49374109-49374128 | MS.gene22545:intron | 20.0% |
| !!! | TAAGTTTTTTAACCAAACAT+GGG | - | chr2.4:49375428-49375447 | MS.gene22545:CDS | 20.0% |
| !!! | TACAATTAAACCTCTTATTT+CGG | + | chr2.4:49373103-49373122 | None:intergenic | 20.0% |
| !!! | TGAATTTTTTGTTGTTGATA+AGG | - | chr2.4:49374108-49374127 | MS.gene22545:intron | 20.0% |
| !!! | TTAAGTTTTTTAACCAAACA+TGG | - | chr2.4:49375427-49375446 | MS.gene22545:CDS | 20.0% |
| ! | ATAAAAGGTCTATATGGAAT+TGG | - | chr2.4:49373051-49373070 | MS.gene22545:CDS | 25.0% |
| ! | CAGCAATTTCAATTCAAATT+CGG | - | chr2.4:49375586-49375605 | MS.gene22545:CDS | 25.0% |
| ! | CATTTGGTATAATGACATTA+GGG | + | chr2.4:49376618-49376637 | None:intergenic | 25.0% |
| ! | TAAGAAATTCGATGAAGAAA+AGG | - | chr2.4:49373793-49373812 | MS.gene22545:CDS | 25.0% |
| ! | TATGAATAAAGCTATGTACT+TGG | - | chr2.4:49372893-49372912 | MS.gene22545:CDS | 25.0% |
| ! | TCATTTGGTATAATGACATT+AGG | + | chr2.4:49376619-49376638 | None:intergenic | 25.0% |
| ! | TTCATGTACATTTGATTGAA+GGG | - | chr2.4:49373132-49373151 | MS.gene22545:CDS | 25.0% |
| ! | TTGGTATTCTTGAAAATTGA+GGG | + | chr2.4:49375117-49375136 | None:intergenic | 25.0% |
| ! | TTTGGTATTCTTGAAAATTG+AGG | + | chr2.4:49375118-49375137 | None:intergenic | 25.0% |
| !! | AGATTTTCTTTTGACAAATC+AGG | + | chr2.4:49373848-49373867 | None:intergenic | 25.0% |
| !!! | GTTTTGTATCATTGATTTTG+AGG | - | chr2.4:49375366-49375385 | MS.gene22545:CDS | 25.0% |
| AATTGAAAAACTCTCAATGC+AGG | - | chr2.4:49375239-49375258 | MS.gene22545:CDS | 30.0% | |
| AATTGAACCTGTTAAAGTAG+AGG | - | chr2.4:49374147-49374166 | MS.gene22545:CDS | 30.0% | |
| ACATTAGGGTTTCTTATATG+TGG | + | chr2.4:49376604-49376623 | None:intergenic | 30.0% | |
| ACTTATACTTGTTCGGTTTA+TGG | - | chr2.4:49373272-49373291 | MS.gene22545:CDS | 30.0% | |
| AGAAGGATAAAAGGTCTATA+TGG | - | chr2.4:49373045-49373064 | MS.gene22545:CDS | 30.0% | |
| ATATGTGGATTTAGTGTTTC+CGG | + | chr2.4:49376589-49376608 | None:intergenic | 30.0% | |
| CAATTTCAATTCAAATTCGG+TGG | - | chr2.4:49375589-49375608 | MS.gene22545:CDS | 30.0% | |
| CGAATTTGAATTGAAATTGC+TGG | + | chr2.4:49375588-49375607 | None:intergenic | 30.0% | |
| CTTCATGTACATTTGATTGA+AGG | - | chr2.4:49373131-49373150 | MS.gene22545:CDS | 30.0% | |
| GATTTGAATTCTGCAACTTT+AGG | + | chr2.4:49374529-49374548 | None:intergenic | 30.0% | |
| GTTAAACAAAGACAGTTTGA+TGG | - | chr2.4:49373629-49373648 | MS.gene22545:CDS | 30.0% | |
| GTTTACAAAACTATAGCAGT+CGG | - | chr2.4:49373678-49373697 | MS.gene22545:CDS | 30.0% | |
| TTGCAGCATGATTCAATAAT+AGG | - | chr2.4:49375503-49375522 | MS.gene22545:CDS | 30.0% | |
| ! | AACTGTCTTTGTTTAACATC+TGG | + | chr2.4:49373626-49373645 | None:intergenic | 30.0% |
| ! | AATGGAAGTTTTACAGTGTT+TGG | - | chr2.4:49375206-49375225 | MS.gene22545:CDS | 30.0% |
| ! | CTAAGTCTATTAGTGTCATT+TGG | + | chr2.4:49376634-49376653 | None:intergenic | 30.0% |
| ! | CTTTTCCAGAATCAAGTAAA+AGG | + | chr2.4:49374063-49374082 | None:intergenic | 30.0% |
| ! | GAAGTTGACTTATACTTGTT+CGG | - | chr2.4:49373265-49373284 | MS.gene22545:CDS | 30.0% |
| !! | CTTTGATGATGTTACAGAAT+CGG | - | chr2.4:49374576-49374595 | MS.gene22545:CDS | 30.0% |
| !! | TTTTGATGGTTCGAGTTTTT+CGG | - | chr2.4:49373166-49373185 | MS.gene22545:CDS | 30.0% |
| !!! | GCTATAGTTTTGTAAACTTC+CGG | + | chr2.4:49373675-49373694 | None:intergenic | 30.0% |
| AAAGTGGTAAGAAGAGTAGT+GGG | - | chr2.4:49372829-49372848 | MS.gene22545:CDS | 35.0% | |
| AACATTGTTGCACAATCCAT+TGG | - | chr2.4:49375740-49375759 | MS.gene22545:CDS | 35.0% | |
| AACTCTTTCGACTTTATCTG+TGG | - | chr2.4:49375995-49376014 | MS.gene22545:CDS | 35.0% | |
| AATGACTCCTCTACTTTAAC+AGG | + | chr2.4:49374157-49374176 | None:intergenic | 35.0% | |
| ACATTGTTGCACAATCCATT+GGG | - | chr2.4:49375741-49375760 | MS.gene22545:CDS | 35.0% | |
| ACTCATCAAGAGTTAACGAT+AGG | + | chr2.4:49375892-49375911 | None:intergenic | 35.0% | |
| ACTCTTTCGACTTTATCTGT+GGG | - | chr2.4:49375996-49376015 | MS.gene22545:CDS | 35.0% | |
| ACTTCAGTAATCTTGAACTG+AGG | + | chr2.4:49376328-49376347 | None:intergenic | 35.0% | |
| ACTTGTATAAGAGCAAGCAT+TGG | + | chr2.4:49376154-49376173 | None:intergenic | 35.0% | |
| AGACAATACAACAAGTAGCA+TGG | - | chr2.4:49375298-49375317 | MS.gene22545:CDS | 35.0% | |
| AGATTCATCCTCTTTGTAAG+CGG | + | chr2.4:49374329-49374348 | None:intergenic | 35.0% | |
| AGCATTTCTTCACGCATATT+TGG | - | chr2.4:49376550-49376569 | MS.gene22545:CDS | 35.0% | |
| AGGGATTGAGAATACAATCT+GGG | - | chr2.4:49375693-49375712 | MS.gene22545:CDS | 35.0% | |
| ATTTGGAAAAGCGAAAGAAC+CGG | - | chr2.4:49376567-49376586 | MS.gene22545:CDS | 35.0% | |
| CAAGATTACTGAAGTTCATG+TGG | - | chr2.4:49376333-49376352 | MS.gene22545:CDS | 35.0% | |
| CAATTTCACAGTAGCGTTAA+TGG | - | chr2.4:49376084-49376103 | MS.gene22545:CDS | 35.0% | |
| CATAATTTCTCAGAGGATCA+CGG | + | chr2.4:49376117-49376136 | None:intergenic | 35.0% | |
| CTGTAAAACTTCCATTATCC+CGG | + | chr2.4:49375202-49375221 | None:intergenic | 35.0% | |
| GACAATACAACAAGTAGCAT+GGG | - | chr2.4:49375299-49375318 | MS.gene22545:CDS | 35.0% | |
| GATACACAATTCTCTTGATG+AGG | - | chr2.4:49374264-49374283 | MS.gene22545:CDS | 35.0% | |
| GATTGTGCAACAATGTTAGA+TGG | + | chr2.4:49375737-49375756 | None:intergenic | 35.0% | |
| TAACCTTTCTGTTCCTTCTA+AGG | + | chr2.4:49375337-49375356 | None:intergenic | 35.0% | |
| TACAAAGAGGATGAATCTTC+TGG | - | chr2.4:49374331-49374350 | MS.gene22545:CDS | 35.0% | |
| TATCGTTAACTCTTGATGAG+TGG | - | chr2.4:49375891-49375910 | MS.gene22545:CDS | 35.0% | |
| TCAAGAATACCAAAGCTAGT+GGG | - | chr2.4:49375124-49375143 | MS.gene22545:CDS | 35.0% | |
| TCATGAAATGCATCAAGTTC+AGG | + | chr2.4:49374010-49374029 | None:intergenic | 35.0% | |
| TCTCTTAAGACAGTTTGAGA+AGG | - | chr2.4:49374687-49374706 | MS.gene22545:CDS | 35.0% | |
| TCTTCAGGTGGTAATTGAAT+TGG | + | chr2.4:49375012-49375031 | None:intergenic | 35.0% | |
| TTCAAGAATACCAAAGCTAG+TGG | - | chr2.4:49375123-49375142 | MS.gene22545:CDS | 35.0% | |
| TTTATCTGTGGGAGTTCAAA+GGG | - | chr2.4:49376007-49376026 | MS.gene22545:CDS | 35.0% | |
| TTTCGCATATCCGAAATAAG+AGG | - | chr2.4:49373090-49373109 | MS.gene22545:CDS | 35.0% | |
| ! | ACTTTTACCTATGATACTGC+AGG | - | chr2.4:49374214-49374233 | MS.gene22545:CDS | 35.0% |
| ! | AGATACAACTTTTGCGCAAA+AGG | - | chr2.4:49375529-49375548 | MS.gene22545:CDS | 35.0% |
| ! | ATGGTTTGCAGAAGGATAAA+AGG | - | chr2.4:49373036-49373055 | MS.gene22545:CDS | 35.0% |
| ! | CAAAATCGAAGCACTTTCAA+TGG | - | chr2.4:49375670-49375689 | MS.gene22545:CDS | 35.0% |
| ! | CCTTTTCTTCAGACAAAAGA+CGG | - | chr2.4:49375069-49375088 | MS.gene22545:CDS | 35.0% |
| ! | CGTCTTTTGTCTGAAGAAAA+GGG | + | chr2.4:49375071-49375090 | None:intergenic | 35.0% |
| ! | CGTTTCTTTTCTGATATCAG+AGG | + | chr2.4:49373900-49373919 | None:intergenic | 35.0% |
| ! | GTATATCCATCTGGTTTGAT+TGG | + | chr2.4:49373875-49373894 | None:intergenic | 35.0% |
| ! | TCGATTTTGTTCATAGCCAA+CGG | + | chr2.4:49375659-49375678 | None:intergenic | 35.0% |
| ! | TGATAATGATGGTTTGCAGA+AGG | - | chr2.4:49373028-49373047 | MS.gene22545:CDS | 35.0% |
| ! | TTTTAAGCCTGCAGTATCAT+AGG | + | chr2.4:49374224-49374243 | None:intergenic | 35.0% |
| !! | ACTACAAGTTTCAGGTTATC+GGG | - | chr2.4:49373467-49373486 | MS.gene22545:CDS | 35.0% |
| !! | GACTACAAGTTTCAGGTTAT+CGG | - | chr2.4:49373466-49373485 | MS.gene22545:CDS | 35.0% |
| !! | GGCAAAGGCATTGATATTAA+CGG | - | chr2.4:49375782-49375801 | MS.gene22545:CDS | 35.0% |
| !! | TCAACACATTAGGAGCATTA+TGG | + | chr2.4:49373571-49373590 | None:intergenic | 35.0% |
| !! | TGATTTTGTTATGGACTGTG+AGG | - | chr2.4:49374738-49374757 | MS.gene22545:CDS | 35.0% |
| !!! | GAATGTCAGTTTTGGGTATA+CGG | - | chr2.4:49373511-49373530 | MS.gene22545:CDS | 35.0% |
| AAAACTCTCAATGCAGGCAA+AGG | - | chr2.4:49375245-49375264 | MS.gene22545:CDS | 40.0% | |
| AAGATGTGAGGGGAAAACAA+AGG | - | chr2.4:49374878-49374897 | MS.gene22545:CDS | 40.0% | |
| AAGTGGTAAGAAGAGTAGTG+GGG | - | chr2.4:49372830-49372849 | MS.gene22545:CDS | 40.0% | |
| AATGCCACTGGAAGATATCA+CGG | - | chr2.4:49375272-49375291 | MS.gene22545:CDS | 40.0% | |
| AATTGAAGATCTTGCACCGT+TGG | - | chr2.4:49375640-49375659 | MS.gene22545:CDS | 40.0% | |
| AGAAGCCTTAATGCGTCAAT+GGG | - | chr2.4:49374927-49374946 | MS.gene22545:CDS | 40.0% | |
| AGATGAATCCGCTTACAAAG+AGG | - | chr2.4:49374318-49374337 | MS.gene22545:CDS | 40.0% | |
| AGATGAATCTGCTTACAGAG+AGG | - | chr2.4:49374417-49374436 | MS.gene22545:CDS | 40.0% | |
| AGATGTGAGGGGAAAACAAA+GGG | - | chr2.4:49374879-49374898 | MS.gene22545:CDS | 40.0% | |
| AGCCTCAGAAAAAGAAGCTT+TGG | - | chr2.4:49376371-49376390 | MS.gene22545:CDS | 40.0% | |
| AGTAGAGGAGTCATTCTCAA+AGG | - | chr2.4:49374162-49374181 | MS.gene22545:CDS | 40.0% | |
| AGTCGAAAGAGTTAGCATGA+TGG | + | chr2.4:49375988-49376007 | None:intergenic | 40.0% | |
| ATATAAGACGCCTATTGAGC+TGG | + | chr2.4:49373774-49373793 | None:intergenic | 40.0% | |
| ATATCAGATGCATGCACTTC+AGG | + | chr2.4:49373923-49373942 | None:intergenic | 40.0% | |
| ATGTTGTCGAGAATGGAAAG+TGG | - | chr2.4:49372813-49372832 | MS.gene22545:CDS | 40.0% | |
| ATTACTGAAGTTCATGTGGC+AGG | - | chr2.4:49376337-49376356 | MS.gene22545:CDS | 40.0% | |
| ATTGATATTAACGGCTCCCT+CGG | - | chr2.4:49375791-49375810 | MS.gene22545:CDS | 40.0% | |
| ATTTCTGCAGGTACAACAAC+AGG | + | chr2.4:49375174-49375193 | None:intergenic | 40.0% | |
| CATTATCTTGACGGTCTTCA+GGG | + | chr2.4:49374090-49374109 | None:intergenic | 40.0% | |
| CATTGTTGCACAATCCATTG+GGG | - | chr2.4:49375742-49375761 | MS.gene22545:CDS | 40.0% | |
| CCCAAAACTGACATTCATCA+CGG | + | chr2.4:49373507-49373526 | None:intergenic | 40.0% | |
| CCTCAGAAAAAGAAGCTTTG+GGG | - | chr2.4:49376373-49376392 | MS.gene22545:CDS | 40.0% | |
| CGAAATAGTAGCAAAGATGG+AGG | - | chr2.4:49376261-49376280 | MS.gene22545:CDS | 40.0% | |
| CTAGAAACAGATAAGCCAGA+TGG | - | chr2.4:49374034-49374053 | MS.gene22545:intron | 40.0% | |
| CTCGAACCATCAAAAGTAGA+AGG | + | chr2.4:49373161-49373180 | None:intergenic | 40.0% | |
| CTGAGAAATTATGAGCCAGT+TGG | - | chr2.4:49376124-49376143 | MS.gene22545:CDS | 40.0% | |
| CTTGTTCGGTTTATGGAAGT+AGG | - | chr2.4:49373279-49373298 | MS.gene22545:CDS | 40.0% | |
| CTTTATCTGTGGGAGTTCAA+AGG | - | chr2.4:49376006-49376025 | MS.gene22545:CDS | 40.0% | |
| GAAACATGTAAGCCCATGTT+TGG | + | chr2.4:49375443-49375462 | None:intergenic | 40.0% | |
| GAAAGTGGTAAGAAGAGTAG+TGG | - | chr2.4:49372828-49372847 | MS.gene22545:CDS | 40.0% | |
| GAGCGAAATAGTAGCAAAGA+TGG | - | chr2.4:49376258-49376277 | MS.gene22545:CDS | 40.0% | |
| GAGGGATTGAGAATACAATC+TGG | - | chr2.4:49375692-49375711 | MS.gene22545:CDS | 40.0% | |
| GATACACGATTCTCTTGATG+AGG | - | chr2.4:49374363-49374382 | MS.gene22545:CDS | 40.0% | |
| GATGGCTATGATGCTTCTAA+TGG | - | chr2.4:49374772-49374791 | MS.gene22545:CDS | 40.0% | |
| GCCTCAGAAAAAGAAGCTTT+GGG | - | chr2.4:49376372-49376391 | MS.gene22545:CDS | 40.0% | |
| GGCTCAAATGCTAGAAGATT+TGG | - | chr2.4:49374900-49374919 | MS.gene22545:CDS | 40.0% | |
| GTAAAAGACAGCAGTGATGT+TGG | - | chr2.4:49375848-49375867 | MS.gene22545:CDS | 40.0% | |
| GTCGAAAGAGTTAGCATGAT+GGG | + | chr2.4:49375987-49376006 | None:intergenic | 40.0% | |
| GTTGTTGTACCTGCAGAAAT+GGG | - | chr2.4:49375174-49375193 | MS.gene22545:CDS | 40.0% | |
| TAGTGGGAGTTTAATCATGC+AGG | - | chr2.4:49375140-49375159 | MS.gene22545:CDS | 40.0% | |
| TCATTATCTTGACGGTCTTC+AGG | + | chr2.4:49374091-49374110 | None:intergenic | 40.0% | |
| TCTCCACCAAAAGATTGTAC+CGG | - | chr2.4:49374976-49374995 | MS.gene22545:CDS | 40.0% | |
| TCTCTTGATGAGGCAAATGA+TGG | - | chr2.4:49374274-49374293 | MS.gene22545:CDS | 40.0% | |
| TGAAGAAATGCTCCACAAAG+TGG | + | chr2.4:49376542-49376561 | None:intergenic | 40.0% | |
| TGAGGCAAATGATGGTTGTA+AGG | - | chr2.4:49374282-49374301 | MS.gene22545:CDS | 40.0% | |
| TGCATCTAAATCGATTGCTC+CGG | - | chr2.4:49376492-49376511 | MS.gene22545:CDS | 40.0% | |
| TGTCTTAAGAGAAGCTCTCT+CGG | + | chr2.4:49374679-49374698 | None:intergenic | 40.0% | |
| TGTTGTTGTACCTGCAGAAA+TGG | - | chr2.4:49375173-49375192 | MS.gene22545:CDS | 40.0% | |
| TTGAATTGGACTTCCGAAAC+CGG | + | chr2.4:49374998-49375017 | None:intergenic | 40.0% | |
| TTGCTTCATACTTCGCAGAA+TGG | + | chr2.4:49373316-49373335 | None:intergenic | 40.0% | |
| TTTCTGCAGGTACAACAACA+GGG | + | chr2.4:49375173-49375192 | None:intergenic | 40.0% | |
| TTTCTTCAGACAAAAGACGG+AGG | - | chr2.4:49375072-49375091 | MS.gene22545:CDS | 40.0% | |
| TTTGCGCAAAAGGACTTGAA+AGG | - | chr2.4:49375539-49375558 | MS.gene22545:CDS | 40.0% | |
| ! | AAACCGGTACAATCTTTTGG+TGG | + | chr2.4:49374982-49375001 | None:intergenic | 40.0% |
| ! | AATACAATCTGGGATGTCTG+AGG | - | chr2.4:49375703-49375722 | MS.gene22545:CDS | 40.0% |
| ! | AATCGAAGCACTTTCAATGG+AGG | - | chr2.4:49375673-49375692 | MS.gene22545:CDS | 40.0% |
| ! | AATTCGAGGTCTAAAACTGG+TGG | - | chr2.4:49372951-49372970 | MS.gene22545:CDS | 40.0% |
| ! | ACTGGCTCATAATTTCTCAG+AGG | + | chr2.4:49376124-49376143 | None:intergenic | 40.0% |
| ! | ATCGAAGCACTTTCAATGGA+GGG | - | chr2.4:49375674-49375693 | MS.gene22545:CDS | 40.0% |
| ! | CATCTGGCTTATCTGTTTCT+AGG | + | chr2.4:49374036-49374055 | None:intergenic | 40.0% |
| ! | CCGTCTTTTGTCTGAAGAAA+AGG | + | chr2.4:49375072-49375091 | None:intergenic | 40.0% |
| ! | CCGTGATGAATGTCAGTTTT+GGG | - | chr2.4:49373504-49373523 | MS.gene22545:CDS | 40.0% |
| ! | GATTAAACTCCCACTAGCTT+TGG | + | chr2.4:49375136-49375155 | None:intergenic | 40.0% |
| ! | TCAGAGGAAGTATATCCATC+TGG | + | chr2.4:49373884-49373903 | None:intergenic | 40.0% |
| ! | TCGAATTCGAGGTCTAAAAC+TGG | - | chr2.4:49372948-49372967 | MS.gene22545:CDS | 40.0% |
| ! | TGGTTGCTTGCTAATGGAAT+GGG | - | chr2.4:49376427-49376446 | MS.gene22545:CDS | 40.0% |
| ! | TTACAGTGTTTGGCTTCAGT+TGG | - | chr2.4:49375216-49375235 | MS.gene22545:CDS | 40.0% |
| !! | AACATCGAGTTGATCTTACG+AGG | - | chr2.4:49373390-49373409 | MS.gene22545:CDS | 40.0% |
| !! | AAGTTTCAGGTTATCGGGAA+AGG | - | chr2.4:49373472-49373491 | MS.gene22545:CDS | 40.0% |
| !! | CCAAAAGATTGTACCGGTTT+CGG | - | chr2.4:49374982-49375001 | MS.gene22545:CDS | 40.0% |
| !! | GCAGGCTTAAAAGTATCTTC+TGG | - | chr2.4:49374232-49374251 | MS.gene22545:CDS | 40.0% |
| !! | GTTCGAGTTTTTCGGTGTAT+TGG | - | chr2.4:49373174-49373193 | MS.gene22545:CDS | 40.0% |
| !! | GTTTTTCGGTGTATTGGAAG+AGG | - | chr2.4:49373180-49373199 | MS.gene22545:CDS | 40.0% |
| !! | TAGAAGTGCTTCGAGGAATT+CGG | - | chr2.4:49372917-49372936 | MS.gene22545:CDS | 40.0% |
| !!! | AGTTTTGGGTATACGGTTGT+TGG | - | chr2.4:49373518-49373537 | MS.gene22545:CDS | 40.0% |
| !!! | GATGCAGCTTTTGACTTCAT+TGG | + | chr2.4:49376478-49376497 | None:intergenic | 40.0% |
| AAACAAACTCTGAGCCTGTG+TGG | + | chr2.4:49375619-49375638 | None:intergenic | 45.0% | |
| AGAGGTAAAGGATCTTCACG+AGG | - | chr2.4:49373721-49373740 | MS.gene22545:CDS | 45.0% | |
| AGGTTATCGGGAAAGGCTAA+GGG | - | chr2.4:49373479-49373498 | MS.gene22545:CDS | 45.0% | |
| ATAAAGAGAAGCCCCCATCT+AGG | + | chr2.4:49374717-49374736 | None:intergenic | 45.0% | |
| ATGCCACTGGAAGATATCAC+GGG | - | chr2.4:49375273-49375292 | MS.gene22545:CDS | 45.0% | |
| ATGGAATTGGAGACCGTTGA+AGG | - | chr2.4:49373064-49373083 | MS.gene22545:CDS | 45.0% | |
| CAAACCCCATTGACGCATTA+AGG | + | chr2.4:49374935-49374954 | None:intergenic | 45.0% | |
| CAGAAGCCTTAATGCGTCAA+TGG | - | chr2.4:49374926-49374945 | MS.gene22545:CDS | 45.0% | |
| CGTTGAGTCTCAAGATGTGA+GGG | - | chr2.4:49374867-49374886 | MS.gene22545:CDS | 45.0% | |
| CTATTGCTTCCTTTACCCCT+CGG | + | chr2.4:49373002-49373021 | None:intergenic | 45.0% | |
| CTGCCTTAGAAGGAACAGAA+AGG | - | chr2.4:49375331-49375350 | MS.gene22545:CDS | 45.0% | |
| CTTGTTCCAAGACCTTCAGA+AGG | - | chr2.4:49374837-49374856 | MS.gene22545:CDS | 45.0% | |
| GAAGCCTTAATGCGTCAATG+GGG | - | chr2.4:49374928-49374947 | MS.gene22545:CDS | 45.0% | |
| GAAGTGCATGCAGTTAACGA+TGG | - | chr2.4:49373959-49373978 | MS.gene22545:intron | 45.0% | |
| GAGCAGTGGAATTTCTCTGA+GGG | - | chr2.4:49374799-49374818 | MS.gene22545:CDS | 45.0% | |
| GATGGAGGACGCAAATAAAG+AGG | - | chr2.4:49376276-49376295 | MS.gene22545:CDS | 45.0% | |
| GTCGTCGTTGTTACGTAACT+CGG | + | chr2.4:49376224-49376243 | None:intergenic | 45.0% | |
| GTTACGTAACAACGACGACA+AGG | - | chr2.4:49376225-49376244 | MS.gene22545:CDS | 45.0% | |
| GTTGAGTCTCAAGATGTGAG+GGG | - | chr2.4:49374868-49374887 | MS.gene22545:CDS | 45.0% | |
| TAAAGAGAAGCCCCCATCTA+GGG | + | chr2.4:49374716-49374735 | None:intergenic | 45.0% | |
| TCAAGTAAAAGGCAGCCATC+TGG | + | chr2.4:49374052-49374071 | None:intergenic | 45.0% | |
| TCAATGGGGTTTGAACGAGA+AGG | - | chr2.4:49374942-49374961 | MS.gene22545:CDS | 45.0% | |
| TCATACTTCGCAGAATGGTG+AGG | + | chr2.4:49373311-49373330 | None:intergenic | 45.0% | |
| TCGGTTTATGGAAGTAGGAG+TGG | - | chr2.4:49373284-49373303 | MS.gene22545:CDS | 45.0% | |
| TCGTTAACTGCATGCACTTC+AGG | + | chr2.4:49373959-49373978 | None:intergenic | 45.0% | |
| TCGTTGAGTCTCAAGATGTG+AGG | - | chr2.4:49374866-49374885 | MS.gene22545:CDS | 45.0% | |
| TCTTGATGAGTGGATGAAGC+TGG | - | chr2.4:49375901-49375920 | MS.gene22545:CDS | 45.0% | |
| TGAGCAGTGGAATTTCTCTG+AGG | - | chr2.4:49374798-49374817 | MS.gene22545:CDS | 45.0% | |
| TGCCTCGAAGTCAACACATT+AGG | + | chr2.4:49373581-49373600 | None:intergenic | 45.0% | |
| TGGTTGTAAGGATCAGTCAG+TGG | - | chr2.4:49374294-49374313 | MS.gene22545:CDS | 45.0% | |
| TGTCTCAGATTTCGAGACAG+CGG | - | chr2.4:49374492-49374511 | MS.gene22545:CDS | 45.0% | |
| TGTGAGGATGAAGCTGATGA+TGG | - | chr2.4:49374754-49374773 | MS.gene22545:CDS | 45.0% | |
| TGTTTCCCCAAATCAAGCTC+CGG | + | chr2.4:49373374-49373393 | None:intergenic | 45.0% | |
| TTGAAAGGAACACCACCATC+TGG | - | chr2.4:49375554-49375573 | MS.gene22545:CDS | 45.0% | |
| TTGAGAAGGAAGCCCTAGAT+GGG | - | chr2.4:49374701-49374720 | MS.gene22545:CDS | 45.0% | |
| TTTGAGAAGGAAGCCCTAGA+TGG | - | chr2.4:49374700-49374719 | MS.gene22545:CDS | 45.0% | |
| ! | AAGAAGAGTAGTGGGGTTTC+TGG | - | chr2.4:49372837-49372856 | MS.gene22545:CDS | 45.0% |
| ! | AGAAATGGGTTCCGGGATAA+TGG | - | chr2.4:49375188-49375207 | MS.gene22545:CDS | 45.0% |
| ! | CCCCAAAGCTTCTTTTTCTG+AGG | + | chr2.4:49376376-49376395 | None:intergenic | 45.0% |
| ! | CCGAAACCGGTACAATCTTT+TGG | + | chr2.4:49374985-49375004 | None:intergenic | 45.0% |
| ! | CTGGTTGCTTGCTAATGGAA+TGG | - | chr2.4:49376426-49376445 | MS.gene22545:CDS | 45.0% |
| ! | CTTCTGAAGGTCTTGGAACA+AGG | + | chr2.4:49374839-49374858 | None:intergenic | 45.0% |
| ! | GCCGTGATGAATGTCAGTTT+TGG | - | chr2.4:49373503-49373522 | MS.gene22545:CDS | 45.0% |
| ! | GGCTGCCTTTTACTTGATTC+TGG | - | chr2.4:49374055-49374074 | MS.gene22545:intron | 45.0% |
| ! | GGTTGCTTGCTAATGGAATG+GGG | - | chr2.4:49376428-49376447 | MS.gene22545:CDS | 45.0% |
| ! | TAGCAAACCGCATTTTCTGC+CGG | + | chr2.4:49376059-49376078 | None:intergenic | 45.0% |
| ! | TTCGGTGTATTGGAAGAGGA+GGG | - | chr2.4:49373184-49373203 | MS.gene22545:CDS | 45.0% |
| ! | TTTCGGTGTATTGGAAGAGG+AGG | - | chr2.4:49373183-49373202 | MS.gene22545:CDS | 45.0% |
| !! | ACTTGGATAGAAGTGCTTCG+AGG | - | chr2.4:49372910-49372929 | MS.gene22545:CDS | 45.0% |
| !! | AGCAGTGATGTTGGTGTTGA+TGG | - | chr2.4:49375857-49375876 | MS.gene22545:CDS | 45.0% |
| !! | ATATGCGAAAGCGCCTTCAA+CGG | + | chr2.4:49373080-49373099 | None:intergenic | 45.0% |
| !! | CTCCTAATGTGTTGACTTCG+AGG | - | chr2.4:49373576-49373595 | MS.gene22545:CDS | 45.0% |
| !! | CTTTCTGTTCCTTCTAAGGC+AGG | + | chr2.4:49375333-49375352 | None:intergenic | 45.0% |
| !! | GCAGTGATGTTGGTGTTGAT+GGG | - | chr2.4:49375858-49375877 | MS.gene22545:CDS | 45.0% |
| !! | GGAAGTGGACTACAAGTTTC+AGG | - | chr2.4:49373459-49373478 | MS.gene22545:CDS | 45.0% |
| !! | GGGTTGCCTTCTACTTTTGA+TGG | - | chr2.4:49373152-49373171 | MS.gene22545:CDS | 45.0% |
| !!! | AGCTTCTTTTTCTGAGGCTC+AGG | + | chr2.4:49376370-49376389 | None:intergenic | 45.0% |
| AAACTCTGAGCCTGTGTGGT+TGG | + | chr2.4:49375615-49375634 | None:intergenic | 50.0% | |
| AAAGGCTCCGGCAGAAAATG+CGG | - | chr2.4:49376049-49376068 | MS.gene22545:CDS | 50.0% | |
| AACGTAGGAAGCTCTTCAGG+TGG | + | chr2.4:49375024-49375043 | None:intergenic | 50.0% | |
| ACACACTGAACCACCTTAGC+CGG | + | chr2.4:49373230-49373249 | None:intergenic | 50.0% | |
| AGTTCAGGTGTGTCAAGCAC+TGG | + | chr2.4:49373995-49374014 | None:intergenic | 50.0% | |
| ATCTGTGGGAGTTCAAAGGG+AGG | - | chr2.4:49376010-49376029 | MS.gene22545:CDS | 50.0% | |
| ATGTCAGCTCTGCAAGGCAA+AGG | - | chr2.4:49375767-49375786 | MS.gene22545:CDS | 50.0% | |
| CAACGACGACAAGGATGATG+AGG | - | chr2.4:49376234-49376253 | MS.gene22545:CDS | 50.0% | |
| CAACGAGATGCTCCTTCTGA+AGG | + | chr2.4:49374852-49374871 | None:intergenic | 50.0% | |
| CAGAGCTGACATTTCCCCAA+TGG | + | chr2.4:49375759-49375778 | None:intergenic | 50.0% | |
| CAGGTTATCGGGAAAGGCTA+AGG | - | chr2.4:49373478-49373497 | MS.gene22545:CDS | 50.0% | |
| CGGAGGCTATCTACGATCTA+TGG | - | chr2.4:49375089-49375108 | MS.gene22545:CDS | 50.0% | |
| CTCGAGCCAATCAAACCAGA+TGG | - | chr2.4:49373866-49373885 | MS.gene22545:CDS | 50.0% | |
| CTTCCTTTACCCCTCGGTTT+CGG | + | chr2.4:49372996-49373015 | None:intergenic | 50.0% | |
| GAAGCTATGCCTGCCTTAGA+AGG | - | chr2.4:49375321-49375340 | MS.gene22545:CDS | 50.0% | |
| GAGGTTGCTTCCTCTCACTT+TGG | - | chr2.4:49373409-49373428 | MS.gene22545:CDS | 50.0% | |
| GAGTGGATGAAGCTGGATTC+TGG | - | chr2.4:49375908-49375927 | MS.gene22545:CDS | 50.0% | |
| GATTGCTCCGGTTACCACAA+AGG | - | chr2.4:49376504-49376523 | MS.gene22545:CDS | 50.0% | |
| GCTAGTGCAGACTTAGACGA+TGG | + | chr2.4:49373752-49373771 | None:intergenic | 50.0% | |
| GGAGTTCAAAGGGAGGAGTT+AGG | - | chr2.4:49376017-49376036 | MS.gene22545:CDS | 50.0% | |
| GGCAAAGGAGTTAATGCCAC+TGG | - | chr2.4:49375260-49375279 | MS.gene22545:CDS | 50.0% | |
| GGTTGTGCCTTTGTGGTAAC+CGG | + | chr2.4:49376514-49376533 | None:intergenic | 50.0% | |
| GTGTATTGGAAGAGGAGGGA+CGG | - | chr2.4:49373188-49373207 | MS.gene22545:CDS | 50.0% | |
| GTTGCTTCCTCTCACTTTGG+AGG | - | chr2.4:49373412-49373431 | MS.gene22545:CDS | 50.0% | |
| GTTTCCTGATCCGAAACCGA+GGG | - | chr2.4:49372983-49373002 | MS.gene22545:CDS | 50.0% | |
| TCAAGCTCCTCCAAAGTGAG+AGG | + | chr2.4:49373422-49373441 | None:intergenic | 50.0% | |
| TCAAGCTGCGGAAGAGGTAA+AGG | - | chr2.4:49373709-49373728 | MS.gene22545:CDS | 50.0% | |
| TCTGCACTAGCCAGCTCAAT+AGG | - | chr2.4:49373761-49373780 | MS.gene22545:CDS | 50.0% | |
| TGAGAAGGAAGCCCTAGATG+GGG | - | chr2.4:49374702-49374721 | MS.gene22545:CDS | 50.0% | |
| TGCAGGTACAACAACAGGGT+TGG | + | chr2.4:49375169-49375188 | None:intergenic | 50.0% | |
| TGCCACTGGAAGATATCACG+GGG | - | chr2.4:49375274-49375293 | MS.gene22545:CDS | 50.0% | |
| TGTATTGGAAGAGGAGGGAC+GGG | - | chr2.4:49373189-49373208 | MS.gene22545:CDS | 50.0% | |
| TGTTTCCTGATCCGAAACCG+AGG | - | chr2.4:49372982-49373001 | MS.gene22545:CDS | 50.0% | |
| TTCCCCGTGATATCTTCCAG+TGG | + | chr2.4:49375279-49375298 | None:intergenic | 50.0% | |
| TTGATGGAAGCAGCAGCATG+AGG | - | chr2.4:49373645-49373664 | MS.gene22545:CDS | 50.0% | |
| TTGCTGGACTTCAGTCCAGA+TGG | + | chr2.4:49375572-49375591 | None:intergenic | 50.0% | |
| TTTCCTGATCCGAAACCGAG+GGG | - | chr2.4:49372984-49373003 | MS.gene22545:CDS | 50.0% | |
| ! | ACAATCTGGGATGTCTGAGG+AGG | - | chr2.4:49375706-49375725 | MS.gene22545:CDS | 50.0% |
| ! | AGCAACAATCTGGTTCACGC+TGG | - | chr2.4:49376407-49376426 | MS.gene22545:CDS | 50.0% |
| ! | CTCGGATTCTGAAAACGAGC+CGG | - | chr2.4:49374648-49374667 | MS.gene22545:CDS | 50.0% |
| ! | GATGCTCCTTCTGAAGGTCT+TGG | + | chr2.4:49374846-49374865 | None:intergenic | 50.0% |
| ! | GGCAGAAAATGCGGTTTGCT+AGG | - | chr2.4:49376058-49376077 | MS.gene22545:CDS | 50.0% |
| ! | GTACCTGCAGAAATGGGTTC+CGG | - | chr2.4:49375180-49375199 | MS.gene22545:CDS | 50.0% |
| ! | TACCTGCAGAAATGGGTTCC+GGG | - | chr2.4:49375181-49375200 | MS.gene22545:CDS | 50.0% |
| ! | TCACGCTGGTTGCTTGCTAA+TGG | - | chr2.4:49376421-49376440 | MS.gene22545:CDS | 50.0% |
| ! | TCTCACTTTGGAGGAGCTTG+AGG | - | chr2.4:49373421-49373440 | MS.gene22545:CDS | 50.0% |
| ! | TTTTCAGAATCCGAGCCTGC+TGG | + | chr2.4:49374643-49374662 | None:intergenic | 50.0% |
| !! | CTTCTAATGGCTCTGAGCAG+TGG | - | chr2.4:49374785-49374804 | MS.gene22545:CDS | 50.0% |
| !! | GCAAGCATTGGTGTTCCAAC+TGG | + | chr2.4:49376142-49376161 | None:intergenic | 50.0% |
| !! | TGTTGGTGATAACACCAGCG+CGG | - | chr2.4:49373535-49373554 | MS.gene22545:CDS | 50.0% |
| AACACCAGCGCGGCAAAAGA+TGG | - | chr2.4:49373545-49373564 | MS.gene22545:CDS | 55.0% | |
| AAGAAAAGGGCCCAACCCCT+CGG | + | chr2.4:49375058-49375077 | None:intergenic | 55.0% | |
| AAGGGAGGAGTTAGGAGACG+AGG | - | chr2.4:49376025-49376044 | MS.gene22545:CDS | 55.0% | |
| AATCCGAGCCTGCTGGACTA+TGG | + | chr2.4:49374636-49374655 | None:intergenic | 55.0% | |
| ACCAGATTGTTGCTGCGTCG+AGG | + | chr2.4:49376401-49376420 | None:intergenic | 55.0% | |
| ACCTCGACGCAGCAACAATC+TGG | - | chr2.4:49376397-49376416 | MS.gene22545:CDS | 55.0% | |
| AGAAGCTCTCTCGGAGACTC+CGG | + | chr2.4:49374670-49374689 | None:intergenic | 55.0% | |
| AGTGCGCCGGAGCTTGATTT+GGG | - | chr2.4:49373365-49373384 | MS.gene22545:CDS | 55.0% | |
| ATCCCGGAACCCATTTCTGC+AGG | + | chr2.4:49375186-49375205 | None:intergenic | 55.0% | |
| ATCCGAGCCTGCTGGACTAT+GGG | + | chr2.4:49374635-49374654 | None:intergenic | 55.0% | |
| ATGCTCCACAAAGTGGCAGC+AGG | + | chr2.4:49376535-49376554 | None:intergenic | 55.0% | |
| ATGGAAGCAGCAGCATGAGG+CGG | - | chr2.4:49373648-49373667 | MS.gene22545:CDS | 55.0% | |
| CTGGACTTCAGTCCAGATGG+TGG | + | chr2.4:49375569-49375588 | None:intergenic | 55.0% | |
| CTTGAGGAGGAGAAGAGCTC+GGG | - | chr2.4:49373437-49373456 | MS.gene22545:CDS | 55.0% | |
| GAGAAGGAAGCCCTAGATGG+GGG | - | chr2.4:49374703-49374722 | MS.gene22545:CDS | 55.0% | |
| GATCCGAAACCGAGGGGTAA+AGG | - | chr2.4:49372990-49373009 | MS.gene22545:CDS | 55.0% | |
| GCTTGAGGAGGAGAAGAGCT+CGG | - | chr2.4:49373436-49373455 | MS.gene22545:CDS | 55.0% | |
| GGAGTTAGGAGACGAGGCAA+AGG | - | chr2.4:49376031-49376050 | MS.gene22545:CDS | 55.0% | |
| GGCAACGTAGGAAGCTCTTC+AGG | + | chr2.4:49375027-49375046 | None:intergenic | 55.0% | |
| GGCTAAGGTGGTTCAGTGTG+TGG | - | chr2.4:49373229-49373248 | MS.gene22545:CDS | 55.0% | |
| GGGGAAATGTCAGCTCTGCA+AGG | - | chr2.4:49375761-49375780 | MS.gene22545:CDS | 55.0% | |
| GTATTGGAAGAGGAGGGACG+GGG | - | chr2.4:49373190-49373209 | MS.gene22545:CDS | 55.0% | |
| TATTAACGGCTCCCTCGGCA+TGG | - | chr2.4:49375796-49375815 | MS.gene22545:CDS | 55.0% | |
| TCGGTACTCGTCTCAAGCTG+CGG | - | chr2.4:49373697-49373716 | MS.gene22545:CDS | 55.0% | |
| TTACCCCTCGGTTTCGGATC+AGG | + | chr2.4:49372990-49373009 | None:intergenic | 55.0% | |
| TTGAGGAGGAGAAGAGCTCG+GGG | - | chr2.4:49373438-49373457 | MS.gene22545:CDS | 55.0% | |
| ! | AATTCGGTGGCCAACCACAC+AGG | - | chr2.4:49375602-49375621 | MS.gene22545:CDS | 55.0% |
| ! | AGAAAAGGCGTGCAGCTCTC+TGG | - | chr2.4:49373808-49373827 | MS.gene22545:CDS | 55.0% |
| ! | CACTTTGGAGGAGCTTGAGG+AGG | - | chr2.4:49373424-49373443 | MS.gene22545:CDS | 55.0% |
| ! | CGGTGTCTGGTTCGAATTCG+AGG | - | chr2.4:49372937-49372956 | MS.gene22545:CDS | 55.0% |
| ! | TTTGGTGACTCGTCCGGCTA+AGG | - | chr2.4:49373214-49373233 | MS.gene22545:CDS | 55.0% |
| !! | CACAACCTGCTGCCACTTTG+TGG | - | chr2.4:49376527-49376546 | MS.gene22545:CDS | 55.0% |
| !! | GCTTCGAGGAATTCGGTGTC+TGG | - | chr2.4:49372924-49372943 | MS.gene22545:CDS | 55.0% |
| ACGTTGCCTCCTCTTGCCGA+GGG | - | chr2.4:49375039-49375058 | MS.gene22545:CDS | 60.0% | |
| AGCCCATAGTCCAGCAGGCT+CGG | - | chr2.4:49374630-49374649 | MS.gene22545:CDS | 60.0% | |
| AGGAGAAGAGCTCGGGGAAG+TGG | - | chr2.4:49373444-49373463 | MS.gene22545:CDS | 60.0% | |
| AGGAGACGAGGCAAAGGCTC+CGG | - | chr2.4:49376037-49376056 | MS.gene22545:CDS | 60.0% | |
| CAGTGCGCCGGAGCTTGATT+TGG | - | chr2.4:49373364-49373383 | MS.gene22545:CDS | 60.0% | |
| CTCGTCTCAAGCTGCGGAAG+AGG | - | chr2.4:49373703-49373722 | MS.gene22545:CDS | 60.0% | |
| GACACAGCCCATAGTCCAGC+AGG | - | chr2.4:49374625-49374644 | MS.gene22545:CDS | 60.0% | |
| GGCAGCAGGTTGTGCCTTTG+TGG | + | chr2.4:49376521-49376540 | None:intergenic | 60.0% | |
| TACGTTGCCTCCTCTTGCCG+AGG | - | chr2.4:49375038-49375057 | MS.gene22545:CDS | 60.0% | |
| TCGGCAAGAGGAGGCAACGT+AGG | + | chr2.4:49375039-49375058 | None:intergenic | 60.0% | |
| TGCTTCGCTTCTCAGTGCGC+CGG | - | chr2.4:49373352-49373371 | MS.gene22545:CDS | 60.0% | |
| TGGAAGCAGCAGCATGAGGC+GGG | - | chr2.4:49373649-49373668 | MS.gene22545:CDS | 60.0% | |
| ! | ATGGCCATCTTTTGCCGCGC+TGG | + | chr2.4:49373552-49373571 | None:intergenic | 60.0% |
| ! | GAAGAGGAGGGACGGGGTTT+TGG | - | chr2.4:49373196-49373215 | MS.gene22545:CDS | 60.0% |
| ! | GTGCGCCGGAGCTTGATTTG+GGG | - | chr2.4:49373366-49373385 | MS.gene22545:CDS | 60.0% |
| !! | CGGGGTTTTGGTGACTCGTC+CGG | - | chr2.4:49373208-49373227 | MS.gene22545:CDS | 60.0% |
| !! | GGCTGCTGGTTTGCAGCTGA+TGG | - | chr2.4:49375823-49375842 | MS.gene22545:CDS | 60.0% |
| AACGGCTCCCTCGGCATGGA+AGG | - | chr2.4:49375800-49375819 | MS.gene22545:CDS | 65.0% | |
| ACGGCTCCCTCGGCATGGAA+GGG | - | chr2.4:49375801-49375820 | MS.gene22545:CDS | 65.0% | |
| AGCAGCCCCTTCCATGCCGA+GGG | + | chr2.4:49375810-49375829 | None:intergenic | 65.0% | |
| CCTCCTCTTGCCGAGGGGTT+GGG | - | chr2.4:49375045-49375064 | MS.gene22545:CDS | 65.0% | |
| CGTTGCCTCCTCTTGCCGAG+GGG | - | chr2.4:49375040-49375059 | MS.gene22545:CDS | 65.0% | |
| GGTGACTCGTCCGGCTAAGG+TGG | - | chr2.4:49373217-49373236 | MS.gene22545:CDS | 65.0% | |
| AGCAGCAGCATGAGGCGGGC+CGG | - | chr2.4:49373653-49373672 | MS.gene22545:CDS | 70.0% | |
| CAGCAGCCCCTTCCATGCCG+AGG | + | chr2.4:49375811-49375830 | None:intergenic | 70.0% | |
| CCCAACCCCTCGGCAAGAGG+AGG | + | chr2.4:49375048-49375067 | None:intergenic | 70.0% | |
| CGGCTCCCTCGGCATGGAAG+GGG | - | chr2.4:49375802-49375821 | MS.gene22545:CDS | 70.0% | |
| CTCGGCATGGAAGGGGCTGC+TGG | - | chr2.4:49375809-49375828 | MS.gene22545:CDS | 70.0% | |
| GCCTCCTCTTGCCGAGGGGT+TGG | - | chr2.4:49375044-49375063 | MS.gene22545:CDS | 70.0% | |
| GGGCCCAACCCCTCGGCAAG+AGG | + | chr2.4:49375051-49375070 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 49372813 | 49376657 | 49372813 | ID=MS.gene22545 |
| chr2.4 | mRNA | 49372813 | 49376657 | 49372813 | ID=MS.gene22545.t1;Parent=MS.gene22545 |
| chr2.4 | exon | 49374118 | 49376657 | 49374118 | ID=MS.gene22545.t1.exon1;Parent=MS.gene22545.t1 |
| chr2.4 | CDS | 49374118 | 49376657 | 49374118 | ID=cds.MS.gene22545.t1;Parent=MS.gene22545.t1 |
| chr2.4 | exon | 49372813 | 49373977 | 49372813 | ID=MS.gene22545.t1.exon2;Parent=MS.gene22545.t1 |
| chr2.4 | CDS | 49372813 | 49373977 | 49372813 | ID=cds.MS.gene22545.t1;Parent=MS.gene22545.t1 |
| Gene Sequence |
| Protein sequence |
