Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26945.t1 | KEH40108.1 | 99.1 | 649 | 6 | 0 | 1 | 649 | 1 | 649 | 0.00E+00 | 1273.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26945.t1 | Q9FRK5 | 52.3 | 660 | 261 | 14 | 1 | 649 | 1 | 617 | 6.9e-164 | 578.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26945.t1 | A0A072VF81 | 99.1 | 649 | 6 | 0 | 1 | 649 | 1 | 649 | 0.0e+00 | 1273.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049227 | MS.gene26945 | 0.81674 | 4.73E-52 | -1.69E-46 |
| MS.gene049411 | MS.gene26945 | 0.837444 | 5.18E-57 | -1.69E-46 |
| MS.gene049807 | MS.gene26945 | 0.847584 | 1.05E-59 | -1.69E-46 |
| MS.gene051234 | MS.gene26945 | 0.866845 | 2.12E-65 | -1.69E-46 |
| MS.gene052072 | MS.gene26945 | 0.802421 | 5.65E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene26945 | -0.813769 | 2.16E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene26945 | 0.812207 | 4.76E-51 | -1.69E-46 |
| MS.gene052335 | MS.gene26945 | 0.81151 | 6.75E-51 | -1.69E-46 |
| MS.gene053143 | MS.gene26945 | 0.837376 | 5.39E-57 | -1.69E-46 |
| MS.gene053536 | MS.gene26945 | 0.820684 | 6.02E-53 | -1.69E-46 |
| MS.gene053538 | MS.gene26945 | 0.819356 | 1.21E-52 | -1.69E-46 |
| MS.gene054004 | MS.gene26945 | 0.844097 | 9.34E-59 | -1.69E-46 |
| MS.gene054005 | MS.gene26945 | 0.805812 | 1.11E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene26945 | 0.819628 | 1.05E-52 | -1.69E-46 |
| MS.gene055221 | MS.gene26945 | 0.81184 | 5.73E-51 | -1.69E-46 |
| MS.gene055339 | MS.gene26945 | 0.836494 | 9.06E-57 | -1.69E-46 |
| MS.gene056578 | MS.gene26945 | 0.815794 | 7.70E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene26945 | 0.83459 | 2.74E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene26945 | 0.807177 | 5.74E-50 | -1.69E-46 |
| MS.gene058492 | MS.gene26945 | 0.813705 | 2.24E-51 | -1.69E-46 |
| MS.gene05859 | MS.gene26945 | 0.815005 | 1.15E-51 | -1.69E-46 |
| MS.gene05860 | MS.gene26945 | 0.819206 | 1.31E-52 | -1.69E-46 |
| MS.gene05894 | MS.gene26945 | 0.813894 | 2.03E-51 | -1.69E-46 |
| MS.gene059424 | MS.gene26945 | 0.8149 | 1.22E-51 | -1.69E-46 |
| MS.gene05971 | MS.gene26945 | 0.803858 | 2.85E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene26945 | 0.879765 | 9.54E-70 | -1.69E-46 |
| MS.gene059802 | MS.gene26945 | 0.827141 | 1.84E-54 | -1.69E-46 |
| MS.gene061100 | MS.gene26945 | 0.845636 | 3.59E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26945.t1 | MTR_1g022045 | 99.076 | 649 | 6 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1322 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26945.t1 | AT1G75140 | 57.014 | 663 | 225 | 16 | 1 | 649 | 1 | 617 | 0.0 | 691 |
| MS.gene26945.t1 | AT1G19370 | 54.795 | 657 | 237 | 16 | 1 | 649 | 1 | 605 | 0.0 | 660 |
Find 151 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCAGGGTCATTGGATTTA+AGG | 0.156932 | 1.3:+3002010 | MS.gene26945:CDS |
| TCTTGCCTTGCAAGCAATTA+AGG | 0.160564 | 1.3:+3002230 | MS.gene26945:CDS |
| GCTTATTGTTAACCCTAAAA+AGG | 0.215485 | 1.3:+3002260 | MS.gene26945:CDS |
| ATTTGCATCTGCTGTGAAAT+TGG | 0.223785 | 1.3:+3001477 | MS.gene26945:CDS |
| AACCCTTCATGATCCTTAAA+AGG | 0.231418 | 1.3:-3001529 | None:intergenic |
| TTGAATTCACCTTTATAAAT+AGG | 0.254344 | 1.3:-3002507 | None:intergenic |
| GAATGTTGATACATAGAGTT+TGG | 0.278494 | 1.3:+3001725 | MS.gene26945:CDS |
| CGATACTAGTGGGAAGATTA+AGG | 0.281011 | 1.3:+3001891 | MS.gene26945:CDS |
| TGTAAGTGCTTCCTTCTTCT+TGG | 0.283846 | 1.3:-3002598 | None:intergenic |
| ACATGCCATCTCTTCGTTTA+GGG | 0.284583 | 1.3:-3002932 | None:intergenic |
| CTCCGACCCTGCTCGAAAAT+CGG | 0.286064 | 1.3:-3002871 | None:intergenic |
| GTTGTAACTGGTCATGAAAA+TGG | 0.297865 | 1.3:+3001700 | MS.gene26945:CDS |
| TCCAATCTACCTATTTATAA+AGG | 0.304783 | 1.3:+3002498 | MS.gene26945:CDS |
| GATTGTATTGAACATGATTC+AGG | 0.304864 | 1.3:-3001127 | None:intergenic |
| TTTATTGGATTCACCTATTA+CGG | 0.311308 | 1.3:+3001636 | MS.gene26945:CDS |
| GAACATGATTCAGGGCTTAA+AGG | 0.316444 | 1.3:-3001118 | None:intergenic |
| AAGTAGGTTTACTCAGATAA+AGG | 0.325958 | 1.3:+3001318 | MS.gene26945:CDS |
| AATGAGAGCTTTGTTGTAAC+TGG | 0.327015 | 1.3:+3001688 | MS.gene26945:CDS |
| AACATGCCATCTCTTCGTTT+AGG | 0.327521 | 1.3:-3002933 | None:intergenic |
| TACGAAACCATCGCCGTAAT+AGG | 0.332437 | 1.3:-3001649 | None:intergenic |
| ACCTTTATAAATAGGTAGAT+TGG | 0.335847 | 1.3:-3002499 | None:intergenic |
| GGTTGAGTTTGATACTTTAT+TGG | 0.336771 | 1.3:+3001621 | MS.gene26945:CDS |
| CTCTGAGAGCTCCACTTCTA+AGG | 0.342609 | 1.3:-3002737 | None:intergenic |
| GAATCATCCAACCCCAAGTT+TGG | 0.344833 | 1.3:+3002380 | MS.gene26945:CDS |
| TAAATATAGGGCATCAACTA+TGG | 0.349327 | 1.3:+3002896 | MS.gene26945:CDS |
| AAAATTATCACTATTTGCTT+TGG | 0.351578 | 1.3:-3001179 | None:intergenic |
| TCCCTTGGCATCATCTAGTT+CGG | 0.356192 | 1.3:+3002662 | MS.gene26945:CDS |
| TGAAATCTCTCTGACCAAAA+AGG | 0.356568 | 1.3:-3001454 | None:intergenic |
| CTTGCTTCGTCATCCAAACT+TGG | 0.358616 | 1.3:-3002393 | None:intergenic |
| AACTTGGGGTTGGATGATTC+AGG | 0.362507 | 1.3:-3002377 | None:intergenic |
| ATCAGCATCTGGTGCTCCCT+TGG | 0.379867 | 1.3:+3002647 | MS.gene26945:CDS |
| CTTGCCTTGCAAGCAATTAA+GGG | 0.383135 | 1.3:+3002231 | MS.gene26945:CDS |
| TCCGACCCTGCTCGAAAATC+GGG | 0.383603 | 1.3:-3002870 | None:intergenic |
| CGAAGAGATGGCATGTTTGT+AGG | 0.385532 | 1.3:+3002939 | MS.gene26945:CDS |
| CTCCTCATTATGTGAGAATC+GGG | 0.386713 | 1.3:+3002304 | MS.gene26945:CDS |
| CTTGTTATTGTTGGCCTTGG+AGG | 0.394015 | 1.3:+3002453 | MS.gene26945:CDS |
| CGTGAAAAGCTTGTTATTGT+TGG | 0.397360 | 1.3:+3002444 | MS.gene26945:CDS |
| AGAAACTGGTGCAGGGTCAT+TGG | 0.398132 | 1.3:+3002002 | MS.gene26945:CDS |
| CCCTTGGCATCATCTAGTTC+GGG | 0.401741 | 1.3:+3002663 | MS.gene26945:CDS |
| TGCAGGGTCATTGGATTTAA+GGG | 0.401947 | 1.3:+3002011 | MS.gene26945:CDS |
| TCTCCTCATTATGTGAGAAT+CGG | 0.413688 | 1.3:+3002303 | MS.gene26945:CDS |
| AGTTGAAGATGTAGAATATG+AGG | 0.417788 | 1.3:+3001378 | MS.gene26945:CDS |
| CAGGGTCGGAGATTAAATAT+AGG | 0.418410 | 1.3:+3002883 | MS.gene26945:CDS |
| TATGAGGGGAAAGCTCAAAA+TGG | 0.424385 | 1.3:+3001394 | MS.gene26945:CDS |
| TTGCTTCGTCATCCAAACTT+GGG | 0.426551 | 1.3:-3002392 | None:intergenic |
| GATCCCTTGGCATCAGCATC+TGG | 0.428564 | 1.3:+3002636 | MS.gene26945:CDS |
| TCAATGGCGGCATCACATAA+AGG | 0.434001 | 1.3:+3001037 | None:intergenic |
| GTAGGAGAGCCATACCTTCT+CGG | 0.439682 | 1.3:-3002771 | None:intergenic |
| GCTGATGCCAAGGGATCATC+TGG | 0.441468 | 1.3:-3002630 | None:intergenic |
| AACATGATTCAGGGCTTAAA+GGG | 0.444442 | 1.3:-3001117 | None:intergenic |
| AAGCTTGTTATTGTTGGCCT+TGG | 0.452927 | 1.3:+3002450 | MS.gene26945:CDS |
| GAGAATCGGGGTGCCTCGTC+CGG | 0.453539 | 1.3:+3002317 | MS.gene26945:CDS |
| AGGGATCGAGCGGAGAGGAT+TGG | 0.453805 | 1.3:+3001749 | MS.gene26945:CDS |
| GAGCGGAGAGGATTGGAGTT+CGG | 0.454464 | 1.3:+3001756 | MS.gene26945:CDS |
| TGGTTTGGCTATAACTTTGT+TGG | 0.455300 | 1.3:+3001828 | MS.gene26945:CDS |
| TTGTAACTGGTCATGAAAAT+GGG | 0.458526 | 1.3:+3001701 | MS.gene26945:CDS |
| ACCGTAAGCCTTGGAACGTT+CGG | 0.459264 | 1.3:-3002106 | None:intergenic |
| AGTAGGTTTACTCAGATAAA+GGG | 0.466339 | 1.3:+3001319 | MS.gene26945:CDS |
| GCTCCAGCAGGAAACCTTGT+AGG | 0.467929 | 1.3:-3002789 | None:intergenic |
| ATGTAATGAACTTCAAATGC+AGG | 0.472022 | 1.3:+3002172 | MS.gene26945:CDS |
| TGTGGCAGTTAGCGACGAAA+AGG | 0.473396 | 1.3:+3001561 | MS.gene26945:CDS |
| AATGTTGATACATAGAGTTT+GGG | 0.473684 | 1.3:+3001726 | MS.gene26945:CDS |
| TTAATTTATGTCTTGTTGCT+TGG | 0.474510 | 1.3:+3002147 | MS.gene26945:CDS |
| ACCGAACGTTCCAAGGCTTA+CGG | 0.474666 | 1.3:+3002105 | MS.gene26945:CDS |
| CGATGCCACCGAACGTTCCA+AGG | 0.477306 | 1.3:+3002098 | MS.gene26945:CDS |
| GTTATTGTTGGCCTTGGAGG+TGG | 0.480940 | 1.3:+3002456 | MS.gene26945:CDS |
| AAATCGGGATCAACCGAAGC+TGG | 0.485044 | 1.3:-3002855 | None:intergenic |
| TAGGTACTTGCTGCTCCAGC+AGG | 0.488751 | 1.3:-3002801 | None:intergenic |
| CCATACCTTCTCGGTGGTGG+TGG | 0.491401 | 1.3:-3002762 | None:intergenic |
| AAAAGTACGAAGAACAATAC+AGG | 0.493218 | 1.3:-3002549 | None:intergenic |
| GTTGAAGATGTAGAATATGA+GGG | 0.497093 | 1.3:+3001379 | MS.gene26945:CDS |
| ATCAGCAGAACCAAGTCTAT+AGG | 0.499473 | 1.3:-3002820 | None:intergenic |
| GGCCTTGGAGGTGGTTATGT+TGG | 0.500374 | 1.3:+3002465 | MS.gene26945:CDS |
| GAGCCATACCTTCTCGGTGG+TGG | 0.500633 | 1.3:-3002765 | None:intergenic |
| ATTGTATTGAACATGATTCA+GGG | 0.502180 | 1.3:-3001126 | None:intergenic |
| AAGAACTTCTGCCGATGTCA+TGG | 0.502840 | 1.3:+3002713 | MS.gene26945:CDS |
| TGAAAATCACGAGAATGGTT+TGG | 0.504411 | 1.3:+3001813 | MS.gene26945:CDS |
| GGATCAACCGAAGCTGGCCT+AGG | 0.505610 | 1.3:-3002849 | None:intergenic |
| AGAAGGAAGCACTTACATCA+TGG | 0.505670 | 1.3:+3002604 | MS.gene26945:CDS |
| TTTGAGAAATGGTGATGTGT+TGG | 0.505711 | 1.3:+3001600 | MS.gene26945:CDS |
| ATATCCCTTAATTGCTTGCA+AGG | 0.508373 | 1.3:-3002235 | None:intergenic |
| AGGGTCGGAGATTAAATATA+GGG | 0.509764 | 1.3:+3002884 | MS.gene26945:CDS |
| TCACAATCCTAGGCCAGCTT+CGG | 0.513487 | 1.3:+3002842 | MS.gene26945:CDS |
| CCACCACCACCGAGAAGGTA+TGG | 0.519438 | 1.3:+3002762 | MS.gene26945:CDS |
| CTTAATCTTCCCACTAGTAT+CGG | 0.520642 | 1.3:-3001890 | None:intergenic |
| GTGAATTCAATACCATGCTA+TGG | 0.523841 | 1.3:+3002520 | MS.gene26945:CDS |
| GTTCTGTCACTCCGAGTGCT+AGG | 0.526531 | 1.3:+3001941 | MS.gene26945:CDS |
| TGACGTAAAACCGTAAGCCT+TGG | 0.532112 | 1.3:-3002115 | None:intergenic |
| TCGTCATCCAAACTTGGGGT+TGG | 0.534310 | 1.3:-3002387 | None:intergenic |
| ATGGGGACCAGATGATCCCT+TGG | 0.536773 | 1.3:+3002623 | MS.gene26945:CDS |
| TGCTTCGTCATCCAAACTTG+GGG | 0.537547 | 1.3:-3002391 | None:intergenic |
| TCTCCTACAAGGTTTCCTGC+TGG | 0.544977 | 1.3:+3002786 | MS.gene26945:CDS |
| AGCACCAGATGCTGATGCCA+AGG | 0.549033 | 1.3:-3002640 | None:intergenic |
| TCACCTGAAAATCACGAGAA+TGG | 0.550569 | 1.3:+3001808 | MS.gene26945:CDS |
| TCAATGCTTGAGGAGAAAAC+CGG | 0.551859 | 1.3:-3002336 | None:intergenic |
| GAAGGAAGCACTTACATCAT+GGG | 0.552127 | 1.3:+3002605 | MS.gene26945:CDS |
| GAAGGTATGGCTCTCCTACA+AGG | 0.552207 | 1.3:+3002775 | MS.gene26945:CDS |
| ATCAAAACAACCACAGCAAG+AGG | 0.553985 | 1.3:+3001273 | MS.gene26945:CDS |
| TTCAGAAACAGATTCATCGT+TGG | 0.554856 | 1.3:-3001155 | None:intergenic |
| GGATTCACCTATTACGGCGA+TGG | 0.555523 | 1.3:+3001642 | MS.gene26945:CDS |
| CGAAAACATAACCTCTAGCA+AGG | 0.557604 | 1.3:-3002077 | None:intergenic |
| CATAACCTCTAGCAAGGGAA+TGG | 0.558567 | 1.3:-3002071 | None:intergenic |
| GCATCAACTATGGATCCTCC+TGG | 0.559135 | 1.3:+3002906 | MS.gene26945:CDS |
| TCAAAATGGTGAGAGAGCTA+AGG | 0.560407 | 1.3:+3001408 | MS.gene26945:CDS |
| CTTGAGGAGAAAACCGGACG+AGG | 0.564181 | 1.3:-3002330 | None:intergenic |
| AAAACTAACGGCCTAGCACT+CGG | 0.565802 | 1.3:-3001952 | None:intergenic |
| GTTCTGCTGATCACAATCCT+AGG | 0.568302 | 1.3:+3002832 | MS.gene26945:CDS |
| CAAAATGGTGAGAGAGCTAA+GGG | 0.568442 | 1.3:+3001409 | MS.gene26945:CDS |
| ATAAAGGGTGATGTTGATGA+TGG | 0.570149 | 1.3:+3001334 | MS.gene26945:CDS |
| GGTTGGATGATTCAGGAATG+AGG | 0.577066 | 1.3:-3002370 | None:intergenic |
| ACCCCGATTCTCACATAATG+AGG | 0.578251 | 1.3:-3002306 | None:intergenic |
| GTTGATACATAGAGTTTGGG+AGG | 0.579213 | 1.3:+3001729 | MS.gene26945:CDS |
| GTGGCAGTTAGCGACGAAAA+GGG | 0.579574 | 1.3:+3001562 | MS.gene26945:CDS |
| GAAACAGATTCATCGTTGGA+TGG | 0.583904 | 1.3:-3001151 | None:intergenic |
| TGAAGGGTTAAGTAAGTATG+TGG | 0.586429 | 1.3:+3001543 | MS.gene26945:CDS |
| CTTTGCTTCAAGAAAACTAA+CGG | 0.587679 | 1.3:-3001964 | None:intergenic |
| TTGAACCATTCCCTTGCTAG+AGG | 0.588040 | 1.3:+3002066 | MS.gene26945:CDS |
| ACCCGAACTAGATGATGCCA+AGG | 0.588300 | 1.3:-3002664 | None:intergenic |
| ACCACAGCAAGAGGTTCCTA+AGG | 0.591540 | 1.3:+3001282 | MS.gene26945:CDS |
| TTAATTGCTTGCAAGGCAAG+AGG | 0.592530 | 1.3:-3002228 | None:intergenic |
| ACCTTAGGAACCTCTTGCTG+TGG | 0.596633 | 1.3:-3001283 | None:intergenic |
| ATTCTATCAGCCGATACTAG+TGG | 0.596692 | 1.3:+3001880 | MS.gene26945:CDS |
| TTCTATCAGCCGATACTAGT+GGG | 0.601289 | 1.3:+3001881 | MS.gene26945:CDS |
| TCTCTTCGTTTAGGGAAACC+AGG | 0.603540 | 1.3:-3002924 | None:intergenic |
| GCACCAGATGCTGATGCCAA+GGG | 0.603889 | 1.3:-3002639 | None:intergenic |
| ATTAGAGAATCTGAATGCGA+AGG | 0.604471 | 1.3:+3002042 | MS.gene26945:CDS |
| GGTTTCCCTAAACGAAGAGA+TGG | 0.605902 | 1.3:+3002927 | MS.gene26945:CDS |
| GCAGGGTCATTGGATTTAAG+GGG | 0.607326 | 1.3:+3002012 | MS.gene26945:CDS |
| GATGTCATGGACCTTAGAAG+TGG | 0.608463 | 1.3:+3002726 | MS.gene26945:CDS |
| GCAGCAAGTACCTATAGACT+TGG | 0.614298 | 1.3:+3002810 | MS.gene26945:CDS |
| GAGGTCCACCACCACCGAGA+AGG | 0.615042 | 1.3:+3002757 | MS.gene26945:CDS |
| TCTAAGCTCATCAATGCTTG+AGG | 0.624847 | 1.3:-3002346 | None:intergenic |
| ACTTCTAAGGTCCATGACAT+CGG | 0.628592 | 1.3:-3002724 | None:intergenic |
| AGAGTTTGGGAGGGATCGAG+CGG | 0.630495 | 1.3:+3001739 | MS.gene26945:CDS |
| TTCCAACATAACCACCTCCA+AGG | 0.632050 | 1.3:-3002467 | None:intergenic |
| TGTAATGAACTTCAAATGCA+GGG | 0.635592 | 1.3:+3002173 | MS.gene26945:CDS |
| TCACGGTCACTAGCTATCAA+CGG | 0.636430 | 1.3:-3002426 | None:intergenic |
| GAAAACATAACCTCTAGCAA+GGG | 0.636680 | 1.3:-3002076 | None:intergenic |
| TTGATACATAGAGTTTGGGA+GGG | 0.638448 | 1.3:+3001730 | MS.gene26945:CDS |
| TTGAAGATGTAGAATATGAG+GGG | 0.651957 | 1.3:+3001380 | MS.gene26945:CDS |
| TACAGGACTAGTCCATAGCA+TGG | 0.656922 | 1.3:-3002532 | None:intergenic |
| AAGGAAGCACTTACATCATG+GGG | 0.662135 | 1.3:+3002606 | MS.gene26945:CDS |
| CTTAGAAGTGGAGCTCTCAG+AGG | 0.667229 | 1.3:+3002738 | MS.gene26945:CDS |
| GTAAGCCTTGGAACGTTCGG+TGG | 0.667431 | 1.3:-3002103 | None:intergenic |
| TGTAACTGGTCATGAAAATG+GGG | 0.671239 | 1.3:+3001702 | MS.gene26945:CDS |
| TTGGGAGGGATCGAGCGGAG+AGG | 0.684923 | 1.3:+3001744 | MS.gene26945:CDS |
| TCCTCATTATGTGAGAATCG+GGG | 0.695613 | 1.3:+3002305 | MS.gene26945:CDS |
| CCCGAACTAGATGATGCCAA+GGG | 0.697441 | 1.3:-3002663 | None:intergenic |
| GGAGAGCCATACCTTCTCGG+TGG | 0.704913 | 1.3:-3002768 | None:intergenic |
| CTTCGTTTAGGGAAACCAGG+AGG | 0.758900 | 1.3:-3002921 | None:intergenic |
| GTAACTGGTCATGAAAATGG+GGG | 0.767450 | 1.3:+3001703 | MS.gene26945:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTATCACTATTTGCTT+TGG | - | chr1.3:3001182-3001201 | None:intergenic | 20.0% |
| !! | ATACAAGAAAAAGTTTGAAA+TGG | + | chr1.3:3002200-3002219 | MS.gene26945:CDS | 20.0% |
| !! | TTGAATTCACCTTTATAAAT+AGG | - | chr1.3:3002510-3002529 | None:intergenic | 20.0% |
| !!! | TAAACACAAAAACCTTTTTA+GGG | - | chr1.3:3002275-3002294 | None:intergenic | 20.0% |
| !!! | TATAAATGTTTTGCCTTTTA+AGG | + | chr1.3:3001516-3001535 | MS.gene26945:CDS | 20.0% |
| !!! | TTAAACACAAAAACCTTTTT+AGG | - | chr1.3:3002276-3002295 | None:intergenic | 20.0% |
| ! | AATGTTGATACATAGAGTTT+GGG | + | chr1.3:3001726-3001745 | MS.gene26945:CDS | 25.0% |
| ! | ACCTTTATAAATAGGTAGAT+TGG | - | chr1.3:3002502-3002521 | None:intergenic | 25.0% |
| ! | ATTGTATTGAACATGATTCA+GGG | - | chr1.3:3001129-3001148 | None:intergenic | 25.0% |
| ! | TCCAATCTACCTATTTATAA+AGG | + | chr1.3:3002498-3002517 | MS.gene26945:CDS | 25.0% |
| ! | TTTATTGGATTCACCTATTA+CGG | + | chr1.3:3001636-3001655 | MS.gene26945:CDS | 25.0% |
| !! | CAAGATTTTTATCTTCTGTT+TGG | + | chr1.3:3001060-3001079 | MS.gene26945:CDS | 25.0% |
| !! | TTAATTTATGTCTTGTTGCT+TGG | + | chr1.3:3002147-3002166 | MS.gene26945:CDS | 25.0% |
| !!! | GTTTATGTGTTTTTGAGAAA+TGG | + | chr1.3:3001589-3001608 | MS.gene26945:CDS | 25.0% |
| AAGTAGGTTTACTCAGATAA+AGG | + | chr1.3:3001318-3001337 | MS.gene26945:CDS | 30.0% | |
| AGGTTGTTCAAGAAAAAAGT+AGG | + | chr1.3:3001302-3001321 | MS.gene26945:CDS | 30.0% | |
| AGTAGGTTTACTCAGATAAA+GGG | + | chr1.3:3001319-3001338 | MS.gene26945:CDS | 30.0% | |
| AGTTGAAGATGTAGAATATG+AGG | + | chr1.3:3001378-3001397 | MS.gene26945:CDS | 30.0% | |
| ATGTAATGAACTTCAAATGC+AGG | + | chr1.3:3002172-3002191 | MS.gene26945:CDS | 30.0% | |
| CTTTGCTTCAAGAAAACTAA+CGG | - | chr1.3:3001967-3001986 | None:intergenic | 30.0% | |
| GAATGTTGATACATAGAGTT+TGG | + | chr1.3:3001725-3001744 | MS.gene26945:CDS | 30.0% | |
| GATTGTATTGAACATGATTC+AGG | - | chr1.3:3001130-3001149 | None:intergenic | 30.0% | |
| GCTTATTGTTAACCCTAAAA+AGG | + | chr1.3:3002260-3002279 | MS.gene26945:CDS | 30.0% | |
| GGTTGAGTTTGATACTTTAT+TGG | + | chr1.3:3001621-3001640 | MS.gene26945:CDS | 30.0% | |
| GTTGAAGATGTAGAATATGA+GGG | + | chr1.3:3001379-3001398 | MS.gene26945:CDS | 30.0% | |
| TGTAATGAACTTCAAATGCA+GGG | + | chr1.3:3002173-3002192 | MS.gene26945:CDS | 30.0% | |
| TTGAAGATGTAGAATATGAG+GGG | + | chr1.3:3001380-3001399 | MS.gene26945:CDS | 30.0% | |
| TTGTAACTGGTCATGAAAAT+GGG | + | chr1.3:3001701-3001720 | MS.gene26945:CDS | 30.0% | |
| ! | AAAAGTACGAAGAACAATAC+AGG | - | chr1.3:3002552-3002571 | None:intergenic | 30.0% |
| ! | CAACAATAACAAGCTTTTCA+CGG | - | chr1.3:3002446-3002465 | None:intergenic | 30.0% |
| ! | TAAATATAGGGCATCAACTA+TGG | + | chr1.3:3002896-3002915 | MS.gene26945:CDS | 30.0% |
| ! | TCGGTTTTTATGGAAAATGT+CGG | + | chr1.3:3001775-3001794 | MS.gene26945:CDS | 30.0% |
| ! | TGGGAAGATTAAGGTTTTTA+AGG | + | chr1.3:3001900-3001919 | MS.gene26945:CDS | 30.0% |
| ! | TGTTGGAAGTTCATTTTGTA+GGG | + | chr1.3:3001845-3001864 | MS.gene26945:CDS | 30.0% |
| ! | TTCTTCGTACTTTTCCTATT+CGG | + | chr1.3:3002558-3002577 | MS.gene26945:CDS | 30.0% |
| ! | TTGTTGGAAGTTCATTTTGT+AGG | + | chr1.3:3001844-3001863 | MS.gene26945:CDS | 30.0% |
| !! | CTTATGTTTTTGACAGAAAC+TGG | + | chr1.3:3001988-3002007 | MS.gene26945:CDS | 30.0% |
| !!! | CTTTTTTCTTGAACAACCTT+AGG | - | chr1.3:3001301-3001320 | None:intergenic | 30.0% |
| AACATGATTCAGGGCTTAAA+GGG | - | chr1.3:3001120-3001139 | None:intergenic | 35.0% | |
| AACCCTTCATGATCCTTAAA+AGG | - | chr1.3:3001532-3001551 | None:intergenic | 35.0% | |
| AGGGTCGGAGATTAAATATA+GGG | + | chr1.3:3002884-3002903 | MS.gene26945:CDS | 35.0% | |
| ATATCCCTTAATTGCTTGCA+AGG | - | chr1.3:3002238-3002257 | None:intergenic | 35.0% | |
| ATTAGAGAATCTGAATGCGA+AGG | + | chr1.3:3002042-3002061 | MS.gene26945:CDS | 35.0% | |
| ATTTGCATCTGCTGTGAAAT+TGG | + | chr1.3:3001477-3001496 | MS.gene26945:CDS | 35.0% | |
| CTTAATCTTCCCACTAGTAT+CGG | - | chr1.3:3001893-3001912 | None:intergenic | 35.0% | |
| GAAAACATAACCTCTAGCAA+GGG | - | chr1.3:3002079-3002098 | None:intergenic | 35.0% | |
| GTGAATTCAATACCATGCTA+TGG | + | chr1.3:3002520-3002539 | MS.gene26945:CDS | 35.0% | |
| GTTGTAACTGGTCATGAAAA+TGG | + | chr1.3:3001700-3001719 | MS.gene26945:CDS | 35.0% | |
| TCTCCTCATTATGTGAGAAT+CGG | + | chr1.3:3002303-3002322 | MS.gene26945:CDS | 35.0% | |
| TGAAAATCACGAGAATGGTT+TGG | + | chr1.3:3001813-3001832 | MS.gene26945:CDS | 35.0% | |
| TGAAATCTCTCTGACCAAAA+AGG | - | chr1.3:3001457-3001476 | None:intergenic | 35.0% | |
| TGAAGGGTTAAGTAAGTATG+TGG | + | chr1.3:3001543-3001562 | MS.gene26945:CDS | 35.0% | |
| TGTAACTGGTCATGAAAATG+GGG | + | chr1.3:3001702-3001721 | MS.gene26945:CDS | 35.0% | |
| TTCAGAAACAGATTCATCGT+TGG | - | chr1.3:3001158-3001177 | None:intergenic | 35.0% | |
| TTGATACATAGAGTTTGGGA+GGG | + | chr1.3:3001730-3001749 | MS.gene26945:CDS | 35.0% | |
| ! | AAACCATTCTCGTGATTTTC+AGG | - | chr1.3:3001814-3001833 | None:intergenic | 35.0% |
| ! | AAGGAAAGCAGTGTGTTTTA+TGG | + | chr1.3:3001919-3001938 | MS.gene26945:CDS | 35.0% |
| ! | ATAAAGGGTGATGTTGATGA+TGG | + | chr1.3:3001334-3001353 | MS.gene26945:CDS | 35.0% |
| ! | TGACCAAAAAGGAGTATACT+TGG | - | chr1.3:3001446-3001465 | None:intergenic | 35.0% |
| ! | TGACCAAGTATACTCCTTTT+TGG | + | chr1.3:3001440-3001459 | MS.gene26945:CDS | 35.0% |
| ! | TGGTTTGGCTATAACTTTGT+TGG | + | chr1.3:3001828-3001847 | MS.gene26945:CDS | 35.0% |
| ! | TTTGAGAAATGGTGATGTGT+TGG | + | chr1.3:3001600-3001619 | MS.gene26945:CDS | 35.0% |
| !! | AATGAGAGCTTTGTTGTAAC+TGG | + | chr1.3:3001688-3001707 | MS.gene26945:CDS | 35.0% |
| !! | CGTGAAAAGCTTGTTATTGT+TGG | + | chr1.3:3002444-3002463 | MS.gene26945:CDS | 35.0% |
| !! | TGCCTTTTAAGGATCATGAA+GGG | + | chr1.3:3001527-3001546 | MS.gene26945:CDS | 35.0% |
| !! | TTGCCTTTTAAGGATCATGA+AGG | + | chr1.3:3001526-3001545 | MS.gene26945:CDS | 35.0% |
| !!! | CGTTAGTTTTCTTGAAGCAA+AGG | + | chr1.3:3001965-3001984 | MS.gene26945:CDS | 35.0% |
| AACATGCCATCTCTTCGTTT+AGG | - | chr1.3:3002936-3002955 | None:intergenic | 40.0% | |
| ACATGCCATCTCTTCGTTTA+GGG | - | chr1.3:3002935-3002954 | None:intergenic | 40.0% | |
| ATCAAAACAACCACAGCAAG+AGG | + | chr1.3:3001273-3001292 | MS.gene26945:CDS | 40.0% | |
| ATCAGCAGAACCAAGTCTAT+AGG | - | chr1.3:3002823-3002842 | None:intergenic | 40.0% | |
| ATTCTATCAGCCGATACTAG+TGG | + | chr1.3:3001880-3001899 | MS.gene26945:CDS | 40.0% | |
| CAAAATGGTGAGAGAGCTAA+GGG | + | chr1.3:3001409-3001428 | MS.gene26945:CDS | 40.0% | |
| CAGGGTCGGAGATTAAATAT+AGG | + | chr1.3:3002883-3002902 | MS.gene26945:CDS | 40.0% | |
| CGAAAACATAACCTCTAGCA+AGG | - | chr1.3:3002080-3002099 | None:intergenic | 40.0% | |
| CGATACTAGTGGGAAGATTA+AGG | + | chr1.3:3001891-3001910 | MS.gene26945:CDS | 40.0% | |
| CTCCTCATTATGTGAGAATC+GGG | + | chr1.3:3002304-3002323 | MS.gene26945:CDS | 40.0% | |
| CTTGCCTTGCAAGCAATTAA+GGG | + | chr1.3:3002231-3002250 | MS.gene26945:CDS | 40.0% | |
| GAAACAGATTCATCGTTGGA+TGG | - | chr1.3:3001154-3001173 | None:intergenic | 40.0% | |
| GAACATGATTCAGGGCTTAA+AGG | - | chr1.3:3001121-3001140 | None:intergenic | 40.0% | |
| GTAACTGGTCATGAAAATGG+GGG | + | chr1.3:3001703-3001722 | MS.gene26945:CDS | 40.0% | |
| GTTGATACATAGAGTTTGGG+AGG | + | chr1.3:3001729-3001748 | MS.gene26945:CDS | 40.0% | |
| TATGAGGGGAAAGCTCAAAA+TGG | + | chr1.3:3001394-3001413 | MS.gene26945:CDS | 40.0% | |
| TCAAAATGGTGAGAGAGCTA+AGG | + | chr1.3:3001408-3001427 | MS.gene26945:CDS | 40.0% | |
| TCAATGCTTGAGGAGAAAAC+CGG | - | chr1.3:3002339-3002358 | None:intergenic | 40.0% | |
| TCACCTGAAAATCACGAGAA+TGG | + | chr1.3:3001808-3001827 | MS.gene26945:CDS | 40.0% | |
| TCCTCATTATGTGAGAATCG+GGG | + | chr1.3:3002305-3002324 | MS.gene26945:CDS | 40.0% | |
| TCTAAGCTCATCAATGCTTG+AGG | - | chr1.3:3002349-3002368 | None:intergenic | 40.0% | |
| TCTTGCCTTGCAAGCAATTA+AGG | + | chr1.3:3002230-3002249 | MS.gene26945:CDS | 40.0% | |
| TGCAGGGTCATTGGATTTAA+GGG | + | chr1.3:3002011-3002030 | MS.gene26945:CDS | 40.0% | |
| TGTAAGTGCTTCCTTCTTCT+TGG | - | chr1.3:3002601-3002620 | None:intergenic | 40.0% | |
| TTAATTGCTTGCAAGGCAAG+AGG | - | chr1.3:3002231-3002250 | None:intergenic | 40.0% | |
| TTCTATCAGCCGATACTAGT+GGG | + | chr1.3:3001881-3001900 | MS.gene26945:CDS | 40.0% | |
| TTGCTTCGTCATCCAAACTT+GGG | - | chr1.3:3002395-3002414 | None:intergenic | 40.0% | |
| ! | GGATTGGAGTTCGGTTTTTA+TGG | + | chr1.3:3001765-3001784 | MS.gene26945:CDS | 40.0% |
| ! | TGGAAGTTCATTTTGTAGGG+AGG | + | chr1.3:3001848-3001867 | MS.gene26945:CDS | 40.0% |
| ! | TTTTGACAGAAACTGGTGCA+GGG | + | chr1.3:3001995-3002014 | MS.gene26945:CDS | 40.0% |
| ! | TTTTTGACAGAAACTGGTGC+AGG | + | chr1.3:3001994-3002013 | MS.gene26945:CDS | 40.0% |
| !! | AAAAATGCCAAGCACCGAAT+AGG | - | chr1.3:3002575-3002594 | None:intergenic | 40.0% |
| !! | AAGCTTGTTATTGTTGGCCT+TGG | + | chr1.3:3002450-3002469 | MS.gene26945:CDS | 40.0% |
| !! | AAGGAAGCACTTACATCATG+GGG | + | chr1.3:3002606-3002625 | MS.gene26945:CDS | 40.0% |
| !! | ACTTCTAAGGTCCATGACAT+CGG | - | chr1.3:3002727-3002746 | None:intergenic | 40.0% |
| !! | AGAAGGAAGCACTTACATCA+TGG | + | chr1.3:3002604-3002623 | MS.gene26945:CDS | 40.0% |
| !! | GAAGGAAGCACTTACATCAT+GGG | + | chr1.3:3002605-3002624 | MS.gene26945:CDS | 40.0% |
| !!! | GCATTTTTTCGCCAAGAAGA+AGG | + | chr1.3:3002587-3002606 | MS.gene26945:CDS | 40.0% |
| !!! | TACTTTTCCTATTCGGTGCT+TGG | + | chr1.3:3002565-3002584 | MS.gene26945:CDS | 40.0% |
| AAAACTAACGGCCTAGCACT+CGG | - | chr1.3:3001955-3001974 | None:intergenic | 45.0% | |
| AACTTGGGGTTGGATGATTC+AGG | - | chr1.3:3002380-3002399 | None:intergenic | 45.0% | |
| AAGAACTTCTGCCGATGTCA+TGG | + | chr1.3:3002713-3002732 | MS.gene26945:CDS | 45.0% | |
| ACCCCGATTCTCACATAATG+AGG | - | chr1.3:3002309-3002328 | None:intergenic | 45.0% | |
| CATAACCTCTAGCAAGGGAA+TGG | - | chr1.3:3002074-3002093 | None:intergenic | 45.0% | |
| CGAAGAGATGGCATGTTTGT+AGG | + | chr1.3:3002939-3002958 | MS.gene26945:CDS | 45.0% | |
| CTTGCTTCGTCATCCAAACT+TGG | - | chr1.3:3002396-3002415 | None:intergenic | 45.0% | |
| GAATCATCCAACCCCAAGTT+TGG | + | chr1.3:3002380-3002399 | MS.gene26945:CDS | 45.0% | |
| GATGTCATGGACCTTAGAAG+TGG | + | chr1.3:3002726-3002745 | MS.gene26945:CDS | 45.0% | |
| GCAGCAAGTACCTATAGACT+TGG | + | chr1.3:3002810-3002829 | MS.gene26945:CDS | 45.0% | |
| GCAGGGTCATTGGATTTAAG+GGG | + | chr1.3:3002012-3002031 | MS.gene26945:CDS | 45.0% | |
| GGTTGGATGATTCAGGAATG+AGG | - | chr1.3:3002373-3002392 | None:intergenic | 45.0% | |
| GGTTTCCCTAAACGAAGAGA+TGG | + | chr1.3:3002927-3002946 | MS.gene26945:CDS | 45.0% | |
| GTGCAGGGTCATTGGATTTA+AGG | + | chr1.3:3002010-3002029 | MS.gene26945:CDS | 45.0% | |
| GTTCTGCTGATCACAATCCT+AGG | + | chr1.3:3002832-3002851 | MS.gene26945:CDS | 45.0% | |
| TACGAAACCATCGCCGTAAT+AGG | - | chr1.3:3001652-3001671 | None:intergenic | 45.0% | |
| TCACGGTCACTAGCTATCAA+CGG | - | chr1.3:3002429-3002448 | None:intergenic | 45.0% | |
| TCCCTTGGCATCATCTAGTT+CGG | + | chr1.3:3002662-3002681 | MS.gene26945:CDS | 45.0% | |
| TCTCTTCGTTTAGGGAAACC+AGG | - | chr1.3:3002927-3002946 | None:intergenic | 45.0% | |
| TGACGTAAAACCGTAAGCCT+TGG | - | chr1.3:3002118-3002137 | None:intergenic | 45.0% | |
| TGCTTCGTCATCCAAACTTG+GGG | - | chr1.3:3002394-3002413 | None:intergenic | 45.0% | |
| TTCCAACATAACCACCTCCA+AGG | - | chr1.3:3002470-3002489 | None:intergenic | 45.0% | |
| TTGAACCATTCCCTTGCTAG+AGG | + | chr1.3:3002066-3002085 | MS.gene26945:CDS | 45.0% | |
| ! | GCTTACGGTTTTACGTCAGA+TGG | + | chr1.3:3002120-3002139 | MS.gene26945:CDS | 45.0% |
| !! | CTTGTTATTGTTGGCCTTGG+AGG | + | chr1.3:3002453-3002472 | MS.gene26945:CDS | 45.0% |
| !! | TACAGGACTAGTCCATAGCA+TGG | - | chr1.3:3002535-3002554 | None:intergenic | 45.0% |
| !! | TTGATCCCGATTTTCGAGCA+GGG | + | chr1.3:3002865-3002884 | MS.gene26945:CDS | 45.0% |
| AAATCGGGATCAACCGAAGC+TGG | - | chr1.3:3002858-3002877 | None:intergenic | 50.0% | |
| ACCACAGCAAGAGGTTCCTA+AGG | + | chr1.3:3001282-3001301 | MS.gene26945:CDS | 50.0% | |
| ACCCGAACTAGATGATGCCA+AGG | - | chr1.3:3002667-3002686 | None:intergenic | 50.0% | |
| ACCGAACGTTCCAAGGCTTA+CGG | + | chr1.3:3002105-3002124 | MS.gene26945:CDS | 50.0% | |
| ACCGTAAGCCTTGGAACGTT+CGG | - | chr1.3:3002109-3002128 | None:intergenic | 50.0% | |
| ACCTTAGGAACCTCTTGCTG+TGG | - | chr1.3:3001286-3001305 | None:intergenic | 50.0% | |
| AGAAACTGGTGCAGGGTCAT+TGG | + | chr1.3:3002002-3002021 | MS.gene26945:CDS | 50.0% | |
| CCCGAACTAGATGATGCCAA+GGG | - | chr1.3:3002666-3002685 | None:intergenic | 50.0% | |
| CTTAGAAGTGGAGCTCTCAG+AGG | + | chr1.3:3002738-3002757 | MS.gene26945:CDS | 50.0% | |
| CTTCGTTTAGGGAAACCAGG+AGG | - | chr1.3:3002924-3002943 | None:intergenic | 50.0% | |
| GCATCAACTATGGATCCTCC+TGG | + | chr1.3:3002906-3002925 | MS.gene26945:CDS | 50.0% | |
| GGATTCACCTATTACGGCGA+TGG | + | chr1.3:3001642-3001661 | MS.gene26945:CDS | 50.0% | |
| GTAGGAGAGCCATACCTTCT+CGG | - | chr1.3:3002774-3002793 | None:intergenic | 50.0% | |
| GTGGCAGTTAGCGACGAAAA+GGG | + | chr1.3:3001562-3001581 | MS.gene26945:CDS | 50.0% | |
| TCACAATCCTAGGCCAGCTT+CGG | + | chr1.3:3002842-3002861 | MS.gene26945:CDS | 50.0% | |
| TCGTCATCCAAACTTGGGGT+TGG | - | chr1.3:3002390-3002409 | None:intergenic | 50.0% | |
| TCTCCTACAAGGTTTCCTGC+TGG | + | chr1.3:3002786-3002805 | MS.gene26945:CDS | 50.0% | |
| TGTGGCAGTTAGCGACGAAA+AGG | + | chr1.3:3001561-3001580 | MS.gene26945:CDS | 50.0% | |
| ! | CCCTTGGCATCATCTAGTTC+GGG | + | chr1.3:3002663-3002682 | MS.gene26945:CDS | 50.0% |
| ! | CTCTGAGAGCTCCACTTCTA+AGG | - | chr1.3:3002740-3002759 | None:intergenic | 50.0% |
| ! | GAAGGTATGGCTCTCCTACA+AGG | + | chr1.3:3002775-3002794 | MS.gene26945:CDS | 50.0% |
| !! | GTTATTGTTGGCCTTGGAGG+TGG | + | chr1.3:3002456-3002475 | MS.gene26945:CDS | 50.0% |
| !! | GTTGATCCCGATTTTCGAGC+AGG | + | chr1.3:3002864-3002883 | MS.gene26945:CDS | 50.0% |
| AGAGTTTGGGAGGGATCGAG+CGG | + | chr1.3:3001739-3001758 | MS.gene26945:CDS | 55.0% | |
| AGCACCAGATGCTGATGCCA+AGG | - | chr1.3:3002643-3002662 | None:intergenic | 55.0% | |
| ATCAGCATCTGGTGCTCCCT+TGG | + | chr1.3:3002647-3002666 | MS.gene26945:CDS | 55.0% | |
| ATGGGGACCAGATGATCCCT+TGG | + | chr1.3:3002623-3002642 | MS.gene26945:CDS | 55.0% | |
| CTCCGACCCTGCTCGAAAAT+CGG | - | chr1.3:3002874-3002893 | None:intergenic | 55.0% | |
| CTTGAGGAGAAAACCGGACG+AGG | - | chr1.3:3002333-3002352 | None:intergenic | 55.0% | |
| GAGCGGAGAGGATTGGAGTT+CGG | + | chr1.3:3001756-3001775 | MS.gene26945:CDS | 55.0% | |
| GATCCCTTGGCATCAGCATC+TGG | + | chr1.3:3002636-3002655 | MS.gene26945:CDS | 55.0% | |
| GCACCAGATGCTGATGCCAA+GGG | - | chr1.3:3002642-3002661 | None:intergenic | 55.0% | |
| GCTCCAGCAGGAAACCTTGT+AGG | - | chr1.3:3002792-3002811 | None:intergenic | 55.0% | |
| GCTGATGCCAAGGGATCATC+TGG | - | chr1.3:3002633-3002652 | None:intergenic | 55.0% | |
| GGCCTTGGAGGTGGTTATGT+TGG | + | chr1.3:3002465-3002484 | MS.gene26945:CDS | 55.0% | |
| GTAAGCCTTGGAACGTTCGG+TGG | - | chr1.3:3002106-3002125 | None:intergenic | 55.0% | |
| GTTCTGTCACTCCGAGTGCT+AGG | + | chr1.3:3001941-3001960 | MS.gene26945:CDS | 55.0% | |
| TCCGACCCTGCTCGAAAATC+GGG | - | chr1.3:3002873-3002892 | None:intergenic | 55.0% | |
| ! | TAGGTACTTGCTGCTCCAGC+AGG | - | chr1.3:3002804-3002823 | None:intergenic | 55.0% |
| !! | TCCCGATTTTCGAGCAGGGT+CGG | + | chr1.3:3002869-3002888 | MS.gene26945:CDS | 55.0% |
| AGGGATCGAGCGGAGAGGAT+TGG | + | chr1.3:3001749-3001768 | MS.gene26945:CDS | 60.0% | |
| CCACCACCACCGAGAAGGTA+TGG | + | chr1.3:3002762-3002781 | MS.gene26945:CDS | 60.0% | |
| CGATGCCACCGAACGTTCCA+AGG | + | chr1.3:3002098-3002117 | MS.gene26945:CDS | 60.0% | |
| GAGCCATACCTTCTCGGTGG+TGG | - | chr1.3:3002768-3002787 | None:intergenic | 60.0% | |
| GGAGAGCCATACCTTCTCGG+TGG | - | chr1.3:3002771-3002790 | None:intergenic | 60.0% | |
| ! | CCATACCTTCTCGGTGGTGG+TGG | - | chr1.3:3002765-3002784 | None:intergenic | 60.0% |
| ! | GGATCAACCGAAGCTGGCCT+AGG | - | chr1.3:3002852-3002871 | None:intergenic | 60.0% |
| GAGGTCCACCACCACCGAGA+AGG | + | chr1.3:3002757-3002776 | MS.gene26945:CDS | 65.0% | |
| TTGGGAGGGATCGAGCGGAG+AGG | + | chr1.3:3001744-3001763 | MS.gene26945:CDS | 65.0% | |
| ! | GAGAATCGGGGTGCCTCGTC+CGG | + | chr1.3:3002317-3002336 | MS.gene26945:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 3001040 | 3002989 | 3001040 | ID=MS.gene26945 |
| chr1.3 | mRNA | 3001040 | 3002989 | 3001040 | ID=MS.gene26945.t1;Parent=MS.gene26945 |
| chr1.3 | exon | 3001040 | 3002989 | 3001040 | ID=MS.gene26945.t1.exon1;Parent=MS.gene26945.t1 |
| chr1.3 | CDS | 3001040 | 3002989 | 3001040 | ID=cds.MS.gene26945.t1;Parent=MS.gene26945.t1 |
| Gene Sequence |
| Protein sequence |
