AlfalfaGEDB | MS.gene28352

M. sativa cultivar XinJiangDaYe / MS.gene28352

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004553 GO:0005975 GO:0008150 GO:0008152 GO:0016787 GO:0016798 GO:0044238 GO:0071704
PFAM: PF00232.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28352.t1	ABW76287.1	95.6	523	20	1	1	523	1	520	6.70E-302	1045.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28352.t1	B8AVF0	65.1	475	166	0	37	511	34	508	1.7e-192	673.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28352.t1	A8TVQ5	95.6	523	20	1	1	523	1	520	4.8e-302	1045.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051960	MS.gene28352	0.800154	1.65E-48	-1.69E-46
MS.gene052053	MS.gene28352	0.810986	8.77E-51	-1.69E-46
MS.gene053932	MS.gene28352	0.808779	2.62E-50	-1.69E-46
MS.gene055549	MS.gene28352	0.814633	1.39E-51	-1.69E-46
MS.gene055550	MS.gene28352	0.813262	2.80E-51	-1.69E-46
MS.gene056360	MS.gene28352	0.835692	1.45E-56	-1.69E-46
MS.gene056365	MS.gene28352	0.876734	1.10E-68	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene77865	MS.gene28352	PPI
MS.gene47969	MS.gene28352	PPI
MS.gene070469	MS.gene28352	PPI
MS.gene44818	MS.gene28352	PPI
MS.gene46597	MS.gene28352	PPI
MS.gene042247	MS.gene28352	PPI
MS.gene28352	MS.gene047955	PPI
MS.gene28352	MS.gene042246	PPI
MS.gene28352	MS.gene83794	PPI
MS.gene28352	MS.gene63663	PPI
MS.gene28352	MS.gene62057	PPI
MS.gene56477	MS.gene28352	PPI
MS.gene28352	MS.gene58913	PPI
MS.gene28352	MS.gene042245	PPI
MS.gene94835	MS.gene28352	PPI
MS.gene012613	MS.gene28352	PPI
MS.gene000031	MS.gene28352	PPI
MS.gene20732	MS.gene28352	PPI
MS.gene88690	MS.gene28352	PPI
MS.gene28352	MS.gene75053	PPI
MS.gene82370	MS.gene28352	PPI
MS.gene066644	MS.gene28352	PPI
MS.gene006777	MS.gene28352	PPI
MS.gene28352	MS.gene01010	PPI
MS.gene77864	MS.gene28352	PPI
MS.gene56548	MS.gene28352	PPI
MS.gene002910	MS.gene28352	PPI
MS.gene030874	MS.gene28352	PPI
MS.gene28352	MS.gene93590	PPI
MS.gene070468	MS.gene28352	PPI
MS.gene00856	MS.gene28352	PPI
MS.gene28352	MS.gene58871	PPI
MS.gene28352	MS.gene81847	PPI
MS.gene28352	MS.gene96802	PPI
MS.gene28352	MS.gene50342	PPI
MS.gene28248	MS.gene28352	PPI
MS.gene28352	MS.gene07214	PPI
MS.gene43708	MS.gene28352	PPI
MS.gene28352	MS.gene005601	PPI
MS.gene27999	MS.gene28352	PPI
MS.gene28352	MS.gene05298	PPI
MS.gene28352	MS.gene064123	PPI
MS.gene28352	MS.gene57358	PPI
MS.gene01872	MS.gene28352	PPI
MS.gene01870	MS.gene28352	PPI
MS.gene28352	MS.gene031517	PPI
MS.gene28352	MS.gene002906	PPI
MS.gene28352	MS.gene002914	PPI
MS.gene28352	MS.gene87551	PPI
MS.gene00859	MS.gene28352	PPI
MS.gene63664	MS.gene28352	PPI
MS.gene009969	MS.gene28352	PPI
MS.gene28352	MS.gene012612	PPI
MS.gene006844	MS.gene28352	PPI
MS.gene28352	MS.gene000032	PPI
MS.gene58873	MS.gene28352	PPI
MS.gene047952	MS.gene28352	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28352.t1	MTR_4g066590	95.793	523	18	2	1	523	1	519	0.0	1035
MS.gene28352.t1	MTR_4g066630	88.145	523	59	2	1	523	5	524	0.0	938
MS.gene28352.t1	MTR_4g066580	74.662	517	129	1	4	520	8	522	0.0	832
MS.gene28352.t1	MTR_4g066630	89.059	457	48	1	1	457	5	459	0.0	828
MS.gene28352.t1	MTR_3g028720	72.832	519	137	2	6	520	3	521	0.0	816
MS.gene28352.t1	MTR_4g067040	94.878	410	18	1	1	410	1	407	0.0	808
MS.gene28352.t1	MTR_4g066630	89.336	422	43	1	1	422	5	424	0.0	764
MS.gene28352.t1	MTR_4g067040	94.344	389	19	1	1	389	1	386	0.0	764
MS.gene28352.t1	MTR_2g098540	71.486	498	140	1	16	511	8	505	0.0	754
MS.gene28352.t1	MTR_2g098790	68.297	511	159	2	1	511	5	512	0.0	749
MS.gene28352.t1	MTR_2g098520	71.875	480	135	0	32	511	29	508	0.0	746
MS.gene28352.t1	MTR_6g078450	73.109	476	128	0	36	511	35	510	0.0	743
MS.gene28352.t1	MTR_4g066210	68.685	479	150	0	33	511	39	517	0.0	722
MS.gene28352.t1	MTR_3g028720	73.304	457	118	2	6	458	3	459	0.0	722
MS.gene28352.t1	MTR_2g098540	73.246	456	122	0	56	511	6	461	0.0	717
MS.gene28352.t1	MTR_6g078330	70.124	482	142	1	37	518	37	516	0.0	714
MS.gene28352.t1	MTR_4g066240	65.476	504	171	2	8	511	10	510	0.0	713
MS.gene28352.t1	MTR_4g066640	65.941	505	166	3	8	511	12	511	0.0	713
MS.gene28352.t1	MTR_4g066240	65.347	505	171	3	8	511	10	511	0.0	709
MS.gene28352.t1	MTR_6g078380	68.119	505	154	2	8	511	13	511	0.0	702
MS.gene28352.t1	MTR_4g066630	89.628	376	37	1	1	376	5	378	0.0	683
MS.gene28352.t1	MTR_5g071520	64.990	517	171	2	4	511	7	522	0.0	680
MS.gene28352.t1	MTR_4g066580	74.941	423	104	1	4	426	8	428	0.0	679
MS.gene28352.t1	MTR_3g028720	73.286	423	109	2	6	424	3	425	0.0	664
MS.gene28352.t1	MTR_6g078450	73.522	423	112	0	36	458	35	457	0.0	661
MS.gene28352.t1	MTR_4g066330	62.598	508	160	3	6	511	12	491	0.0	650
MS.gene28352.t1	MTR_4g066340	68.519	432	136	0	80	511	6	437	0.0	638
MS.gene28352.t1	MTR_3g026280	62.605	476	173	2	36	511	21	491	0.0	635
MS.gene28352.t1	MTR_4g066280	63.389	478	147	2	36	511	40	491	0.0	633
MS.gene28352.t1	MTR_4g023000	61.134	476	179	3	36	511	23	492	0.0	611
MS.gene28352.t1	MTR_3g028720	72.868	387	101	2	6	388	3	389	0.0	605
MS.gene28352.t1	MTR_6g078330	69.533	407	124	0	105	511	1	407	0.0	605
MS.gene28352.t1	MTR_4g066240	64.819	415	143	2	8	422	10	421	0.0	582
MS.gene28352.t1	MTR_6g078330	66.667	402	130	2	117	518	15	412	0.0	566
MS.gene28352.t1	MTR_2g043200	60.084	476	156	6	42	511	70	517	0.0	566
MS.gene28352.t1	MTR_4g015420	56.627	498	176	7	26	511	54	523	0.0	563
MS.gene28352.t1	MTR_3g026400	54.280	514	219	6	4	514	10	510	0.0	562
MS.gene28352.t1	MTR_3g026620	52.335	514	230	6	4	514	10	511	0.0	538
MS.gene28352.t1	MTR_4g015460	56.996	486	170	9	37	511	42	499	0.0	535
MS.gene28352.t1	MTR_4g066640	65.796	383	125	3	8	389	12	389	0.0	533
MS.gene28352.t1	MTR_4g083000	52.663	507	228	6	9	511	3	501	0.0	532
MS.gene28352.t1	MTR_3g026400	54.697	479	207	6	37	514	10	479	0.0	531
MS.gene28352.t1	MTR_6g078330	73.134	335	90	0	37	371	37	371	0.0	530
MS.gene28352.t1	MTR_5g044000	50.962	520	226	7	17	511	5	520	0.0	522
MS.gene28352.t1	MTR_4g081530	51.235	486	231	5	36	518	23	505	1.32e-168	487
MS.gene28352.t1	MTR_0110s0040	47.945	511	253	7	3	512	13	511	2.07e-167	484
MS.gene28352.t1	MTR_0110s0030	47.451	510	253	7	4	512	16	511	5.36e-166	480
MS.gene28352.t1	MTR_3g033790	48.857	481	232	5	37	517	19	485	4.40e-160	464
MS.gene28352.t1	MTR_3g033810	49.068	483	232	5	36	517	20	489	7.68e-160	464
MS.gene28352.t1	MTR_4g131810	48.233	481	232	5	42	513	33	505	5.87e-156	455
MS.gene28352.t1	MTR_2g022760	48.319	476	241	4	46	519	45	517	1.45e-151	444
MS.gene28352.t1	MTR_4g083000	52.555	411	187	4	105	511	1	407	6.65e-150	435
MS.gene28352.t1	MTR_4g131800	48.093	472	239	5	42	511	521	988	8.53e-147	447
MS.gene28352.t1	MTR_2g079580	44.309	492	261	7	37	523	32	515	1.15e-146	431
MS.gene28352.t1	MTR_2g079550	44.919	492	258	7	37	523	30	513	4.72e-146	430
MS.gene28352.t1	MTR_4g016920	47.071	478	237	7	36	511	26	489	5.27e-146	429
MS.gene28352.t1	MTR_3g026400	57.459	362	140	5	4	362	10	360	6.25e-145	421
MS.gene28352.t1	MTR_7g068910	46.025	478	242	6	36	511	30	493	7.60e-145	426
MS.gene28352.t1	MTR_7g033860	45.135	483	238	7	39	513	50	513	3.30e-142	419
MS.gene28352.t1	MTR_7g068910	45.082	488	242	7	36	511	30	503	1.08e-141	419
MS.gene28352.t1	MTR_2g022710	43.249	511	279	8	6	512	5	508	5.55e-140	414
MS.gene28352.t1	MTR_5g068740	44.400	500	248	10	32	523	22	499	7.19e-137	406
MS.gene28352.t1	MTR_0108s0030	43.271	483	237	5	39	517	5	454	2.06e-136	402
MS.gene28352.t1	MTR_1g088610	45.380	487	238	8	32	511	22	487	5.83e-136	408
MS.gene28352.t1	MTR_1g088610	34.375	128	76	3	397	523	503	623	1.49e-12	70.5
MS.gene28352.t1	MTR_7g051610	44.538	476	244	6	38	512	76	532	1.62e-127	383
MS.gene28352.t1	MTR_0110s0040	47.848	395	196	5	3	395	13	399	1.90e-125	373
MS.gene28352.t1	MTR_7g051510	42.977	477	250	5	38	512	76	532	8.25e-125	376
MS.gene28352.t1	MTR_7g051650	42.977	477	251	6	38	512	76	533	1.53e-123	372
MS.gene28352.t1	MTR_7g051650	42.437	476	251	5	38	512	76	529	1.95e-122	370
MS.gene28352.t1	MTR_2g022760	46.043	417	220	4	105	519	1	414	7.51e-122	364
MS.gene28352.t1	MTR_2g079580	46.429	392	198	6	36	422	31	415	1.26e-121	363
MS.gene28352.t1	MTR_7g068900	45.714	420	202	8	100	511	17	418	8.27e-119	358
MS.gene28352.t1	MTR_4g016920	45.721	409	207	6	105	511	1	396	1.90e-117	353
MS.gene28352.t1	MTR_1g088630	43.368	475	216	12	56	523	14	442	5.48e-117	353
MS.gene28352.t1	MTR_2g022710	42.232	457	254	7	6	458	5	455	1.51e-116	352
MS.gene28352.t1	MTR_2g022710	42.232	457	254	7	6	458	5	455	2.51e-116	352
MS.gene28352.t1	MTR_2g022710	43.468	421	228	7	6	422	5	419	2.15e-113	342
MS.gene28352.t1	MTR_2g022710	42.195	410	232	4	105	512	1	407	7.27e-112	338
MS.gene28352.t1	MTR_2g022710	42.787	409	224	7	6	410	5	407	1.95e-107	327
MS.gene28352.t1	MTR_7g056747	43.614	415	208	4	99	512	9	398	4.55e-106	323
MS.gene28352.t1	MTR_1g088630	50.311	322	124	6	39	356	29	318	2.17e-103	315
MS.gene28352.t1	MTR_2g022710	44.010	384	205	7	6	385	5	382	2.34e-101	311
MS.gene28352.t1	MTR_4g016920	53.558	267	121	2	105	370	1	265	1.30e-95	293
MS.gene28352.t1	MTR_1g088630	53.160	269	114	4	39	303	29	289	1.23e-93	288
MS.gene28352.t1	MTR_0110s0020	51.600	250	117	3	17	266	23	268	3.84e-89	276
MS.gene28352.t1	MTR_5g069350	43.860	171	55	5	351	511	48	187	1.22e-30	118
MS.gene28352.t1	MTR_4g122980	25.761	427	232	12	101	515	183	536	2.85e-29	122
MS.gene28352.t1	MTR_8g038650	39.394	132	67	2	237	358	24	152	5.19e-25	101
MS.gene28352.t1	MTR_8g038650	55.556	54	23	1	46	99	7	59	2.35e-13	68.6
MS.gene28352.t1	MTR_4g061170	80.488	41	6	1	460	498	24	64	4.24e-15	70.5
MS.gene28352.t1	MTR_7g028885	42.857	70	36	1	243	308	21	90	1.58e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28352.t1	AT5G44640	53.772	517	227	5	1	516	1	506	0.0	574
MS.gene28352.t1	AT2G44450	56.211	475	203	2	37	511	31	500	0.0	568
MS.gene28352.t1	AT5G42260	54.528	508	219	5	1	507	1	497	0.0	568
MS.gene28352.t1	AT2G44480	54.375	480	218	1	36	515	34	512	0.0	562
MS.gene28352.t1	AT2G44480	54.375	480	218	1	36	515	65	543	0.0	562
MS.gene28352.t1	AT3G60130	55.208	480	209	3	37	515	30	504	0.0	559
MS.gene28352.t1	AT2G25630	52.465	507	211	6	6	511	6	483	0.0	536
MS.gene28352.t1	AT5G24550	53.170	489	224	5	37	521	32	519	0.0	535
MS.gene28352.t1	AT5G24540	53.579	489	222	5	37	521	32	519	0.0	523
MS.gene28352.t1	AT3G60140	49.900	499	239	6	16	511	12	502	0.0	523
MS.gene28352.t1	AT1G51470	53.862	479	207	7	36	512	44	510	4.50e-180	516
MS.gene28352.t1	AT1G26560	52.490	482	219	6	37	513	32	508	1.13e-178	512
MS.gene28352.t1	AT1G47600	53.236	479	210	7	36	512	44	510	2.55e-177	509
MS.gene28352.t1	AT1G47600	53.236	479	209	7	36	512	44	509	5.22e-177	508
MS.gene28352.t1	AT3G60120	51.660	482	222	7	36	511	13	489	2.83e-174	502
MS.gene28352.t1	AT2G44460	48.276	522	255	6	1	519	3	512	3.70e-173	501
MS.gene28352.t1	AT3G18080	50.719	487	230	7	32	516	34	512	1.19e-170	492
MS.gene28352.t1	AT5G54570	49.691	485	227	4	36	511	29	505	1.83e-170	493
MS.gene28352.t1	AT2G44470	47.239	489	254	4	27	512	19	506	5.75e-170	493
MS.gene28352.t1	AT2G44490	49.795	488	238	6	29	511	7	492	2.22e-169	491
MS.gene28352.t1	AT3G18070	48.984	492	231	9	28	516	21	495	2.39e-165	478
MS.gene28352.t1	AT3G18070	49.187	492	236	9	28	516	21	501	2.05e-164	476
MS.gene28352.t1	AT5G25980	47.719	526	263	9	4	523	17	536	8.99e-164	476
MS.gene28352.t1	AT2G44480	52.311	411	195	1	105	515	1	410	5.48e-163	469
MS.gene28352.t1	AT3G60130	53.589	418	188	3	99	515	40	452	8.36e-163	470
MS.gene28352.t1	AT3G09260	48.340	482	242	6	37	514	35	513	2.69e-159	464
MS.gene28352.t1	AT5G36890	49.895	475	225	4	38	511	17	479	1.94e-158	460
MS.gene28352.t1	AT5G36890	49.895	475	225	4	38	511	17	479	2.47e-158	460
MS.gene28352.t1	AT2G32860	45.322	481	260	3	36	513	93	573	2.03e-156	459
MS.gene28352.t1	AT3G60130	52.632	418	181	4	99	515	40	441	6.00e-156	452
MS.gene28352.t1	AT5G26000	46.899	516	254	10	8	511	4	511	2.67e-155	454
MS.gene28352.t1	AT2G32860	45.322	481	259	4	36	513	93	572	7.33e-155	455
MS.gene28352.t1	AT3G03640	45.614	513	266	6	4	511	8	512	1.50e-154	452
MS.gene28352.t1	AT1G75940	47.454	491	242	9	37	516	37	522	1.95e-154	451
MS.gene28352.t1	AT5G24540	52.830	424	196	4	37	457	32	454	4.16e-153	445
MS.gene28352.t1	AT3G21370	46.311	488	252	8	36	516	32	516	1.67e-152	446
MS.gene28352.t1	AT1G66280	46.154	507	259	9	16	514	13	513	2.84e-150	441
MS.gene28352.t1	AT5G28510	45.842	493	255	7	31	514	33	522	2.99e-150	441
MS.gene28352.t1	AT1G52400	45.205	511	267	10	8	511	11	515	2.11e-149	438
MS.gene28352.t1	AT1G52400	45.205	511	267	10	8	511	11	515	2.11e-149	438
MS.gene28352.t1	AT5G54570	48.724	431	205	3	36	458	29	451	1.54e-147	431
MS.gene28352.t1	AT1G66270	46.488	484	247	8	37	514	36	513	2.13e-147	433
MS.gene28352.t1	AT1G61820	46.817	487	251	7	29	511	22	504	6.04e-147	432
MS.gene28352.t1	AT2G44470	45.958	433	231	3	27	457	19	450	1.92e-146	428
MS.gene28352.t1	AT1G02850	47.368	475	233	7	38	511	27	485	9.71e-146	428
MS.gene28352.t1	AT3G60140	48.900	409	199	5	16	422	12	412	2.57e-145	426
MS.gene28352.t1	AT1G66270	46.281	484	246	9	37	514	36	511	1.91e-144	426
MS.gene28352.t1	AT5G25980	47.484	457	232	6	4	458	17	467	4.02e-143	420
MS.gene28352.t1	AT5G25980	47.484	457	232	6	4	458	17	467	4.02e-143	420
MS.gene28352.t1	AT1G02850	45.181	498	233	8	38	511	27	508	3.26e-141	417
MS.gene28352.t1	AT4G21760	45.975	472	244	6	42	511	59	521	9.76e-141	417
MS.gene28352.t1	AT1G02850	45.291	499	232	9	38	511	27	509	1.13e-139	413
MS.gene28352.t1	AT5G54570	48.317	416	198	4	105	511	1	408	1.05e-137	405
MS.gene28352.t1	AT2G44480	59.936	312	123	2	36	347	65	374	6.57e-137	402
MS.gene28352.t1	AT4G27830	42.292	506	265	7	9	511	3	484	1.27e-136	405
MS.gene28352.t1	AT1G60090	43.673	490	250	10	37	522	24	491	2.31e-136	404
MS.gene28352.t1	AT1G61810	45.267	486	257	8	42	522	38	519	3.27e-136	404
MS.gene28352.t1	AT5G26000	45.987	461	231	8	8	458	4	456	9.33e-136	401
MS.gene28352.t1	AT1G02850	45.895	475	213	8	38	511	27	458	1.06e-135	401
MS.gene28352.t1	AT4G21760	44.915	472	239	7	42	511	59	511	9.57e-134	399
MS.gene28352.t1	AT2G44450	51.977	354	165	2	158	511	1	349	2.08e-133	391
MS.gene28352.t1	AT4G22100	44.561	478	243	9	38	511	23	482	7.29e-133	395
MS.gene28352.t1	AT1G60090	42.400	500	249	11	37	522	24	498	2.93e-132	394
MS.gene28352.t1	AT1G61810	46.204	461	240	7	42	498	38	494	7.09e-132	394
MS.gene28352.t1	AT3G62750	42.041	490	252	8	26	511	12	473	1.97e-129	386
MS.gene28352.t1	AT3G62750	42.041	490	252	8	26	511	38	499	4.21e-129	386
MS.gene28352.t1	AT4G27820	43.750	480	247	7	36	511	22	482	7.87e-129	385
MS.gene28352.t1	AT1G45191	43.724	478	241	9	38	511	30	483	1.63e-127	382
MS.gene28352.t1	AT2G44470	45.646	379	203	3	27	403	19	396	3.17e-126	374
MS.gene28352.t1	AT1G52400	43.860	456	244	9	8	457	11	460	2.38e-124	372
MS.gene28352.t1	AT1G45191	42.300	487	246	9	38	511	30	494	5.09e-124	373
MS.gene28352.t1	AT1G45191	42.469	478	253	9	38	511	30	489	1.80e-123	372
MS.gene28352.t1	AT3G62740	40.900	489	264	10	26	511	12	478	3.23e-123	370
MS.gene28352.t1	AT1G45191	41.851	497	246	10	38	511	30	506	2.62e-122	369
MS.gene28352.t1	AT1G02850	46.569	408	185	6	38	422	27	424	6.14e-121	362
MS.gene28352.t1	AT5G48375	45.414	447	172	9	33	476	34	411	2.40e-120	361
MS.gene28352.t1	AT3G18070	51.497	334	155	5	28	361	21	347	9.59e-119	355
MS.gene28352.t1	AT3G62750	41.553	438	225	7	26	460	38	447	8.40e-112	340
MS.gene28352.t1	AT2G44460	47.956	367	187	4	156	519	1	366	1.38e-111	338
MS.gene28352.t1	AT1G60270	48.256	344	167	5	37	377	24	359	3.65e-111	335
MS.gene28352.t1	AT1G51490	49.573	351	162	7	44	392	27	364	2.10e-109	332
MS.gene28352.t1	AT1G61810	43.262	423	231	8	105	522	1	419	5.71e-109	331
MS.gene28352.t1	AT3G62740	41.784	426	224	9	34	457	20	423	7.14e-109	331
MS.gene28352.t1	AT1G61810	45.128	390	207	6	37	422	33	419	2.29e-108	330
MS.gene28352.t1	AT4G27830	41.707	410	222	5	105	511	1	396	2.43e-106	324
MS.gene28352.t1	AT1G45191	48.512	336	161	5	38	370	30	356	6.68e-106	323
MS.gene28352.t1	AT1G45191	48.512	336	161	5	38	370	30	356	8.16e-106	323
MS.gene28352.t1	AT3G62750	46.246	333	163	4	26	358	12	328	2.05e-104	318
MS.gene28352.t1	AT3G62750	46.246	333	163	4	26	358	12	328	2.05e-104	318
MS.gene28352.t1	AT3G62750	46.246	333	163	4	26	358	38	354	1.61e-103	318
MS.gene28352.t1	AT2G44480	48.013	302	156	1	214	515	6	306	3.87e-101	307
MS.gene28352.t1	AT3G18070	47.590	332	165	6	188	516	99	424	2.43e-100	309
MS.gene28352.t1	AT3G18070	55.556	72	31	1	28	99	21	91	9.37e-19	89.0
MS.gene28352.t1	AT1G61820	45.205	365	193	6	151	511	4	365	7.30e-100	306
MS.gene28352.t1	AT4G27820	42.092	411	220	6	105	511	1	397	2.70e-99	306
MS.gene28352.t1	AT4G27820	42.092	411	220	6	105	511	1	397	2.70e-99	306
MS.gene28352.t1	AT3G62750	39.659	411	221	7	105	511	1	388	1.42e-96	299
MS.gene28352.t1	AT3G62750	39.659	411	221	7	105	511	1	388	1.42e-96	299
MS.gene28352.t1	AT3G18070	46.855	318	160	6	202	516	1	312	2.95e-93	287
MS.gene28352.t1	AT1G61810	51.111	270	130	2	37	306	33	300	9.01e-90	278
MS.gene28352.t1	AT1G60270	47.101	276	139	4	105	377	1	272	1.59e-81	256
MS.gene28352.t1	AT3G18070	45.798	238	125	3	189	424	100	335	3.75e-67	220
MS.gene28352.t1	AT3G18070	55.556	72	31	1	28	99	21	91	5.13e-19	89.0
MS.gene28352.t1	AT3G18070	44.444	225	121	3	202	424	1	223	2.50e-60	199
MS.gene28352.t1	AT5G16580	36.335	322	176	7	152	468	2	299	4.05e-49	171
MS.gene28352.t1	AT3G06510	24.943	441	254	14	100	515	159	547	5.69e-30	124
MS.gene28352.t1	AT3G06510	25.234	428	235	14	100	515	159	513	5.51e-29	121

Find 99 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTATTTGATTATAGGTTTA+TGG	0.113217	4.2:-38787804	MS.gene28352:intron
TTAATTTATATTACTGAAAA+TGG	0.152248	4.2:-38787262	MS.gene28352:intron
TTCCCAGAAGGCTTCATATT+TGG	0.197275	4.2:-38788834	MS.gene28352:CDS
AATTGCACCGGTGGTGATTC+TGG	0.263758	4.2:-38788095	MS.gene28352:CDS
GAATCACCACCGGTGCAATT+TGG	0.269114	4.2:+38788098	None:intergenic
TGATAATGTGCAACTAAATA+TGG	0.279620	4.2:+38788065	None:intergenic
GTGGAAGAGGACCAAGTATA+TGG	0.292452	4.2:-38788767	MS.gene28352:CDS
GAACTTTGCTTCAAAACATT+TGG	0.292593	4.2:-38788227	MS.gene28352:CDS
ATCACTTGAGGAATCACTTA+TGG	0.300312	4.2:-38787060	MS.gene28352:CDS
ATTTCCAGGTTGCTTCAAAT+TGG	0.303894	4.2:-38787351	MS.gene28352:intron
CAACAACCTCATTAATGAAT+TGG	0.310357	4.2:-38788538	MS.gene28352:CDS
TGCAAATAGGTTCATTGAAT+AGG	0.340286	4.2:-38788863	MS.gene28352:CDS
AAGGGTTATACTGTCAGATT+TGG	0.344341	4.2:-38786823	MS.gene28352:CDS
GTGCCAAATATGAAGCCTTC+TGG	0.353921	4.2:+38788831	None:intergenic
TTTCAGTAATATAAATTAAA+GGG	0.356229	4.2:+38787266	None:intergenic
AACACTGCACCATTGCAAAT+AGG	0.356617	4.2:-38788876	MS.gene28352:CDS
AAACTGCAGAAAAGATTTCC+AGG	0.361097	4.2:-38788258	MS.gene28352:intron
TTGGATAATCTCCATTGCTT+AGG	0.366307	4.2:+38787777	None:intergenic
TGGATAATCTCCATTGCTTA+GGG	0.369513	4.2:+38787778	None:intergenic
AGATAACAAACTTGATATAA+AGG	0.370220	4.2:-38787934	MS.gene28352:CDS
CCTCCACTTAGTTTCCCATC+TGG	0.378131	4.2:+38788588	None:intergenic
CAAACTCTAGAAGATGAATA+TGG	0.381482	4.2:-38788389	MS.gene28352:CDS
AAAGTATCAAATCTCTCAAA+AGG	0.385620	4.2:-38788003	MS.gene28352:CDS
ATCTCTCAAAAGGGTGTGAT+AGG	0.386771	4.2:-38787993	MS.gene28352:CDS
CTCCACTTAGTTTCCCATCT+GGG	0.388126	4.2:+38788589	None:intergenic
TGCCAAATATGAAGCCTTCT+GGG	0.396330	4.2:+38788832	None:intergenic
TATTCATCTTCTAGAGTTTG+AGG	0.401353	4.2:+38788392	None:intergenic
CACTTGCTGCACCTTCATAC+TGG	0.408734	4.2:+38788793	None:intergenic
AGAGCTACAGACTTCATGTT+TGG	0.408860	4.2:-38787903	MS.gene28352:CDS
ATACTTTGCATGGTCTTTGT+TGG	0.413214	4.2:-38786863	MS.gene28352:CDS
CAGATTTGGAATGACCTTTG+TGG	0.420663	4.2:-38786809	MS.gene28352:CDS
AGAAAGTCTCGAATTGCTCT+TGG	0.442143	4.2:+38787316	None:intergenic
TGACTCGTATCATCGCTATA+AGG	0.443207	4.2:-38788682	MS.gene28352:CDS
AGTGAATCTGTTAGGTAACT+AGG	0.449660	4.2:+38787608	None:intergenic
CACCAGGTCGATGTTCATCT+TGG	0.454596	4.2:-38788127	MS.gene28352:CDS
ATTAATGAATTGGTGGCAAA+TGG	0.457316	4.2:-38788528	MS.gene28352:intron
CAGGGCTGGTGTAAATGTAA+AGG	0.460153	4.2:-38786887	MS.gene28352:CDS
AAAAGATATCAAAAGCTCTC+AGG	0.470702	4.2:-38786769	MS.gene28352:CDS
AACGAGAAAGTGAATCTGTT+AGG	0.479548	4.2:+38787600	None:intergenic
AGGGCTGGTGTAAATGTAAA+GGG	0.484456	4.2:-38786886	MS.gene28352:CDS
GCAGCAAGTGAAGGTGGAAG+AGG	0.487766	4.2:-38788780	MS.gene28352:CDS
TTGCCACCAATTCATTAATG+AGG	0.489921	4.2:+38788532	None:intergenic
TAGACAACAAGAGAGAGAAT+AGG	0.490371	4.2:+38788946	None:intergenic
GAGTATTCTAGACCAAGAAA+TGG	0.492330	4.2:+38788611	None:intergenic
AACACTTACATTTAGACCAA+TGG	0.493905	4.2:+38787454	None:intergenic
TCATTTATTCTATCTTAATG+AGG	0.494555	4.2:-38787009	MS.gene28352:CDS
CAACCTCATTAATGAATTGG+TGG	0.495036	4.2:-38788535	MS.gene28352:CDS
GGTTTGCCATTGCTTAATTG+AGG	0.496883	4.2:+38787629	None:intergenic
TGGGTATGCAAATGGTGAAA+TGG	0.498834	4.2:-38788150	MS.gene28352:CDS
AAAACATGCGAGCCTTGGTT+AGG	0.500945	4.2:-38787754	MS.gene28352:CDS
CCATGGACTTACAGTCAAGA+TGG	0.501018	4.2:-38788170	MS.gene28352:CDS
TTCATTATCACTTTAACAGA+CGG	0.505204	4.2:-38788912	MS.gene28352:CDS
AGTTTACAAAAGAGCAATCA+AGG	0.505341	4.2:-38787718	MS.gene28352:CDS
AGCAAAGTTCTGCATAGTCC+TGG	0.506435	4.2:+38788240	None:intergenic
ATGTGCAACTAAATATGGTT+CGG	0.507608	4.2:+38788070	None:intergenic
AGTCAAGATGGGTATGCAAA+TGG	0.507686	4.2:-38788158	MS.gene28352:CDS
CATCGCTATAAGGAAGATGT+TGG	0.525320	4.2:-38788672	MS.gene28352:CDS
TTCAATGAACCTATTTGCAA+TGG	0.527927	4.2:+38788867	None:intergenic
TGGAAGAGGACCAAGTATAT+GGG	0.531156	4.2:-38788766	MS.gene28352:CDS
AATAGGAATGATTTCCCAGA+AGG	0.533501	4.2:-38788846	MS.gene28352:CDS
CTACAGACTTCATGTTTGGA+TGG	0.540670	4.2:-38787899	MS.gene28352:intron
AAAATCAGTGATGGAAACAA+TGG	0.553564	4.2:-38788717	MS.gene28352:CDS
GATTCCTCAAGTGATAATGA+TGG	0.553887	4.2:+38787068	None:intergenic
TTGGAGATAGAGTAAAACAT+TGG	0.559088	4.2:-38788208	MS.gene28352:CDS
TGGTCTAGAATACTCCCAGA+TGG	0.563550	4.2:-38788603	MS.gene28352:CDS
AAGTATCAAATCTCTCAAAA+GGG	0.567104	4.2:-38788002	MS.gene28352:CDS
ATCAAAAGCTCTCAGGATTG+TGG	0.567379	4.2:-38786762	MS.gene28352:CDS
GTGAAAGTATCCCATATACT+TGG	0.569026	4.2:+38788756	None:intergenic
CTCCCAGATGGGAAACTAAG+TGG	0.570318	4.2:-38788591	MS.gene28352:CDS
TCTTCTGCATACCAGTATGA+AGG	0.572103	4.2:-38788804	MS.gene28352:CDS
ATTGCTTAATTGAGGTGCAT+CGG	0.574095	4.2:+38787637	None:intergenic
GCAAATGGTGAAATGGCACC+AGG	0.576425	4.2:-38788143	MS.gene28352:CDS
CCATCTTGACTGTAAGTCCA+TGG	0.578921	4.2:+38788170	None:intergenic
GTATCACTCACATGATGAGT+GGG	0.583322	4.2:+38788354	None:intergenic
TCAAGTTTGTTATCTGAGAG+TGG	0.587930	4.2:+38787942	None:intergenic
TGGTTGAATCCAAATTGCAC+CGG	0.588705	4.2:-38788107	MS.gene28352:CDS
GGAAGATGTTGGAATCATGA+AGG	0.590169	4.2:-38788661	MS.gene28352:CDS
GGATAACTTTGAATGAGCCA+TGG	0.594373	4.2:-38788187	MS.gene28352:CDS
AGTGGAGGAATTAATCAAGA+AGG	0.596031	4.2:-38788573	MS.gene28352:CDS
GAAGGTGCAGCAAGTGAAGG+TGG	0.597164	4.2:-38788786	MS.gene28352:CDS
CATGGACTTACAGTCAAGAT+GGG	0.597238	4.2:-38788169	MS.gene28352:CDS
TTTATGGATCCCCTAAGCAA+TGG	0.602529	4.2:-38787788	MS.gene28352:CDS
TATGAAGGTGCAGCAAGTGA+AGG	0.604375	4.2:-38788789	MS.gene28352:CDS
GGTCTAGAATACTCCCAGAT+GGG	0.607544	4.2:-38788602	MS.gene28352:CDS
TGATCCATCATTATCACTTG+AGG	0.609826	4.2:-38787072	MS.gene28352:CDS
TGTATCACTCACATGATGAG+TGG	0.613126	4.2:+38788353	None:intergenic
GGATAATCTCCATTGCTTAG+GGG	0.619619	4.2:+38787779	None:intergenic
ATGTAAAGGGATACTTTGCA+TGG	0.626161	4.2:-38786873	MS.gene28352:CDS
TTCGGTTCCAGAATCACCAC+CGG	0.630837	4.2:+38788088	None:intergenic
GTGATTGCAGTCGAACGTGA+TGG	0.630848	4.2:-38787482	MS.gene28352:intron
GATGCACCTCAATTAAGCAA+TGG	0.647838	4.2:-38787635	MS.gene28352:CDS
AACCAAGATGAACATCGACC+TGG	0.659015	4.2:+38788125	None:intergenic
GGGTGTGATAGGCATAACAT+TGG	0.663042	4.2:-38787982	MS.gene28352:CDS
TTGAATCCAAATTGCACCGG+TGG	0.672179	4.2:-38788104	MS.gene28352:CDS
GAGCAATCAAGGCTAGTGAG+TGG	0.679451	4.2:-38787707	MS.gene28352:CDS
ACTCTAGAAGATGAATATGG+CGG	0.692578	4.2:-38788386	MS.gene28352:CDS
AATCATGAAGGATATGAACA+TGG	0.695127	4.2:-38788649	MS.gene28352:CDS
CCAGATGGGAAACTAAGTGG+AGG	0.696893	4.2:-38788588	MS.gene28352:CDS
TGGTAATCGTGACCTAACCA+AGG	0.710047	4.2:+38787742	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATTATAAATTTAAATTAA+TGG	-	chr4.2:38788142-38788161	MS.gene28352:CDS	0.0%
!!	TTAATTTATATTACTGAAAA+TGG	-	chr4.2:38788403-38788422	MS.gene28352:CDS	10.0%
!!	TTTCAGTAATATAAATTAAA+GGG	+	chr4.2:38788402-38788421	None:intergenic	10.0%
!!!	TTTTCAGTAATATAAATTAA+AGG	+	chr4.2:38788403-38788422	None:intergenic	10.0%
!!	AAATCAGTAATTAATGAATT+TGG	-	chr4.2:38788284-38788303	MS.gene28352:intron	15.0%
!!	ATAATCAATAGATATAAAGT+AGG	+	chr4.2:38788113-38788132	None:intergenic	15.0%
!!	TAACTTAGTTTAAATATTTG+TGG	-	chr4.2:38787354-38787373	MS.gene28352:intron	15.0%
!!	TTTATTTGATTATAGGTTTA+TGG	-	chr4.2:38787861-38787880	MS.gene28352:intron	15.0%
!!!	CTCTTTTTTTATTTGATTAT+AGG	-	chr4.2:38787854-38787873	MS.gene28352:intron	15.0%
!!!	TTTCTTTTAATGTAAATACA+GGG	-	chr4.2:38788760-38788779	MS.gene28352:CDS	15.0%
!!	AGATAACAAACTTGATATAA+AGG	-	chr4.2:38787731-38787750	MS.gene28352:CDS	20.0%
!!	TCATTTATTCTATCTTAATG+AGG	-	chr4.2:38788656-38788675	MS.gene28352:CDS	20.0%
!!!	AATTTGGTTATTTTATTTCC+AGG	-	chr4.2:38788300-38788319	MS.gene28352:intron	20.0%
!!!	ATTTGTAACTCTTTTTCATT+GGG	-	chr4.2:38787245-38787264	MS.gene28352:intron	20.0%
!!!	CTTTCTTTTAATGTAAATAC+AGG	-	chr4.2:38788759-38788778	MS.gene28352:CDS	20.0%
!	AAGTATCAAATCTCTCAAAA+GGG	-	chr4.2:38787663-38787682	MS.gene28352:CDS	25.0%
!	CAATGAAAAAGAGTTACAAA+TGG	+	chr4.2:38787246-38787265	None:intergenic	25.0%
!	TAATCATCCAAATTAACACA+AGG	-	chr4.2:38787808-38787827	MS.gene28352:intron	25.0%
!	TATATCTCCTTGTGTTAATT+TGG	+	chr4.2:38787818-38787837	None:intergenic	25.0%
!	TTCATTATCACTTTAACAGA+CGG	-	chr4.2:38786753-38786772	MS.gene28352:CDS	25.0%
!!	AAAGTATCAAATCTCTCAAA+AGG	-	chr4.2:38787662-38787681	MS.gene28352:CDS	25.0%
!!	CATATAGATTTTCCATTTCT+TGG	-	chr4.2:38787042-38787061	MS.gene28352:CDS	25.0%
!!	TGATAATGTGCAACTAAATA+TGG	+	chr4.2:38787603-38787622	None:intergenic	25.0%
!!!	AACTTTTTCATAATGTGTGT+AGG	-	chr4.2:38788555-38788574	MS.gene28352:CDS	25.0%
!!!	AGTGGTTCATTTGATTTTAT+TGG	-	chr4.2:38787976-38787995	MS.gene28352:CDS	25.0%
!!!	CATTTGTAACTCTTTTTCAT+TGG	-	chr4.2:38787244-38787263	MS.gene28352:intron	25.0%
	AAAAGATATCAAAAGCTCTC+AGG	-	chr4.2:38788896-38788915	MS.gene28352:CDS	30.0%
	AACACTTACATTTAGACCAA+TGG	+	chr4.2:38788214-38788233	None:intergenic	30.0%
	AATCATGAAGGATATGAACA+TGG	-	chr4.2:38787016-38787035	MS.gene28352:CDS	30.0%
	AGATATAAAGTAGGCCAAAT+GGG	+	chr4.2:38788104-38788123	None:intergenic	30.0%
	AGCAAATCACTTTCATATCA+TGG	-	chr4.2:38788428-38788447	MS.gene28352:CDS	30.0%
	AGTTTACAAAAGAGCAATCA+AGG	-	chr4.2:38787947-38787966	MS.gene28352:CDS	30.0%
	ATGTGCAACTAAATATGGTT+CGG	+	chr4.2:38787598-38787617	None:intergenic	30.0%
	CAACAACCTCATTAATGAAT+TGG	-	chr4.2:38787127-38787146	MS.gene28352:intron	30.0%
	GAACTTTGCTTCAAAACATT+TGG	-	chr4.2:38787438-38787457	MS.gene28352:intron	30.0%
	TAGATATAAAGTAGGCCAAA+TGG	+	chr4.2:38788105-38788124	None:intergenic	30.0%
	TATCCTCAAAAAATCAGTGA+TGG	-	chr4.2:38786939-38786958	MS.gene28352:intron	30.0%
	TGCAAATAGGTTCATTGAAT+AGG	-	chr4.2:38786802-38786821	MS.gene28352:CDS	30.0%
	TTCAATGAACCTATTTGCAA+TGG	+	chr4.2:38786801-38786820	None:intergenic	30.0%
	TTGGAGATAGAGTAAAACAT+TGG	-	chr4.2:38787457-38787476	MS.gene28352:intron	30.0%
!	AAAATCAGTGATGGAAACAA+TGG	-	chr4.2:38786948-38786967	MS.gene28352:intron	30.0%
!	ACCTTTGTGGATTACAAAAA+TGG	-	chr4.2:38788869-38788888	MS.gene28352:CDS	30.0%
!	ATTAATGAATTGGTGGCAAA+TGG	-	chr4.2:38787137-38787156	MS.gene28352:intron	30.0%
!	CAAACTCTAGAAGATGAATA+TGG	-	chr4.2:38787276-38787295	MS.gene28352:CDS	30.0%
!	CTTTGTTGGACAATTTTGAA+TGG	-	chr4.2:38788816-38788835	MS.gene28352:CDS	30.0%
!	GATTGCTCTTTTGTAAACTT+TGG	+	chr4.2:38787946-38787965	None:intergenic	30.0%
!	TCAAGAATTTTCTCACATCA+GGG	-	chr4.2:38788927-38788946	MS.gene28352:CDS	30.0%
!	TTCAAGAATTTTCTCACATC+AGG	-	chr4.2:38788926-38788945	MS.gene28352:CDS	30.0%
!	TTTTAATGTAAATACAGGGC+TGG	-	chr4.2:38788764-38788783	MS.gene28352:CDS	30.0%
!!	ACCATTTTTGTAATCCACAA+AGG	+	chr4.2:38788873-38788892	None:intergenic	30.0%
!!	TATTCATCTTCTAGAGTTTG+AGG	+	chr4.2:38787276-38787295	None:intergenic	30.0%
!!!	TTTCCATCACTGATTTTTTG+AGG	+	chr4.2:38786945-38786964	None:intergenic	30.0%
	AAACTGCAGAAAAGATTTCC+AGG	-	chr4.2:38787407-38787426	MS.gene28352:intron	35.0%
	AACGAGAAAGTGAATCTGTT+AGG	+	chr4.2:38788068-38788087	None:intergenic	35.0%
	AAGGGTTATACTGTCAGATT+TGG	-	chr4.2:38788842-38788861	MS.gene28352:CDS	35.0%
	AATAGGAATGATTTCCCAGA+AGG	-	chr4.2:38786819-38786838	MS.gene28352:CDS	35.0%
	AGTGAATCTGTTAGGTAACT+AGG	+	chr4.2:38788060-38788079	None:intergenic	35.0%
	AGTGGAGGAATTAATCAAGA+AGG	-	chr4.2:38787092-38787111	MS.gene28352:intron	35.0%
	ATACTTTGCATGGTCTTTGT+TGG	-	chr4.2:38788802-38788821	MS.gene28352:CDS	35.0%
	ATCACTTGAGGAATCACTTA+TGG	-	chr4.2:38788605-38788624	MS.gene28352:CDS	35.0%
	ATGTAAAGGGATACTTTGCA+TGG	-	chr4.2:38788792-38788811	MS.gene28352:CDS	35.0%
	ATTGCTTAATTGAGGTGCAT+CGG	+	chr4.2:38788031-38788050	None:intergenic	35.0%
	ATTTCCAGGTTGCTTCAAAT+TGG	-	chr4.2:38788314-38788333	MS.gene28352:intron	35.0%
	CAACCTCATTAATGAATTGG+TGG	-	chr4.2:38787130-38787149	MS.gene28352:intron	35.0%
	GAGTATTCTAGACCAAGAAA+TGG	+	chr4.2:38787057-38787076	None:intergenic	35.0%
	GTCTATTTCACTCTCTTTCA+TGG	-	chr4.2:38788717-38788736	MS.gene28352:CDS	35.0%
	TAGACAACAAGAGAGAGAAT+AGG	+	chr4.2:38786722-38786741	None:intergenic	35.0%
	TGATCCATCATTATCACTTG+AGG	-	chr4.2:38788593-38788612	MS.gene28352:CDS	35.0%
	TGGATAATCTCCATTGCTTA+GGG	+	chr4.2:38787890-38787909	None:intergenic	35.0%
	TTGCCACCAATTCATTAATG+AGG	+	chr4.2:38787136-38787155	None:intergenic	35.0%
	TTGGATAATCTCCATTGCTT+AGG	+	chr4.2:38787891-38787910	None:intergenic	35.0%
!	ACTCTAGAAGATGAATATGG+CGG	-	chr4.2:38787279-38787298	MS.gene28352:CDS	35.0%
!	GACAATTTTGAATGGCACAA+GGG	-	chr4.2:38788824-38788843	MS.gene28352:CDS	35.0%
!	GATTCCTCAAGTGATAATGA+TGG	+	chr4.2:38788600-38788619	None:intergenic	35.0%
!	TTTTCATGTAAGCACCCATT+TGG	-	chr4.2:38788087-38788106	MS.gene28352:CDS	35.0%
!!	GTGAAAGTATCCCATATACT+TGG	+	chr4.2:38786912-38786931	None:intergenic	35.0%
!!	TCAAGTTTGTTATCTGAGAG+TGG	+	chr4.2:38787726-38787745	None:intergenic	35.0%
	AACACTGCACCATTGCAAAT+AGG	-	chr4.2:38786789-38786808	MS.gene28352:CDS	40.0%
	AGAAAGTCTCGAATTGCTCT+TGG	+	chr4.2:38788352-38788371	None:intergenic	40.0%
	AGAGCTACAGACTTCATGTT+TGG	-	chr4.2:38787762-38787781	MS.gene28352:CDS	40.0%
	AGTCAAGATGGGTATGCAAA+TGG	-	chr4.2:38787507-38787526	MS.gene28352:intron	40.0%
	ATATAGCCATCTCATGTCAC+AGG	-	chr4.2:38787213-38787232	MS.gene28352:intron	40.0%
	ATCAAAAGCTCTCAGGATTG+TGG	-	chr4.2:38788903-38788922	MS.gene28352:CDS	40.0%
	CATCGCTATAAGGAAGATGT+TGG	-	chr4.2:38786993-38787012	MS.gene28352:intron	40.0%
	CATGGACTTACAGTCAAGAT+GGG	-	chr4.2:38787496-38787515	MS.gene28352:intron	40.0%
	CTACAGACTTCATGTTTGGA+TGG	-	chr4.2:38787766-38787785	MS.gene28352:CDS	40.0%
	GATGCACCTCAATTAAGCAA+TGG	-	chr4.2:38788030-38788049	MS.gene28352:CDS	40.0%
	GGAAGATGTTGGAATCATGA+AGG	-	chr4.2:38787004-38787023	MS.gene28352:CDS	40.0%
	GGATAACTTTGAATGAGCCA+TGG	-	chr4.2:38787478-38787497	MS.gene28352:intron	40.0%
	GGATAATCTCCATTGCTTAG+GGG	+	chr4.2:38787889-38787908	None:intergenic	40.0%
	GGTTTGCCATTGCTTAATTG+AGG	+	chr4.2:38788039-38788058	None:intergenic	40.0%
	GTATCACTCACATGATGAGT+GGG	+	chr4.2:38787314-38787333	None:intergenic	40.0%
	TCTTCTGCATACCAGTATGA+AGG	-	chr4.2:38786861-38786880	MS.gene28352:CDS	40.0%
	TGACTCGTATCATCGCTATA+AGG	-	chr4.2:38786983-38787002	MS.gene28352:intron	40.0%
	TGCCAAATATGAAGCCTTCT+GGG	+	chr4.2:38786836-38786855	None:intergenic	40.0%
	TGGAAGAGGACCAAGTATAT+GGG	-	chr4.2:38786899-38786918	MS.gene28352:intron	40.0%
	TGGGTATGCAAATGGTGAAA+TGG	-	chr4.2:38787515-38787534	MS.gene28352:intron	40.0%
	TGGTTGAATCCAAATTGCAC+CGG	-	chr4.2:38787558-38787577	MS.gene28352:intron	40.0%
	TGTAAACCTGTGACATGAGA+TGG	+	chr4.2:38787222-38787241	None:intergenic	40.0%
	TGTATCACTCACATGATGAG+TGG	+	chr4.2:38787315-38787334	None:intergenic	40.0%
	TTCCCAGAAGGCTTCATATT+TGG	-	chr4.2:38786831-38786850	MS.gene28352:CDS	40.0%
	TTTATGGATCCCCTAAGCAA+TGG	-	chr4.2:38787877-38787896	MS.gene28352:intron	40.0%
!	ACAACCAATTTGAAGCAACC+TGG	+	chr4.2:38788321-38788340	None:intergenic	40.0%
!	AGGGCTGGTGTAAATGTAAA+GGG	-	chr4.2:38788779-38788798	MS.gene28352:CDS	40.0%
!	ATCTCTCAAAAGGGTGTGAT+AGG	-	chr4.2:38787672-38787691	MS.gene28352:CDS	40.0%
!	CAGATTTGGAATGACCTTTG+TGG	-	chr4.2:38788856-38788875	MS.gene28352:CDS	40.0%
!	GAACGTGATGGAAAAACCAT+TGG	-	chr4.2:38788195-38788214	MS.gene28352:CDS	40.0%
!	GGACAATTTTGAATGGCACA+AGG	-	chr4.2:38788823-38788842	MS.gene28352:CDS	40.0%
	AAAACATGCGAGCCTTGGTT+AGG	-	chr4.2:38787911-38787930	MS.gene28352:CDS	45.0%
	AACCAAGATGAACATCGACC+TGG	+	chr4.2:38787543-38787562	None:intergenic	45.0%
	AGCAAAGTTCTGCATAGTCC+TGG	+	chr4.2:38787428-38787447	None:intergenic	45.0%
	CCATCTTGACTGTAAGTCCA+TGG	+	chr4.2:38787498-38787517	None:intergenic	45.0%
	CCATGGACTTACAGTCAAGA+TGG	-	chr4.2:38787495-38787514	MS.gene28352:intron	45.0%
	CTCCACTTAGTTTCCCATCT+GGG	+	chr4.2:38787079-38787098	None:intergenic	45.0%
	GGGTGTGATAGGCATAACAT+TGG	-	chr4.2:38787683-38787702	MS.gene28352:CDS	45.0%
	GTGCCAAATATGAAGCCTTC+TGG	+	chr4.2:38786837-38786856	None:intergenic	45.0%
	GTGGAAGAGGACCAAGTATA+TGG	-	chr4.2:38786898-38786917	MS.gene28352:intron	45.0%
	TCCAAAAAACATGCGAGCCT+TGG	-	chr4.2:38787906-38787925	MS.gene28352:CDS	45.0%
	TGGTAATCGTGACCTAACCA+AGG	+	chr4.2:38787926-38787945	None:intergenic	45.0%
	TTGAATCCAAATTGCACCGG+TGG	-	chr4.2:38787561-38787580	MS.gene28352:intron	45.0%
!	CAGGGCTGGTGTAAATGTAA+AGG	-	chr4.2:38788778-38788797	MS.gene28352:CDS	45.0%
!	GGTCTAGAATACTCCCAGAT+GGG	-	chr4.2:38787063-38787082	MS.gene28352:CDS	45.0%
!	TATGAAGGTGCAGCAAGTGA+AGG	-	chr4.2:38786876-38786895	MS.gene28352:CDS	45.0%
!	TGGTCTAGAATACTCCCAGA+TGG	-	chr4.2:38787062-38787081	MS.gene28352:CDS	45.0%
!!!	ACCAAGGCTCGCATGTTTTT+TGG	+	chr4.2:38787910-38787929	None:intergenic	45.0%
	CACCAGGTCGATGTTCATCT+TGG	-	chr4.2:38787538-38787557	MS.gene28352:intron	50.0%
	CCAGATGGGAAACTAAGTGG+AGG	-	chr4.2:38787077-38787096	MS.gene28352:CDS	50.0%
	CCTCCACTTAGTTTCCCATC+TGG	+	chr4.2:38787080-38787099	None:intergenic	50.0%
	CTCCCAGATGGGAAACTAAG+TGG	-	chr4.2:38787074-38787093	MS.gene28352:CDS	50.0%
	GAATCACCACCGGTGCAATT+TGG	+	chr4.2:38787570-38787589	None:intergenic	50.0%
	GAGCAATCAAGGCTAGTGAG+TGG	-	chr4.2:38787958-38787977	MS.gene28352:CDS	50.0%
	GCAAATGGTGAAATGGCACC+AGG	-	chr4.2:38787522-38787541	MS.gene28352:intron	50.0%
	GTGATTGCAGTCGAACGTGA+TGG	-	chr4.2:38788183-38788202	MS.gene28352:CDS	50.0%
	TTCGGTTCCAGAATCACCAC+CGG	+	chr4.2:38787580-38787599	None:intergenic	50.0%
!	AATTGCACCGGTGGTGATTC+TGG	-	chr4.2:38787570-38787589	MS.gene28352:intron	50.0%
!	CACTTGCTGCACCTTCATAC+TGG	+	chr4.2:38786875-38786894	None:intergenic	50.0%
	GCAGCAAGTGAAGGTGGAAG+AGG	-	chr4.2:38786885-38786904	MS.gene28352:CDS	55.0%
!	GAAGGTGCAGCAAGTGAAGG+TGG	-	chr4.2:38786879-38786898	MS.gene28352:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	38786708	38788979	38786708	ID=MS.gene28352
chr4.2	mRNA	38786708	38788979	38786708	ID=MS.gene28352.t1;Parent=MS.gene28352
chr4.2	exon	38788529	38788979	38788529	ID=MS.gene28352.t1.exon1;Parent=MS.gene28352.t1
chr4.2	CDS	38788529	38788979	38788529	ID=cds.MS.gene28352.t1;Parent=MS.gene28352.t1
chr4.2	exon	38788365	38788452	38788365	ID=MS.gene28352.t1.exon2;Parent=MS.gene28352.t1
chr4.2	CDS	38788365	38788452	38788365	ID=cds.MS.gene28352.t1;Parent=MS.gene28352.t1
chr4.2	exon	38787900	38788271	38787900	ID=MS.gene28352.t1.exon3;Parent=MS.gene28352.t1
chr4.2	CDS	38787900	38788271	38787900	ID=cds.MS.gene28352.t1;Parent=MS.gene28352.t1
chr4.2	exon	38787594	38787811	38787594	ID=MS.gene28352.t1.exon4;Parent=MS.gene28352.t1
chr4.2	CDS	38787594	38787811	38787594	ID=cds.MS.gene28352.t1;Parent=MS.gene28352.t1
chr4.2	exon	38787463	38787494	38787463	ID=MS.gene28352.t1.exon5;Parent=MS.gene28352.t1
chr4.2	CDS	38787463	38787494	38787463	ID=cds.MS.gene28352.t1;Parent=MS.gene28352.t1
chr4.2	exon	38787263	38787365	38787263	ID=MS.gene28352.t1.exon6;Parent=MS.gene28352.t1
chr4.2	CDS	38787263	38787365	38787263	ID=cds.MS.gene28352.t1;Parent=MS.gene28352.t1
chr4.2	exon	38787002	38787110	38787002	ID=MS.gene28352.t1.exon7;Parent=MS.gene28352.t1
chr4.2	CDS	38787002	38787110	38787002	ID=cds.MS.gene28352.t1;Parent=MS.gene28352.t1
chr4.2	exon	38786708	38786906	38786708	ID=MS.gene28352.t1.exon8;Parent=MS.gene28352.t1
chr4.2	CDS	38786708	38786906	38786708	ID=cds.MS.gene28352.t1;Parent=MS.gene28352.t1

Gene Sequence

>MS.gene28352

ATGAGATATTTCCTATTCTCTCTCTTGTTGTCTATAGTTTCAAAATTCATTATCACTTTAACAGACGGTAAAGAAATAATTAACACTGCACCATTGCAAATAGGTTCATTGAATAGGAATGATTTCCCAGAAGGCTTCATATTTGGCACAGCATCTTCTGCATACCAGTATGAAGGTGCAGCAAGTGAAGGTGGAAGAGGACCAAGTATATGGGATACTTTCACTCATAGATATCCTCAAAAAATCAGTGATGGAAACAATGGAGACGTTGCAGTTGACTCGTATCATCGCTATAAGGAAGATGTTGGAATCATGAAGGATATGAACATGGATGCATATAGATTTTCCATTTCTTGGTCTAGAATACTCCCAGATGGGAAACTAAGTGGAGGAATTAATCAAGAAGGAATCGACTATTACAACAACCTCATTAATGAATTGGTGGCAAATGGTAAGAATACAAACTTCATTTTCATTTATGCTAATTGCATTTTAGCATATTCTAATATAGCCATCTCATGTCACAGGTTTACAACCATTTGTAACTCTTTTTCATTGGGATCTTCCTCAAACTCTAGAAGATGAATATGGCGGTTTCTTAAGCCCACTCATCATGTGAGTGATACAATTTCAAACTTTCAGTTAATAACTTAGTTTAAATATTTGTGGAAATGTTTCTCATTCATCTTCACATACTTTAAACTGCAGAAAAGATTTCCAGGACTATGCAGAACTTTGCTTCAAAACATTTGGAGATAGAGTAAAACATTGGATAACTTTGAATGAGCCATGGACTTACAGTCAAGATGGGTATGCAAATGGTGAAATGGCACCAGGTCGATGTTCATCTTGGTTGAATCCAAATTGCACCGGTGGTGATTCTGGAACCGAACCATATTTAGTTGCACATTATCAACTTCTAGCTCATGCAGCAGTTGTTAATTTATACAAGACAAAGTATCAAATCTCTCAAAAGGGTGTGATAGGCATAACATTGGTTATTAACTATTTTGTGCCACTCTCAGATAACAAACTTGATATAAAGGCTGCTGAAAGAGCTACAGACTTCATGTTTGGATGGTAAGTTGATTACAAAGATATAATCATCCAAATTAACACAAGGAGATATATATATGATAACTTATTCTCTTTTTTTATTTGATTATAGGTTTATGGATCCCCTAAGCAATGGAGATTATCCAAAAAACATGCGAGCCTTGGTTAGGTCACGATTACCAAAGTTTACAAAAGAGCAATCAAGGCTAGTGAGTGGTTCATTTGATTTTATTGGCATAAATTACTACTCTTCTTGCTATGCTTCCGATGCACCTCAATTAAGCAATGGCAAACCTAGTTACCTAACAGATTCACTTTCTCGTTTTTCATGTAAGCACCCATTTGGCCTACTTTATATCTATTGATTATTTAAGTTATATATTATAAATTTAAATTAATGGTGTGCATTTTTTGTGTGTGTGATTGCAGTCGAACGTGATGGAAAAACCATTGGTCTAAATGTAAGTGTTAAATTAAACATGAAATGTTGCAATATCTCATCTGTTATTTTGTTTTGTCTAAATCAGTAATTAATGAATTTGGTTATTTTATTTCCAGGTTGCTTCAAATTGGTTGTATGTTTATCCAAGAGCAATTCGAGACTTTCTGATACAAGTTAAAGAAAAATACAACAACCCTTTAATTTATATTACTGAAAATGGTAAGCAAATCACTTTCATATCATGGTTTTTCTTCTTTAAATAGATAAAGTTATAGTTAAAAACTATTTAATTTAGATAATATAAATTTCTATATGAGATTTTTTATTTTATTACGCATGAATATAACTCAACTTTTTCATAATGTGTGTAGGTATTAATGAGTACGATGATCCATCATTATCACTTGAGGAATCACTTATGGATACTTATAGAGTTGATTATCATTATCGTCATTTATTCTATCTTAATGAGGCAATCAAGTGAGTAAATTTTTGATATATCTAAAGATCAGTCTATTTCACTCTCTTTCATGGAATTTAGCTAAACTATTTTCTTTCTTTTAATGTAAATACAGGGCTGGTGTAAATGTAAAGGGATACTTTGCATGGTCTTTGTTGGACAATTTTGAATGGCACAAGGGTTATACTGTCAGATTTGGAATGACCTTTGTGGATTACAAAAATGGTTTGAAAAGATATCAAAAGCTCTCAGGATTGTGGTTCAAGAATTTTCTCACATCAGGGAACAAAAAAGTTTACATAGATTCCATTTAA

Protein sequence

>MS.gene28352.t1

MRYFLFSLLLSIVSKFIITLTDGKEIINTAPLQIGSLNRNDFPEGFIFGTASSAYQYEGAASEGGRGPSIWDTFTHRYPQKISDGNNGDVAVDSYHRYKEDVGIMKDMNMDAYRFSISWSRILPDGKLSGGINQEGIDYYNNLINELVANGLQPFVTLFHWDLPQTLEDEYGGFLSPLIIKDFQDYAELCFKTFGDRVKHWITLNEPWTYSQDGYANGEMAPGRCSSWLNPNCTGGDSGTEPYLVAHYQLLAHAAVVNLYKTKYQISQKGVIGITLVINYFVPLSDNKLDIKAAERATDFMFGWFMDPLSNGDYPKNMRALVRSRLPKFTKEQSRLVSGSFDFIGINYYSSCYASDAPQLSNGKPSYLTDSLSRFSFERDGKTIGLNVASNWLYVYPRAIRDFLIQVKEKYNNPLIYITENGINEYDDPSLSLEESLMDTYRVDYHYRHLFYLNEAIKAGVNVKGYFAWSLLDNFEWHKGYTVRFGMTFVDYKNGLKRYQKLSGLWFKNFLTSGNKKVYIDSI