Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36124.t1 | XP_013445151.1 | 98 | 252 | 5 | 0 | 1 | 252 | 1 | 252 | 2.30E-135 | 491.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36124.t1 | Q9LTV6 | 81.0 | 248 | 46 | 1 | 6 | 252 | 2 | 249 | 5.7e-114 | 411.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36124.t1 | A0A072TP38 | 98.0 | 252 | 5 | 0 | 1 | 252 | 1 | 252 | 1.7e-135 | 491.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene36124 | 0.821012 | 5.06E-53 | -1.69E-46 |
| MS.gene04917 | MS.gene36124 | 0.820502 | 6.63E-53 | -1.69E-46 |
| MS.gene04984 | MS.gene36124 | 0.804607 | 1.99E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene36124 | 0.803639 | 3.17E-49 | -1.69E-46 |
| MS.gene051184 | MS.gene36124 | 0.815423 | 9.31E-52 | -1.69E-46 |
| MS.gene051757 | MS.gene36124 | 0.803491 | 3.40E-49 | -1.69E-46 |
| MS.gene051987 | MS.gene36124 | 0.812281 | 4.59E-51 | -1.69E-46 |
| MS.gene052242 | MS.gene36124 | -0.819806 | 9.57E-53 | -1.69E-46 |
| MS.gene05344 | MS.gene36124 | -0.801979 | 6.97E-49 | -1.69E-46 |
| MS.gene055441 | MS.gene36124 | 0.810463 | 1.14E-50 | -1.69E-46 |
| MS.gene056464 | MS.gene36124 | -0.808483 | 3.03E-50 | -1.69E-46 |
| MS.gene056787 | MS.gene36124 | 0.803459 | 3.45E-49 | -1.69E-46 |
| MS.gene056849 | MS.gene36124 | 0.838201 | 3.31E-57 | -1.69E-46 |
| MS.gene056975 | MS.gene36124 | 0.804411 | 2.19E-49 | -1.69E-46 |
| MS.gene057451 | MS.gene36124 | -0.811518 | 6.73E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene36124 | -0.830513 | 2.81E-55 | -1.69E-46 |
| MS.gene058054 | MS.gene36124 | 0.81848 | 1.92E-52 | -1.69E-46 |
| MS.gene058055 | MS.gene36124 | 0.807618 | 4.63E-50 | -1.69E-46 |
| MS.gene058278 | MS.gene36124 | 0.805992 | 1.02E-49 | -1.69E-46 |
| MS.gene059050 | MS.gene36124 | 0.801827 | 7.49E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene36124 | 0.819683 | 1.02E-52 | -1.69E-46 |
| MS.gene060297 | MS.gene36124 | 0.804424 | 2.17E-49 | -1.69E-46 |
| MS.gene060563 | MS.gene36124 | 0.808739 | 2.67E-50 | -1.69E-46 |
| MS.gene060869 | MS.gene36124 | 0.802654 | 5.06E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene058335 | MS.gene36124 | PPI |
| MS.gene67886 | MS.gene36124 | PPI |
| MS.gene55898 | MS.gene36124 | PPI |
| MS.gene00059 | MS.gene36124 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36124.t1 | MTR_8g442750 | 98.016 | 252 | 5 | 0 | 1 | 252 | 1 | 252 | 0.0 | 504 |
| MS.gene36124.t1 | MTR_7g113650 | 30.859 | 256 | 145 | 9 | 9 | 249 | 34 | 272 | 2.87e-24 | 98.6 |
| MS.gene36124.t1 | MTR_1g082760 | 30.400 | 250 | 154 | 7 | 9 | 249 | 34 | 272 | 2.65e-23 | 96.3 |
| MS.gene36124.t1 | MTR_4g131740 | 33.061 | 245 | 142 | 9 | 14 | 248 | 40 | 272 | 3.08e-23 | 95.9 |
| MS.gene36124.t1 | MTR_4g064887 | 30.417 | 240 | 148 | 6 | 14 | 247 | 15 | 241 | 6.75e-22 | 91.7 |
| MS.gene36124.t1 | MTR_7g063270 | 28.862 | 246 | 147 | 7 | 14 | 247 | 16 | 245 | 7.68e-21 | 89.0 |
| MS.gene36124.t1 | MTR_7g063260 | 28.049 | 246 | 150 | 6 | 14 | 247 | 16 | 246 | 1.31e-19 | 85.5 |
| MS.gene36124.t1 | MTR_4g064887 | 33.333 | 213 | 118 | 8 | 14 | 220 | 15 | 209 | 3.01e-19 | 84.0 |
| MS.gene36124.t1 | MTR_4g064883 | 28.511 | 235 | 159 | 4 | 14 | 247 | 14 | 240 | 9.05e-19 | 83.2 |
| MS.gene36124.t1 | MTR_8g096620 | 31.390 | 223 | 137 | 6 | 9 | 227 | 40 | 250 | 5.79e-18 | 82.4 |
| MS.gene36124.t1 | MTR_7g063390 | 28.708 | 209 | 138 | 4 | 1 | 206 | 1 | 201 | 6.27e-18 | 80.9 |
| MS.gene36124.t1 | MTR_3g068065 | 26.749 | 243 | 153 | 9 | 14 | 247 | 17 | 243 | 1.23e-17 | 80.5 |
| MS.gene36124.t1 | MTR_8g096580 | 32.843 | 204 | 112 | 7 | 12 | 206 | 43 | 230 | 2.08e-17 | 80.5 |
| MS.gene36124.t1 | MTR_3g085740 | 28.455 | 246 | 162 | 5 | 3 | 247 | 67 | 299 | 5.13e-17 | 79.3 |
| MS.gene36124.t1 | MTR_3g068070 | 26.050 | 238 | 161 | 6 | 14 | 247 | 15 | 241 | 7.64e-17 | 78.2 |
| MS.gene36124.t1 | MTR_7g063320 | 26.860 | 242 | 158 | 5 | 14 | 247 | 15 | 245 | 8.85e-17 | 77.8 |
| MS.gene36124.t1 | MTR_4g064883 | 30.928 | 194 | 125 | 4 | 14 | 206 | 14 | 199 | 1.64e-16 | 76.3 |
| MS.gene36124.t1 | MTR_4g132850 | 30.453 | 243 | 151 | 5 | 11 | 249 | 4 | 232 | 1.70e-16 | 77.0 |
| MS.gene36124.t1 | MTR_3g068175 | 28.099 | 242 | 151 | 8 | 14 | 247 | 17 | 243 | 2.76e-16 | 76.6 |
| MS.gene36124.t1 | MTR_7g063360 | 28.230 | 209 | 139 | 4 | 1 | 206 | 1 | 201 | 4.78e-16 | 75.9 |
| MS.gene36124.t1 | MTR_7g105590 | 31.472 | 197 | 121 | 5 | 14 | 207 | 8 | 193 | 5.47e-16 | 74.3 |
| MS.gene36124.t1 | MTR_1196s0010 | 30.043 | 233 | 151 | 5 | 17 | 249 | 277 | 497 | 7.26e-16 | 77.0 |
| MS.gene36124.t1 | MTR_3g068155 | 27.642 | 246 | 147 | 8 | 14 | 247 | 19 | 245 | 7.58e-16 | 75.5 |
| MS.gene36124.t1 | MTR_3g068085 | 26.050 | 238 | 161 | 6 | 14 | 247 | 15 | 241 | 1.10e-15 | 75.1 |
| MS.gene36124.t1 | MTR_7g063330 | 26.360 | 239 | 162 | 5 | 14 | 247 | 15 | 244 | 1.16e-15 | 74.7 |
| MS.gene36124.t1 | MTR_7g071680 | 28.623 | 276 | 156 | 9 | 4 | 252 | 19 | 280 | 1.27e-15 | 75.1 |
| MS.gene36124.t1 | MTR_4g052350 | 30.522 | 249 | 145 | 9 | 14 | 252 | 14 | 244 | 1.45e-15 | 74.7 |
| MS.gene36124.t1 | MTR_4g052300 | 30.159 | 252 | 142 | 9 | 14 | 252 | 8 | 238 | 2.20e-15 | 73.9 |
| MS.gene36124.t1 | MTR_4g052320 | 30.800 | 250 | 144 | 8 | 14 | 252 | 8 | 239 | 3.09e-15 | 73.6 |
| MS.gene36124.t1 | MTR_7g094510 | 29.435 | 248 | 154 | 9 | 14 | 252 | 6 | 241 | 3.62e-15 | 73.2 |
| MS.gene36124.t1 | MTR_3g068175 | 27.686 | 242 | 156 | 8 | 14 | 247 | 17 | 247 | 1.05e-14 | 72.4 |
| MS.gene36124.t1 | MTR_4g052340 | 30.522 | 249 | 145 | 9 | 14 | 252 | 14 | 244 | 1.31e-14 | 72.0 |
| MS.gene36124.t1 | MTR_7g105580 | 30.364 | 247 | 133 | 10 | 14 | 252 | 8 | 223 | 9.42e-14 | 69.3 |
| MS.gene36124.t1 | MTR_1g068955 | 30.769 | 260 | 162 | 8 | 1 | 252 | 1 | 250 | 9.82e-14 | 69.7 |
| MS.gene36124.t1 | MTR_4g058810 | 29.825 | 228 | 145 | 7 | 14 | 234 | 11 | 230 | 4.14e-13 | 67.8 |
| MS.gene36124.t1 | MTR_1g051165 | 30.516 | 213 | 125 | 9 | 6 | 204 | 5 | 208 | 1.42e-12 | 66.2 |
| MS.gene36124.t1 | MTR_3g098470 | 29.932 | 147 | 96 | 2 | 15 | 161 | 33 | 172 | 1.57e-12 | 66.6 |
| MS.gene36124.t1 | MTR_4g078630 | 29.478 | 268 | 152 | 10 | 1 | 249 | 5 | 254 | 1.75e-12 | 66.2 |
| MS.gene36124.t1 | MTR_8g096060 | 31.293 | 147 | 91 | 3 | 15 | 161 | 35 | 171 | 1.35e-11 | 63.5 |
| MS.gene36124.t1 | MTR_1g031180 | 28.571 | 147 | 98 | 2 | 15 | 161 | 38 | 177 | 2.59e-11 | 62.8 |
| MS.gene36124.t1 | MTR_6g035395 | 29.675 | 246 | 135 | 11 | 14 | 249 | 5 | 222 | 4.71e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36124.t1 | AT3G12800 | 80.645 | 248 | 47 | 1 | 6 | 252 | 2 | 249 | 3.83e-133 | 377 |
| MS.gene36124.t1 | AT2G07640 | 78.049 | 123 | 26 | 1 | 131 | 252 | 1 | 123 | 1.98e-57 | 180 |
| MS.gene36124.t1 | AT3G05260 | 32.016 | 253 | 153 | 6 | 5 | 249 | 27 | 268 | 1.09e-27 | 107 |
| MS.gene36124.t1 | AT1G54870 | 31.967 | 244 | 147 | 6 | 14 | 249 | 84 | 316 | 4.17e-27 | 107 |
| MS.gene36124.t1 | AT1G54870 | 31.967 | 244 | 147 | 6 | 14 | 249 | 82 | 314 | 4.21e-27 | 107 |
| MS.gene36124.t1 | AT1G63380 | 34.673 | 199 | 114 | 7 | 14 | 204 | 15 | 205 | 1.36e-21 | 91.3 |
| MS.gene36124.t1 | AT1G63380 | 34.673 | 199 | 114 | 7 | 14 | 204 | 22 | 212 | 1.52e-21 | 91.3 |
| MS.gene36124.t1 | AT1G63380 | 34.673 | 199 | 114 | 7 | 14 | 204 | 19 | 209 | 1.75e-21 | 91.3 |
| MS.gene36124.t1 | AT1G63380 | 34.673 | 199 | 114 | 7 | 14 | 204 | 17 | 207 | 1.88e-21 | 90.9 |
| MS.gene36124.t1 | AT5G50600 | 32.995 | 197 | 120 | 4 | 12 | 206 | 43 | 229 | 5.02e-21 | 90.9 |
| MS.gene36124.t1 | AT5G50700 | 32.995 | 197 | 120 | 4 | 12 | 206 | 43 | 229 | 5.02e-21 | 90.9 |
| MS.gene36124.t1 | AT2G17845 | 32.937 | 252 | 146 | 10 | 14 | 252 | 47 | 288 | 8.68e-21 | 89.7 |
| MS.gene36124.t1 | AT1G62610 | 34.171 | 199 | 115 | 7 | 14 | 204 | 14 | 204 | 1.07e-19 | 86.3 |
| MS.gene36124.t1 | AT1G62610 | 34.171 | 199 | 115 | 7 | 14 | 204 | 13 | 203 | 1.11e-19 | 85.9 |
| MS.gene36124.t1 | AT1G62610 | 34.171 | 199 | 115 | 7 | 14 | 204 | 15 | 205 | 1.14e-19 | 85.9 |
| MS.gene36124.t1 | AT1G62610 | 34.171 | 199 | 115 | 7 | 14 | 204 | 19 | 209 | 1.37e-19 | 85.9 |
| MS.gene36124.t1 | AT1G52340 | 31.746 | 252 | 145 | 9 | 14 | 249 | 18 | 258 | 5.15e-18 | 81.6 |
| MS.gene36124.t1 | AT4G05530 | 30.041 | 243 | 152 | 4 | 11 | 249 | 6 | 234 | 6.46e-18 | 80.9 |
| MS.gene36124.t1 | AT2G29260 | 28.692 | 237 | 156 | 5 | 14 | 247 | 68 | 294 | 1.07e-17 | 81.3 |
| MS.gene36124.t1 | AT5G18210 | 30.469 | 256 | 144 | 9 | 14 | 252 | 8 | 246 | 3.01e-17 | 79.0 |
| MS.gene36124.t1 | AT5G18210 | 30.588 | 255 | 143 | 9 | 14 | 251 | 8 | 245 | 4.58e-17 | 79.0 |
| MS.gene36124.t1 | AT3G55310 | 31.496 | 254 | 144 | 11 | 14 | 252 | 17 | 255 | 5.80e-17 | 78.6 |
| MS.gene36124.t1 | AT2G29150 | 26.891 | 238 | 158 | 7 | 14 | 247 | 16 | 241 | 6.39e-17 | 78.2 |
| MS.gene36124.t1 | AT3G55290 | 35.294 | 204 | 105 | 9 | 14 | 204 | 17 | 206 | 6.74e-17 | 78.6 |
| MS.gene36124.t1 | AT3G55290 | 35.294 | 204 | 105 | 9 | 14 | 204 | 18 | 207 | 7.32e-17 | 78.6 |
| MS.gene36124.t1 | AT5G06060 | 26.891 | 238 | 159 | 5 | 14 | 247 | 9 | 235 | 1.45e-16 | 77.4 |
| MS.gene36124.t1 | AT2G29290 | 28.452 | 239 | 154 | 8 | 14 | 247 | 7 | 233 | 3.03e-16 | 76.3 |
| MS.gene36124.t1 | AT3G04000 | 29.213 | 267 | 164 | 8 | 1 | 252 | 1 | 257 | 6.15e-16 | 75.9 |
| MS.gene36124.t1 | AT3G47350 | 32.338 | 201 | 118 | 6 | 12 | 207 | 42 | 229 | 6.62e-16 | 76.3 |
| MS.gene36124.t1 | AT3G46170 | 31.496 | 254 | 144 | 11 | 14 | 252 | 26 | 264 | 6.64e-16 | 75.9 |
| MS.gene36124.t1 | AT3G47350 | 32.338 | 201 | 118 | 6 | 12 | 207 | 42 | 229 | 7.44e-16 | 76.3 |
| MS.gene36124.t1 | AT5G50770 | 34.518 | 197 | 113 | 5 | 12 | 204 | 43 | 227 | 1.79e-15 | 75.1 |
| MS.gene36124.t1 | AT2G29350 | 25.941 | 239 | 159 | 6 | 14 | 247 | 15 | 240 | 2.08e-15 | 74.3 |
| MS.gene36124.t1 | AT2G29370 | 25.523 | 239 | 161 | 5 | 14 | 247 | 16 | 242 | 2.77e-15 | 73.9 |
| MS.gene36124.t1 | AT4G13180 | 28.340 | 247 | 158 | 9 | 14 | 252 | 13 | 248 | 5.55e-15 | 72.8 |
| MS.gene36124.t1 | AT3G47360 | 29.534 | 193 | 124 | 5 | 17 | 207 | 48 | 230 | 1.03e-14 | 72.8 |
| MS.gene36124.t1 | AT3G26770 | 27.490 | 251 | 158 | 9 | 14 | 252 | 41 | 279 | 3.82e-14 | 71.2 |
| MS.gene36124.t1 | AT4G10020 | 28.283 | 198 | 124 | 5 | 7 | 198 | 40 | 225 | 8.86e-14 | 70.5 |
| MS.gene36124.t1 | AT3G51680 | 30.292 | 274 | 158 | 11 | 1 | 252 | 19 | 281 | 8.96e-14 | 70.1 |
| MS.gene36124.t1 | AT1G24360 | 27.823 | 248 | 159 | 5 | 1 | 247 | 70 | 298 | 1.08e-13 | 70.1 |
| MS.gene36124.t1 | AT4G03140 | 30.556 | 252 | 148 | 8 | 14 | 252 | 78 | 315 | 4.08e-13 | 68.6 |
| MS.gene36124.t1 | AT2G29310 | 27.984 | 243 | 150 | 10 | 14 | 247 | 7 | 233 | 7.94e-13 | 67.0 |
| MS.gene36124.t1 | AT2G29320 | 25.833 | 240 | 160 | 6 | 14 | 247 | 13 | 240 | 2.77e-12 | 65.5 |
| MS.gene36124.t1 | AT2G47140 | 29.218 | 243 | 153 | 9 | 14 | 249 | 6 | 236 | 4.51e-12 | 64.7 |
| MS.gene36124.t1 | AT3G47350 | 36.893 | 103 | 64 | 1 | 12 | 113 | 42 | 144 | 4.51e-12 | 64.7 |
| MS.gene36124.t1 | AT2G29330 | 29.218 | 243 | 147 | 9 | 14 | 247 | 7 | 233 | 1.58e-11 | 63.2 |
| MS.gene36124.t1 | AT2G47130 | 28.629 | 248 | 147 | 10 | 14 | 249 | 6 | 235 | 2.10e-11 | 62.8 |
| MS.gene36124.t1 | AT5G50690 | 29.146 | 199 | 129 | 5 | 12 | 208 | 43 | 231 | 2.59e-11 | 62.8 |
| MS.gene36124.t1 | AT5G50590 | 29.146 | 199 | 129 | 5 | 12 | 208 | 43 | 231 | 2.59e-11 | 62.8 |
| MS.gene36124.t1 | AT5G50690 | 33.333 | 132 | 86 | 2 | 12 | 141 | 43 | 174 | 3.28e-11 | 62.0 |
| MS.gene36124.t1 | AT5G50590 | 33.333 | 132 | 86 | 2 | 12 | 141 | 43 | 174 | 3.28e-11 | 62.0 |
| MS.gene36124.t1 | AT2G47120 | 27.778 | 252 | 143 | 10 | 14 | 249 | 6 | 234 | 5.26e-11 | 61.6 |
| MS.gene36124.t1 | AT2G47120 | 27.778 | 252 | 143 | 10 | 14 | 249 | 7 | 235 | 5.36e-11 | 61.6 |
| MS.gene36124.t1 | AT1G07450 | 27.004 | 237 | 159 | 9 | 14 | 247 | 8 | 233 | 5.84e-11 | 61.6 |
| MS.gene36124.t1 | AT3G29250 | 28.571 | 252 | 147 | 10 | 12 | 249 | 42 | 274 | 6.87e-11 | 61.6 |
| MS.gene36124.t1 | AT2G29300 | 25.311 | 241 | 160 | 7 | 14 | 247 | 7 | 234 | 8.90e-11 | 60.8 |
| MS.gene36124.t1 | AT3G29250 | 28.800 | 250 | 145 | 10 | 14 | 249 | 6 | 236 | 9.56e-11 | 60.8 |
Find 69 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTTTCGATTCCTGCTGTT+GGG | 0.266199 | 8.3:+52210789 | MS.gene36124:CDS |
| ATGCCAGGAGTGTCACTTAT+TGG | 0.283238 | 8.3:-52212897 | None:intergenic |
| ATTAGTGCTACGTTGCATTA+TGG | 0.284018 | 8.3:+52212535 | MS.gene36124:CDS |
| TTCAAACCAGAAATCTTAAA+AGG | 0.319717 | 8.3:+52210629 | MS.gene36124:CDS |
| ACTGGCGGAGCGTCGGGAAT+TGG | 0.320337 | 8.3:+52210668 | MS.gene36124:CDS |
| CGTTGCATTATGGAGCTTCT+TGG | 0.328944 | 8.3:+52212545 | MS.gene36124:CDS |
| GGCAAAGTAGCTTTAATAAC+TGG | 0.335212 | 8.3:+52210650 | MS.gene36124:CDS |
| TGTATAAACTCGGGGAGAAA+TGG | 0.339818 | 8.3:+52212973 | MS.gene36124:CDS |
| CCTCTGCTACCTATTTCTTC+AGG | 0.344151 | 8.3:-52212933 | None:intergenic |
| AAGAAACTTGGCACTGGAAT+GGG | 0.348357 | 8.3:+52212833 | MS.gene36124:CDS |
| ATTCCTGCTGTTGGGTTTGA+AGG | 0.357334 | 8.3:+52210797 | MS.gene36124:CDS |
| GTTTGAAATATCAACGCAAT+TGG | 0.363203 | 8.3:+52210691 | MS.gene36124:CDS |
| TTAATAACTGGCGGAGCGTC+GGG | 0.374098 | 8.3:+52210662 | MS.gene36124:CDS |
| AGTTCTTCAATCTGCTGTTT+CGG | 0.377117 | 8.3:+52210757 | MS.gene36124:CDS |
| TTTGAAATATCAACGCAATT+GGG | 0.380854 | 8.3:+52210692 | MS.gene36124:CDS |
| TCGCTTTCGATTCCTGCTGT+TGG | 0.383020 | 8.3:+52210788 | MS.gene36124:CDS |
| CTGGCGGAGCGTCGGGAATT+GGG | 0.395868 | 8.3:+52210669 | MS.gene36124:CDS |
| GATTATGATATTCGAGTCAA+TGG | 0.397358 | 8.3:+52212861 | MS.gene36124:CDS |
| CTGAAGATCTTTCGCCGAAT+GGG | 0.404176 | 8.3:+52210930 | MS.gene36124:CDS |
| TTTAAGATTTCTGGTTTGAA+TGG | 0.409904 | 8.3:-52210626 | None:intergenic |
| CACTCCTGGCATGAGTAAAC+TGG | 0.411577 | 8.3:+52212908 | MS.gene36124:CDS |
| AAACTGGCTCCTGAAGAAAT+AGG | 0.417404 | 8.3:+52212924 | MS.gene36124:CDS |
| TCGCCGAATGGGTTTCGAAC+AGG | 0.420284 | 8.3:+52210941 | MS.gene36124:CDS |
| GTATAAACTCGGGGAGAAAT+GGG | 0.434591 | 8.3:+52212974 | MS.gene36124:CDS |
| TTTAATAACTGGCGGAGCGT+CGG | 0.442410 | 8.3:+52210661 | MS.gene36124:CDS |
| TTCTGGTTTGAATGGTGATT+CGG | 0.443044 | 8.3:-52210618 | None:intergenic |
| TCACCTGTTCGAAACCCATT+CGG | 0.459522 | 8.3:-52210944 | None:intergenic |
| ATTCTTGTTAATGCTGCTGC+TGG | 0.464854 | 8.3:+52210890 | MS.gene36124:CDS |
| CTCTTCTTAGCATCAGATGC+AGG | 0.469651 | 8.3:+52213014 | MS.gene36124:CDS |
| GCTGAAGATCTTTCGCCGAA+TGG | 0.470073 | 8.3:+52210929 | MS.gene36124:CDS |
| TTCCTGCTGTTGGGTTTGAA+GGG | 0.470572 | 8.3:+52210798 | MS.gene36124:CDS |
| TGGAGCGTCGGTTGCTGTGA+TGG | 0.472642 | 8.3:+52210721 | MS.gene36124:CDS |
| CACTTAAGTATCTCAAGAAA+GGG | 0.475461 | 8.3:+52212470 | MS.gene36124:CDS |
| TGAAGGGGATGTGAGAAAGC+AGG | 0.476077 | 8.3:+52210814 | MS.gene36124:CDS |
| CAAGAAACTTGGCACTGGAA+TGG | 0.477594 | 8.3:+52212832 | MS.gene36124:CDS |
| CAGGTAGGAGCTCTTCTAGC+GGG | 0.478409 | 8.3:+52212497 | MS.gene36124:CDS |
| GCACTTAAGTATCTCAAGAA+AGG | 0.480331 | 8.3:+52212469 | MS.gene36124:CDS |
| TGATTCTACTACAAGAAACT+TGG | 0.507418 | 8.3:+52212821 | MS.gene36124:CDS |
| ATTATGATATTCGAGTCAAT+GGG | 0.519870 | 8.3:+52212862 | MS.gene36124:CDS |
| CCGCTAGAAGAGCTCCTACC+TGG | 0.524939 | 8.3:-52212496 | None:intergenic |
| GGAGCCAGTTTACTCATGCC+AGG | 0.525918 | 8.3:-52212912 | None:intergenic |
| CGAGTCAATGGGATTGCACC+AGG | 0.526292 | 8.3:+52212873 | MS.gene36124:CDS |
| TACTACAAGAAACTTGGCAC+TGG | 0.536669 | 8.3:+52212827 | MS.gene36124:CDS |
| AATTCACGTATCTGCTGCAA+AGG | 0.546890 | 8.3:+52212573 | MS.gene36124:CDS |
| TATCTCAAGAAAGGGGCACC+AGG | 0.551040 | 8.3:+52212478 | MS.gene36124:CDS |
| CGGTTGCTGTGATGGGTCGT+CGG | 0.552646 | 8.3:+52210729 | MS.gene36124:CDS |
| GGAGCGTCGGTTGCTGTGAT+GGG | 0.554476 | 8.3:+52210722 | MS.gene36124:CDS |
| TTCTTGTTAATGCTGCTGCT+GGG | 0.557653 | 8.3:+52210891 | MS.gene36124:CDS |
| TCCCCTTCAAACCCAACAGC+AGG | 0.558276 | 8.3:-52210800 | None:intergenic |
| AAATGCCTCTGTATAAACTC+GGG | 0.561517 | 8.3:+52212964 | MS.gene36124:CDS |
| CCAGGTAGGAGCTCTTCTAG+CGG | 0.564165 | 8.3:+52212496 | MS.gene36124:CDS |
| TCAACGCAATTGGGGAAACA+TGG | 0.567028 | 8.3:+52210701 | MS.gene36124:CDS |
| TTGAAATATCAACGCAATTG+GGG | 0.574459 | 8.3:+52210693 | MS.gene36124:CDS |
| GAAATGCCTCTGTATAAACT+CGG | 0.575098 | 8.3:+52212963 | MS.gene36124:CDS |
| GGAGTGTCACTTATTGGACC+TGG | 0.583283 | 8.3:-52212891 | None:intergenic |
| TCCTGCTGTTGGGTTTGAAG+GGG | 0.588047 | 8.3:+52210799 | MS.gene36124:CDS |
| CCTGAAGAAATAGGTAGCAG+AGG | 0.588385 | 8.3:+52212933 | MS.gene36124:CDS |
| AGAAACTTGGCACTGGAATG+GGG | 0.594972 | 8.3:+52212834 | MS.gene36124:CDS |
| AGGTAGGAGCTCTTCTAGCG+GGG | 0.614360 | 8.3:+52212498 | MS.gene36124:CDS |
| TCAAGAAAGGGGCACCAGGT+AGG | 0.618320 | 8.3:+52212482 | MS.gene36124:CDS |
| TGTGAGAAAGCAGGAAGATG+CGG | 0.618720 | 8.3:+52210823 | MS.gene36124:CDS |
| GGAGAAATGGGATATTGCAA+TGG | 0.626822 | 8.3:+52212986 | MS.gene36124:CDS |
| GGTCCAATAAGTGACACTCC+TGG | 0.636505 | 8.3:+52212894 | MS.gene36124:CDS |
| ATTGGGGAAACATGGAGCGT+CGG | 0.642414 | 8.3:+52210709 | MS.gene36124:CDS |
| GGTAGGAGCTCTTCTAGCGG+GGG | 0.656885 | 8.3:+52212499 | MS.gene36124:CDS |
| AAAGTAGCTTTAATAACTGG+CGG | 0.668949 | 8.3:+52210653 | MS.gene36124:CDS |
| ACTTAAGTATCTCAAGAAAG+GGG | 0.678718 | 8.3:+52212471 | MS.gene36124:CDS |
| TTCTCCCCGAGTTTATACAG+AGG | 0.690396 | 8.3:-52212969 | None:intergenic |
| AATGCCTCTGTATAAACTCG+GGG | 0.692746 | 8.3:+52212965 | MS.gene36124:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATATAATTATGTAATTAT+AGG | + | chr8.3:52213300-52213319 | MS.gene36124:intron | 10.0% |
| !! | GATATAATTATGTAATTATA+GGG | + | chr8.3:52213301-52213320 | MS.gene36124:intron | 10.0% |
| !!! | AATTTCATCTTTTTAATTTA+AGG | + | chr8.3:52212621-52212640 | MS.gene36124:intron | 10.0% |
| !!! | CTAATAATAATTCTAAAAAA+TGG | - | chr8.3:52211111-52211130 | None:intergenic | 10.0% |
| !!! | TTTTTAATTTAAGGATTTAA+GGG | + | chr8.3:52212630-52212649 | MS.gene36124:intron | 10.0% |
| !! | ACTAATGAAAAAAAAAACTT+AGG | - | chr8.3:52211342-52211361 | None:intergenic | 15.0% |
| !! | ATTAAATAAGAGAAATGAAT+TGG | + | chr8.3:52212376-52212395 | MS.gene36124:intron | 15.0% |
| !! | TTAATCATGTTTAAATTTGA+GGG | - | chr8.3:52211875-52211894 | None:intergenic | 15.0% |
| !! | TTTAATCATGTTTAAATTTG+AGG | - | chr8.3:52211876-52211895 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTTTTTAGATGAA+TGG | + | chr8.3:52210969-52210988 | MS.gene36124:intron | 15.0% |
| !!! | CATTTCTCTTATTTAATTTT+AGG | - | chr8.3:52212373-52212392 | None:intergenic | 15.0% |
| !!! | CTAAATTTTAATTATTCAAC+AGG | + | chr8.3:52212791-52212810 | MS.gene36124:intron | 15.0% |
| !!! | CTTTTTAATTTAAGGATTTA+AGG | + | chr8.3:52212629-52212648 | MS.gene36124:intron | 15.0% |
| !! | AAAGATGAAATTTAACATCT+AGG | - | chr8.3:52212613-52212632 | None:intergenic | 20.0% |
| !! | AATTTCTACAACTTTATGAA+TGG | - | chr8.3:52212042-52212061 | None:intergenic | 20.0% |
| !! | ACTTACTTAACCATTTAAAA+AGG | - | chr8.3:52211481-52211500 | None:intergenic | 20.0% |
| !! | ATTCGACTTACTTAAAATTA+TGG | + | chr8.3:52211919-52211938 | MS.gene36124:intron | 20.0% |
| !! | GCAAAATAATATATCTTCAT+TGG | - | chr8.3:52212694-52212713 | None:intergenic | 20.0% |
| !! | GGTTAATTAAGTTTAATTGA+TGG | + | chr8.3:52211940-52211959 | MS.gene36124:intron | 20.0% |
| !! | GTTAAAAGTAAGAGTTTAAT+AGG | - | chr8.3:52212770-52212789 | None:intergenic | 20.0% |
| !! | TTCAATGTAAATACATATGT+TGG | - | chr8.3:52211083-52211102 | None:intergenic | 20.0% |
| !!! | AATTCGACAACTTTTTAAAT+TGG | + | chr8.3:52211214-52211233 | MS.gene36124:intron | 20.0% |
| !!! | ATTTGACTTTTAAGCATTTT+GGG | + | chr8.3:52210858-52210877 | MS.gene36124:CDS | 20.0% |
| !!! | TCTTTGATATCCTTTTTAAA+TGG | + | chr8.3:52211468-52211487 | MS.gene36124:intron | 20.0% |
| ! | AAAATTGCAAATACATTCAC+AGG | - | chr8.3:52211404-52211423 | None:intergenic | 25.0% |
| ! | AACTTTATGAATGGTTAACA+CGG | - | chr8.3:52212033-52212052 | None:intergenic | 25.0% |
| ! | ATTATGATATTCGAGTCAAT+GGG | + | chr8.3:52212862-52212881 | MS.gene36124:CDS | 25.0% |
| ! | CATGATTAATTAGTAGTGTT+TGG | + | chr8.3:52213183-52213202 | MS.gene36124:intron | 25.0% |
| ! | CTGTAAATTAGATAGAATCT+TGG | - | chr8.3:52212293-52212312 | None:intergenic | 25.0% |
| ! | TAAATTAAGCTAATCCAAAC+CGG | - | chr8.3:52211551-52211570 | None:intergenic | 25.0% |
| ! | TATTATTAGTGTAGTTGTGT+TGG | + | chr8.3:52211122-52211141 | MS.gene36124:intron | 25.0% |
| ! | TTAATTAGTAGTGTTTGGTT+TGG | + | chr8.3:52213188-52213207 | MS.gene36124:intron | 25.0% |
| ! | TTCAAACCAGAAATCTTAAA+AGG | + | chr8.3:52210629-52210648 | MS.gene36124:CDS | 25.0% |
| !! | AAATTGGCAAACAATCATTT+TGG | + | chr8.3:52211230-52211249 | MS.gene36124:intron | 25.0% |
| !! | AAGTCATGTAAATGTTTCTA+AGG | - | chr8.3:52213128-52213147 | None:intergenic | 25.0% |
| !! | AGCTTTGGTTAATAGATTAT+GGG | + | chr8.3:52211525-52211544 | MS.gene36124:intron | 25.0% |
| !! | AGTATAAATCAGTTTTACAC+TGG | + | chr8.3:52212665-52212684 | MS.gene36124:intron | 25.0% |
| !! | GTCTCTTTAGTTAGTTATTT+TGG | + | chr8.3:52211315-52211334 | MS.gene36124:intron | 25.0% |
| !! | TTCATTATTGTTTGCAGTTT+TGG | + | chr8.3:52212408-52212427 | MS.gene36124:intron | 25.0% |
| !! | TTTGAAATATCAACGCAATT+GGG | + | chr8.3:52210692-52210711 | MS.gene36124:CDS | 25.0% |
| !!! | ATAAGTTTTGTGTAGTTGTT+TGG | + | chr8.3:52211585-52211604 | MS.gene36124:intron | 25.0% |
| !!! | CTGTAAATGTTGTATTTTTG+TGG | + | chr8.3:52213088-52213107 | MS.gene36124:intron | 25.0% |
| !!! | GATTTGACTTTTAAGCATTT+TGG | + | chr8.3:52210857-52210876 | MS.gene36124:CDS | 25.0% |
| !!! | TAAGTTTTGTGTAGTTGTTT+GGG | + | chr8.3:52211586-52211605 | MS.gene36124:intron | 25.0% |
| !!! | TAGCTTTGGTTAATAGATTA+TGG | + | chr8.3:52211524-52211543 | MS.gene36124:intron | 25.0% |
| !!! | TGCAATTTTGATACATTTAG+TGG | + | chr8.3:52211415-52211434 | MS.gene36124:intron | 25.0% |
| !!! | TTTAAGATTTCTGGTTTGAA+TGG | - | chr8.3:52210629-52210648 | None:intergenic | 25.0% |
| ACTTAAGTATCTCAAGAAAG+GGG | + | chr8.3:52212471-52212490 | MS.gene36124:CDS | 30.0% | |
| ATAAGTTGTTACACCTACTA+TGG | - | chr8.3:52211829-52211848 | None:intergenic | 30.0% | |
| CACTTAAGTATCTCAAGAAA+GGG | + | chr8.3:52212470-52212489 | MS.gene36124:CDS | 30.0% | |
| GATTATGATATTCGAGTCAA+TGG | + | chr8.3:52212861-52212880 | MS.gene36124:CDS | 30.0% | |
| GCATATCATAATAAGTGCTT+GGG | + | chr8.3:52211782-52211801 | MS.gene36124:intron | 30.0% | |
| GTAAATACATATGTTGGTGT+CGG | - | chr8.3:52211077-52211096 | None:intergenic | 30.0% | |
| GTAGTGAAATTAGACAGTAT+AGG | + | chr8.3:52213271-52213290 | MS.gene36124:intron | 30.0% | |
| TCAATCATGTGTAAATGAAG+TGG | + | chr8.3:52211501-52211520 | MS.gene36124:intron | 30.0% | |
| TGATTCTACTACAAGAAACT+TGG | + | chr8.3:52212821-52212840 | MS.gene36124:CDS | 30.0% | |
| TGCATATCATAATAAGTGCT+TGG | + | chr8.3:52211781-52211800 | MS.gene36124:intron | 30.0% | |
| TTGAAATATCAACGCAATTG+GGG | + | chr8.3:52210693-52210712 | MS.gene36124:CDS | 30.0% | |
| ! | GCTTAATTTAGCTTATCTAC+TGG | + | chr8.3:52211561-52211580 | MS.gene36124:intron | 30.0% |
| ! | GTTTGAAATATCAACGCAAT+TGG | + | chr8.3:52210691-52210710 | MS.gene36124:CDS | 30.0% |
| !! | AAAGTAGCTTTAATAACTGG+CGG | + | chr8.3:52210653-52210672 | MS.gene36124:CDS | 30.0% |
| !!! | ACTTTGCCTTTTAAGATTTC+TGG | - | chr8.3:52210638-52210657 | None:intergenic | 30.0% |
| !!! | TTTTAGGATAACTACTCATC+TGG | - | chr8.3:52212357-52212376 | None:intergenic | 30.0% |
| AAATGCCTCTGTATAAACTC+GGG | + | chr8.3:52212964-52212983 | MS.gene36124:CDS | 35.0% | |
| ACAACTTATGAACCATCTAC+AGG | + | chr8.3:52211840-52211859 | MS.gene36124:intron | 35.0% | |
| AGTATCGCATATACCAAGTA+GGG | - | chr8.3:52213070-52213089 | None:intergenic | 35.0% | |
| ATATCAAAGAGACGATGATG+TGG | - | chr8.3:52211458-52211477 | None:intergenic | 35.0% | |
| ATCAGAATCCCTCTATAATG+TGG | + | chr8.3:52212234-52212253 | MS.gene36124:intron | 35.0% | |
| ATTAGTGCTACGTTGCATTA+TGG | + | chr8.3:52212535-52212554 | MS.gene36124:CDS | 35.0% | |
| GAAATGCCTCTGTATAAACT+CGG | + | chr8.3:52212963-52212982 | MS.gene36124:CDS | 35.0% | |
| GATCATTGCCACATTATAGA+GGG | - | chr8.3:52212245-52212264 | None:intergenic | 35.0% | |
| GCACTTAAGTATCTCAAGAA+AGG | + | chr8.3:52212469-52212488 | MS.gene36124:CDS | 35.0% | |
| TGATCATTGCCACATTATAG+AGG | - | chr8.3:52212246-52212265 | None:intergenic | 35.0% | |
| TGTAAATGAAGTGGTAGCTT+TGG | + | chr8.3:52211510-52211529 | MS.gene36124:intron | 35.0% | |
| TTGGTTAATAGATTATGGGC+CGG | + | chr8.3:52211529-52211548 | MS.gene36124:intron | 35.0% | |
| ! | AGTTCTTCAATCTGCTGTTT+CGG | + | chr8.3:52210757-52210776 | MS.gene36124:CDS | 35.0% |
| ! | ATGCTGCTTGAACATCAATT+TGG | - | chr8.3:52212072-52212091 | None:intergenic | 35.0% |
| ! | GTTGAGTATTGTGTATGTGT+TGG | + | chr8.3:52211159-52211178 | MS.gene36124:intron | 35.0% |
| ! | TGACTTTTAAGCATTTTGGG+AGG | + | chr8.3:52210861-52210880 | MS.gene36124:CDS | 35.0% |
| ! | TGCTGCTTGAACATCAATTT+GGG | - | chr8.3:52212071-52212090 | None:intergenic | 35.0% |
| ! | TGTGATCATTCCTTTTAGAC+TGG | + | chr8.3:52212176-52212195 | MS.gene36124:intron | 35.0% |
| !! | CTACTTCTCATTGACTTTGA+AGG | - | chr8.3:52213151-52213170 | None:intergenic | 35.0% |
| !! | GCACTGACATTTTTGATAGA+AGG | + | chr8.3:52211022-52211041 | MS.gene36124:intron | 35.0% |
| !! | GGCAAAGTAGCTTTAATAAC+TGG | + | chr8.3:52210650-52210669 | MS.gene36124:CDS | 35.0% |
| !! | GTGTTTTGGATTCCATGTTT+GGG | + | chr8.3:52213219-52213238 | MS.gene36124:intron | 35.0% |
| !! | TTCTGGTTTGAATGGTGATT+CGG | - | chr8.3:52210621-52210640 | None:intergenic | 35.0% |
| !! | TTTTTGATAGAAGGTGTGTC+CGG | + | chr8.3:52211031-52211050 | MS.gene36124:intron | 35.0% |
| !!! | GTTTTGGATATCGATTCTGT+TGG | + | chr8.3:52212424-52212443 | MS.gene36124:intron | 35.0% |
| AATGCCTCTGTATAAACTCG+GGG | + | chr8.3:52212965-52212984 | MS.gene36124:CDS | 40.0% | |
| AATTCACGTATCTGCTGCAA+AGG | + | chr8.3:52212573-52212592 | MS.gene36124:CDS | 40.0% | |
| ACCAAAGCAAAACCCAAACA+TGG | - | chr8.3:52213234-52213253 | None:intergenic | 40.0% | |
| ATTCTTGTTAATGCTGCTGC+TGG | + | chr8.3:52210890-52210909 | MS.gene36124:CDS | 40.0% | |
| CACAAACATGTATCAGACAC+CGG | - | chr8.3:52211053-52211072 | None:intergenic | 40.0% | |
| CAGTATCGCATATACCAAGT+AGG | - | chr8.3:52213071-52213090 | None:intergenic | 40.0% | |
| GGAAGTTGTTTATCCGAACA+GGG | + | chr8.3:52211803-52211822 | MS.gene36124:intron | 40.0% | |
| GGAGAAATGGGATATTGCAA+TGG | + | chr8.3:52212986-52213005 | MS.gene36124:CDS | 40.0% | |
| GTATAAACTCGGGGAGAAAT+GGG | + | chr8.3:52212974-52212993 | MS.gene36124:CDS | 40.0% | |
| TAATAGATTATGGGCCGGTT+TGG | + | chr8.3:52211534-52211553 | MS.gene36124:intron | 40.0% | |
| TACTACAAGAAACTTGGCAC+TGG | + | chr8.3:52212827-52212846 | MS.gene36124:CDS | 40.0% | |
| TATACCAAGTAGGGAACACA+TGG | - | chr8.3:52213061-52213080 | None:intergenic | 40.0% | |
| TGTATAAACTCGGGGAGAAA+TGG | + | chr8.3:52212973-52212992 | MS.gene36124:CDS | 40.0% | |
| TTATCCATGTGTTCCCTACT+TGG | + | chr8.3:52213054-52213073 | MS.gene36124:intron | 40.0% | |
| TTCTTGTTAATGCTGCTGCT+GGG | + | chr8.3:52210891-52210910 | MS.gene36124:CDS | 40.0% | |
| TTGTCTGTGACCAGTCTAAA+AGG | - | chr8.3:52212189-52212208 | None:intergenic | 40.0% | |
| ! | AAACTGGCTCCTGAAGAAAT+AGG | + | chr8.3:52212924-52212943 | MS.gene36124:CDS | 40.0% |
| ! | AAGAAACTTGGCACTGGAAT+GGG | + | chr8.3:52212833-52212852 | MS.gene36124:CDS | 40.0% |
| !! | CATTTTGGTCTCTAAACGTG+TGG | + | chr8.3:52211245-52211264 | MS.gene36124:intron | 40.0% |
| !! | GGTGTTTTGGATTCCATGTT+TGG | + | chr8.3:52213218-52213237 | MS.gene36124:intron | 40.0% |
| !! | TCCATGTTTGGGTTTTGCTT+TGG | + | chr8.3:52213230-52213249 | MS.gene36124:intron | 40.0% |
| ATTCCTGCTGTTGGGTTTGA+AGG | + | chr8.3:52210797-52210816 | MS.gene36124:CDS | 45.0% | |
| CCTGAAGAAATAGGTAGCAG+AGG | + | chr8.3:52212933-52212952 | MS.gene36124:CDS | 45.0% | |
| CGTTGCATTATGGAGCTTCT+TGG | + | chr8.3:52212545-52212564 | MS.gene36124:CDS | 45.0% | |
| CTAACGAGAGTAGAGTGATG+TGG | - | chr8.3:52212716-52212735 | None:intergenic | 45.0% | |
| CTCTTCTTAGCATCAGATGC+AGG | + | chr8.3:52213014-52213033 | MS.gene36124:CDS | 45.0% | |
| CTGAAGATCTTTCGCCGAAT+GGG | + | chr8.3:52210930-52210949 | MS.gene36124:CDS | 45.0% | |
| GGGAAGTTGTTTATCCGAAC+AGG | + | chr8.3:52211802-52211821 | MS.gene36124:intron | 45.0% | |
| GGTTAGCAGAGTTCAATGAG+TGG | - | chr8.3:52212000-52212019 | None:intergenic | 45.0% | |
| TCAACGCAATTGGGGAAACA+TGG | + | chr8.3:52210701-52210720 | MS.gene36124:CDS | 45.0% | |
| TCACCTGTTCGAAACCCATT+CGG | - | chr8.3:52210947-52210966 | None:intergenic | 45.0% | |
| TGAACTCTGCTAACCACATG+CGG | + | chr8.3:52212005-52212024 | MS.gene36124:intron | 45.0% | |
| TGTGAGAAAGCAGGAAGATG+CGG | + | chr8.3:52210823-52210842 | MS.gene36124:CDS | 45.0% | |
| TTCCTGCTGTTGGGTTTGAA+GGG | + | chr8.3:52210798-52210817 | MS.gene36124:CDS | 45.0% | |
| TTCTCCCCGAGTTTATACAG+AGG | - | chr8.3:52212972-52212991 | None:intergenic | 45.0% | |
| TTTAATAACTGGCGGAGCGT+CGG | + | chr8.3:52210661-52210680 | MS.gene36124:CDS | 45.0% | |
| ! | AGAAACTTGGCACTGGAATG+GGG | + | chr8.3:52212834-52212853 | MS.gene36124:CDS | 45.0% |
| ! | CAAGAAACTTGGCACTGGAA+TGG | + | chr8.3:52212832-52212851 | MS.gene36124:CDS | 45.0% |
| ! | CCTCTGCTACCTATTTCTTC+AGG | - | chr8.3:52212936-52212955 | None:intergenic | 45.0% |
| ! | TTGGTGACAGTCTAGCTATC+TGG | + | chr8.3:52213249-52213268 | MS.gene36124:intron | 45.0% |
| !! | AGTGTTTGGTTTGGACTTGC+TGG | + | chr8.3:52213197-52213216 | MS.gene36124:intron | 45.0% |
| !! | ATGCCAGGAGTGTCACTTAT+TGG | - | chr8.3:52212900-52212919 | None:intergenic | 45.0% |
| !!! | GTTTGGACTTGCTGGTGTTT+TGG | + | chr8.3:52213205-52213224 | MS.gene36124:intron | 45.0% |
| ACACCTACTATGGCCCTGTT+CGG | - | chr8.3:52211819-52211838 | None:intergenic | 50.0% | |
| ATTGGGGAAACATGGAGCGT+CGG | + | chr8.3:52210709-52210728 | MS.gene36124:CDS | 50.0% | |
| CACTCCTGGCATGAGTAAAC+TGG | + | chr8.3:52212908-52212927 | MS.gene36124:CDS | 50.0% | |
| CGCTTTCGATTCCTGCTGTT+GGG | + | chr8.3:52210789-52210808 | MS.gene36124:CDS | 50.0% | |
| GCTGAAGATCTTTCGCCGAA+TGG | + | chr8.3:52210929-52210948 | MS.gene36124:CDS | 50.0% | |
| GGGTGACAAAGTCCTGTAGA+TGG | - | chr8.3:52211855-52211874 | None:intergenic | 50.0% | |
| GGTCCAATAAGTGACACTCC+TGG | + | chr8.3:52212894-52212913 | MS.gene36124:CDS | 50.0% | |
| TATCCGAACAGGGCCATAGT+AGG | + | chr8.3:52211813-52211832 | MS.gene36124:intron | 50.0% | |
| TCCTGCTGTTGGGTTTGAAG+GGG | + | chr8.3:52210799-52210818 | MS.gene36124:CDS | 50.0% | |
| TCGCTTTCGATTCCTGCTGT+TGG | + | chr8.3:52210788-52210807 | MS.gene36124:CDS | 50.0% | |
| TGAAGGGGATGTGAGAAAGC+AGG | + | chr8.3:52210814-52210833 | MS.gene36124:CDS | 50.0% | |
| ! | TTAATAACTGGCGGAGCGTC+GGG | + | chr8.3:52210662-52210681 | MS.gene36124:CDS | 50.0% |
| !! | GGAGTGTCACTTATTGGACC+TGG | - | chr8.3:52212894-52212913 | None:intergenic | 50.0% |
| !! | TATCTCAAGAAAGGGGCACC+AGG | + | chr8.3:52212478-52212497 | MS.gene36124:CDS | 50.0% |
| AGGTAGGAGCTCTTCTAGCG+GGG | + | chr8.3:52212498-52212517 | MS.gene36124:CDS | 55.0% | |
| CAGGTAGGAGCTCTTCTAGC+GGG | + | chr8.3:52212497-52212516 | MS.gene36124:CDS | 55.0% | |
| CCAGGTAGGAGCTCTTCTAG+CGG | + | chr8.3:52212496-52212515 | MS.gene36124:CDS | 55.0% | |
| CGAGTCAATGGGATTGCACC+AGG | + | chr8.3:52212873-52212892 | MS.gene36124:CDS | 55.0% | |
| GGAGCCAGTTTACTCATGCC+AGG | - | chr8.3:52212915-52212934 | None:intergenic | 55.0% | |
| GGTTAACACGGTTCCGCATG+TGG | - | chr8.3:52212021-52212040 | None:intergenic | 55.0% | |
| TCCCCTTCAAACCCAACAGC+AGG | - | chr8.3:52210803-52210822 | None:intergenic | 55.0% | |
| ! | TCGCCGAATGGGTTTCGAAC+AGG | + | chr8.3:52210941-52210960 | MS.gene36124:CDS | 55.0% |
| !! | TCAAGAAAGGGGCACCAGGT+AGG | + | chr8.3:52212482-52212501 | MS.gene36124:CDS | 55.0% |
| CCGCTAGAAGAGCTCCTACC+TGG | - | chr8.3:52212499-52212518 | None:intergenic | 60.0% | |
| GGTAGGAGCTCTTCTAGCGG+GGG | + | chr8.3:52212499-52212518 | MS.gene36124:CDS | 60.0% | |
| !! | CGGTTGCTGTGATGGGTCGT+CGG | + | chr8.3:52210729-52210748 | MS.gene36124:CDS | 60.0% |
| !! | GGAGCGTCGGTTGCTGTGAT+GGG | + | chr8.3:52210722-52210741 | MS.gene36124:CDS | 60.0% |
| !! | TGGAGCGTCGGTTGCTGTGA+TGG | + | chr8.3:52210721-52210740 | MS.gene36124:CDS | 60.0% |
| !! | ACTGGCGGAGCGTCGGGAAT+TGG | + | chr8.3:52210668-52210687 | MS.gene36124:CDS | 65.0% |
| !! | CTGGCGGAGCGTCGGGAATT+GGG | + | chr8.3:52210669-52210688 | MS.gene36124:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 52210605 | 52213329 | 52210605 | ID=MS.gene36124 |
| chr8.3 | mRNA | 52210605 | 52213329 | 52210605 | ID=MS.gene36124.t1;Parent=MS.gene36124 |
| chr8.3 | exon | 52210605 | 52210962 | 52210605 | ID=MS.gene36124.t1.exon1;Parent=MS.gene36124.t1 |
| chr8.3 | CDS | 52210605 | 52210962 | 52210605 | ID=cds.MS.gene36124.t1;Parent=MS.gene36124.t1 |
| chr8.3 | exon | 52212425 | 52212594 | 52212425 | ID=MS.gene36124.t1.exon2;Parent=MS.gene36124.t1 |
| chr8.3 | CDS | 52212425 | 52212594 | 52212425 | ID=cds.MS.gene36124.t1;Parent=MS.gene36124.t1 |
| chr8.3 | exon | 52212813 | 52213035 | 52212813 | ID=MS.gene36124.t1.exon3;Parent=MS.gene36124.t1 |
| chr8.3 | CDS | 52212813 | 52213035 | 52212813 | ID=cds.MS.gene36124.t1;Parent=MS.gene36124.t1 |
| chr8.3 | exon | 52213322 | 52213329 | 52213322 | ID=MS.gene36124.t1.exon4;Parent=MS.gene36124.t1 |
| chr8.3 | CDS | 52213322 | 52213329 | 52213322 | ID=cds.MS.gene36124.t1;Parent=MS.gene36124.t1 |
| Gene Sequence |
| Protein sequence |
