Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37434.t1 | XP_003618301.1 | 92.5 | 212 | 16 | 0 | 1 | 212 | 1 | 212 | 5.10E-109 | 404.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37434.t1 | G7KIS9 | 92.5 | 212 | 16 | 0 | 1 | 212 | 1 | 212 | 3.7e-109 | 404.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene37434 | -0.819823 | 9.48E-53 | -1.69E-46 |
| MS.gene04917 | MS.gene37434 | -0.811922 | 5.49E-51 | -1.69E-46 |
| MS.gene04991 | MS.gene37434 | 0.820045 | 8.44E-53 | -1.69E-46 |
| MS.gene050317 | MS.gene37434 | -0.812243 | 4.68E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene37434 | 0.813424 | 2.58E-51 | -1.69E-46 |
| MS.gene050762 | MS.gene37434 | -0.84639 | 2.24E-59 | -1.69E-46 |
| MS.gene050763 | MS.gene37434 | -0.844374 | 7.87E-59 | -1.69E-46 |
| MS.gene051535 | MS.gene37434 | -0.806081 | 9.78E-50 | -1.69E-46 |
| MS.gene051631 | MS.gene37434 | 0.840806 | 6.97E-58 | -1.69E-46 |
| MS.gene052242 | MS.gene37434 | 0.826036 | 3.38E-54 | -1.69E-46 |
| MS.gene053167 | MS.gene37434 | -0.800678 | 1.29E-48 | -1.69E-46 |
| MS.gene054379 | MS.gene37434 | -0.826844 | 2.17E-54 | -1.69E-46 |
| MS.gene056464 | MS.gene37434 | 0.847456 | 1.14E-59 | -1.69E-46 |
| MS.gene056830 | MS.gene37434 | 0.806376 | 8.48E-50 | -1.69E-46 |
| MS.gene057451 | MS.gene37434 | 0.829487 | 5.01E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene37434 | 0.833963 | 3.94E-56 | -1.69E-46 |
| MS.gene058638 | MS.gene37434 | -0.835598 | 1.53E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene37434 | -0.844252 | 8.48E-59 | -1.69E-46 |
| MS.gene058661 | MS.gene37434 | 0.808646 | 2.80E-50 | -1.69E-46 |
| MS.gene059872 | MS.gene37434 | 0.814642 | 1.39E-51 | -1.69E-46 |
| MS.gene060084 | MS.gene37434 | -0.825971 | 3.50E-54 | -1.69E-46 |
| MS.gene060297 | MS.gene37434 | -0.814925 | 1.20E-51 | -1.69E-46 |
| MS.gene060563 | MS.gene37434 | -0.817851 | 2.66E-52 | -1.69E-46 |
| MS.gene060869 | MS.gene37434 | -0.833318 | 5.71E-56 | -1.69E-46 |
| MS.gene060870 | MS.gene37434 | -0.815199 | 1.04E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37434.t1 | MTR_6g007360 | 92.019 | 213 | 17 | 0 | 1 | 213 | 1 | 213 | 2.83e-141 | 404 |
| MS.gene37434.t1 | MTR_1g115165 | 92.019 | 213 | 17 | 0 | 1 | 213 | 1 | 213 | 3.40e-141 | 404 |
| MS.gene37434.t1 | MTR_3g104270 | 95.475 | 221 | 10 | 0 | 228 | 448 | 385 | 605 | 1.18e-132 | 395 |
| MS.gene37434.t1 | MTR_3g104280 | 95.023 | 221 | 11 | 0 | 228 | 448 | 385 | 605 | 2.89e-130 | 389 |
| MS.gene37434.t1 | MTR_7g446320 | 86.911 | 191 | 25 | 0 | 23 | 213 | 9 | 199 | 3.68e-115 | 337 |
| MS.gene37434.t1 | MTR_4g078180 | 91.566 | 166 | 14 | 0 | 1 | 166 | 1 | 166 | 1.53e-113 | 331 |
| MS.gene37434.t1 | MTR_3g022250 | 65.258 | 213 | 11 | 2 | 1 | 213 | 1 | 150 | 7.61e-89 | 268 |
| MS.gene37434.t1 | MTR_5g094775 | 89.381 | 113 | 12 | 0 | 46 | 158 | 1 | 113 | 1.11e-68 | 219 |
| MS.gene37434.t1 | MTR_1g016760 | 50.400 | 250 | 68 | 10 | 228 | 448 | 405 | 627 | 4.11e-31 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37434.t1 | AT2G25970 | 46.667 | 180 | 58 | 8 | 228 | 396 | 432 | 584 | 5.60e-22 | 99.4 |
Find 153 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGCTATGATTAAAGAATT+TGG | 0.165621 | 3.4:-91359672 | MS.gene37434:CDS |
| TCTAGCCAGGCCCCGCCTTC+TGG | 0.193239 | 3.4:-91358319 | MS.gene37434:CDS |
| CAGTAGTGGGTTGGGAAGTT+TGG | 0.252253 | 3.4:+91358560 | None:intergenic |
| AATGGCTCCGGCGGTGGTTG+TGG | 0.277061 | 3.4:+91359318 | None:intergenic |
| GGTTGGTAGCATAGCCTTGC+TGG | 0.287848 | 3.4:+91358533 | None:intergenic |
| ATTACTCCCACTGCCATAAC+TGG | 0.291727 | 3.4:+91358633 | None:intergenic |
| TATAAACTATCACAATTTAC+TGG | 0.291836 | 3.4:-91359867 | MS.gene37434:CDS |
| TCTGTCATCTTCCACAGTTT+TGG | 0.311646 | 3.4:+91359588 | None:intergenic |
| AGTAGTGGGTTGGGAAGTTT+GGG | 0.330555 | 3.4:+91358561 | None:intergenic |
| TCATATGGAAATAGTTCTTA+TGG | 0.338429 | 3.4:-91358184 | MS.gene37434:CDS |
| GAAACTCCTCAACCAGGTTA+TGG | 0.345359 | 3.4:-91358505 | MS.gene37434:CDS |
| GACTGACCATAGCCTCCTGC+TGG | 0.350562 | 3.4:+91358352 | None:intergenic |
| GCAGTGGGCTTTCATGAGTA+TGG | 0.351125 | 3.4:-91359769 | MS.gene37434:CDS |
| TATAATGCGCAACAACAATC+TGG | 0.353841 | 3.4:-91358706 | MS.gene37434:CDS |
| AGTCGCAAGGATAATAGAAT+TGG | 0.354059 | 3.4:-91359441 | MS.gene37434:CDS |
| ATGGCTCCGGCGGTGGTTGT+GGG | 0.356740 | 3.4:+91359319 | None:intergenic |
| AGTGCAAATCCACCTGCTTA+TGG | 0.362303 | 3.4:-91358394 | MS.gene37434:CDS |
| AGTTGGAAGTGTGCCCCTCT+TGG | 0.365119 | 3.4:+91358605 | None:intergenic |
| CCATAGGCCGCTTGGGAGGT+AGG | 0.372582 | 3.4:+91358475 | None:intergenic |
| GAGGGGCACACTTCCAACTA+TGG | 0.374400 | 3.4:-91358601 | MS.gene37434:CDS |
| CCTTCCTTCTCCATCGTTGA+CGG | 0.385198 | 3.4:+91359536 | None:intergenic |
| AAACTCCTCAACCAGGTTAT+GGG | 0.389331 | 3.4:-91358504 | MS.gene37434:CDS |
| TGTTGCTGATCATATGTTTG+TGG | 0.391746 | 3.4:+91358673 | None:intergenic |
| AATGACTTCCAGTCAGCATA+TGG | 0.393501 | 3.4:+91359699 | None:intergenic |
| TATCGGAGATGGATGGAATA+TGG | 0.395548 | 3.4:-91359899 | None:intergenic |
| TCCCTCTGAATTTGAAAGAA+AGG | 0.398885 | 3.4:-91359296 | MS.gene37434:CDS |
| CCTACCTCCCAAGCGGCCTA+TGG | 0.399491 | 3.4:-91358475 | MS.gene37434:CDS |
| GTCGCAAGGATAATAGAATT+GGG | 0.403256 | 3.4:-91359440 | MS.gene37434:CDS |
| TTCCATATGACGGTGGAGTC+TGG | 0.403625 | 3.4:+91358197 | None:intergenic |
| AGTCAACCACAGTCTGGTTA+TGG | 0.407882 | 3.4:-91358451 | MS.gene37434:CDS |
| GGCCAGACTCCACCGTCATA+TGG | 0.410070 | 3.4:-91358199 | MS.gene37434:CDS |
| TATGATCAGCAACAAGGTTA+TGG | 0.411167 | 3.4:-91358664 | MS.gene37434:CDS |
| AACTGCACAGGCTGTTCCAC+AGG | 0.415355 | 3.4:-91358119 | MS.gene37434:CDS |
| CATAGGCCGCTTGGGAGGTA+GGG | 0.417451 | 3.4:+91358476 | None:intergenic |
| CATATCCAGAAGGCGGGGCC+TGG | 0.418708 | 3.4:+91358314 | None:intergenic |
| TCTGGTTATGGACCTGGTTA+TGG | 0.421938 | 3.4:-91358439 | MS.gene37434:CDS |
| CTGGTTGAGGAGTTTCTTGT+TGG | 0.423458 | 3.4:+91358512 | None:intergenic |
| TATGGCTCTGCTCCCAGTTA+TGG | 0.425707 | 3.4:-91358646 | MS.gene37434:CDS |
| CCATAGCCTCCTGCTGGGCT+AGG | 0.435681 | 3.4:+91358358 | None:intergenic |
| CTGGGCAACAGTAGTGGGTT+GGG | 0.439592 | 3.4:+91358552 | None:intergenic |
| AATTTCACCTTCGTCGGAAA+AGG | 0.439918 | 3.4:-91359502 | MS.gene37434:CDS |
| TTCTAGCGGTCGGTAATGTT+AGG | 0.443021 | 3.4:-91359141 | MS.gene37434:intron |
| AGTCAGCATATGGGTTCTCT+TGG | 0.446023 | 3.4:+91359709 | None:intergenic |
| CTCCTTTCTTTCAAATTCAG+AGG | 0.447688 | 3.4:+91359294 | None:intergenic |
| GAGTCTGGCCATAGCTAGGC+TGG | 0.448899 | 3.4:+91358212 | None:intergenic |
| GGTTCCTATCAGTTATGGTC+AGG | 0.451456 | 3.4:-91358743 | MS.gene37434:intron |
| GTTGACTTCCATAGGCCGCT+TGG | 0.454305 | 3.4:+91358467 | None:intergenic |
| TTGACTTCCATAGGCCGCTT+GGG | 0.461597 | 3.4:+91358468 | None:intergenic |
| AGAGGGAATGGCTCCGGCGG+TGG | 0.462291 | 3.4:+91359312 | None:intergenic |
| TCTTTCAAATTCAGAGGGAA+TGG | 0.464436 | 3.4:+91359300 | None:intergenic |
| AGAAGGCGGGGCCTGGCTAG+AGG | 0.466470 | 3.4:+91358321 | None:intergenic |
| GTTGGAAGTGTGCCCCTCTT+GGG | 0.469268 | 3.4:+91358606 | None:intergenic |
| AAAGGTTGTTGATGCAGAAA+TGG | 0.473464 | 3.4:-91359484 | MS.gene37434:CDS |
| GAAGTGTGCCCCTCTTGGGT+TGG | 0.479594 | 3.4:+91358610 | None:intergenic |
| TTATGGTGCTAGTTATGCTC+AGG | 0.481239 | 3.4:-91358167 | MS.gene37434:CDS |
| GAAGGCGGGGCCTGGCTAGA+GGG | 0.486048 | 3.4:+91358322 | None:intergenic |
| GGGTATGGTCCGCAATCATA+TGG | 0.486408 | 3.4:-91358250 | MS.gene37434:CDS |
| CCTAGCCCAGCAGGAGGCTA+TGG | 0.490924 | 3.4:-91358358 | MS.gene37434:CDS |
| GCTGAGCATATCCAGAAGGC+GGG | 0.493910 | 3.4:+91358308 | None:intergenic |
| TAAAGAATTTGGAGCACAGA+TGG | 0.498580 | 3.4:-91359661 | MS.gene37434:CDS |
| TTAACCCAGCCTTGAGGACA+AGG | 0.498607 | 3.4:-91359170 | MS.gene37434:intron |
| AAATTCAGAGGGAATGGCTC+CGG | 0.504002 | 3.4:+91359306 | None:intergenic |
| TCACAGTCACCTAGCCCAGC+AGG | 0.505105 | 3.4:-91358367 | MS.gene37434:CDS |
| GTTGGTAGCATAGCCTTGCT+GGG | 0.508853 | 3.4:+91358534 | None:intergenic |
| TCCTTTCTTTCAAATTCAGA+GGG | 0.511984 | 3.4:+91359295 | None:intergenic |
| CTGCTCCCAGTTATGGCAGT+GGG | 0.512052 | 3.4:-91358639 | MS.gene37434:CDS |
| TTGAGGAGTTTCTTGTTGGT+TGG | 0.513013 | 3.4:+91358516 | None:intergenic |
| TATGGAAGTCAACCACAGTC+TGG | 0.513429 | 3.4:-91358457 | MS.gene37434:CDS |
| ATCTGCTTGTGATCCATAGT+TGG | 0.518728 | 3.4:+91358588 | None:intergenic |
| TTGACGGTCTTCTCTAAACC+TGG | 0.523089 | 3.4:+91359552 | None:intergenic |
| CAAGGTGGCCAGCCTAGCTA+TGG | 0.524469 | 3.4:-91358220 | MS.gene37434:CDS |
| ATAGGCCGCTTGGGAGGTAG+GGG | 0.527994 | 3.4:+91358477 | None:intergenic |
| GCCTTGCTGGGCAACAGTAG+TGG | 0.528254 | 3.4:+91358546 | None:intergenic |
| GCACCAGTGCAACCAGGGTA+TGG | 0.529757 | 3.4:-91358265 | MS.gene37434:CDS |
| GCTCTATGAGTGCCTAACTC+TGG | 0.531849 | 3.4:+91358286 | None:intergenic |
| GTCAGCATATCCCTCTAGCC+AGG | 0.533284 | 3.4:-91358332 | MS.gene37434:CDS |
| GGTGGAGTCTGGCCATAGCT+AGG | 0.535763 | 3.4:+91358208 | None:intergenic |
| GGATATGCTCAGCCAGAGTT+AGG | 0.536855 | 3.4:-91358298 | MS.gene37434:CDS |
| TTTACTGGGACGGATCCTGC+TGG | 0.541794 | 3.4:-91359852 | MS.gene37434:CDS |
| TCTGCTCCCAGTTATGGCAG+TGG | 0.543356 | 3.4:-91358640 | MS.gene37434:CDS |
| GTACTCAACAGATAAACAAA+TGG | 0.543595 | 3.4:-91359637 | MS.gene37434:CDS |
| CATAGAGCACCAGTGCAACC+AGG | 0.543863 | 3.4:-91358271 | MS.gene37434:CDS |
| GAAAGAGTATTGAACGAGAA+AGG | 0.544871 | 3.4:-91359417 | MS.gene37434:CDS |
| GCTGGGCAACAGTAGTGGGT+TGG | 0.546458 | 3.4:+91358551 | None:intergenic |
| GAAACACAGCCTTGTCCTCA+AGG | 0.548152 | 3.4:+91359161 | None:intergenic |
| TAAGCAGGTGGATTTGCACT+TGG | 0.550457 | 3.4:+91358397 | None:intergenic |
| CAATGAAATTTCACCTTCGT+CGG | 0.551705 | 3.4:-91359508 | MS.gene37434:CDS |
| CTGGGACGGATCCTGCTGGA+TGG | 0.552576 | 3.4:-91359848 | MS.gene37434:CDS |
| TAGCGATGGAGCAACTGCAC+AGG | 0.553254 | 3.4:-91358131 | MS.gene37434:CDS |
| GGACCATACCCTGGTTGCAC+TGG | 0.555058 | 3.4:+91358262 | None:intergenic |
| AAGAGAACCCATATGCTGAC+TGG | 0.555231 | 3.4:-91359707 | MS.gene37434:CDS |
| ATCCTGCTGGATGGATCACA+AGG | 0.555428 | 3.4:-91359839 | MS.gene37434:CDS |
| GCCCTTGTGATCCATCCAGC+AGG | 0.555500 | 3.4:+91359837 | None:intergenic |
| AGTGGGTTGGGAAGTTTGGG+AGG | 0.555622 | 3.4:+91358564 | None:intergenic |
| CCACAGTCTGGTTATGGACC+TGG | 0.560474 | 3.4:-91358445 | MS.gene37434:CDS |
| GCGCAACAACAATCTGGGTA+TGG | 0.561377 | 3.4:-91358700 | MS.gene37434:CDS |
| GAGGGAGGAGCACCATAACC+AGG | 0.563328 | 3.4:+91358427 | None:intergenic |
| ATGACTTCCAGTCAGCATAT+GGG | 0.565923 | 3.4:+91359700 | None:intergenic |
| GCTCCATCGCTAGCATACGC+TGG | 0.567046 | 3.4:+91358142 | None:intergenic |
| CTCATGTGATAAGTTGCAGT+GGG | 0.571745 | 3.4:-91359784 | MS.gene37434:CDS |
| AAGACCGTCAACGATGGAGA+AGG | 0.572833 | 3.4:-91359540 | MS.gene37434:CDS |
| TAGCTAGGCTGGCCACCTTG+AGG | 0.574664 | 3.4:+91358223 | None:intergenic |
| CCTTGCTGGGCAACAGTAGT+GGG | 0.574987 | 3.4:+91358547 | None:intergenic |
| GGGAGTAATCCAACCCAAGA+GGG | 0.576300 | 3.4:-91358619 | MS.gene37434:CDS |
| ACTGACCATAGCCTCCTGCT+GGG | 0.577432 | 3.4:+91358353 | None:intergenic |
| GGCTGAGCATATCCAGAAGG+CGG | 0.579823 | 3.4:+91358307 | None:intergenic |
| GCTCCAGCGTATGCTAGCGA+TGG | 0.580238 | 3.4:-91358145 | MS.gene37434:CDS |
| CAATCATATGGTGCTCCTCA+AGG | 0.582124 | 3.4:-91358238 | MS.gene37434:CDS |
| GCTACCCCATAACCTGGTTG+AGG | 0.585519 | 3.4:+91358499 | None:intergenic |
| TTCAGAGGGAATGGCTCCGG+CGG | 0.586583 | 3.4:+91359309 | None:intergenic |
| CCCACTACTGTTGCCCAGCA+AGG | 0.593544 | 3.4:-91358547 | MS.gene37434:CDS |
| TTACTCCCACTGCCATAACT+GGG | 0.595665 | 3.4:+91358634 | None:intergenic |
| AACTCCTCAACCAGGTTATG+GGG | 0.596098 | 3.4:-91358503 | MS.gene37434:CDS |
| ATAATGCGCAACAACAATCT+GGG | 0.598425 | 3.4:-91358705 | MS.gene37434:CDS |
| ACTATCACAATTTACTGGGA+CGG | 0.602646 | 3.4:-91359862 | MS.gene37434:CDS |
| AGTTATGGTCAGGAAAGCTA+TGG | 0.603365 | 3.4:-91358733 | MS.gene37434:CDS |
| GACTGTGATTGACCATAAGC+AGG | 0.606917 | 3.4:+91358382 | None:intergenic |
| AAGGCTGTGTTTCTAGCGGT+CGG | 0.609682 | 3.4:-91359151 | MS.gene37434:CDS |
| TAAGAACTATTTCCATATGA+CGG | 0.615919 | 3.4:+91358187 | None:intergenic |
| GGTCTACCCACAACCACCGC+CGG | 0.618003 | 3.4:-91359325 | MS.gene37434:CDS |
| GTAGGGGCTACCCCATAACC+TGG | 0.621045 | 3.4:+91358493 | None:intergenic |
| ATAAACTATCACAATTTACT+GGG | 0.624745 | 3.4:-91359866 | MS.gene37434:CDS |
| AGACTGTGGTTGACTTCCAT+AGG | 0.624998 | 3.4:+91358459 | None:intergenic |
| CCAGTGTTATCGGAGATGGA+TGG | 0.628923 | 3.4:-91359906 | None:intergenic |
| ACTTCCATAGGCCGCTTGGG+AGG | 0.629551 | 3.4:+91358471 | None:intergenic |
| TCGCAAGGATAATAGAATTG+GGG | 0.629647 | 3.4:-91359439 | MS.gene37434:CDS |
| TATGATTGCGGACCATACCC+TGG | 0.632611 | 3.4:+91358253 | None:intergenic |
| CAACAAGAAACTCCTCAACC+AGG | 0.638274 | 3.4:-91358511 | MS.gene37434:CDS |
| ACTCATGTGATAAGTTGCAG+TGG | 0.639256 | 3.4:-91359785 | MS.gene37434:CDS |
| CAAACATATGATCAGCAACA+AGG | 0.642194 | 3.4:-91358670 | MS.gene37434:CDS |
| TTAGAGAAGACCGTCAACGA+TGG | 0.647015 | 3.4:-91359546 | MS.gene37434:CDS |
| GGACAAGGCTGTGTTTCTAG+CGG | 0.650040 | 3.4:-91359155 | MS.gene37434:CDS |
| ACTGCACAGGCTGTTCCACA+GGG | 0.651647 | 3.4:-91358118 | MS.gene37434:CDS |
| CTGAGCATATCCAGAAGGCG+GGG | 0.654248 | 3.4:+91358309 | None:intergenic |
| TCTGGCTGAGCATATCCAGA+AGG | 0.655491 | 3.4:+91358304 | None:intergenic |
| TGAAACAAAGAAGAGTCGCA+AGG | 0.658704 | 3.4:-91359454 | MS.gene37434:CDS |
| ATAGAGCACCAGTGCAACCA+GGG | 0.660833 | 3.4:-91358270 | MS.gene37434:CDS |
| AAGAATCAGAACCAAAACTG+TGG | 0.662681 | 3.4:-91359599 | MS.gene37434:CDS |
| AGGATGAAGAAGCATTGTTG+TGG | 0.665505 | 3.4:-91359746 | MS.gene37434:CDS |
| TGAGGAGCACCATATGATTG+CGG | 0.676376 | 3.4:+91358241 | None:intergenic |
| GTTTCTTTAACCCAGCCTTG+AGG | 0.677056 | 3.4:-91359176 | MS.gene37434:intron |
| CCGTCAACGATGGAGAAGGA+AGG | 0.677714 | 3.4:-91359536 | MS.gene37434:CDS |
| CAGTCACCTAGCCCAGCAGG+AGG | 0.679822 | 3.4:-91358364 | MS.gene37434:CDS |
| TGGGAGTAATCCAACCCAAG+AGG | 0.681350 | 3.4:-91358620 | MS.gene37434:CDS |
| GGAGTAATCCAACCCAAGAG+GGG | 0.687207 | 3.4:-91358618 | MS.gene37434:CDS |
| ACTTTAGCAACACTGCCCTG+TGG | 0.699397 | 3.4:+91358103 | None:intergenic |
| TCCTGCTGGATGGATCACAA+GGG | 0.706065 | 3.4:-91359838 | MS.gene37434:CDS |
| TCATATGGTGCTCCTCAAGG+TGG | 0.706407 | 3.4:-91358235 | MS.gene37434:CDS |
| GAACTATTTCCATATGACGG+TGG | 0.711749 | 3.4:+91358190 | None:intergenic |
| GTGGGCTTTCATGAGTATGG+AGG | 0.714188 | 3.4:-91359766 | MS.gene37434:CDS |
| TGTGATTGACCATAAGCAGG+TGG | 0.719303 | 3.4:+91358385 | None:intergenic |
| CCAGGTCCATAACCAGACTG+TGG | 0.734270 | 3.4:+91358445 | None:intergenic |
| GGTAGCCCCTACCTCCCAAG+CGG | 0.739424 | 3.4:-91358482 | MS.gene37434:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATTCAAAATAATTCAATT+AGG | - | chr3.4:91359076-91359095 | MS.gene37434:intron | 15.0% |
| !! | AATTCAATTAGGAATCTTAT+TGG | - | chr3.4:91359087-91359106 | MS.gene37434:intron | 20.0% |
| !! | ATAAACTATCACAATTTACT+GGG | - | chr3.4:91358112-91358131 | MS.gene37434:CDS | 20.0% |
| !! | CAAATATAAAACTTTGTATG+TGG | - | chr3.4:91358710-91358729 | MS.gene37434:CDS | 20.0% |
| !! | TATAAACTATCACAATTTAC+TGG | - | chr3.4:91358111-91358130 | MS.gene37434:CDS | 20.0% |
| !!! | CTTTTGTTTCTCTTTAATTT+GGG | - | chr3.4:91359214-91359233 | MS.gene37434:intron | 20.0% |
| ! | ATGGCTATGATTAAAGAATT+TGG | - | chr3.4:91358306-91358325 | MS.gene37434:CDS | 25.0% |
| ! | CCAAATTAAAGAGAAACAAA+AGG | + | chr3.4:91359216-91359235 | None:intergenic | 25.0% |
| ! | TAAGAACTATTTCCATATGA+CGG | + | chr3.4:91359794-91359813 | None:intergenic | 25.0% |
| ! | TCATATGGAAATAGTTCTTA+TGG | - | chr3.4:91359794-91359813 | MS.gene37434:CDS | 25.0% |
| ! | TTTGTATAAATAAGGCCATT+TGG | - | chr3.4:91359038-91359057 | MS.gene37434:intron | 25.0% |
| !!! | ATTAGGAATCTTATTGGTTT+TGG | - | chr3.4:91359093-91359112 | MS.gene37434:intron | 25.0% |
| !!! | CATTGTTGTGGTTTTATTAT+TGG | - | chr3.4:91358244-91358263 | MS.gene37434:CDS | 25.0% |
| !!! | CCTTTTGTTTCTCTTTAATT+TGG | - | chr3.4:91359213-91359232 | MS.gene37434:intron | 25.0% |
| !!! | GCCTTATTTATACAAACAAA+GGG | + | chr3.4:91359034-91359053 | None:intergenic | 25.0% |
| !!! | TAATTTGTATTGATTAGGAG+CGG | - | chr3.4:91358992-91359011 | MS.gene37434:intron | 25.0% |
| !!! | TGCAGTAATTTGTATTGATT+AGG | - | chr3.4:91358987-91359006 | MS.gene37434:intron | 25.0% |
| !!! | TTAGGAATCTTATTGGTTTT+GGG | - | chr3.4:91359094-91359113 | MS.gene37434:intron | 25.0% |
| ATAAAACTTTGTATGTGGCT+TGG | - | chr3.4:91358715-91358734 | MS.gene37434:CDS | 30.0% | |
| GTACTCAACAGATAAACAAA+TGG | - | chr3.4:91358341-91358360 | MS.gene37434:CDS | 30.0% | |
| TCCTTTCTTTCAAATTCAGA+GGG | + | chr3.4:91358686-91358705 | None:intergenic | 30.0% | |
| ! | GCCCTTTGTTTGTATAAATA+AGG | - | chr3.4:91359030-91359049 | MS.gene37434:intron | 30.0% |
| !! | GGCCTTATTTATACAAACAA+AGG | + | chr3.4:91359035-91359054 | None:intergenic | 30.0% |
| AAAGGTTGTTGATGCAGAAA+TGG | - | chr3.4:91358494-91358513 | MS.gene37434:CDS | 35.0% | |
| AAGAATCAGAACCAAAACTG+TGG | - | chr3.4:91358379-91358398 | MS.gene37434:CDS | 35.0% | |
| ACAGAAAAACATGATGAACC+AGG | - | chr3.4:91358408-91358427 | MS.gene37434:CDS | 35.0% | |
| ACTATCACAATTTACTGGGA+CGG | - | chr3.4:91358116-91358135 | MS.gene37434:CDS | 35.0% | |
| AGTCGCAAGGATAATAGAAT+TGG | - | chr3.4:91358537-91358556 | MS.gene37434:CDS | 35.0% | |
| ATAATGCGCAACAACAATCT+GGG | - | chr3.4:91359273-91359292 | MS.gene37434:intron | 35.0% | |
| CAAACATATGATCAGCAACA+AGG | - | chr3.4:91359308-91359327 | MS.gene37434:CDS | 35.0% | |
| CAATGAAATTTCACCTTCGT+CGG | - | chr3.4:91358470-91358489 | MS.gene37434:CDS | 35.0% | |
| CTCCTTTCTTTCAAATTCAG+AGG | + | chr3.4:91358687-91358706 | None:intergenic | 35.0% | |
| GTCGCAAGGATAATAGAATT+GGG | - | chr3.4:91358538-91358557 | MS.gene37434:CDS | 35.0% | |
| TATAATGCGCAACAACAATC+TGG | - | chr3.4:91359272-91359291 | MS.gene37434:intron | 35.0% | |
| TATGATCAGCAACAAGGTTA+TGG | - | chr3.4:91359314-91359333 | MS.gene37434:CDS | 35.0% | |
| TCCCTCTGAATTTGAAAGAA+AGG | - | chr3.4:91358682-91358701 | MS.gene37434:CDS | 35.0% | |
| TCGCAAGGATAATAGAATTG+GGG | - | chr3.4:91358539-91358558 | MS.gene37434:CDS | 35.0% | |
| TCTTTCAAATTCAGAGGGAA+TGG | + | chr3.4:91358681-91358700 | None:intergenic | 35.0% | |
| TGTTGCTGATCATATGTTTG+TGG | + | chr3.4:91359308-91359327 | None:intergenic | 35.0% | |
| ! | AGAGAAATGTCTTTTCTCTG+AGG | - | chr3.4:91359122-91359141 | MS.gene37434:intron | 35.0% |
| ! | ATTTGGGTTCCTATCAGTTA+TGG | - | chr3.4:91359230-91359249 | MS.gene37434:intron | 35.0% |
| ! | TAAAGAATTTGGAGCACAGA+TGG | - | chr3.4:91358317-91358336 | MS.gene37434:CDS | 35.0% |
| !! | GAAAGAGTATTGAACGAGAA+AGG | - | chr3.4:91358561-91358580 | MS.gene37434:CDS | 35.0% |
| !! | TGACTGGAAGTCATTTTCTA+TGG | - | chr3.4:91358287-91358306 | MS.gene37434:CDS | 35.0% |
| !! | TGTGTTGATTAGAAGCAGTT+AGG | - | chr3.4:91358957-91358976 | MS.gene37434:intron | 35.0% |
| AAACTCCTCAACCAGGTTAT+GGG | - | chr3.4:91359474-91359493 | MS.gene37434:CDS | 40.0% | |
| AATGACTTCCAGTCAGCATA+TGG | + | chr3.4:91358282-91358301 | None:intergenic | 40.0% | |
| AATTTCACCTTCGTCGGAAA+AGG | - | chr3.4:91358476-91358495 | MS.gene37434:CDS | 40.0% | |
| ACTCATGTGATAAGTTGCAG+TGG | - | chr3.4:91358193-91358212 | MS.gene37434:CDS | 40.0% | |
| AGAAAAAGAGAGCAAGAGTG+TGG | - | chr3.4:91358630-91358649 | MS.gene37434:CDS | 40.0% | |
| AGTTATGGTCAGGAAAGCTA+TGG | - | chr3.4:91359245-91359264 | MS.gene37434:intron | 40.0% | |
| ATCTGCTTGTGATCCATAGT+TGG | + | chr3.4:91359393-91359412 | None:intergenic | 40.0% | |
| ATGACTTCCAGTCAGCATAT+GGG | + | chr3.4:91358281-91358300 | None:intergenic | 40.0% | |
| CTCATGTGATAAGTTGCAGT+GGG | - | chr3.4:91358194-91358213 | MS.gene37434:CDS | 40.0% | |
| CTTTCCTGACCATAACTGAT+AGG | + | chr3.4:91359242-91359261 | None:intergenic | 40.0% | |
| GAACTATTTCCATATGACGG+TGG | + | chr3.4:91359791-91359810 | None:intergenic | 40.0% | |
| TGAAACAAAGAAGAGTCGCA+AGG | - | chr3.4:91358524-91358543 | MS.gene37434:CDS | 40.0% | |
| TTGAGGAGTTTCTTGTTGGT+TGG | + | chr3.4:91359465-91359484 | None:intergenic | 40.0% | |
| ! | AAAAAGAGAGCAAGAGTGTG+GGG | - | chr3.4:91358632-91358651 | MS.gene37434:CDS | 40.0% |
| ! | GAAAAAGAGAGCAAGAGTGT+GGG | - | chr3.4:91358631-91358650 | MS.gene37434:CDS | 40.0% |
| ! | TATTGATTAGGAGCGGTTAC+AGG | - | chr3.4:91358999-91359018 | MS.gene37434:intron | 40.0% |
| ! | TCTGTCATCTTCCACAGTTT+TGG | + | chr3.4:91358393-91358412 | None:intergenic | 40.0% |
| ! | TTATGGTGCTAGTTATGCTC+AGG | - | chr3.4:91359811-91359830 | MS.gene37434:CDS | 40.0% |
| !! | AGGATGAAGAAGCATTGTTG+TGG | - | chr3.4:91358232-91358251 | MS.gene37434:CDS | 40.0% |
| !! | AGGTATCTGGTGGTATTGAT+AGG | - | chr3.4:91358857-91358876 | MS.gene37434:intron | 40.0% |
| !! | ATGTGGCTTGGTTGTTTGAA+GGG | - | chr3.4:91358727-91358746 | MS.gene37434:CDS | 40.0% |
| !! | ATTTGCACTTGGCTTTTGAG+AGG | + | chr3.4:91359573-91359592 | None:intergenic | 40.0% |
| !! | GGTATCTGGTGGTATTGATA+GGG | - | chr3.4:91358858-91358877 | MS.gene37434:intron | 40.0% |
| !! | TATGTGGCTTGGTTGTTTGA+AGG | - | chr3.4:91358726-91358745 | MS.gene37434:CDS | 40.0% |
| !! | TTTGCACTTGGCTTTTGAGA+GGG | + | chr3.4:91359572-91359591 | None:intergenic | 40.0% |
| !!! | TTTTGCTCTGGGATTACAGA+GGG | - | chr3.4:91359148-91359167 | MS.gene37434:CDS | 40.0% |
| AAATTCAGAGGGAATGGCTC+CGG | + | chr3.4:91358675-91358694 | None:intergenic | 45.0% | |
| AACTCCTCAACCAGGTTATG+GGG | - | chr3.4:91359475-91359494 | MS.gene37434:CDS | 45.0% | |
| AAGAGAACCCATATGCTGAC+TGG | - | chr3.4:91358271-91358290 | MS.gene37434:CDS | 45.0% | |
| AGTCAACCACAGTCTGGTTA+TGG | - | chr3.4:91359527-91359546 | MS.gene37434:CDS | 45.0% | |
| AGTCAGCATATGGGTTCTCT+TGG | + | chr3.4:91358272-91358291 | None:intergenic | 45.0% | |
| AGTGCAAATCCACCTGCTTA+TGG | - | chr3.4:91359584-91359603 | MS.gene37434:CDS | 45.0% | |
| ATTACTCCCACTGCCATAAC+TGG | + | chr3.4:91359348-91359367 | None:intergenic | 45.0% | |
| CAACAAGAAACTCCTCAACC+AGG | - | chr3.4:91359467-91359486 | MS.gene37434:CDS | 45.0% | |
| CAATCATATGGTGCTCCTCA+AGG | - | chr3.4:91359740-91359759 | MS.gene37434:CDS | 45.0% | |
| CGGTAATGTTAGGTATCTGG+TGG | - | chr3.4:91358847-91358866 | MS.gene37434:intron | 45.0% | |
| CTGGTTGAGGAGTTTCTTGT+TGG | + | chr3.4:91359469-91359488 | None:intergenic | 45.0% | |
| CTTGTCAGGGTTCCAACAAT+GGG | - | chr3.4:91358752-91358771 | MS.gene37434:intron | 45.0% | |
| GAAACTCCTCAACCAGGTTA+TGG | - | chr3.4:91359473-91359492 | MS.gene37434:CDS | 45.0% | |
| GACTGTGATTGACCATAAGC+AGG | + | chr3.4:91359599-91359618 | None:intergenic | 45.0% | |
| GGTCGGTAATGTTAGGTATC+TGG | - | chr3.4:91358844-91358863 | MS.gene37434:intron | 45.0% | |
| GGTTCCTATCAGTTATGGTC+AGG | - | chr3.4:91359235-91359254 | MS.gene37434:intron | 45.0% | |
| GTTTCTTTAACCCAGCCTTG+AGG | - | chr3.4:91358802-91358821 | MS.gene37434:intron | 45.0% | |
| TATGGAAGTCAACCACAGTC+TGG | - | chr3.4:91359521-91359540 | MS.gene37434:CDS | 45.0% | |
| TCTGGTTATGGACCTGGTTA+TGG | - | chr3.4:91359539-91359558 | MS.gene37434:CDS | 45.0% | |
| TGTGATTGACCATAAGCAGG+TGG | + | chr3.4:91359596-91359615 | None:intergenic | 45.0% | |
| TTACTCCCACTGCCATAACT+GGG | + | chr3.4:91359347-91359366 | None:intergenic | 45.0% | |
| TTAGAGAAGACCGTCAACGA+TGG | - | chr3.4:91358432-91358451 | MS.gene37434:CDS | 45.0% | |
| TTCTAGCGGTCGGTAATGTT+AGG | - | chr3.4:91358837-91358856 | MS.gene37434:intron | 45.0% | |
| TTGAATTCCCCCTACTGTTG+TGG | + | chr3.4:91359064-91359083 | None:intergenic | 45.0% | |
| TTGACGGTCTTCTCTAAACC+TGG | + | chr3.4:91358429-91358448 | None:intergenic | 45.0% | |
| ! | ACTAGAATTCTTTTGCCCCC+AGG | + | chr3.4:91358780-91358799 | None:intergenic | 45.0% |
| ! | AGACTGTGGTTGACTTCCAT+AGG | + | chr3.4:91359522-91359541 | None:intergenic | 45.0% |
| ! | TAAGCAGGTGGATTTGCACT+TGG | + | chr3.4:91359584-91359603 | None:intergenic | 45.0% |
| ! | TCAACAACCTTTTCCGACGA+AGG | + | chr3.4:91358486-91358505 | None:intergenic | 45.0% |
| !! | AGTAGTGGGTTGGGAAGTTT+GGG | + | chr3.4:91359420-91359439 | None:intergenic | 45.0% |
| !! | TGAGGAGCACCATATGATTG+CGG | + | chr3.4:91359740-91359759 | None:intergenic | 45.0% |
| !! | TGTGGCTTGGTTGTTTGAAG+GGG | - | chr3.4:91358728-91358747 | MS.gene37434:CDS | 45.0% |
| !!! | CTTTTGCTCTGGGATTACAG+AGG | - | chr3.4:91359147-91359166 | MS.gene37434:CDS | 45.0% |
| !!! | ATTTTAATATATAGTTATTT+AGG | - | chr3.4:91358902-91358921 | MS.gene37434:intron | 5.0% |
| AAGACCGTCAACGATGGAGA+AGG | - | chr3.4:91358438-91358457 | MS.gene37434:CDS | 50.0% | |
| ACTTTAGCAACACTGCCCTG+TGG | + | chr3.4:91359878-91359897 | None:intergenic | 50.0% | |
| ATCCTGCTGGATGGATCACA+AGG | - | chr3.4:91358139-91358158 | MS.gene37434:CDS | 50.0% | |
| CATTTGGCCACAACAGTAGG+GGG | - | chr3.4:91359054-91359073 | MS.gene37434:intron | 50.0% | |
| CCATTTGGCCACAACAGTAG+GGG | - | chr3.4:91359053-91359072 | MS.gene37434:intron | 50.0% | |
| CCTTCCTTCTCCATCGTTGA+CGG | + | chr3.4:91358445-91358464 | None:intergenic | 50.0% | |
| GCCATTTGGCCACAACAGTA+GGG | - | chr3.4:91359052-91359071 | MS.gene37434:intron | 50.0% | |
| GCGCAACAACAATCTGGGTA+TGG | - | chr3.4:91359278-91359297 | MS.gene37434:CDS | 50.0% | |
| GCTCTATGAGTGCCTAACTC+TGG | + | chr3.4:91359695-91359714 | None:intergenic | 50.0% | |
| GCTTGTCAGGGTTCCAACAA+TGG | - | chr3.4:91358751-91358770 | MS.gene37434:intron | 50.0% | |
| GGAGTAATCCAACCCAAGAG+GGG | - | chr3.4:91359360-91359379 | MS.gene37434:CDS | 50.0% | |
| GGATATGCTCAGCCAGAGTT+AGG | - | chr3.4:91359680-91359699 | MS.gene37434:CDS | 50.0% | |
| GGGAGTAATCCAACCCAAGA+GGG | - | chr3.4:91359359-91359378 | MS.gene37434:CDS | 50.0% | |
| GGGTATGGTCCGCAATCATA+TGG | - | chr3.4:91359728-91359747 | MS.gene37434:CDS | 50.0% | |
| GGTTCCAACAATGGGATCCT+GGG | - | chr3.4:91358760-91358779 | MS.gene37434:intron | 50.0% | |
| GTGGGCTTTCATGAGTATGG+AGG | - | chr3.4:91358212-91358231 | MS.gene37434:CDS | 50.0% | |
| GTTCCAACAATGGGATCCTG+GGG | - | chr3.4:91358761-91358780 | MS.gene37434:intron | 50.0% | |
| TATGATTGCGGACCATACCC+TGG | + | chr3.4:91359728-91359747 | None:intergenic | 50.0% | |
| TCATATGGTGCTCCTCAAGG+TGG | - | chr3.4:91359743-91359762 | MS.gene37434:CDS | 50.0% | |
| TCCTGCTGGATGGATCACAA+GGG | - | chr3.4:91358140-91358159 | MS.gene37434:CDS | 50.0% | |
| TCTGGCTGAGCATATCCAGA+AGG | + | chr3.4:91359677-91359696 | None:intergenic | 50.0% | |
| TGATTAGGAGCGGTTACAGG+CGG | - | chr3.4:91359002-91359021 | MS.gene37434:intron | 50.0% | |
| TGGGAGTAATCCAACCCAAG+AGG | - | chr3.4:91359358-91359377 | MS.gene37434:CDS | 50.0% | |
| TGTTTGAAGGGGGCTTGTCA+GGG | - | chr3.4:91358739-91358758 | MS.gene37434:intron | 50.0% | |
| TTAACCCAGCCTTGAGGACA+AGG | - | chr3.4:91358808-91358827 | MS.gene37434:intron | 50.0% | |
| TTCCAACAATGGGATCCTGG+GGG | - | chr3.4:91358762-91358781 | MS.gene37434:intron | 50.0% | |
| TTCCATATGACGGTGGAGTC+TGG | + | chr3.4:91359784-91359803 | None:intergenic | 50.0% | |
| TTGACTTCCATAGGCCGCTT+GGG | + | chr3.4:91359513-91359532 | None:intergenic | 50.0% | |
| TTGTTTGAAGGGGGCTTGTC+AGG | - | chr3.4:91358738-91358757 | MS.gene37434:intron | 50.0% | |
| ! | ATAGAGCACCAGTGCAACCA+GGG | - | chr3.4:91359708-91359727 | MS.gene37434:CDS | 50.0% |
| ! | GAAACACAGCCTTGTCCTCA+AGG | + | chr3.4:91358820-91358839 | None:intergenic | 50.0% |
| ! | GCAGTGGGCTTTCATGAGTA+TGG | - | chr3.4:91358209-91358228 | MS.gene37434:CDS | 50.0% |
| ! | TATGGCTCTGCTCCCAGTTA+TGG | - | chr3.4:91359332-91359351 | MS.gene37434:CDS | 50.0% |
| !! | AAGGCTGTGTTTCTAGCGGT+CGG | - | chr3.4:91358827-91358846 | MS.gene37434:intron | 50.0% |
| !! | CAGTAGTGGGTTGGGAAGTT+TGG | + | chr3.4:91359421-91359440 | None:intergenic | 50.0% |
| !! | CTCTGAGGAGCTTTTGCTCT+GGG | - | chr3.4:91359137-91359156 | MS.gene37434:intron | 50.0% |
| !! | GGACAAGGCTGTGTTTCTAG+CGG | - | chr3.4:91358823-91358842 | MS.gene37434:intron | 50.0% |
| !! | GTGGCTTGGTTGTTTGAAGG+GGG | - | chr3.4:91358729-91358748 | MS.gene37434:CDS | 50.0% |
| !! | GTTGGTAGCATAGCCTTGCT+GGG | + | chr3.4:91359447-91359466 | None:intergenic | 50.0% |
| !! | TCTCTGAGGAGCTTTTGCTC+TGG | - | chr3.4:91359136-91359155 | MS.gene37434:intron | 50.0% |
| AACTGCACAGGCTGTTCCAC+AGG | - | chr3.4:91359859-91359878 | MS.gene37434:CDS | 55.0% | |
| ACTGACCATAGCCTCCTGCT+GGG | + | chr3.4:91359628-91359647 | None:intergenic | 55.0% | |
| ACTGCACAGGCTGTTCCACA+GGG | - | chr3.4:91359860-91359879 | MS.gene37434:CDS | 55.0% | |
| CCACAGTCTGGTTATGGACC+TGG | - | chr3.4:91359533-91359552 | MS.gene37434:CDS | 55.0% | |
| CCAGGTCCATAACCAGACTG+TGG | + | chr3.4:91359536-91359555 | None:intergenic | 55.0% | |
| CCCCTACTGTTGTGGCCAAA+TGG | + | chr3.4:91359056-91359075 | None:intergenic | 55.0% | |
| CCGTCAACGATGGAGAAGGA+AGG | - | chr3.4:91358442-91358461 | MS.gene37434:CDS | 55.0% | |
| CCTTGCTGGGCAACAGTAGT+GGG | + | chr3.4:91359434-91359453 | None:intergenic | 55.0% | |
| CTGAGCATATCCAGAAGGCG+GGG | + | chr3.4:91359672-91359691 | None:intergenic | 55.0% | |
| CTGCTCCCAGTTATGGCAGT+GGG | - | chr3.4:91359339-91359358 | MS.gene37434:CDS | 55.0% | |
| GCTACCCCATAACCTGGTTG+AGG | + | chr3.4:91359482-91359501 | None:intergenic | 55.0% | |
| GCTGAGCATATCCAGAAGGC+GGG | + | chr3.4:91359673-91359692 | None:intergenic | 55.0% | |
| GGCCATTTGGCCACAACAGT+AGG | - | chr3.4:91359051-91359070 | MS.gene37434:intron | 55.0% | |
| GGCTGAGCATATCCAGAAGG+CGG | + | chr3.4:91359674-91359693 | None:intergenic | 55.0% | |
| GGGTTCCAACAATGGGATCC+TGG | - | chr3.4:91358759-91358778 | MS.gene37434:intron | 55.0% | |
| GTCAGCATATCCCTCTAGCC+AGG | - | chr3.4:91359646-91359665 | MS.gene37434:CDS | 55.0% | |
| TAGCGATGGAGCAACTGCAC+AGG | - | chr3.4:91359847-91359866 | MS.gene37434:CDS | 55.0% | |
| TCTGCTCCCAGTTATGGCAG+TGG | - | chr3.4:91359338-91359357 | MS.gene37434:CDS | 55.0% | |
| TTTACTGGGACGGATCCTGC+TGG | - | chr3.4:91358126-91358145 | MS.gene37434:CDS | 55.0% | |
| ! | ACAGCCTTGTCCTCAAGGCT+GGG | + | chr3.4:91358815-91358834 | None:intergenic | 55.0% |
| ! | AGTTGGAAGTGTGCCCCTCT+TGG | + | chr3.4:91359376-91359395 | None:intergenic | 55.0% |
| ! | CATAGAGCACCAGTGCAACC+AGG | - | chr3.4:91359707-91359726 | MS.gene37434:CDS | 55.0% |
| ! | GAGGGGCACACTTCCAACTA+TGG | - | chr3.4:91359377-91359396 | MS.gene37434:CDS | 55.0% |
| ! | GTTGACTTCCATAGGCCGCT+TGG | + | chr3.4:91359514-91359533 | None:intergenic | 55.0% |
| ! | GTTGGAAGTGTGCCCCTCTT+GGG | + | chr3.4:91359375-91359394 | None:intergenic | 55.0% |
| !! | AGTGGGTTGGGAAGTTTGGG+AGG | + | chr3.4:91359417-91359436 | None:intergenic | 55.0% |
| !! | CTGGGCAACAGTAGTGGGTT+GGG | + | chr3.4:91359429-91359448 | None:intergenic | 55.0% |
| !! | GCACTTGGCTTTTGAGAGGG+AGG | + | chr3.4:91359569-91359588 | None:intergenic | 55.0% |
| !! | GGTTGGTAGCATAGCCTTGC+TGG | + | chr3.4:91359448-91359467 | None:intergenic | 55.0% |
| ACTTCCATAGGCCGCTTGGG+AGG | + | chr3.4:91359510-91359529 | None:intergenic | 60.0% | |
| ATAGGCCGCTTGGGAGGTAG+GGG | + | chr3.4:91359504-91359523 | None:intergenic | 60.0% | |
| CAAGGTGGCCAGCCTAGCTA+TGG | - | chr3.4:91359758-91359777 | MS.gene37434:CDS | 60.0% | |
| CATAGGCCGCTTGGGAGGTA+GGG | + | chr3.4:91359505-91359524 | None:intergenic | 60.0% | |
| CCCACTACTGTTGCCCAGCA+AGG | - | chr3.4:91359431-91359450 | MS.gene37434:CDS | 60.0% | |
| GAAGTGTGCCCCTCTTGGGT+TGG | + | chr3.4:91359371-91359390 | None:intergenic | 60.0% | |
| GACTGACCATAGCCTCCTGC+TGG | + | chr3.4:91359629-91359648 | None:intergenic | 60.0% | |
| GAGTCTGGCCATAGCTAGGC+TGG | + | chr3.4:91359769-91359788 | None:intergenic | 60.0% | |
| GCACCAGTGCAACCAGGGTA+TGG | - | chr3.4:91359713-91359732 | MS.gene37434:CDS | 60.0% | |
| GCCCTTGTGATCCATCCAGC+AGG | + | chr3.4:91358144-91358163 | None:intergenic | 60.0% | |
| GCCTTGCTGGGCAACAGTAG+TGG | + | chr3.4:91359435-91359454 | None:intergenic | 60.0% | |
| GCTCCAGCGTATGCTAGCGA+TGG | - | chr3.4:91359833-91359852 | MS.gene37434:CDS | 60.0% | |
| GCTCCATCGCTAGCATACGC+TGG | + | chr3.4:91359839-91359858 | None:intergenic | 60.0% | |
| GGACCATACCCTGGTTGCAC+TGG | + | chr3.4:91359719-91359738 | None:intergenic | 60.0% | |
| GGCCAGACTCCACCGTCATA+TGG | - | chr3.4:91359779-91359798 | MS.gene37434:CDS | 60.0% | |
| GGTGGAGTCTGGCCATAGCT+AGG | + | chr3.4:91359773-91359792 | None:intergenic | 60.0% | |
| GTAGGGGCTACCCCATAACC+TGG | + | chr3.4:91359488-91359507 | None:intergenic | 60.0% | |
| TCACAGTCACCTAGCCCAGC+AGG | - | chr3.4:91359611-91359630 | MS.gene37434:CDS | 60.0% | |
| TGCCCCCAGGATCCCATTGT+TGG | + | chr3.4:91358767-91358786 | None:intergenic | 60.0% | |
| TTCAGAGGGAATGGCTCCGG+CGG | + | chr3.4:91358672-91358691 | None:intergenic | 60.0% | |
| ! | CACAGCCTTGTCCTCAAGGC+TGG | + | chr3.4:91358816-91358835 | None:intergenic | 60.0% |
| ! | TAGCTAGGCTGGCCACCTTG+AGG | + | chr3.4:91359758-91359777 | None:intergenic | 60.0% |
| !! | GAGGGAGGAGCACCATAACC+AGG | + | chr3.4:91359554-91359573 | None:intergenic | 60.0% |
| !! | GCTGGGCAACAGTAGTGGGT+TGG | + | chr3.4:91359430-91359449 | None:intergenic | 60.0% |
| AATGGCTCCGGCGGTGGTTG+TGG | + | chr3.4:91358663-91358682 | None:intergenic | 65.0% | |
| ATGGCTCCGGCGGTGGTTGT+GGG | + | chr3.4:91358662-91358681 | None:intergenic | 65.0% | |
| CAGTCACCTAGCCCAGCAGG+AGG | - | chr3.4:91359614-91359633 | MS.gene37434:CDS | 65.0% | |
| CATATCCAGAAGGCGGGGCC+TGG | + | chr3.4:91359667-91359686 | None:intergenic | 65.0% | |
| CCATAGCCTCCTGCTGGGCT+AGG | + | chr3.4:91359623-91359642 | None:intergenic | 65.0% | |
| CCATAGGCCGCTTGGGAGGT+AGG | + | chr3.4:91359506-91359525 | None:intergenic | 65.0% | |
| CCTACCTCCCAAGCGGCCTA+TGG | - | chr3.4:91359503-91359522 | MS.gene37434:CDS | 65.0% | |
| CCTAGCCCAGCAGGAGGCTA+TGG | - | chr3.4:91359620-91359639 | MS.gene37434:CDS | 65.0% | |
| CTGGGACGGATCCTGCTGGA+TGG | - | chr3.4:91358130-91358149 | MS.gene37434:CDS | 65.0% | |
| GGTAGCCCCTACCTCCCAAG+CGG | - | chr3.4:91359496-91359515 | MS.gene37434:CDS | 65.0% | |
| GGTCTACCCACAACCACCGC+CGG | - | chr3.4:91358653-91358672 | MS.gene37434:CDS | 65.0% | |
| AGAAGGCGGGGCCTGGCTAG+AGG | + | chr3.4:91359660-91359679 | None:intergenic | 70.0% | |
| AGAGGGAATGGCTCCGGCGG+TGG | + | chr3.4:91358669-91358688 | None:intergenic | 70.0% | |
| GAAGGCGGGGCCTGGCTAGA+GGG | + | chr3.4:91359659-91359678 | None:intergenic | 70.0% | |
| TCTAGCCAGGCCCCGCCTTC+TGG | - | chr3.4:91359659-91359678 | MS.gene37434:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 91358087 | 91359913 | 91358087 | ID=MS.gene37434 |
| chr3.4 | mRNA | 91358087 | 91359913 | 91358087 | ID=MS.gene37434.t1;Parent=MS.gene37434 |
| chr3.4 | exon | 91359276 | 91359913 | 91359276 | ID=MS.gene37434.t1.exon1;Parent=MS.gene37434.t1 |
| chr3.4 | CDS | 91359276 | 91359913 | 91359276 | ID=cds.MS.gene37434.t1;Parent=MS.gene37434.t1 |
| chr3.4 | exon | 91359142 | 91359183 | 91359142 | ID=MS.gene37434.t1.exon2;Parent=MS.gene37434.t1 |
| chr3.4 | CDS | 91359142 | 91359183 | 91359142 | ID=cds.MS.gene37434.t1;Parent=MS.gene37434.t1 |
| chr3.4 | exon | 91358087 | 91358753 | 91358087 | ID=MS.gene37434.t1.exon3;Parent=MS.gene37434.t1 |
| chr3.4 | CDS | 91358087 | 91358753 | 91358087 | ID=cds.MS.gene37434.t1;Parent=MS.gene37434.t1 |
| Gene Sequence |
| Protein sequence |
