Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40815.t1 | XP_003591185.1 | 94.3 | 352 | 20 | 0 | 1 | 352 | 1 | 352 | 2.00E-193 | 684.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40815.t1 | Q0WRB2 | 68.8 | 353 | 106 | 2 | 1 | 349 | 1 | 353 | 3.2e-147 | 522.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40815.t1 | Q2HW33 | 94.3 | 352 | 20 | 0 | 1 | 352 | 1 | 352 | 1.4e-193 | 684.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene40815 | 0.800821 | 1.20E-48 | -1.69E-46 |
| MS.gene049669 | MS.gene40815 | 0.802883 | 4.54E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene40815 | -0.800352 | 1.50E-48 | -1.69E-46 |
| MS.gene050623 | MS.gene40815 | -0.802121 | 6.52E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene40815 | 0.823909 | 1.07E-53 | -1.69E-46 |
| MS.gene050750 | MS.gene40815 | 0.803338 | 3.66E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene40815 | 0.804665 | 1.94E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene40815 | 0.825563 | 4.38E-54 | -1.69E-46 |
| MS.gene051983 | MS.gene40815 | 0.819937 | 8.93E-53 | -1.69E-46 |
| MS.gene052176 | MS.gene40815 | 0.855974 | 4.40E-62 | -1.69E-46 |
| MS.gene052309 | MS.gene40815 | -0.853779 | 1.91E-61 | -1.69E-46 |
| MS.gene052389 | MS.gene40815 | 0.8228 | 1.95E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene40815 | 0.800814 | 1.21E-48 | -1.69E-46 |
| MS.gene055701 | MS.gene40815 | 0.808413 | 3.14E-50 | -1.69E-46 |
| MS.gene056087 | MS.gene40815 | 0.985557 | 6.13E-164 | -1.69E-46 |
| MS.gene056506 | MS.gene40815 | 0.803816 | 2.91E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene40815 | 0.812625 | 3.86E-51 | -1.69E-46 |
| MS.gene057079 | MS.gene40815 | 0.813486 | 2.50E-51 | -1.69E-46 |
| MS.gene05761 | MS.gene40815 | 0.807598 | 4.67E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene40815 | 0.8102 | 1.30E-50 | -1.69E-46 |
| MS.gene059511 | MS.gene40815 | 0.807889 | 4.05E-50 | -1.69E-46 |
| MS.gene060297 | MS.gene40815 | 0.818527 | 1.87E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene40815 | -0.831621 | 1.50E-55 | -1.69E-46 |
| MS.gene061114 | MS.gene40815 | -0.831318 | 1.79E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40815 | MS.gene012318 | PPI |
| MS.gene40815 | MS.gene96326 | PPI |
| MS.gene40815 | MS.gene073336 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40815.t1 | MTR_1g083690 | 94.318 | 352 | 20 | 0 | 1 | 352 | 1 | 352 | 0.0 | 676 |
| MS.gene40815.t1 | MTR_7g112490 | 76.033 | 363 | 76 | 5 | 1 | 352 | 1 | 363 | 0.0 | 578 |
| MS.gene40815.t1 | MTR_7g112490 | 76.033 | 363 | 76 | 5 | 1 | 352 | 19 | 381 | 0.0 | 578 |
| MS.gene40815.t1 | MTR_2g435550 | 59.718 | 355 | 140 | 1 | 1 | 352 | 1 | 355 | 7.84e-166 | 467 |
| MS.gene40815.t1 | MTR_2g435550 | 63.303 | 327 | 120 | 0 | 26 | 352 | 15 | 341 | 9.00e-166 | 466 |
| MS.gene40815.t1 | MTR_4g120410 | 59.773 | 353 | 140 | 1 | 1 | 351 | 1 | 353 | 1.51e-165 | 466 |
| MS.gene40815.t1 | MTR_2g435550 | 62.745 | 306 | 114 | 0 | 26 | 331 | 29 | 334 | 7.90e-153 | 435 |
| MS.gene40815.t1 | MTR_7g080170 | 48.673 | 339 | 147 | 1 | 39 | 350 | 46 | 384 | 5.43e-112 | 335 |
| MS.gene40815.t1 | MTR_8g017240 | 50.820 | 305 | 142 | 3 | 48 | 352 | 45 | 341 | 2.63e-106 | 316 |
| MS.gene40815.t1 | MTR_7g021530 | 47.222 | 324 | 151 | 3 | 48 | 352 | 47 | 369 | 9.59e-103 | 308 |
| MS.gene40815.t1 | MTR_4g037470 | 44.379 | 338 | 172 | 5 | 27 | 350 | 35 | 370 | 2.43e-102 | 310 |
| MS.gene40815.t1 | MTR_7g021530 | 47.222 | 324 | 151 | 3 | 48 | 352 | 88 | 410 | 3.17e-102 | 308 |
| MS.gene40815.t1 | MTR_2g090190 | 47.419 | 310 | 150 | 3 | 53 | 350 | 55 | 363 | 1.94e-100 | 305 |
| MS.gene40815.t1 | MTR_4g037470 | 43.228 | 347 | 172 | 6 | 27 | 350 | 35 | 379 | 1.52e-99 | 303 |
| MS.gene40815.t1 | MTR_7g070510 | 44.654 | 318 | 163 | 3 | 45 | 350 | 48 | 364 | 1.77e-98 | 299 |
| MS.gene40815.t1 | MTR_4g013295 | 45.048 | 313 | 164 | 4 | 45 | 351 | 34 | 344 | 7.66e-97 | 291 |
| MS.gene40815.t1 | MTR_7g021530 | 46.284 | 296 | 139 | 3 | 76 | 352 | 25 | 319 | 1.75e-89 | 273 |
| MS.gene40815.t1 | MTR_7g021530 | 48.175 | 274 | 123 | 2 | 48 | 302 | 47 | 320 | 1.26e-86 | 264 |
| MS.gene40815.t1 | MTR_7g021530 | 48.175 | 274 | 123 | 2 | 48 | 302 | 88 | 361 | 5.00e-86 | 264 |
| MS.gene40815.t1 | MTR_7g080170 | 54.626 | 227 | 100 | 1 | 124 | 350 | 53 | 276 | 1.61e-82 | 256 |
| MS.gene40815.t1 | MTR_1g016620 | 44.898 | 294 | 160 | 2 | 58 | 351 | 38 | 329 | 4.56e-79 | 246 |
| MS.gene40815.t1 | MTR_7g021530 | 42.487 | 193 | 92 | 2 | 48 | 221 | 47 | 239 | 7.99e-47 | 160 |
| MS.gene40815.t1 | MTR_7g021530 | 42.487 | 193 | 92 | 2 | 48 | 221 | 88 | 280 | 2.34e-46 | 160 |
| MS.gene40815.t1 | MTR_6g087000 | 29.560 | 318 | 175 | 7 | 60 | 352 | 90 | 383 | 2.37e-33 | 131 |
| MS.gene40815.t1 | MTR_6g087000 | 29.560 | 318 | 175 | 7 | 60 | 352 | 90 | 383 | 3.19e-33 | 131 |
| MS.gene40815.t1 | MTR_4g118340 | 29.032 | 279 | 157 | 6 | 71 | 331 | 68 | 323 | 2.97e-29 | 116 |
| MS.gene40815.t1 | MTR_3g105730 | 32.950 | 261 | 127 | 11 | 91 | 350 | 45 | 258 | 5.28e-28 | 110 |
| MS.gene40815.t1 | MTR_3g105730 | 32.950 | 261 | 127 | 11 | 91 | 350 | 67 | 280 | 6.20e-28 | 111 |
| MS.gene40815.t1 | MTR_2g020970 | 30.124 | 322 | 172 | 12 | 54 | 348 | 44 | 339 | 6.69e-27 | 109 |
| MS.gene40815.t1 | MTR_2g020970 | 31.597 | 288 | 146 | 10 | 55 | 315 | 45 | 308 | 9.04e-27 | 110 |
| MS.gene40815.t1 | MTR_1g014640 | 32.950 | 261 | 127 | 12 | 91 | 350 | 110 | 323 | 4.80e-26 | 106 |
| MS.gene40815.t1 | MTR_1g013400 | 32.950 | 261 | 127 | 12 | 91 | 350 | 110 | 323 | 4.80e-26 | 106 |
| MS.gene40815.t1 | MTR_2g078760 | 35.878 | 262 | 118 | 13 | 89 | 348 | 38 | 251 | 1.46e-25 | 103 |
| MS.gene40815.t1 | MTR_8g463130 | 34.409 | 279 | 131 | 14 | 77 | 351 | 24 | 254 | 3.23e-25 | 102 |
| MS.gene40815.t1 | MTR_8g463130 | 34.409 | 279 | 131 | 14 | 77 | 351 | 52 | 282 | 3.24e-25 | 103 |
| MS.gene40815.t1 | MTR_2g078760 | 36.154 | 260 | 116 | 13 | 91 | 348 | 119 | 330 | 6.90e-25 | 103 |
| MS.gene40815.t1 | MTR_5g009370 | 32.714 | 269 | 130 | 9 | 55 | 312 | 52 | 280 | 2.59e-24 | 102 |
| MS.gene40815.t1 | MTR_3g068200 | 31.646 | 316 | 181 | 11 | 3 | 310 | 33 | 321 | 1.64e-22 | 97.8 |
| MS.gene40815.t1 | MTR_1g115570 | 31.056 | 322 | 163 | 15 | 18 | 327 | 47 | 321 | 2.73e-22 | 96.7 |
| MS.gene40815.t1 | MTR_4g094542 | 34.634 | 205 | 106 | 9 | 148 | 350 | 186 | 364 | 6.25e-22 | 95.9 |
| MS.gene40815.t1 | MTR_6g081850 | 29.927 | 274 | 140 | 9 | 92 | 350 | 82 | 318 | 8.31e-22 | 94.7 |
| MS.gene40815.t1 | MTR_5g080680 | 31.890 | 254 | 130 | 9 | 66 | 310 | 109 | 328 | 3.99e-21 | 94.0 |
| MS.gene40815.t1 | MTR_3g104710 | 31.679 | 262 | 131 | 9 | 57 | 309 | 262 | 484 | 7.22e-21 | 94.0 |
| MS.gene40815.t1 | MTR_2g008850 | 38.889 | 180 | 84 | 9 | 173 | 350 | 79 | 234 | 2.30e-20 | 89.0 |
| MS.gene40815.t1 | MTR_2g008850 | 38.889 | 180 | 84 | 9 | 173 | 350 | 125 | 280 | 6.97e-20 | 88.6 |
| MS.gene40815.t1 | MTR_4g125810 | 33.484 | 221 | 119 | 8 | 89 | 309 | 253 | 445 | 7.44e-20 | 90.9 |
| MS.gene40815.t1 | MTR_1g050520 | 27.797 | 295 | 166 | 13 | 62 | 350 | 391 | 644 | 3.88e-19 | 89.0 |
| MS.gene40815.t1 | MTR_5g063940 | 38.122 | 181 | 84 | 10 | 173 | 350 | 79 | 234 | 5.88e-19 | 85.1 |
| MS.gene40815.t1 | MTR_3g464700 | 32.400 | 250 | 129 | 9 | 60 | 309 | 89 | 298 | 7.33e-19 | 86.7 |
| MS.gene40815.t1 | MTR_1g015110 | 33.036 | 224 | 122 | 9 | 89 | 309 | 290 | 488 | 7.53e-19 | 88.2 |
| MS.gene40815.t1 | MTR_5g063940 | 38.122 | 181 | 84 | 10 | 173 | 350 | 126 | 281 | 8.88e-19 | 85.5 |
| MS.gene40815.t1 | MTR_3g074610 | 37.778 | 180 | 86 | 8 | 173 | 350 | 126 | 281 | 9.51e-19 | 85.5 |
| MS.gene40815.t1 | MTR_4g094208 | 34.444 | 180 | 92 | 7 | 173 | 350 | 121 | 276 | 2.59e-18 | 84.3 |
| MS.gene40815.t1 | MTR_3g464650 | 30.068 | 296 | 152 | 13 | 60 | 348 | 65 | 312 | 5.50e-18 | 84.0 |
| MS.gene40815.t1 | MTR_8g102550 | 30.317 | 221 | 122 | 7 | 89 | 309 | 152 | 340 | 2.25e-17 | 83.2 |
| MS.gene40815.t1 | MTR_3g091060 | 28.626 | 262 | 139 | 9 | 91 | 351 | 127 | 341 | 3.16e-17 | 82.4 |
| MS.gene40815.t1 | MTR_1g028300 | 34.685 | 222 | 109 | 8 | 89 | 310 | 145 | 330 | 3.49e-17 | 82.4 |
| MS.gene40815.t1 | MTR_5g071550 | 28.283 | 297 | 172 | 10 | 52 | 348 | 117 | 372 | 2.11e-16 | 80.1 |
| MS.gene40815.t1 | MTR_4g116420 | 28.315 | 279 | 147 | 13 | 83 | 352 | 118 | 352 | 2.50e-16 | 79.7 |
| MS.gene40815.t1 | MTR_3g107880 | 29.200 | 250 | 127 | 10 | 89 | 328 | 63 | 272 | 4.29e-16 | 78.6 |
| MS.gene40815.t1 | MTR_3g107880 | 29.200 | 250 | 127 | 10 | 89 | 328 | 121 | 330 | 1.19e-15 | 77.8 |
| MS.gene40815.t1 | MTR_3g107880 | 29.200 | 250 | 127 | 10 | 89 | 328 | 120 | 329 | 1.24e-15 | 77.8 |
| MS.gene40815.t1 | MTR_1g086350 | 30.837 | 227 | 120 | 11 | 89 | 310 | 102 | 296 | 2.02e-15 | 77.0 |
| MS.gene40815.t1 | MTR_1g086350 | 30.837 | 227 | 120 | 11 | 89 | 310 | 118 | 312 | 2.54e-15 | 76.6 |
| MS.gene40815.t1 | MTR_2g078760 | 33.486 | 218 | 102 | 11 | 85 | 300 | 113 | 289 | 3.31e-15 | 75.5 |
| MS.gene40815.t1 | MTR_1g086350 | 33.333 | 144 | 73 | 4 | 172 | 310 | 85 | 210 | 2.46e-14 | 72.8 |
| MS.gene40815.t1 | MTR_7g090530 | 28.758 | 306 | 153 | 14 | 86 | 350 | 66 | 347 | 2.95e-14 | 73.9 |
| MS.gene40815.t1 | MTR_2g040500 | 27.273 | 297 | 157 | 10 | 89 | 352 | 267 | 537 | 3.86e-14 | 73.9 |
| MS.gene40815.t1 | MTR_4g007440 | 33.121 | 157 | 76 | 5 | 173 | 318 | 160 | 298 | 6.77e-13 | 69.3 |
| MS.gene40815.t1 | MTR_5g024340 | 29.515 | 227 | 113 | 9 | 89 | 310 | 124 | 308 | 1.29e-12 | 68.6 |
| MS.gene40815.t1 | MTR_3g105880 | 32.653 | 147 | 73 | 4 | 172 | 310 | 159 | 287 | 1.61e-12 | 67.8 |
| MS.gene40815.t1 | MTR_3g105880 | 32.653 | 147 | 73 | 4 | 172 | 310 | 159 | 287 | 1.70e-12 | 68.2 |
| MS.gene40815.t1 | MTR_7g029240 | 34.965 | 143 | 82 | 6 | 165 | 304 | 128 | 262 | 1.72e-12 | 68.6 |
| MS.gene40815.t1 | MTR_3g032660 | 26.148 | 283 | 161 | 11 | 86 | 345 | 65 | 322 | 3.13e-12 | 67.8 |
| MS.gene40815.t1 | MTR_3g032700 | 26.148 | 283 | 161 | 11 | 86 | 345 | 65 | 322 | 5.24e-12 | 67.0 |
| MS.gene40815.t1 | MTR_4g119830 | 27.413 | 259 | 115 | 8 | 79 | 312 | 222 | 432 | 5.67e-12 | 67.0 |
| MS.gene40815.t1 | MTR_4g123080 | 25.862 | 290 | 166 | 12 | 56 | 328 | 54 | 311 | 6.15e-12 | 66.6 |
| MS.gene40815.t1 | MTR_2g033000 | 26.400 | 250 | 141 | 9 | 89 | 328 | 100 | 316 | 8.82e-12 | 65.9 |
| MS.gene40815.t1 | MTR_4g123080 | 25.862 | 290 | 166 | 12 | 56 | 328 | 72 | 329 | 8.87e-12 | 66.2 |
| MS.gene40815.t1 | MTR_1g067210 | 27.660 | 282 | 154 | 13 | 89 | 346 | 76 | 331 | 1.60e-11 | 65.5 |
| MS.gene40815.t1 | MTR_1g014190 | 30.612 | 147 | 76 | 4 | 172 | 310 | 159 | 287 | 1.74e-11 | 65.1 |
| MS.gene40815.t1 | MTR_1g014190 | 30.612 | 147 | 76 | 4 | 172 | 310 | 197 | 325 | 1.83e-11 | 65.1 |
| MS.gene40815.t1 | MTR_8g074930 | 29.187 | 209 | 95 | 11 | 183 | 350 | 45 | 241 | 2.37e-11 | 63.9 |
| MS.gene40815.t1 | MTR_1g116260 | 26.761 | 284 | 154 | 14 | 89 | 346 | 80 | 335 | 7.47e-11 | 63.2 |
| MS.gene40815.t1 | MTR_1g112840 | 27.000 | 300 | 156 | 14 | 89 | 350 | 81 | 355 | 8.65e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40815.t1 | AT5G27930 | 68.839 | 353 | 106 | 2 | 1 | 349 | 1 | 353 | 0.0 | 538 |
| MS.gene40815.t1 | AT5G27930 | 68.839 | 353 | 106 | 2 | 1 | 349 | 1 | 353 | 0.0 | 538 |
| MS.gene40815.t1 | AT3G05640 | 68.732 | 355 | 102 | 2 | 1 | 351 | 1 | 350 | 0.0 | 531 |
| MS.gene40815.t1 | AT3G05640 | 68.732 | 355 | 102 | 2 | 1 | 351 | 1 | 350 | 0.0 | 531 |
| MS.gene40815.t1 | AT3G05640 | 68.732 | 355 | 102 | 2 | 1 | 351 | 1 | 350 | 0.0 | 531 |
| MS.gene40815.t1 | AT5G27930 | 69.435 | 301 | 88 | 2 | 1 | 297 | 1 | 301 | 3.30e-165 | 464 |
| MS.gene40815.t1 | AT3G16800 | 54.213 | 356 | 151 | 3 | 1 | 351 | 1 | 349 | 6.05e-140 | 401 |
| MS.gene40815.t1 | AT3G16800 | 54.213 | 356 | 151 | 3 | 1 | 351 | 1 | 349 | 6.05e-140 | 401 |
| MS.gene40815.t1 | AT3G16800 | 54.213 | 356 | 151 | 3 | 1 | 351 | 1 | 349 | 6.05e-140 | 401 |
| MS.gene40815.t1 | AT3G16800 | 58.238 | 261 | 101 | 2 | 92 | 351 | 1 | 254 | 3.52e-108 | 317 |
| MS.gene40815.t1 | AT3G16800 | 58.238 | 261 | 101 | 2 | 92 | 351 | 1 | 254 | 3.52e-108 | 317 |
| MS.gene40815.t1 | AT1G79630 | 45.058 | 344 | 149 | 2 | 48 | 351 | 57 | 400 | 1.03e-106 | 322 |
| MS.gene40815.t1 | AT1G79630 | 45.058 | 344 | 149 | 2 | 48 | 351 | 53 | 396 | 1.41e-106 | 321 |
| MS.gene40815.t1 | AT5G36250 | 46.951 | 328 | 149 | 1 | 48 | 350 | 57 | 384 | 2.12e-106 | 319 |
| MS.gene40815.t1 | AT3G02750 | 43.536 | 379 | 172 | 3 | 12 | 352 | 21 | 395 | 3.68e-105 | 317 |
| MS.gene40815.t1 | AT3G02750 | 43.536 | 379 | 172 | 3 | 12 | 352 | 21 | 395 | 3.68e-105 | 317 |
| MS.gene40815.t1 | AT1G16220 | 47.335 | 319 | 148 | 4 | 53 | 351 | 59 | 377 | 1.08e-103 | 313 |
| MS.gene40815.t1 | AT5G36250 | 45.322 | 342 | 148 | 2 | 48 | 350 | 57 | 398 | 2.16e-102 | 309 |
| MS.gene40815.t1 | AT3G02750 | 39.855 | 414 | 172 | 4 | 12 | 352 | 21 | 430 | 1.96e-97 | 299 |
| MS.gene40815.t1 | AT1G03590 | 44.272 | 323 | 164 | 4 | 41 | 350 | 43 | 362 | 4.70e-97 | 296 |
| MS.gene40815.t1 | AT1G79630 | 45.367 | 313 | 131 | 2 | 79 | 351 | 18 | 330 | 6.21e-97 | 295 |
| MS.gene40815.t1 | AT1G79630 | 45.367 | 313 | 131 | 2 | 79 | 351 | 18 | 330 | 6.21e-97 | 295 |
| MS.gene40815.t1 | AT4G03415 | 46.711 | 304 | 147 | 3 | 61 | 350 | 70 | 372 | 1.00e-96 | 295 |
| MS.gene40815.t1 | AT4G03415 | 46.711 | 304 | 147 | 3 | 61 | 350 | 70 | 372 | 1.00e-96 | 295 |
| MS.gene40815.t1 | AT4G03415 | 46.711 | 304 | 147 | 3 | 61 | 350 | 70 | 372 | 1.00e-96 | 295 |
| MS.gene40815.t1 | AT5G01700 | 45.779 | 308 | 163 | 3 | 45 | 351 | 34 | 338 | 1.96e-94 | 286 |
| MS.gene40815.t1 | AT5G01700 | 47.059 | 289 | 149 | 3 | 64 | 351 | 4 | 289 | 7.23e-93 | 281 |
| MS.gene40815.t1 | AT5G36250 | 47.766 | 291 | 126 | 2 | 48 | 312 | 57 | 347 | 1.79e-91 | 278 |
| MS.gene40815.t1 | AT1G79630 | 56.098 | 205 | 90 | 0 | 147 | 351 | 86 | 290 | 7.21e-84 | 259 |
| MS.gene40815.t1 | AT1G79630 | 56.098 | 205 | 90 | 0 | 147 | 351 | 86 | 290 | 7.21e-84 | 259 |
| MS.gene40815.t1 | AT1G79630 | 56.098 | 205 | 90 | 0 | 147 | 351 | 86 | 290 | 7.21e-84 | 259 |
| MS.gene40815.t1 | AT1G79630 | 56.098 | 205 | 90 | 0 | 147 | 351 | 86 | 290 | 7.21e-84 | 259 |
| MS.gene40815.t1 | AT4G32950 | 44.027 | 293 | 144 | 4 | 57 | 348 | 41 | 314 | 1.53e-79 | 246 |
| MS.gene40815.t1 | AT5G26010 | 44.781 | 297 | 151 | 4 | 56 | 351 | 41 | 325 | 7.03e-78 | 242 |
| MS.gene40815.t1 | AT3G16800 | 48.673 | 226 | 104 | 3 | 1 | 221 | 1 | 219 | 3.17e-72 | 224 |
| MS.gene40815.t1 | AT4G32950 | 45.868 | 242 | 111 | 4 | 57 | 297 | 41 | 263 | 6.20e-65 | 207 |
| MS.gene40815.t1 | AT2G20050 | 31.090 | 312 | 167 | 7 | 60 | 348 | 109 | 395 | 5.45e-35 | 136 |
| MS.gene40815.t1 | AT2G20050 | 31.090 | 312 | 167 | 7 | 60 | 348 | 109 | 395 | 6.04e-35 | 136 |
| MS.gene40815.t1 | AT3G06270 | 30.952 | 294 | 153 | 9 | 48 | 315 | 40 | 309 | 3.95e-30 | 118 |
| MS.gene40815.t1 | AT2G20630 | 34.328 | 268 | 126 | 12 | 86 | 351 | 60 | 279 | 1.34e-28 | 112 |
| MS.gene40815.t1 | AT4G31750 | 34.615 | 260 | 124 | 13 | 91 | 350 | 66 | 279 | 5.42e-28 | 111 |
| MS.gene40815.t1 | AT4G31750 | 34.615 | 260 | 124 | 13 | 91 | 350 | 66 | 279 | 6.24e-28 | 111 |
| MS.gene40815.t1 | AT4G31750 | 34.615 | 260 | 124 | 13 | 91 | 350 | 66 | 279 | 6.24e-28 | 111 |
| MS.gene40815.t1 | AT2G20630 | 34.457 | 267 | 125 | 12 | 86 | 350 | 60 | 278 | 1.47e-27 | 110 |
| MS.gene40815.t1 | AT4G28400 | 34.351 | 262 | 122 | 13 | 92 | 351 | 48 | 261 | 1.83e-26 | 106 |
| MS.gene40815.t1 | AT4G28400 | 34.351 | 262 | 122 | 13 | 92 | 351 | 70 | 283 | 2.65e-26 | 106 |
| MS.gene40815.t1 | AT5G10740 | 32.700 | 263 | 129 | 10 | 89 | 350 | 64 | 279 | 8.19e-25 | 103 |
| MS.gene40815.t1 | AT5G10740 | 32.700 | 263 | 129 | 10 | 89 | 350 | 64 | 279 | 8.19e-25 | 103 |
| MS.gene40815.t1 | AT5G24940 | 32.308 | 260 | 130 | 10 | 91 | 350 | 66 | 279 | 3.90e-24 | 103 |
| MS.gene40815.t1 | AT5G59220 | 34.188 | 234 | 103 | 8 | 89 | 310 | 148 | 342 | 5.70e-22 | 96.7 |
| MS.gene40815.t1 | AT1G07430 | 32.510 | 243 | 114 | 9 | 89 | 318 | 157 | 362 | 1.17e-21 | 95.9 |
| MS.gene40815.t1 | AT3G11410 | 34.043 | 235 | 119 | 9 | 85 | 309 | 133 | 341 | 1.84e-21 | 94.7 |
| MS.gene40815.t1 | AT1G43900 | 31.439 | 264 | 132 | 11 | 89 | 351 | 154 | 369 | 7.28e-21 | 92.8 |
| MS.gene40815.t1 | AT2G29380 | 33.013 | 312 | 141 | 15 | 23 | 309 | 41 | 309 | 9.80e-20 | 89.7 |
| MS.gene40815.t1 | AT5G53140 | 28.472 | 288 | 160 | 10 | 63 | 350 | 106 | 347 | 1.98e-19 | 89.4 |
| MS.gene40815.t1 | AT5G53140 | 28.472 | 288 | 160 | 10 | 63 | 350 | 106 | 347 | 1.98e-19 | 89.4 |
| MS.gene40815.t1 | AT1G67820 | 31.203 | 266 | 142 | 10 | 45 | 310 | 73 | 297 | 2.78e-19 | 88.6 |
| MS.gene40815.t1 | AT1G78200 | 30.182 | 275 | 144 | 12 | 78 | 350 | 9 | 237 | 2.79e-19 | 86.3 |
| MS.gene40815.t1 | AT1G78200 | 30.182 | 275 | 144 | 12 | 78 | 350 | 9 | 237 | 2.79e-19 | 86.3 |
| MS.gene40815.t1 | AT1G78200 | 30.182 | 275 | 144 | 12 | 78 | 350 | 54 | 282 | 3.11e-19 | 87.0 |
| MS.gene40815.t1 | AT1G78200 | 30.182 | 275 | 144 | 12 | 78 | 350 | 54 | 282 | 3.11e-19 | 87.0 |
| MS.gene40815.t1 | AT1G78200 | 30.182 | 275 | 144 | 12 | 78 | 350 | 54 | 282 | 3.11e-19 | 87.0 |
| MS.gene40815.t1 | AT1G34750 | 38.764 | 178 | 83 | 8 | 173 | 348 | 126 | 279 | 3.55e-19 | 86.7 |
| MS.gene40815.t1 | AT1G34750 | 38.764 | 178 | 83 | 8 | 173 | 348 | 126 | 279 | 3.55e-19 | 86.7 |
| MS.gene40815.t1 | AT1G34750 | 38.764 | 178 | 83 | 8 | 173 | 348 | 126 | 279 | 3.55e-19 | 86.7 |
| MS.gene40815.t1 | AT3G15260 | 37.017 | 181 | 88 | 8 | 173 | 351 | 133 | 289 | 4.75e-19 | 86.7 |
| MS.gene40815.t1 | AT3G15260 | 37.017 | 181 | 88 | 8 | 173 | 351 | 133 | 289 | 4.75e-19 | 86.7 |
| MS.gene40815.t1 | AT1G67820 | 31.203 | 266 | 142 | 10 | 45 | 310 | 109 | 333 | 5.51e-19 | 88.2 |
| MS.gene40815.t1 | AT5G57050 | 32.579 | 221 | 120 | 7 | 89 | 309 | 120 | 311 | 6.75e-19 | 87.4 |
| MS.gene40815.t1 | AT5G57050 | 32.579 | 221 | 120 | 7 | 89 | 309 | 160 | 351 | 8.57e-19 | 87.4 |
| MS.gene40815.t1 | AT3G17250 | 27.839 | 273 | 153 | 8 | 87 | 350 | 156 | 393 | 7.21e-18 | 84.7 |
| MS.gene40815.t1 | AT4G26080 | 32.314 | 229 | 124 | 7 | 81 | 309 | 164 | 361 | 1.18e-17 | 84.0 |
| MS.gene40815.t1 | AT1G07160 | 29.310 | 290 | 165 | 12 | 60 | 348 | 124 | 374 | 2.03e-17 | 83.2 |
| MS.gene40815.t1 | AT2G34740 | 36.667 | 180 | 89 | 9 | 173 | 350 | 178 | 334 | 2.55e-17 | 82.4 |
| MS.gene40815.t1 | AT1G48040 | 29.889 | 271 | 144 | 10 | 89 | 350 | 116 | 349 | 2.70e-17 | 82.8 |
| MS.gene40815.t1 | AT1G22280 | 34.545 | 220 | 117 | 10 | 133 | 350 | 92 | 286 | 3.15e-17 | 81.3 |
| MS.gene40815.t1 | AT5G51760 | 33.473 | 239 | 136 | 7 | 76 | 309 | 101 | 321 | 4.25e-17 | 82.0 |
| MS.gene40815.t1 | AT5G51760 | 33.473 | 239 | 136 | 7 | 76 | 309 | 131 | 351 | 5.18e-17 | 82.0 |
| MS.gene40815.t1 | AT2G25620 | 28.832 | 274 | 134 | 12 | 89 | 348 | 128 | 354 | 5.38e-17 | 82.0 |
| MS.gene40815.t1 | AT2G25620 | 28.832 | 274 | 134 | 12 | 89 | 348 | 128 | 354 | 5.38e-17 | 82.0 |
| MS.gene40815.t1 | AT1G72770 | 30.769 | 234 | 124 | 8 | 89 | 309 | 238 | 446 | 8.55e-17 | 81.6 |
| MS.gene40815.t1 | AT1G72770 | 30.769 | 234 | 124 | 8 | 89 | 309 | 238 | 446 | 8.55e-17 | 81.6 |
| MS.gene40815.t1 | AT1G72770 | 30.769 | 234 | 124 | 8 | 89 | 309 | 238 | 446 | 8.55e-17 | 81.6 |
| MS.gene40815.t1 | AT2G40180 | 29.054 | 296 | 169 | 12 | 56 | 348 | 126 | 383 | 1.25e-16 | 80.9 |
| MS.gene40815.t1 | AT2G30020 | 29.932 | 294 | 157 | 13 | 60 | 348 | 141 | 390 | 1.34e-16 | 80.9 |
| MS.gene40815.t1 | AT1G22280 | 37.222 | 180 | 87 | 9 | 173 | 350 | 125 | 280 | 4.13e-16 | 78.2 |
| MS.gene40815.t1 | AT1G18030 | 28.102 | 274 | 147 | 8 | 91 | 350 | 111 | 348 | 4.60e-16 | 79.0 |
| MS.gene40815.t1 | AT3G62260 | 29.104 | 268 | 149 | 11 | 89 | 350 | 27 | 259 | 6.40e-16 | 77.8 |
| MS.gene40815.t1 | AT3G62260 | 25.956 | 366 | 211 | 15 | 7 | 350 | 21 | 348 | 1.70e-15 | 77.4 |
| MS.gene40815.t1 | AT3G62260 | 28.431 | 306 | 174 | 13 | 55 | 350 | 79 | 349 | 2.18e-15 | 77.0 |
| MS.gene40815.t1 | AT1G17550 | 29.487 | 234 | 126 | 7 | 89 | 308 | 237 | 445 | 2.89e-15 | 77.0 |
| MS.gene40815.t1 | AT1G17550 | 29.487 | 234 | 126 | 7 | 89 | 308 | 237 | 445 | 2.89e-15 | 77.0 |
| MS.gene40815.t1 | AT4G28400 | 33.175 | 211 | 98 | 12 | 92 | 300 | 70 | 239 | 5.65e-15 | 74.3 |
| MS.gene40815.t1 | AT3G55050 | 28.618 | 304 | 150 | 17 | 89 | 352 | 84 | 360 | 7.17e-15 | 75.5 |
| MS.gene40815.t1 | AT3G55050 | 28.618 | 304 | 150 | 17 | 89 | 352 | 84 | 360 | 7.17e-15 | 75.5 |
| MS.gene40815.t1 | AT2G33700 | 28.571 | 273 | 133 | 11 | 89 | 350 | 123 | 344 | 3.56e-14 | 73.6 |
| MS.gene40815.t1 | AT4G38520 | 29.236 | 301 | 148 | 15 | 89 | 350 | 81 | 355 | 5.57e-14 | 72.8 |
| MS.gene40815.t1 | AT4G38520 | 29.236 | 301 | 148 | 15 | 89 | 350 | 81 | 355 | 5.57e-14 | 72.8 |
| MS.gene40815.t1 | AT3G51370 | 29.469 | 207 | 97 | 9 | 183 | 350 | 72 | 268 | 7.13e-14 | 71.6 |
| MS.gene40815.t1 | AT3G51370 | 27.243 | 301 | 154 | 14 | 89 | 350 | 79 | 353 | 9.59e-14 | 72.0 |
| MS.gene40815.t1 | AT3G51370 | 27.243 | 301 | 154 | 14 | 89 | 350 | 79 | 353 | 9.59e-14 | 72.0 |
| MS.gene40815.t1 | AT2G34740 | 37.333 | 150 | 75 | 8 | 173 | 319 | 192 | 325 | 1.45e-13 | 71.2 |
| MS.gene40815.t1 | AT2G40860 | 24.324 | 296 | 174 | 11 | 62 | 350 | 298 | 550 | 1.57e-13 | 72.0 |
| MS.gene40815.t1 | AT2G40860 | 24.080 | 299 | 171 | 12 | 62 | 350 | 396 | 648 | 1.77e-13 | 72.0 |
| MS.gene40815.t1 | AT2G34740 | 37.333 | 150 | 75 | 8 | 173 | 319 | 174 | 307 | 1.81e-13 | 70.5 |
| MS.gene40815.t1 | AT3G51470 | 26.774 | 310 | 155 | 12 | 48 | 333 | 12 | 273 | 8.36e-13 | 68.9 |
| MS.gene40815.t1 | AT3G17090 | 27.000 | 300 | 156 | 12 | 89 | 350 | 84 | 358 | 8.66e-13 | 69.3 |
| MS.gene40815.t1 | AT5G02760 | 27.309 | 249 | 131 | 10 | 89 | 313 | 72 | 294 | 9.61e-13 | 68.9 |
| MS.gene40815.t1 | AT1G18030 | 28.767 | 219 | 116 | 6 | 92 | 300 | 112 | 300 | 1.32e-12 | 68.2 |
| MS.gene40815.t1 | AT2G40860 | 23.897 | 272 | 158 | 10 | 62 | 323 | 396 | 628 | 1.34e-12 | 69.3 |
| MS.gene40815.t1 | AT3G51470 | 25.994 | 327 | 163 | 13 | 48 | 350 | 56 | 327 | 1.35e-12 | 68.6 |
| MS.gene40815.t1 | AT5G06750 | 27.090 | 299 | 153 | 14 | 88 | 351 | 81 | 349 | 1.91e-12 | 68.2 |
| MS.gene40815.t1 | AT5G06750 | 27.090 | 299 | 153 | 14 | 88 | 351 | 81 | 349 | 1.91e-12 | 68.2 |
| MS.gene40815.t1 | AT3G12620 | 26.198 | 313 | 158 | 14 | 81 | 350 | 75 | 357 | 7.37e-12 | 66.2 |
| MS.gene40815.t1 | AT3G12620 | 26.198 | 313 | 158 | 14 | 81 | 350 | 75 | 357 | 7.37e-12 | 66.2 |
| MS.gene40815.t1 | AT1G47380 | 33.099 | 142 | 80 | 6 | 172 | 308 | 127 | 258 | 1.80e-11 | 65.5 |
| MS.gene40815.t1 | AT5G66080 | 29.245 | 212 | 102 | 10 | 177 | 350 | 51 | 252 | 1.98e-11 | 64.3 |
| MS.gene40815.t1 | AT5G66080 | 29.245 | 212 | 102 | 10 | 177 | 350 | 155 | 356 | 2.64e-11 | 64.7 |
| MS.gene40815.t1 | AT1G09160 | 28.829 | 222 | 121 | 11 | 91 | 306 | 70 | 260 | 5.27e-11 | 63.9 |
| MS.gene40815.t1 | AT1G09160 | 28.829 | 222 | 121 | 11 | 91 | 306 | 70 | 260 | 5.27e-11 | 63.9 |
| MS.gene40815.t1 | AT5G06750 | 30.583 | 206 | 101 | 9 | 177 | 351 | 73 | 267 | 9.71e-11 | 62.4 |
Find 68 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCCTTTCTTGCCTCTTT+TGG | 0.160489 | 1.2:+59742617 | None:intergenic |
| TCTGTCTTTAAATCGATTTC+TGG | 0.179343 | 1.2:+59741856 | None:intergenic |
| AACATCAGATGATGGAAATT+TGG | 0.207580 | 1.2:-59741419 | MS.gene40815:CDS |
| TGATGCTGATTATAGGAATT+TGG | 0.226218 | 1.2:-59742021 | MS.gene40815:intron |
| ACAAGACTAACGAGGTAAAT+TGG | 0.249615 | 1.2:+59741366 | None:intergenic |
| CTAGCCATGTCAAGGGCTTT+TGG | 0.292270 | 1.2:-59741149 | MS.gene40815:CDS |
| AAATCTATTGTTAGCTGAAT+CGG | 0.351947 | 1.2:+59741394 | None:intergenic |
| TCTGGCACTGTTAATGTTGA+TGG | 0.353049 | 1.2:-59742666 | MS.gene40815:CDS |
| GACTATTGTATGAAAGATTA+TGG | 0.353263 | 1.2:-59741125 | MS.gene40815:CDS |
| TTCATCCATGTTCAATGGAT+TGG | 0.389835 | 1.2:-59742793 | MS.gene40815:CDS |
| TTCTCCAAAAGAGGCAAGAA+AGG | 0.392141 | 1.2:-59742621 | MS.gene40815:CDS |
| AACAAGTTCATCTAAACGTT+TGG | 0.410687 | 1.2:-59740822 | MS.gene40815:CDS |
| CAAGACTAACGAGGTAAATT+GGG | 0.412134 | 1.2:+59741367 | None:intergenic |
| GTTGCCAGACGAGGAGTCTC+CGG | 0.413127 | 1.2:-59741174 | MS.gene40815:CDS |
| AAAGGAAGCACTAAATATAG+TGG | 0.436790 | 1.2:-59742750 | MS.gene40815:CDS |
| ATATTCCTTTGTGTTACCTC+AGG | 0.437953 | 1.2:+59741089 | None:intergenic |
| CCCACACTAAGCAACAATCT+TGG | 0.441948 | 1.2:+59742592 | None:intergenic |
| CAGTTGCATAGCAAAGTTGA+TGG | 0.450373 | 1.2:+59741910 | None:intergenic |
| CATCAACTTTGCTATGCAAC+TGG | 0.452384 | 1.2:-59741909 | MS.gene40815:CDS |
| CTAGGCAAAACACTCGGCCT+TGG | 0.464614 | 1.2:+59741225 | None:intergenic |
| CACTCCCTTATCAATAGCTC+TGG | 0.468896 | 1.2:-59742684 | MS.gene40815:CDS |
| AACCACACGCGGTGCACTCC+AGG | 0.470257 | 1.2:+59741194 | None:intergenic |
| CACTGGCTAGCACAACAAAC+TGG | 0.472903 | 1.2:+59741054 | None:intergenic |
| CAGTGCCAGAGCTATTGATA+AGG | 0.477915 | 1.2:+59742679 | None:intergenic |
| GCACTCCAGGCTCGTCGTCT+AGG | 0.478686 | 1.2:+59741207 | None:intergenic |
| ACCAAGATTGTTGCTTAGTG+TGG | 0.483688 | 1.2:-59742593 | MS.gene40815:CDS |
| CACAGAAGATCATGTCCTCT+TGG | 0.484401 | 1.2:+59741995 | None:intergenic |
| AACAAGATCGGTTTAATATG+TGG | 0.489713 | 1.2:-59741828 | MS.gene40815:CDS |
| GGCAGTGTCAATTGTTAGAC+AGG | 0.490348 | 1.2:-59741719 | MS.gene40815:intron |
| TTTGTTGTGCTAGCCAGTGA+TGG | 0.493636 | 1.2:-59741050 | MS.gene40815:CDS |
| TTGTTGTGCTAGCCAGTGAT+GGG | 0.495608 | 1.2:-59741049 | MS.gene40815:CDS |
| AGTCCCGGAGACTCCTCGTC+TGG | 0.496206 | 1.2:+59741170 | None:intergenic |
| TTGCCAGACGAGGAGTCTCC+GGG | 0.501338 | 1.2:-59741173 | MS.gene40815:CDS |
| AACTTTGCTATGCAACTGGC+AGG | 0.504869 | 1.2:-59741905 | MS.gene40815:CDS |
| CTCATTGTGATTGCAAATGT+TGG | 0.523646 | 1.2:-59741466 | MS.gene40815:CDS |
| GAGAGAAGCTGCTGAAGCAT+TGG | 0.524056 | 1.2:-59742727 | MS.gene40815:CDS |
| GCCCTTGACATGGCTAGTCC+CGG | 0.525214 | 1.2:+59741155 | None:intergenic |
| AAGTTCATCTAAACGTTTGG+TGG | 0.532257 | 1.2:-59740819 | MS.gene40815:CDS |
| CCGCGTGTGGTTGCCAGACG+AGG | 0.539063 | 1.2:-59741183 | MS.gene40815:CDS |
| GGCATGAAAGAACAGACATA+TGG | 0.540817 | 1.2:+59740736 | None:intergenic |
| TTAGCTACAACATCAGATGA+TGG | 0.541249 | 1.2:-59741427 | MS.gene40815:CDS |
| CCAAGATTGTTGCTTAGTGT+GGG | 0.541694 | 1.2:-59742592 | MS.gene40815:CDS |
| AGTGCCAGAGCTATTGATAA+GGG | 0.543600 | 1.2:+59742680 | None:intergenic |
| TTTGATGGACATGGACCTTG+GGG | 0.548074 | 1.2:-59741967 | MS.gene40815:CDS |
| CCTCGTCTGGCAACCACACG+CGG | 0.551813 | 1.2:+59741183 | None:intergenic |
| CTTTGCCAATCCATTGAACA+TGG | 0.552225 | 1.2:+59742788 | None:intergenic |
| CAAGAGGACATGATCTTCTG+TGG | 0.563305 | 1.2:-59741994 | MS.gene40815:CDS |
| CTCCGGGACTAGCCATGTCA+AGG | 0.564535 | 1.2:-59741157 | MS.gene40815:CDS |
| AAGTCATTGAAAATGAAGAA+AGG | 0.566697 | 1.2:-59742768 | MS.gene40815:CDS |
| CAAGAGGAGAGGTATTGCTA+TGG | 0.573144 | 1.2:-59740771 | MS.gene40815:CDS |
| AAGAGGACATGATCTTCTGT+GGG | 0.573683 | 1.2:-59741993 | MS.gene40815:CDS |
| TGGTCTTATTTCAGTGCCTG+AGG | 0.582234 | 1.2:-59741105 | MS.gene40815:CDS |
| AAGGAAGCACTAAATATAGT+GGG | 0.587134 | 1.2:-59742749 | MS.gene40815:CDS |
| TGGAGTGTGCAATGCATGCA+TGG | 0.603821 | 1.2:-59740799 | MS.gene40815:CDS |
| AGCCTGGAGTGCACCGCGTG+TGG | 0.608073 | 1.2:-59741196 | MS.gene40815:CDS |
| ACAACACTATACCCCATCAC+TGG | 0.610864 | 1.2:+59741037 | None:intergenic |
| GATCTCTAATCAAGAAGCAG+TGG | 0.623241 | 1.2:-59740870 | MS.gene40815:CDS |
| GAGAGAATACTTGACTGCCA+AGG | 0.626902 | 1.2:-59741242 | MS.gene40815:CDS |
| GTCACCAAAAGCCCTTGACA+TGG | 0.627988 | 1.2:+59741145 | None:intergenic |
| CTTGACACATAGTGACCCCA+AGG | 0.653326 | 1.2:+59741952 | None:intergenic |
| TGCATGCATGGAAATGCAAG+AGG | 0.655697 | 1.2:-59740787 | MS.gene40815:CDS |
| TGTTGTGCTAGCCAGTGATG+GGG | 0.661746 | 1.2:-59741048 | MS.gene40815:intron |
| GCATGGAAATGCAAGAGGAG+AGG | 0.668340 | 1.2:-59740782 | MS.gene40815:CDS |
| TCCGGGACTAGCCATGTCAA+GGG | 0.669962 | 1.2:-59741156 | MS.gene40815:CDS |
| ATAGGAATTTGGATGCCAAG+AGG | 0.678718 | 1.2:-59742010 | MS.gene40815:intron |
| CGTCGTCTAGGCAAAACACT+CGG | 0.694898 | 1.2:+59741219 | None:intergenic |
| AGAGGACATGATCTTCTGTG+GGG | 0.705200 | 1.2:-59741992 | MS.gene40815:CDS |
| CAGTGCCTGAGGTAACACAA+AGG | 0.740903 | 1.2:-59741094 | MS.gene40815:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTCAAAAATATTAATCTT+TGG | - | chr1.2:59741938-59741957 | MS.gene40815:CDS | 15.0% |
| !!! | TGTTAATTATTATCTTTTCA+AGG | - | chr1.2:59740988-59741007 | MS.gene40815:intron | 15.0% |
| !! | AACTTATGAATATCATAAGT+TGG | + | chr1.2:59741259-59741278 | None:intergenic | 20.0% |
| !! | AAGCAAAACAAATAGAAAAA+AGG | + | chr1.2:59741995-59742014 | None:intergenic | 20.0% |
| !! | AATAAGAGAATATTCTCTAA+TGG | + | chr1.2:59741472-59741491 | None:intergenic | 20.0% |
| !!! | CCTTTGAAATAGTAAAAATA+GGG | - | chr1.2:59742523-59742542 | MS.gene40815:intron | 20.0% |
| !!! | TCCTTTGAAATAGTAAAAAT+AGG | - | chr1.2:59742522-59742541 | MS.gene40815:intron | 20.0% |
| ! | AAATCTATTGTTAGCTGAAT+CGG | + | chr1.2:59742146-59742165 | None:intergenic | 25.0% |
| ! | AAGTCATTGAAAATGAAGAA+AGG | - | chr1.2:59740769-59740788 | MS.gene40815:CDS | 25.0% |
| ! | ATAACATCTATTAACCTGTT+TGG | - | chr1.2:59741168-59741187 | MS.gene40815:CDS | 25.0% |
| ! | CATAAGTGGTTATGTATAAA+TGG | + | chr1.2:59741436-59741455 | None:intergenic | 25.0% |
| ! | GACTATTGTATGAAAGATTA+TGG | - | chr1.2:59742412-59742431 | MS.gene40815:intron | 25.0% |
| ! | TACATGTGTTATATAGGTTT+GGG | - | chr1.2:59742640-59742659 | MS.gene40815:CDS | 25.0% |
| ! | TTAAATAAGTCAATCCAAAC+AGG | + | chr1.2:59741185-59741204 | None:intergenic | 25.0% |
| ! | TTACATGTGTTATATAGGTT+TGG | - | chr1.2:59742639-59742658 | MS.gene40815:CDS | 25.0% |
| ! | TTAGACAGGTAAAACATAAA+AGG | - | chr1.2:59741832-59741851 | MS.gene40815:CDS | 25.0% |
| !! | GGTTTTTACATGTGTTATAT+AGG | - | chr1.2:59742634-59742653 | MS.gene40815:CDS | 25.0% |
| !! | TACAGAATCATGATAAGTTT+TGG | + | chr1.2:59742037-59742056 | None:intergenic | 25.0% |
| !! | TCTGTTTTCATAAACTATCT+TGG | + | chr1.2:59741149-59741168 | None:intergenic | 25.0% |
| !!! | AATTTGTTGATGCTGATTAT+AGG | - | chr1.2:59741509-59741528 | MS.gene40815:intron | 25.0% |
| !!! | CCCTATTTTTACTATTTCAA+AGG | + | chr1.2:59742526-59742545 | None:intergenic | 25.0% |
| !!! | GCTGAATTTTGATATGTAAT+TGG | - | chr1.2:59742613-59742632 | MS.gene40815:CDS | 25.0% |
| !!! | GTTTTTTCATTGTACATAAG+TGG | + | chr1.2:59741450-59741469 | None:intergenic | 25.0% |
| AACAAGTTCATCTAAACGTT+TGG | - | chr1.2:59742715-59742734 | MS.gene40815:CDS | 30.0% | |
| AGACAGAGAAAAAACAAGAT+CGG | - | chr1.2:59741697-59741716 | MS.gene40815:intron | 30.0% | |
| ATCATGATTCTGTAATGAAC+AGG | - | chr1.2:59742043-59742062 | MS.gene40815:intron | 30.0% | |
| CGCTTAATTAATATCCAAAC+AGG | - | chr1.2:59741409-59741428 | MS.gene40815:CDS | 30.0% | |
| GTTGTGTTCATAAGATATCT+TGG | + | chr1.2:59741308-59741327 | None:intergenic | 30.0% | |
| TATGTATAAATGGACCTGTT+TGG | + | chr1.2:59741426-59741445 | None:intergenic | 30.0% | |
| TCATGATTCTGTAATGAACA+GGG | - | chr1.2:59742044-59742063 | MS.gene40815:intron | 30.0% | |
| TTGGAAAGCTTACGAAAATA+AGG | + | chr1.2:59741130-59741149 | None:intergenic | 30.0% | |
| ! | AACAAGATCGGTTTAATATG+TGG | - | chr1.2:59741709-59741728 | MS.gene40815:intron | 30.0% |
| ! | CATTTTTCATCCATGTTCAA+TGG | - | chr1.2:59740739-59740758 | MS.gene40815:CDS | 30.0% |
| ! | TCTGTCTTTAAATCGATTTC+TGG | + | chr1.2:59741684-59741703 | None:intergenic | 30.0% |
| ! | TGATGCTGATTATAGGAATT+TGG | - | chr1.2:59741516-59741535 | MS.gene40815:intron | 30.0% |
| !! | AAAGGAAGCACTAAATATAG+TGG | - | chr1.2:59740787-59740806 | MS.gene40815:CDS | 30.0% |
| !! | AACATCAGATGATGGAAATT+TGG | - | chr1.2:59742118-59742137 | MS.gene40815:intron | 30.0% |
| !! | AAGGAAGCACTAAATATAGT+GGG | - | chr1.2:59740788-59740807 | MS.gene40815:CDS | 30.0% |
| !! | TTATCTTTTCAAGGTCTGTT+TGG | - | chr1.2:59740997-59741016 | MS.gene40815:intron | 30.0% |
| !!! | AAGATTGATTCGTTTTTCAG+TGG | - | chr1.2:59741789-59741808 | MS.gene40815:CDS | 30.0% |
| AAGCACTTGCAAGATTGTTT+AGG | - | chr1.2:59741219-59741238 | MS.gene40815:CDS | 35.0% | |
| AAGTTCATCTAAACGTTTGG+TGG | - | chr1.2:59742718-59742737 | MS.gene40815:CDS | 35.0% | |
| AATAGTGAACAAGACTAACG+AGG | + | chr1.2:59742182-59742201 | None:intergenic | 35.0% | |
| ACAAGACTAACGAGGTAAAT+TGG | + | chr1.2:59742174-59742193 | None:intergenic | 35.0% | |
| AGACTATTTGGGAGAGTTTA+TGG | - | chr1.2:59741068-59741087 | MS.gene40815:CDS | 35.0% | |
| ATATTCCTTTGTGTTACCTC+AGG | + | chr1.2:59742451-59742470 | None:intergenic | 35.0% | |
| CAAGACTAACGAGGTAAATT+GGG | + | chr1.2:59742173-59742192 | None:intergenic | 35.0% | |
| CTCATTGTGATTGCAAATGT+TGG | - | chr1.2:59742071-59742090 | MS.gene40815:intron | 35.0% | |
| TCTTGATGCAATGTTTGTAG+AGG | - | chr1.2:59742267-59742286 | MS.gene40815:intron | 35.0% | |
| TGTTGCATTAGAGTTACACA+TGG | + | chr1.2:59742222-59742241 | None:intergenic | 35.0% | |
| TTAGCTACAACATCAGATGA+TGG | - | chr1.2:59742110-59742129 | MS.gene40815:intron | 35.0% | |
| TTCATCCATGTTCAATGGAT+TGG | - | chr1.2:59740744-59740763 | MS.gene40815:CDS | 35.0% | |
| ! | TCTCCCAAATAGTCTTAGAA+GGG | + | chr1.2:59741063-59741082 | None:intergenic | 35.0% |
| !! | AAGCCCTTCTAAGACTATTT+GGG | - | chr1.2:59741057-59741076 | MS.gene40815:CDS | 35.0% |
| !! | TAAGCCCTTCTAAGACTATT+TGG | - | chr1.2:59741056-59741075 | MS.gene40815:CDS | 35.0% |
| AAGAGGACATGATCTTCTGT+GGG | - | chr1.2:59741544-59741563 | MS.gene40815:intron | 40.0% | |
| AGTGCCAGAGCTATTGATAA+GGG | + | chr1.2:59740860-59740879 | None:intergenic | 40.0% | |
| ATAGGAATTTGGATGCCAAG+AGG | - | chr1.2:59741527-59741546 | MS.gene40815:intron | 40.0% | |
| CAGTTGCATAGCAAAGTTGA+TGG | + | chr1.2:59741630-59741649 | None:intergenic | 40.0% | |
| CTTTGCCAATCCATTGAACA+TGG | + | chr1.2:59740752-59740771 | None:intergenic | 40.0% | |
| GATCTCTAATCAAGAAGCAG+TGG | - | chr1.2:59742667-59742686 | MS.gene40815:CDS | 40.0% | |
| GGCATGAAAGAACAGACATA+TGG | + | chr1.2:59742804-59742823 | None:intergenic | 40.0% | |
| TCTGGCACTGTTAATGTTGA+TGG | - | chr1.2:59740871-59740890 | MS.gene40815:CDS | 40.0% | |
| TCTTGCAAGTGCTTATGACT+AGG | + | chr1.2:59741213-59741232 | None:intergenic | 40.0% | |
| TTCAAGGTCTGTTTGGACTT+TGG | - | chr1.2:59741004-59741023 | MS.gene40815:intron | 40.0% | |
| TTCTCCAAAAGAGGCAAGAA+AGG | - | chr1.2:59740916-59740935 | MS.gene40815:intron | 40.0% | |
| ! | AACTCCTTTCTTGCCTCTTT+TGG | + | chr1.2:59740923-59740942 | None:intergenic | 40.0% |
| ! | ACCAAGATTGTTGCTTAGTG+TGG | - | chr1.2:59740944-59740963 | MS.gene40815:intron | 40.0% |
| ! | ATCTTCTGTGGGGTTTTTGA+TGG | - | chr1.2:59741555-59741574 | MS.gene40815:intron | 40.0% |
| ! | CATCAACTTTGCTATGCAAC+TGG | - | chr1.2:59741628-59741647 | MS.gene40815:intron | 40.0% |
| ! | CCAAGATTGTTGCTTAGTGT+GGG | - | chr1.2:59740945-59740964 | MS.gene40815:intron | 40.0% |
| ! | CTCTCCCAAATAGTCTTAGA+AGG | + | chr1.2:59741064-59741083 | None:intergenic | 40.0% |
| !! | TTCGTTTTTCAGTGGAACGA+CGG | - | chr1.2:59741797-59741816 | MS.gene40815:CDS | 40.0% |
| !! | TTTTGATGGACATGGACCTT+GGG | - | chr1.2:59741569-59741588 | MS.gene40815:intron | 40.0% |
| !! | TTTTTGATGGACATGGACCT+TGG | - | chr1.2:59741568-59741587 | MS.gene40815:intron | 40.0% |
| ACAACACTATACCCCATCAC+TGG | + | chr1.2:59742503-59742522 | None:intergenic | 45.0% | |
| AGAGGACATGATCTTCTGTG+GGG | - | chr1.2:59741545-59741564 | MS.gene40815:intron | 45.0% | |
| CAAGAGGACATGATCTTCTG+TGG | - | chr1.2:59741543-59741562 | MS.gene40815:intron | 45.0% | |
| CACAGAAGATCATGTCCTCT+TGG | + | chr1.2:59741545-59741564 | None:intergenic | 45.0% | |
| CACTCCCTTATCAATAGCTC+TGG | - | chr1.2:59740853-59740872 | MS.gene40815:CDS | 45.0% | |
| CAGTGCCAGAGCTATTGATA+AGG | + | chr1.2:59740861-59740880 | None:intergenic | 45.0% | |
| CCCACACTAAGCAACAATCT+TGG | + | chr1.2:59740948-59740967 | None:intergenic | 45.0% | |
| GAGAGAATACTTGACTGCCA+AGG | - | chr1.2:59742295-59742314 | MS.gene40815:intron | 45.0% | |
| GGCAGTGTCAATTGTTAGAC+AGG | - | chr1.2:59741818-59741837 | MS.gene40815:CDS | 45.0% | |
| TGCATGCATGGAAATGCAAG+AGG | - | chr1.2:59742750-59742769 | MS.gene40815:CDS | 45.0% | |
| TTGTTGTGCTAGCCAGTGAT+GGG | - | chr1.2:59742488-59742507 | MS.gene40815:intron | 45.0% | |
| ! | AACTTTGCTATGCAACTGGC+AGG | - | chr1.2:59741632-59741651 | MS.gene40815:intron | 45.0% |
| ! | GCCTCAGTTTTCTCCAAAAG+AGG | - | chr1.2:59740907-59740926 | MS.gene40815:intron | 45.0% |
| ! | TTTGATGGACATGGACCTTG+GGG | - | chr1.2:59741570-59741589 | MS.gene40815:intron | 45.0% |
| ! | TTTGTTGTGCTAGCCAGTGA+TGG | - | chr1.2:59742487-59742506 | MS.gene40815:intron | 45.0% |
| !! | CAAGAGGAGAGGTATTGCTA+TGG | - | chr1.2:59742766-59742785 | MS.gene40815:CDS | 45.0% |
| !! | GCCTCTTTTGGAGAAAACTG+AGG | + | chr1.2:59740911-59740930 | None:intergenic | 45.0% |
| !! | TGGTCTTATTTCAGTGCCTG+AGG | - | chr1.2:59742432-59742451 | MS.gene40815:intron | 45.0% |
| !! | TGTGGGGTTTTTGATGGACA+TGG | - | chr1.2:59741561-59741580 | MS.gene40815:intron | 45.0% |
| CAGTGCCTGAGGTAACACAA+AGG | - | chr1.2:59742443-59742462 | MS.gene40815:intron | 50.0% | |
| CGTCGTCTAGGCAAAACACT+CGG | + | chr1.2:59742321-59742340 | None:intergenic | 50.0% | |
| CTTGACACATAGTGACCCCA+AGG | + | chr1.2:59741588-59741607 | None:intergenic | 50.0% | |
| GAGAGAAGCTGCTGAAGCAT+TGG | - | chr1.2:59740810-59740829 | MS.gene40815:CDS | 50.0% | |
| GCATGGAAATGCAAGAGGAG+AGG | - | chr1.2:59742755-59742774 | MS.gene40815:CDS | 50.0% | |
| GTCACCAAAAGCCCTTGACA+TGG | + | chr1.2:59742395-59742414 | None:intergenic | 50.0% | |
| TGGAGTGTGCAATGCATGCA+TGG | - | chr1.2:59742738-59742757 | MS.gene40815:CDS | 50.0% | |
| TGTTGTGCTAGCCAGTGATG+GGG | - | chr1.2:59742489-59742508 | MS.gene40815:intron | 50.0% | |
| ! | CACTGGCTAGCACAACAAAC+TGG | + | chr1.2:59742486-59742505 | None:intergenic | 50.0% |
| ! | CTAGCCATGTCAAGGGCTTT+TGG | - | chr1.2:59742388-59742407 | MS.gene40815:intron | 50.0% |
| CTAGGCAAAACACTCGGCCT+TGG | + | chr1.2:59742315-59742334 | None:intergenic | 55.0% | |
| ! | TTTTGCCTAGACGACGAGCC+TGG | - | chr1.2:59742325-59742344 | MS.gene40815:intron | 55.0% |
| !! | TCCGGGACTAGCCATGTCAA+GGG | - | chr1.2:59742381-59742400 | MS.gene40815:intron | 55.0% |
| GTTGCCAGACGAGGAGTCTC+CGG | - | chr1.2:59742363-59742382 | MS.gene40815:intron | 60.0% | |
| TTGCCAGACGAGGAGTCTCC+GGG | - | chr1.2:59742364-59742383 | MS.gene40815:intron | 60.0% | |
| ! | GCCCTTGACATGGCTAGTCC+CGG | + | chr1.2:59742385-59742404 | None:intergenic | 60.0% |
| !! | CTCCGGGACTAGCCATGTCA+AGG | - | chr1.2:59742380-59742399 | MS.gene40815:intron | 60.0% |
| AACCACACGCGGTGCACTCC+AGG | + | chr1.2:59742346-59742365 | None:intergenic | 65.0% | |
| AGTCCCGGAGACTCCTCGTC+TGG | + | chr1.2:59742370-59742389 | None:intergenic | 65.0% | |
| CCTCGTCTGGCAACCACACG+CGG | + | chr1.2:59742357-59742376 | None:intergenic | 65.0% | |
| GCACTCCAGGCTCGTCGTCT+AGG | + | chr1.2:59742333-59742352 | None:intergenic | 65.0% | |
| AGCCTGGAGTGCACCGCGTG+TGG | - | chr1.2:59742341-59742360 | MS.gene40815:intron | 70.0% | |
| CCGCGTGTGGTTGCCAGACG+AGG | - | chr1.2:59742354-59742373 | MS.gene40815:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 59740733 | 59742826 | 59740733 | ID=MS.gene40815 |
| chr1.2 | mRNA | 59740733 | 59742826 | 59740733 | ID=MS.gene40815.t1;Parent=MS.gene40815 |
| chr1.2 | exon | 59742590 | 59742826 | 59742590 | ID=MS.gene40815.t1.exon1;Parent=MS.gene40815.t1 |
| chr1.2 | CDS | 59742590 | 59742826 | 59742590 | ID=cds.MS.gene40815.t1;Parent=MS.gene40815.t1 |
| chr1.2 | exon | 59741720 | 59742028 | 59741720 | ID=MS.gene40815.t1.exon2;Parent=MS.gene40815.t1 |
| chr1.2 | CDS | 59741720 | 59742028 | 59741720 | ID=cds.MS.gene40815.t1;Parent=MS.gene40815.t1 |
| chr1.2 | exon | 59741377 | 59741494 | 59741377 | ID=MS.gene40815.t1.exon3;Parent=MS.gene40815.t1 |
| chr1.2 | CDS | 59741377 | 59741494 | 59741377 | ID=cds.MS.gene40815.t1;Parent=MS.gene40815.t1 |
| chr1.2 | exon | 59741049 | 59741272 | 59741049 | ID=MS.gene40815.t1.exon4;Parent=MS.gene40815.t1 |
| chr1.2 | CDS | 59741049 | 59741272 | 59741049 | ID=cds.MS.gene40815.t1;Parent=MS.gene40815.t1 |
| chr1.2 | exon | 59740733 | 59740903 | 59740733 | ID=MS.gene40815.t1.exon5;Parent=MS.gene40815.t1 |
| chr1.2 | CDS | 59740733 | 59740903 | 59740733 | ID=cds.MS.gene40815.t1;Parent=MS.gene40815.t1 |
| Gene Sequence |
| Protein sequence |
