Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42651.t1 | XP_024635939.1 | 97.7 | 390 | 9 | 0 | 6 | 395 | 237 | 626 | 1.00E-222 | 782.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42651.t1 | Q38961 | 41.3 | 300 | 160 | 8 | 87 | 379 | 124 | 414 | 4.8e-59 | 229.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42651.t1 | A0A396IZH0 | 97.7 | 390 | 9 | 0 | 6 | 395 | 237 | 626 | 7.5e-223 | 782.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05124 | MS.gene42651 | 0.822146 | 2.77E-53 | -1.69E-46 |
| MS.gene051914 | MS.gene42651 | 0.818107 | 2.33E-52 | -1.69E-46 |
| MS.gene052308 | MS.gene42651 | 0.829303 | 5.55E-55 | -1.69E-46 |
| MS.gene052367 | MS.gene42651 | 0.82097 | 5.18E-53 | -1.69E-46 |
| MS.gene053173 | MS.gene42651 | 0.835092 | 2.05E-56 | -1.69E-46 |
| MS.gene053348 | MS.gene42651 | 0.809792 | 1.59E-50 | -1.69E-46 |
| MS.gene053416 | MS.gene42651 | 0.820154 | 7.97E-53 | -1.69E-46 |
| MS.gene053417 | MS.gene42651 | 0.818611 | 1.79E-52 | -1.69E-46 |
| MS.gene054459 | MS.gene42651 | 0.821565 | 3.77E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene42651 | 0.835049 | 2.10E-56 | -1.69E-46 |
| MS.gene054593 | MS.gene42651 | 0.8193 | 1.25E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene42651 | 0.824544 | 7.62E-54 | -1.69E-46 |
| MS.gene054662 | MS.gene42651 | 0.826451 | 2.69E-54 | -1.69E-46 |
| MS.gene054885 | MS.gene42651 | 0.803548 | 3.31E-49 | -1.69E-46 |
| MS.gene055308 | MS.gene42651 | 0.83286 | 7.43E-56 | -1.69E-46 |
| MS.gene055578 | MS.gene42651 | 0.805439 | 1.33E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene42651 | 0.803668 | 3.12E-49 | -1.69E-46 |
| MS.gene056041 | MS.gene42651 | 0.837316 | 5.59E-57 | -1.69E-46 |
| MS.gene05640 | MS.gene42651 | 0.888814 | 4.23E-73 | -1.69E-46 |
| MS.gene057458 | MS.gene42651 | 0.831873 | 1.30E-55 | -1.69E-46 |
| MS.gene058128 | MS.gene42651 | 0.813455 | 2.54E-51 | -1.69E-46 |
| MS.gene058853 | MS.gene42651 | 0.825584 | 4.33E-54 | -1.69E-46 |
| MS.gene059553 | MS.gene42651 | 0.831322 | 1.78E-55 | -1.69E-46 |
| MS.gene060473 | MS.gene42651 | 0.815779 | 7.76E-52 | -1.69E-46 |
| MS.gene060565 | MS.gene42651 | 0.812586 | 3.94E-51 | -1.69E-46 |
| MS.gene06093 | MS.gene42651 | 0.877355 | 6.72E-69 | -1.69E-46 |
| MS.gene061099 | MS.gene42651 | 0.818203 | 2.22E-52 | -1.69E-46 |
| MS.gene061260 | MS.gene42651 | 0.830449 | 2.92E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42651.t1 | MTR_3g105470 | 96.923 | 390 | 9 | 1 | 6 | 395 | 237 | 623 | 0.0 | 794 |
| MS.gene42651.t1 | MTR_7g084670 | 40.433 | 277 | 155 | 5 | 108 | 379 | 170 | 441 | 1.62e-65 | 217 |
| MS.gene42651.t1 | MTR_7g084670 | 41.219 | 279 | 150 | 7 | 108 | 379 | 170 | 441 | 2.86e-65 | 217 |
| MS.gene42651.t1 | MTR_7g082860 | 37.276 | 279 | 159 | 6 | 110 | 377 | 43 | 316 | 6.22e-52 | 187 |
| MS.gene42651.t1 | MTR_7g082860 | 37.276 | 279 | 159 | 6 | 110 | 377 | 43 | 316 | 7.29e-52 | 187 |
| MS.gene42651.t1 | MTR_7g082860 | 37.276 | 279 | 159 | 6 | 110 | 377 | 43 | 316 | 8.92e-52 | 186 |
| MS.gene42651.t1 | MTR_7g082860 | 37.276 | 279 | 159 | 6 | 110 | 377 | 43 | 316 | 9.70e-52 | 186 |
| MS.gene42651.t1 | MTR_7g082860 | 37.276 | 279 | 159 | 6 | 110 | 377 | 43 | 316 | 1.10e-51 | 186 |
| MS.gene42651.t1 | MTR_0280s0030 | 32.906 | 234 | 128 | 8 | 136 | 348 | 18 | 243 | 6.68e-28 | 115 |
| MS.gene42651.t1 | MTR_1g052840 | 33.333 | 210 | 107 | 6 | 136 | 320 | 18 | 219 | 1.60e-26 | 110 |
| MS.gene42651.t1 | MTR_1g020070 | 93.478 | 46 | 3 | 0 | 170 | 215 | 1 | 46 | 3.32e-24 | 100 |
| MS.gene42651.t1 | MTR_8g465220 | 88.372 | 43 | 5 | 0 | 218 | 260 | 37 | 79 | 3.79e-21 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42651.t1 | AT2G45700 | 70.141 | 355 | 102 | 3 | 42 | 395 | 324 | 675 | 1.47e-178 | 514 |
| MS.gene42651.t1 | AT2G45700 | 69.323 | 251 | 73 | 3 | 42 | 291 | 324 | 571 | 1.47e-115 | 350 |
| MS.gene42651.t1 | AT3G26680 | 40.323 | 310 | 169 | 8 | 77 | 379 | 114 | 414 | 3.62e-65 | 216 |
| MS.gene42651.t1 | AT3G26680 | 40.323 | 310 | 169 | 8 | 77 | 379 | 114 | 414 | 3.62e-65 | 216 |
| MS.gene42651.t1 | AT3G26680 | 40.323 | 310 | 169 | 8 | 77 | 379 | 114 | 414 | 3.62e-65 | 216 |
| MS.gene42651.t1 | AT3G26680 | 40.328 | 305 | 166 | 8 | 77 | 374 | 114 | 409 | 1.38e-62 | 207 |
| MS.gene42651.t1 | AT1G66730 | 37.847 | 288 | 160 | 7 | 110 | 383 | 54 | 336 | 5.24e-54 | 193 |
| MS.gene42651.t1 | AT1G27410 | 31.356 | 236 | 137 | 7 | 130 | 348 | 12 | 239 | 1.54e-29 | 119 |
Find 92 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGTTGCAATTTGCCTTTC+TGG | 0.032332 | 3.4:-92207039 | None:intergenic |
| TTCTGGTTTCTAATCCTTCT+AGG | 0.191762 | 3.4:-92207022 | None:intergenic |
| CCTTGTATGGCACACCATTT+AGG | 0.239725 | 3.4:-92207262 | None:intergenic |
| TCTCCTACTGGTTGGACATT+TGG | 0.266596 | 3.4:+92210711 | MS.gene42651:CDS |
| TGTATTACAGCCTCTTGTTT+TGG | 0.274957 | 3.4:-92209818 | None:intergenic |
| ACCCTGCTGCCACCTTCTTC+CGG | 0.280118 | 3.4:-92210754 | None:intergenic |
| TACCAGCTATTTCAACCTTT+TGG | 0.280971 | 3.4:-92208554 | None:intergenic |
| AGGAAAAGAAAGACTATTCT+TGG | 0.321061 | 3.4:+92210124 | MS.gene42651:intron |
| CCCTGCTGCCACCTTCTTCC+GGG | 0.322980 | 3.4:-92210753 | None:intergenic |
| AGGTTCAAAGAGTATAATTA+TGG | 0.338497 | 3.4:-92208616 | None:intergenic |
| TATGTTCATATTTACAAGTC+TGG | 0.362610 | 3.4:-92208493 | None:intergenic |
| ATAGTTGCTTTCTCTCCTAC+TGG | 0.374779 | 3.4:+92210699 | MS.gene42651:CDS |
| CCAAGCCTCACCTTACCATT+TGG | 0.382191 | 3.4:-92208639 | None:intergenic |
| AGTGGGAACAATCTCCTCTT+AGG | 0.384009 | 3.4:-92207711 | None:intergenic |
| GTAATTAATTTGTTTGCTGC+TGG | 0.388311 | 3.4:-92207097 | None:intergenic |
| GTCGTTTCATTTCGTTCTAC+AGG | 0.388709 | 3.4:-92207169 | None:intergenic |
| TAGGAGAGAAAGCAACTATA+AGG | 0.389667 | 3.4:-92210695 | None:intergenic |
| AGATTCGCGACATTCCTAAA+TGG | 0.397110 | 3.4:+92207248 | MS.gene42651:CDS |
| ATTAAAAGCTTCTGCTTGAA+TGG | 0.397535 | 3.4:-92209855 | None:intergenic |
| ATCAAAGTATCACCTTATAA+TGG | 0.404366 | 3.4:-92210778 | None:intergenic |
| GGCAGCAGGGTACCATTATA+AGG | 0.406094 | 3.4:+92210766 | MS.gene42651:CDS |
| ATGCTGAGGTTGAGCCTAGA+AGG | 0.419950 | 3.4:+92207008 | MS.gene42651:CDS |
| TCAAGAATTAAAGTGTGAAT+AGG | 0.423144 | 3.4:-92208821 | None:intergenic |
| CTCATTGGCAGCTATACAAT+TGG | 0.430101 | 3.4:+92209893 | MS.gene42651:CDS |
| AAATCTGAGCGAAAAGTTGA+TGG | 0.430864 | 3.4:+92207064 | MS.gene42651:CDS |
| AAAATATGTAATTTATCATA+TGG | 0.437584 | 3.4:-92208522 | None:intergenic |
| TCGGAAAGGTGTTCCTTGTA+TGG | 0.443532 | 3.4:-92207275 | None:intergenic |
| TCCCGGAAGAAGGTGGCAGC+AGG | 0.457757 | 3.4:+92210752 | MS.gene42651:CDS |
| TTCCCACTGGTAGCAAATCC+CGG | 0.459567 | 3.4:-92207130 | None:intergenic |
| TGGTATTGGCGTGACTTGTT+TGG | 0.463977 | 3.4:+92208572 | MS.gene42651:CDS |
| AACCAAAAGGTTGAAATAGC+TGG | 0.464893 | 3.4:+92208552 | MS.gene42651:CDS |
| TTGGATGCCAACCATTGTCC+AGG | 0.465014 | 3.4:+92208591 | MS.gene42651:CDS |
| AGCCTCACCTTACCATTTGG+AGG | 0.467125 | 3.4:-92208636 | None:intergenic |
| CCTAAATGGTGTGCCATACA+AGG | 0.467417 | 3.4:+92207262 | MS.gene42651:CDS |
| CTTTCCATGATTGAATGACT+TGG | 0.468183 | 3.4:-92208448 | None:intergenic |
| CTTAGAAGAGGAATCGCCTT+AGG | 0.471900 | 3.4:+92206950 | MS.gene42651:CDS |
| TTGCTTTCTCTCCTACTGGT+TGG | 0.480522 | 3.4:+92210703 | MS.gene42651:CDS |
| ATACTCTTTGAACCTCCAAA+TGG | 0.489494 | 3.4:+92208624 | MS.gene42651:CDS |
| CTCACCAAGTCATTCAATCA+TGG | 0.494648 | 3.4:+92208444 | MS.gene42651:CDS |
| AAGGTTGAAATAGCTGGTAT+TGG | 0.497008 | 3.4:+92208558 | MS.gene42651:CDS |
| CTCGCTTGAACTTGAAGAGG+AGG | 0.497023 | 3.4:-92206975 | None:intergenic |
| AGCTTGCAAGTGTCCACATA+GGG | 0.499017 | 3.4:-92210280 | None:intergenic |
| ATAGGACATGTCCGCAGTAA+AGG | 0.503218 | 3.4:-92208803 | None:intergenic |
| TACCTGTGGGTTGCAGTATG+TGG | 0.505307 | 3.4:-92208846 | None:intergenic |
| TATCTAGGCAGTACTTCATA+CGG | 0.511622 | 3.4:+92208745 | MS.gene42651:intron |
| AAAAGAAAGACTATTCTTGG+AGG | 0.527109 | 3.4:+92210127 | MS.gene42651:CDS |
| TTCATTTCGTTCTACAGGAG+GGG | 0.530245 | 3.4:-92207164 | None:intergenic |
| CTTTGAACCTCCAAATGGTA+AGG | 0.531062 | 3.4:+92208629 | MS.gene42651:CDS |
| TTTCATTTCGTTCTACAGGA+GGG | 0.539073 | 3.4:-92207165 | None:intergenic |
| AAAAGAAGTCTCCCGGAAGA+AGG | 0.539697 | 3.4:+92210742 | MS.gene42651:CDS |
| TTTGTGAATGCAGATTATCA+AGG | 0.542931 | 3.4:+92208420 | MS.gene42651:intron |
| AAGCTTGCAAGTGTCCACAT+AGG | 0.550517 | 3.4:-92210281 | None:intergenic |
| CGAAATGAAACGACCACAAG+TGG | 0.550706 | 3.4:+92207178 | MS.gene42651:CDS |
| GATGCTTTCAAATACCTAAG+AGG | 0.552944 | 3.4:+92207697 | MS.gene42651:CDS |
| ATATTCATGTTGCCCCTATG+TGG | 0.553521 | 3.4:+92210267 | MS.gene42651:CDS |
| TACAAGTCTGGCTGTAACAG+AGG | 0.554290 | 3.4:-92208481 | None:intergenic |
| TTCCGGGATTTGCTACCAGT+GGG | 0.558013 | 3.4:+92207128 | MS.gene42651:CDS |
| TTTCTCGCTTGAACTTGAAG+AGG | 0.559015 | 3.4:-92206978 | None:intergenic |
| GTTTCATTTCGTTCTACAGG+AGG | 0.563033 | 3.4:-92207166 | None:intergenic |
| TATGGAACCTGGACAATGGT+TGG | 0.563928 | 3.4:-92208598 | None:intergenic |
| TAAGAGGAGATTGTTCCCAC+TGG | 0.566874 | 3.4:+92207713 | MS.gene42651:CDS |
| ATGTTTGGAGTTTACAGAGG+AGG | 0.568194 | 3.4:+92210208 | MS.gene42651:CDS |
| ACTTGAAGAGGAGGTTCCTA+AGG | 0.571607 | 3.4:-92206966 | None:intergenic |
| GTTTCTCACACACTTCCACA+TGG | 0.572957 | 3.4:+92207735 | MS.gene42651:CDS |
| AGACTTGTAAATATGAACAT+AGG | 0.576180 | 3.4:+92208495 | MS.gene42651:CDS |
| ATCTAGGCAGTACTTCATAC+GGG | 0.578082 | 3.4:+92208746 | MS.gene42651:intron |
| TCGATCAGACGAGCCACTTG+TGG | 0.583119 | 3.4:-92207191 | None:intergenic |
| AAGAGTATAATTATGGAACC+TGG | 0.584062 | 3.4:-92208609 | None:intergenic |
| AAAATGTTTGGAGTTTACAG+AGG | 0.587038 | 3.4:+92210205 | MS.gene42651:CDS |
| TTTCCGGGATTTGCTACCAG+TGG | 0.590063 | 3.4:+92207127 | MS.gene42651:CDS |
| ATGTTGCTTACCACTCGGAA+AGG | 0.604789 | 3.4:-92207289 | None:intergenic |
| TTGCCAAATGTCCAACCAGT+AGG | 0.605425 | 3.4:-92210714 | None:intergenic |
| AGAAGTCTCCCGGAAGAAGG+TGG | 0.608363 | 3.4:+92210745 | MS.gene42651:CDS |
| CGAGAAACATGAGGATGCTG+AGG | 0.613762 | 3.4:+92206994 | MS.gene42651:CDS |
| GCTCTCTCAGAACTTAGAAG+AGG | 0.616459 | 3.4:+92206938 | MS.gene42651:intron |
| TGAGCGAAAAGTTGATGGAA+CGG | 0.620111 | 3.4:+92207069 | MS.gene42651:CDS |
| GTATGACTTTCCAAAACAAG+AGG | 0.622699 | 3.4:+92209808 | MS.gene42651:intron |
| CACCACATACTGCAACCCAC+AGG | 0.625431 | 3.4:+92208844 | MS.gene42651:CDS |
| CTTGCAATGGCTGACAGAAG+AGG | 0.630164 | 3.4:+92206390 | None:intergenic |
| CCCGGAAGAAGGTGGCAGCA+GGG | 0.632641 | 3.4:+92210753 | MS.gene42651:CDS |
| AGAAGGATTAGAAACCAGAA+AGG | 0.634777 | 3.4:+92207025 | MS.gene42651:CDS |
| ACTGGTTGGACATTTGGCAA+AGG | 0.642161 | 3.4:+92210717 | MS.gene42651:CDS |
| AAGTTCAAGCGAGAAACATG+AGG | 0.646074 | 3.4:+92206985 | MS.gene42651:CDS |
| TAATTATGGAACCTGGACAA+TGG | 0.648706 | 3.4:-92208602 | None:intergenic |
| AAACAGACTTACGGTCCATG+TGG | 0.660496 | 3.4:-92207750 | None:intergenic |
| TTACAGAGGAGGATATGCAG+TGG | 0.677061 | 3.4:+92210219 | MS.gene42651:CDS |
| GCACATATCAAGTCAATATG+CGG | 0.689672 | 3.4:+92210316 | MS.gene42651:CDS |
| GCTTGCAAGTGTCCACATAG+GGG | 0.691672 | 3.4:-92210279 | None:intergenic |
| TGGCAAACAATCCTTTACTG+CGG | 0.706170 | 3.4:+92208792 | MS.gene42651:CDS |
| ACAAGGAACACCTTTCCGAG+TGG | 0.728495 | 3.4:+92207279 | MS.gene42651:CDS |
| GAAGTGTGTGAGAAACCAGT+GGG | 0.728648 | 3.4:-92207728 | None:intergenic |
| GGAAGTGTGTGAGAAACCAG+TGG | 0.737251 | 3.4:-92207729 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATGTAATTTATCATA+TGG | - | chr3.4:92208525-92208544 | None:intergenic | 10.0% |
| !! | AATGAACTTAAATAAAATTA+AGG | - | chr3.4:92208951-92208970 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAAATATCAAC+AGG | - | chr3.4:92207326-92207345 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAATACATCTGA+TGG | - | chr3.4:92210657-92210676 | None:intergenic | 15.0% |
| !! | ATGCAAAAATTATTAGAAAA+AGG | - | chr3.4:92209526-92209545 | None:intergenic | 15.0% |
| !! | CATTAAAAGAAATAAACAAA+TGG | - | chr3.4:92209146-92209165 | None:intergenic | 15.0% |
| !! | TCAAAAAAAAAAGAACATAT+TGG | - | chr3.4:92209362-92209381 | None:intergenic | 15.0% |
| !! | TTACAATAAAAAGAACATAT+TGG | - | chr3.4:92209389-92209408 | None:intergenic | 15.0% |
| !!! | ATAAAATAATTTTTTTTCCC+AGG | + | chr3.4:92208329-92208348 | MS.gene42651:intron | 15.0% |
| !!! | ATTAATTACTGAATATTTTC+CGG | + | chr3.4:92207111-92207130 | MS.gene42651:CDS | 15.0% |
| !!! | TTAAATTAATTTGAATTTCG+AGG | - | chr3.4:92207955-92207974 | None:intergenic | 15.0% |
| !!! | TTATCTTTAAAAAGGTTTTT+AGG | - | chr3.4:92209269-92209288 | None:intergenic | 15.0% |
| !!! | TTCTTTTTATTGTAAGATTA+GGG | + | chr3.4:92209394-92209413 | MS.gene42651:intron | 15.0% |
| !!! | TTTATATCTTTATTTCTCAA+CGG | - | chr3.4:92209237-92209256 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTATTCAGAGT+CGG | + | chr3.4:92210667-92210686 | MS.gene42651:intron | 15.0% |
| !! | AAATATGTCATATAAAAGTG+TGG | + | chr3.4:92208162-92208181 | MS.gene42651:intron | 20.0% |
| !! | ATGAAATATATTGTGTCTTA+AGG | - | chr3.4:92207369-92207388 | None:intergenic | 20.0% |
| !! | ATTATTAGAAAAAGGCTAAA+TGG | - | chr3.4:92209518-92209537 | None:intergenic | 20.0% |
| !! | ATTGTAATAATCTGCTAATA+AGG | - | chr3.4:92208364-92208383 | None:intergenic | 20.0% |
| !! | ATTGTATAAAACATGATTGA+GGG | - | chr3.4:92207562-92207581 | None:intergenic | 20.0% |
| !! | GAACAATCAAATAAATTCAA+AGG | - | chr3.4:92206489-92206508 | None:intergenic | 20.0% |
| !! | GTTTAAAAAAACCATATTTG+AGG | - | chr3.4:92209571-92209590 | None:intergenic | 20.0% |
| !! | TTAAGACACAATATATTTCA+TGG | + | chr3.4:92207368-92207387 | MS.gene42651:intron | 20.0% |
| !!! | AACTAAAAAGTTGTGTTATT+CGG | - | chr3.4:92210616-92210635 | None:intergenic | 20.0% |
| !!! | ACAGTTTAGAATTTAAGTTT+TGG | + | chr3.4:92207999-92208018 | MS.gene42651:intron | 20.0% |
| !!! | ACTCTGATTGTAATAATTTT+CGG | - | chr3.4:92208237-92208256 | None:intergenic | 20.0% |
| !!! | CACATTATTTTAGTAAGTAT+AGG | + | chr3.4:92209681-92209700 | MS.gene42651:intron | 20.0% |
| !!! | GTTCTTTTTATTGTAAGATT+AGG | + | chr3.4:92209393-92209412 | MS.gene42651:intron | 20.0% |
| !!! | GTTTTTGTTTTTGTTTATCT+AGG | + | chr3.4:92208730-92208749 | MS.gene42651:intron | 20.0% |
| !!! | TAAACTCCAAACATTTTAAA+AGG | - | chr3.4:92210202-92210221 | None:intergenic | 20.0% |
| !!! | TAATATATTTCTGTAGGAAA+TGG | - | chr3.4:92209336-92209355 | None:intergenic | 20.0% |
| !!! | TGGTATTAATATATTTCTGT+AGG | - | chr3.4:92209342-92209361 | None:intergenic | 20.0% |
| !!! | TTAACTTTGAAATTTTACTC+TGG | + | chr3.4:92208982-92209001 | MS.gene42651:intron | 20.0% |
| !!! | TTAATTACTGAATATTTTCC+GGG | + | chr3.4:92207112-92207131 | MS.gene42651:CDS | 20.0% |
| ! | AAAAAAAGATAGGGCAAAAT+TGG | - | chr3.4:92207626-92207645 | None:intergenic | 25.0% |
| ! | AATACCAAAAAGTTAGCATA+TGG | - | chr3.4:92210372-92210391 | None:intergenic | 25.0% |
| ! | AATAGTTTAATACACTTCGT+CGG | - | chr3.4:92209465-92209484 | None:intergenic | 25.0% |
| ! | ACATTATGTAACGTAAAAGA+TGG | - | chr3.4:92207434-92207453 | None:intergenic | 25.0% |
| ! | ACGTTTCAAACAAATACTAA+AGG | - | chr3.4:92209981-92210000 | None:intergenic | 25.0% |
| ! | AGACTTGTAAATATGAACAT+AGG | + | chr3.4:92208495-92208514 | MS.gene42651:CDS | 25.0% |
| ! | AGATCAAAATATATTGAAGC+GGG | + | chr3.4:92209755-92209774 | MS.gene42651:intron | 25.0% |
| ! | ATCCACATCAAAAAAAGATA+GGG | - | chr3.4:92207635-92207654 | None:intergenic | 25.0% |
| ! | ATCTAAAAATATGTCTGGTT+TGG | + | chr3.4:92206707-92206726 | MS.gene42651:intron | 25.0% |
| ! | ATGGAGACAATAAAATTCAT+TGG | - | chr3.4:92208262-92208281 | None:intergenic | 25.0% |
| ! | ATTCGTGAATTGTTTCAATT+TGG | + | chr3.4:92207925-92207944 | MS.gene42651:intron | 25.0% |
| ! | CAACGATAATTAAGCTTATT+AGG | - | chr3.4:92208673-92208692 | None:intergenic | 25.0% |
| ! | CAATTCACGAATATTTAACA+AGG | - | chr3.4:92207917-92207936 | None:intergenic | 25.0% |
| ! | CATTGTATAAAACATGATTG+AGG | - | chr3.4:92207563-92207582 | None:intergenic | 25.0% |
| ! | CGTTTCAAACAAATACTAAA+GGG | - | chr3.4:92209980-92209999 | None:intergenic | 25.0% |
| ! | CTAATAAGCTTAATTATCGT+TGG | + | chr3.4:92208671-92208690 | MS.gene42651:intron | 25.0% |
| ! | GAGATCAAAATATATTGAAG+CGG | + | chr3.4:92209754-92209773 | MS.gene42651:intron | 25.0% |
| ! | GATCATTCATTATTCATATG+TGG | - | chr3.4:92208875-92208894 | None:intergenic | 25.0% |
| ! | GTTACCAAATTGTACTAAAT+TGG | - | chr3.4:92208046-92208065 | None:intergenic | 25.0% |
| ! | TAGAGATCTAAAAATATGTC+TGG | + | chr3.4:92206702-92206721 | MS.gene42651:intron | 25.0% |
| ! | TATGTTCATATTTACAAGTC+TGG | - | chr3.4:92208496-92208515 | None:intergenic | 25.0% |
| ! | TCAAGAATTAAAGTGTGAAT+AGG | - | chr3.4:92208824-92208843 | None:intergenic | 25.0% |
| ! | TTCAAGTACAAAAAGTAAAG+AGG | - | chr3.4:92206863-92206882 | None:intergenic | 25.0% |
| ! | TTGTATAAAACATGATTGAG+GGG | - | chr3.4:92207561-92207580 | None:intergenic | 25.0% |
| !! | AGGTTCAAAGAGTATAATTA+TGG | - | chr3.4:92208619-92208638 | None:intergenic | 25.0% |
| !! | CTAACACGTTTAATTTATAC+AGG | + | chr3.4:92207675-92207694 | MS.gene42651:intron | 25.0% |
| !! | CTCTGATTGTAATAATTTTC+GGG | - | chr3.4:92208236-92208255 | None:intergenic | 25.0% |
| !! | CTGGAAGTTTATCTTTAAAA+AGG | - | chr3.4:92209277-92209296 | None:intergenic | 25.0% |
| !! | TATTTCTGATTCCTTATTTC+CGG | + | chr3.4:92207453-92207472 | MS.gene42651:intron | 25.0% |
| !!! | AATTTGAAAATTAGCTCTGT+AGG | + | chr3.4:92206550-92206569 | MS.gene42651:intron | 25.0% |
| !!! | ATAGTTTTGAAGTGTAGATT+TGG | + | chr3.4:92210013-92210032 | MS.gene42651:intron | 25.0% |
| !!! | ATTGTAATAATTTTCGGGTA+GGG | - | chr3.4:92208231-92208250 | None:intergenic | 25.0% |
| !!! | ATTTGGTAACAGTTTAGTTT+TGG | + | chr3.4:92208056-92208075 | MS.gene42651:intron | 25.0% |
| !!! | TCTTTACTTTTTGTACTTGA+AGG | + | chr3.4:92206862-92206881 | MS.gene42651:intron | 25.0% |
| !!! | TGTGCTTTTTATGTTTCTAT+AGG | + | chr3.4:92210104-92210123 | MS.gene42651:intron | 25.0% |
| !!! | TTCTTAAAAGCATTTTAGCA+AGG | + | chr3.4:92209650-92209669 | MS.gene42651:intron | 25.0% |
| AAAAGAAAGACTATTCTTGG+AGG | + | chr3.4:92210127-92210146 | MS.gene42651:CDS | 30.0% | |
| AAACAAAAACAAAAACCAGC+TGG | - | chr3.4:92208726-92208745 | None:intergenic | 30.0% | |
| AAACATGTTTGCCTCAAATA+TGG | + | chr3.4:92209557-92209576 | MS.gene42651:intron | 30.0% | |
| AAAGGAACATATCTTAAAGC+AGG | + | chr3.4:92210404-92210423 | MS.gene42651:intron | 30.0% | |
| AATTCAAAGGAATAAGTCTC+TGG | - | chr3.4:92206476-92206495 | None:intergenic | 30.0% | |
| AATTCACTTTGACACTATCT+TGG | - | chr3.4:92209012-92209031 | None:intergenic | 30.0% | |
| AGGAAAAGAAAGACTATTCT+TGG | + | chr3.4:92210124-92210143 | MS.gene42651:intron | 30.0% | |
| ATAGTTTAATACACTTCGTC+GGG | - | chr3.4:92209464-92209483 | None:intergenic | 30.0% | |
| ATTAAAAGCTTCTGCTTGAA+TGG | - | chr3.4:92209858-92209877 | None:intergenic | 30.0% | |
| ATTCACTTTGACACTATCTT+GGG | - | chr3.4:92209011-92209030 | None:intergenic | 30.0% | |
| CAAATTGTACTAAATTGGTG+AGG | - | chr3.4:92208041-92208060 | None:intergenic | 30.0% | |
| CATCACATGATAAAACTCAT+TGG | + | chr3.4:92208279-92208298 | MS.gene42651:intron | 30.0% | |
| CTCACCAATTTAGTACAATT+TGG | + | chr3.4:92208039-92208058 | MS.gene42651:intron | 30.0% | |
| GATCCACATCAAAAAAAGAT+AGG | - | chr3.4:92207636-92207655 | None:intergenic | 30.0% | |
| GTCTTAAGGAAATGCATAAA+GGG | - | chr3.4:92207355-92207374 | None:intergenic | 30.0% | |
| TATATTGCATAGACACAGAA+AGG | - | chr3.4:92207843-92207862 | None:intergenic | 30.0% | |
| TGTAAAAGATCAATGTACCA+TGG | + | chr3.4:92206594-92206613 | MS.gene42651:intron | 30.0% | |
| TGTCTTAAGGAAATGCATAA+AGG | - | chr3.4:92207356-92207375 | None:intergenic | 30.0% | |
| TTGAAGGATCTCTTAAACAT+GGG | + | chr3.4:92206878-92206897 | MS.gene42651:intron | 30.0% | |
| TTTACAGCTTTCAAATGTGA+TGG | + | chr3.4:92210584-92210603 | MS.gene42651:intron | 30.0% | |
| TTTGTGAATGCAGATTATCA+AGG | + | chr3.4:92208420-92208439 | MS.gene42651:intron | 30.0% | |
| ! | AAAATGTTTGGAGTTTACAG+AGG | + | chr3.4:92210205-92210224 | MS.gene42651:CDS | 30.0% |
| ! | AAACATAAAAAGCACACACA+AGG | - | chr3.4:92210100-92210119 | None:intergenic | 30.0% |
| ! | AACATAAAAAGCACACACAA+GGG | - | chr3.4:92210099-92210118 | None:intergenic | 30.0% |
| ! | AAGAGTATAATTATGGAACC+TGG | - | chr3.4:92208612-92208631 | None:intergenic | 30.0% |
| ! | ACAACCATATGCTAACTTTT+TGG | + | chr3.4:92210365-92210384 | MS.gene42651:intron | 30.0% |
| ! | AGGTTTAAAGTTTCTGTTGA+TGG | + | chr3.4:92206827-92206846 | MS.gene42651:intron | 30.0% |
| ! | ATAAAATGTTGCTTACCACT+CGG | - | chr3.4:92207297-92207316 | None:intergenic | 30.0% |
| ! | CGAGTAATCATTTTGCAATT+AGG | + | chr3.4:92206632-92206651 | MS.gene42651:intron | 30.0% |
| ! | TATTTTGCCTCTAAACCAAA+AGG | + | chr3.4:92208539-92208558 | MS.gene42651:CDS | 30.0% |
| ! | TCTCATTAGTTTCCTGTAAT+TGG | - | chr3.4:92210063-92210082 | None:intergenic | 30.0% |
| ! | TTTTCGTTACAGTGAAGAAA+TGG | + | chr3.4:92208772-92208791 | MS.gene42651:CDS | 30.0% |
| ! | TTTTCTAGACCGTTTCAAAA+AGG | - | chr3.4:92207405-92207424 | None:intergenic | 30.0% |
| !! | AGAAGAAAGCCTTTTTGAAA+CGG | + | chr3.4:92207393-92207412 | MS.gene42651:intron | 30.0% |
| !! | CAATGAGTTTTATCATGTGA+TGG | - | chr3.4:92208281-92208300 | None:intergenic | 30.0% |
| !! | GTAATTAATTTGTTTGCTGC+TGG | - | chr3.4:92207100-92207119 | None:intergenic | 30.0% |
| !!! | AGCATGTACAATCTTTTTTC+TGG | - | chr3.4:92206921-92206940 | None:intergenic | 30.0% |
| !!! | ATTTCAACCTTTTGGTTTAG+AGG | - | chr3.4:92208549-92208568 | None:intergenic | 30.0% |
| !!! | GATTGTAATAATTTTCGGGT+AGG | - | chr3.4:92208232-92208251 | None:intergenic | 30.0% |
| !!! | GCATGTACAATCTTTTTTCT+GGG | - | chr3.4:92206920-92206939 | None:intergenic | 30.0% |
| !!! | GTTACGCCTTTTAAAATGTT+TGG | + | chr3.4:92210193-92210212 | MS.gene42651:CDS | 30.0% |
| !!! | TTGTAATAATTTTCGGGTAG+GGG | - | chr3.4:92208230-92208249 | None:intergenic | 30.0% |
| AAAGGTAAAAAGAAGTCTCC+CGG | + | chr3.4:92210735-92210754 | MS.gene42651:CDS | 35.0% | |
| AAATCTGAGCGAAAAGTTGA+TGG | + | chr3.4:92207064-92207083 | MS.gene42651:CDS | 35.0% | |
| AACCAAAAGGTTGAAATAGC+TGG | + | chr3.4:92208552-92208571 | MS.gene42651:CDS | 35.0% | |
| AAGGTTGAAATAGCTGGTAT+TGG | + | chr3.4:92208558-92208577 | MS.gene42651:CDS | 35.0% | |
| AATGATTACTCGACTCAACT+AGG | - | chr3.4:92206624-92206643 | None:intergenic | 35.0% | |
| AGAAGGATTAGAAACCAGAA+AGG | + | chr3.4:92207025-92207044 | MS.gene42651:CDS | 35.0% | |
| AGATAGGGCAAAATTGGTAA+TGG | - | chr3.4:92207620-92207639 | None:intergenic | 35.0% | |
| ATACTCTTTGAACCTCCAAA+TGG | + | chr3.4:92208624-92208643 | MS.gene42651:CDS | 35.0% | |
| CAGAGTTCCAATTTGTACTT+TGG | + | chr3.4:92208384-92208403 | MS.gene42651:intron | 35.0% | |
| CTAAACTACCTTTAGCTGTT+TGG | + | chr3.4:92208196-92208215 | MS.gene42651:intron | 35.0% | |
| CTTGAAGGATCTCTTAAACA+TGG | + | chr3.4:92206877-92206896 | MS.gene42651:intron | 35.0% | |
| CTTTCCATGATTGAATGACT+TGG | - | chr3.4:92208451-92208470 | None:intergenic | 35.0% | |
| GAGTTCAATTCATCTCATTC+TGG | + | chr3.4:92209918-92209937 | MS.gene42651:intron | 35.0% | |
| GATGCTTTCAAATACCTAAG+AGG | + | chr3.4:92207697-92207716 | MS.gene42651:CDS | 35.0% | |
| GCACATATCAAGTCAATATG+CGG | + | chr3.4:92210316-92210335 | MS.gene42651:CDS | 35.0% | |
| GTATGACTTTCCAAAACAAG+AGG | + | chr3.4:92209808-92209827 | MS.gene42651:intron | 35.0% | |
| TAATAAGGAGCTAAACACCT+GGG | - | chr3.4:92208349-92208368 | None:intergenic | 35.0% | |
| TAATTATGGAACCTGGACAA+TGG | - | chr3.4:92208605-92208624 | None:intergenic | 35.0% | |
| TAGGAGAGAAAGCAACTATA+AGG | - | chr3.4:92210698-92210717 | None:intergenic | 35.0% | |
| TATCTAGGCAGTACTTCATA+CGG | + | chr3.4:92208745-92208764 | MS.gene42651:intron | 35.0% | |
| TATGGTTGTGATAGAGAAAC+AGG | - | chr3.4:92210354-92210373 | None:intergenic | 35.0% | |
| TCACAGTGCAAGAAAATAGT+TGG | - | chr3.4:92209111-92209130 | None:intergenic | 35.0% | |
| TGGTAATACTGTCCAATTAC+AGG | + | chr3.4:92210048-92210067 | MS.gene42651:intron | 35.0% | |
| TTCAATCTGTGTCATCTTCT+CGG | + | chr3.4:92207789-92207808 | MS.gene42651:intron | 35.0% | |
| TTTCATTTCGTTCTACAGGA+GGG | - | chr3.4:92207168-92207187 | None:intergenic | 35.0% | |
| ! | ACATAAAAAGCACACACAAG+GGG | - | chr3.4:92210098-92210117 | None:intergenic | 35.0% |
| ! | ATTCCTTATTTCCGGAAAAG+GGG | + | chr3.4:92207461-92207480 | MS.gene42651:intron | 35.0% |
| ! | CATTGATCTTTTACAGCAAG+TGG | - | chr3.4:92206589-92206608 | None:intergenic | 35.0% |
| ! | CATTGCATAGCATCAGTTTT+AGG | + | chr3.4:92206438-92206457 | MS.gene42651:intron | 35.0% |
| ! | GATTCCTTATTTCCGGAAAA+GGG | + | chr3.4:92207460-92207479 | MS.gene42651:intron | 35.0% |
| ! | GTCAGTTCTAGTGAAACAAT+GGG | - | chr3.4:92208704-92208723 | None:intergenic | 35.0% |
| ! | TGATTCCTTATTTCCGGAAA+AGG | + | chr3.4:92207459-92207478 | MS.gene42651:intron | 35.0% |
| ! | TTGACTCGAGAAAACATGTT+TGG | - | chr3.4:92209054-92209073 | None:intergenic | 35.0% |
| !! | TACCAGCTATTTCAACCTTT+TGG | - | chr3.4:92208557-92208576 | None:intergenic | 35.0% |
| !! | TGTATTACAGCCTCTTGTTT+TGG | - | chr3.4:92209821-92209840 | None:intergenic | 35.0% |
| !! | TTCTGGTTTCTAATCCTTCT+AGG | - | chr3.4:92207025-92207044 | None:intergenic | 35.0% |
| !!! | ACAGTTTAGTTTTGGACAAG+TGG | + | chr3.4:92208064-92208083 | MS.gene42651:intron | 35.0% |
| !!! | TGCCCTATCTTTTTTTGATG+TGG | + | chr3.4:92207630-92207649 | MS.gene42651:intron | 35.0% |
| AACATGGGTATAACTGCACT+TGG | + | chr3.4:92206893-92206912 | MS.gene42651:intron | 40.0% | |
| AAGCTGTAAAACTGCTTAGC+AGG | - | chr3.4:92210574-92210593 | None:intergenic | 40.0% | |
| AAGTTCAAGCGAGAAACATG+AGG | + | chr3.4:92206985-92207004 | MS.gene42651:CDS | 40.0% | |
| AGAAAAGTTTACCAGCTACC+TGG | + | chr3.4:92207513-92207532 | MS.gene42651:intron | 40.0% | |
| AGACAATTCGAAAGAGAGAG+CGG | + | chr3.4:92208109-92208128 | MS.gene42651:intron | 40.0% | |
| AGATTCGCGACATTCCTAAA+TGG | + | chr3.4:92207248-92207267 | MS.gene42651:CDS | 40.0% | |
| AGATTTGGCAGTTGTGTTTG+TGG | + | chr3.4:92210028-92210047 | MS.gene42651:intron | 40.0% | |
| ATATTCATGTTGCCCCTATG+TGG | + | chr3.4:92210267-92210286 | MS.gene42651:CDS | 40.0% | |
| ATCTAGGCAGTACTTCATAC+GGG | + | chr3.4:92208746-92208765 | MS.gene42651:intron | 40.0% | |
| ATTACTCGACTCAACTAGGT+TGG | - | chr3.4:92206620-92206639 | None:intergenic | 40.0% | |
| CACATGCAGAAACAGACTTA+CGG | - | chr3.4:92207762-92207781 | None:intergenic | 40.0% | |
| CATGTTGCAATTTGCCTTTC+TGG | - | chr3.4:92207042-92207061 | None:intergenic | 40.0% | |
| CCAAAGCAAACACTTGATAC+AGG | - | chr3.4:92208923-92208942 | None:intergenic | 40.0% | |
| CCAACAGCCAAAGTACAAAT+TGG | - | chr3.4:92208394-92208413 | None:intergenic | 40.0% | |
| CCAATTTGTACTTTGGCTGT+TGG | + | chr3.4:92208391-92208410 | MS.gene42651:intron | 40.0% | |
| CCTGTATCAAGTGTTTGCTT+TGG | + | chr3.4:92208920-92208939 | MS.gene42651:intron | 40.0% | |
| CTAATAAGGAGCTAAACACC+TGG | - | chr3.4:92208350-92208369 | None:intergenic | 40.0% | |
| CTCACCAAGTCATTCAATCA+TGG | + | chr3.4:92208444-92208463 | MS.gene42651:CDS | 40.0% | |
| CTCATTGGCAGCTATACAAT+TGG | + | chr3.4:92209893-92209912 | MS.gene42651:CDS | 40.0% | |
| CTTGTTCAGAATGCTACTCT+AGG | - | chr3.4:92206658-92206677 | None:intergenic | 40.0% | |
| CTTTGAACCTCCAAATGGTA+AGG | + | chr3.4:92208629-92208648 | MS.gene42651:CDS | 40.0% | |
| GAGAGACATTTCATGCAAAC+AGG | - | chr3.4:92206786-92206805 | None:intergenic | 40.0% | |
| GTCGTTTCATTTCGTTCTAC+AGG | - | chr3.4:92207172-92207191 | None:intergenic | 40.0% | |
| GTTTCATTTCGTTCTACAGG+AGG | - | chr3.4:92207169-92207188 | None:intergenic | 40.0% | |
| TCAAAGTCAGACATGCACAT+TGG | - | chr3.4:92209304-92209323 | None:intergenic | 40.0% | |
| TCATATGTGGACTTACCTGT+GGG | - | chr3.4:92208862-92208881 | None:intergenic | 40.0% | |
| TGCCAATGAGAAAAAGAGTC+CGG | - | chr3.4:92209883-92209902 | None:intergenic | 40.0% | |
| TGGCAAACAATCCTTTACTG+CGG | + | chr3.4:92208792-92208811 | MS.gene42651:CDS | 40.0% | |
| TTCATATGTGGACTTACCTG+TGG | - | chr3.4:92208863-92208882 | None:intergenic | 40.0% | |
| TTCATTTCGTTCTACAGGAG+GGG | - | chr3.4:92207167-92207186 | None:intergenic | 40.0% | |
| TTTCTCGCTTGAACTTGAAG+AGG | - | chr3.4:92206981-92207000 | None:intergenic | 40.0% | |
| ! | AAGCAGAAGCTTTTAATCCC+CGG | + | chr3.4:92209861-92209880 | MS.gene42651:CDS | 40.0% |
| ! | AATGCCTTGTTGGCTGATAA+AGG | + | chr3.4:92210525-92210544 | MS.gene42651:intron | 40.0% |
| ! | ATAGTTGCTTTCTCTCCTAC+TGG | + | chr3.4:92210699-92210718 | MS.gene42651:CDS | 40.0% |
| ! | ATGTTTGGAGTTTACAGAGG+AGG | + | chr3.4:92210208-92210227 | MS.gene42651:CDS | 40.0% |
| ! | CAACTGTTTGTTAGAGGCAT+TGG | + | chr3.4:92209071-92209090 | MS.gene42651:intron | 40.0% |
| ! | CTGCTGTCACATACACTTTT+TGG | - | chr3.4:92210169-92210188 | None:intergenic | 40.0% |
| ! | GCTGGTAAACTTTTCTTGAC+TGG | - | chr3.4:92207509-92207528 | None:intergenic | 40.0% |
| ! | GGTCAGTTCTAGTGAAACAA+TGG | - | chr3.4:92208705-92208724 | None:intergenic | 40.0% |
| ! | TCGAGTCAACTGTTTGTTAG+AGG | + | chr3.4:92209065-92209084 | MS.gene42651:intron | 40.0% |
| ! | TTCCTTATTTCCGGAAAAGG+GGG | + | chr3.4:92207462-92207481 | MS.gene42651:intron | 40.0% |
| ! | TTGCTTTGCTTCGTTGGTAA+AGG | + | chr3.4:92206807-92206826 | MS.gene42651:intron | 40.0% |
| !! | AGACACAGAAAGGCATTCAT+TGG | - | chr3.4:92207833-92207852 | None:intergenic | 40.0% |
| !! | GACACAGAAAGGCATTCATT+GGG | - | chr3.4:92207832-92207851 | None:intergenic | 40.0% |
| !! | TATCAGCCAACAAGGCATTT+TGG | - | chr3.4:92210524-92210543 | None:intergenic | 40.0% |
| !! | TGAGCGAAAAGTTGATGGAA+CGG | + | chr3.4:92207069-92207088 | MS.gene42651:CDS | 40.0% |
| AAAAGAAGTCTCCCGGAAGA+AGG | + | chr3.4:92210742-92210761 | MS.gene42651:CDS | 45.0% | |
| AAACAGACTTACGGTCCATG+TGG | - | chr3.4:92207753-92207772 | None:intergenic | 45.0% | |
| AACCTCCAAATGGTAAGGTG+AGG | + | chr3.4:92208634-92208653 | MS.gene42651:intron | 45.0% | |
| AACTGCTTAGCAGGTAAACC+AGG | - | chr3.4:92210565-92210584 | None:intergenic | 45.0% | |
| AAGCTTGCAAGTGTCCACAT+AGG | - | chr3.4:92210284-92210303 | None:intergenic | 45.0% | |
| AAGTTTACCAGCTACCTGGA+TGG | + | chr3.4:92207517-92207536 | MS.gene42651:intron | 45.0% | |
| ACTGGTTGGACATTTGGCAA+AGG | + | chr3.4:92210717-92210736 | MS.gene42651:CDS | 45.0% | |
| ACTTGAAGAGGAGGTTCCTA+AGG | - | chr3.4:92206969-92206988 | None:intergenic | 45.0% | |
| AGCTTGCAAGTGTCCACATA+GGG | - | chr3.4:92210283-92210302 | None:intergenic | 45.0% | |
| AGTGGGAACAATCTCCTCTT+AGG | - | chr3.4:92207714-92207733 | None:intergenic | 45.0% | |
| ATAGGACATGTCCGCAGTAA+AGG | - | chr3.4:92208806-92208825 | None:intergenic | 45.0% | |
| CCAATGAGAAAAAGAGTCCG+GGG | - | chr3.4:92209881-92209900 | None:intergenic | 45.0% | |
| CCTAAATGGTGTGCCATACA+AGG | + | chr3.4:92207262-92207281 | MS.gene42651:CDS | 45.0% | |
| CCTTGTATGGCACACCATTT+AGG | - | chr3.4:92207265-92207284 | None:intergenic | 45.0% | |
| CGAAATGAAACGACCACAAG+TGG | + | chr3.4:92207178-92207197 | MS.gene42651:CDS | 45.0% | |
| CTCAGTTTGAATTGCCATCC+AGG | - | chr3.4:92207534-92207553 | None:intergenic | 45.0% | |
| CTCTCTTTGCTTTGCTTCGT+TGG | + | chr3.4:92206801-92206820 | MS.gene42651:intron | 45.0% | |
| CTTAGAAGAGGAATCGCCTT+AGG | + | chr3.4:92206950-92206969 | MS.gene42651:CDS | 45.0% | |
| GAAGTGTGTGAGAAACCAGT+GGG | - | chr3.4:92207731-92207750 | None:intergenic | 45.0% | |
| GCCAATGAGAAAAAGAGTCC+GGG | - | chr3.4:92209882-92209901 | None:intergenic | 45.0% | |
| GCTCTCTCAGAACTTAGAAG+AGG | + | chr3.4:92206938-92206957 | MS.gene42651:intron | 45.0% | |
| GGATCCTTTATCAGCCAACA+AGG | - | chr3.4:92210532-92210551 | None:intergenic | 45.0% | |
| GTTTCTCACACACTTCCACA+TGG | + | chr3.4:92207735-92207754 | MS.gene42651:CDS | 45.0% | |
| TAAGAGGAGATTGTTCCCAC+TGG | + | chr3.4:92207713-92207732 | MS.gene42651:CDS | 45.0% | |
| TACAAGTCTGGCTGTAACAG+AGG | - | chr3.4:92208484-92208503 | None:intergenic | 45.0% | |
| TATGGAACCTGGACAATGGT+TGG | - | chr3.4:92208601-92208620 | None:intergenic | 45.0% | |
| TCCATGCCAAAATGCCTTGT+TGG | + | chr3.4:92210515-92210534 | MS.gene42651:intron | 45.0% | |
| TTACAGAGGAGGATATGCAG+TGG | + | chr3.4:92210219-92210238 | MS.gene42651:CDS | 45.0% | |
| TTGCCAAATGTCCAACCAGT+AGG | - | chr3.4:92210717-92210736 | None:intergenic | 45.0% | |
| TTGCTTTCTCTCCTACTGGT+TGG | + | chr3.4:92210703-92210722 | MS.gene42651:CDS | 45.0% | |
| TTTCACTAGAACTGACCAGC+TGG | + | chr3.4:92208708-92208727 | MS.gene42651:intron | 45.0% | |
| ! | AACCCCCTTTTCCGGAAATA+AGG | - | chr3.4:92207467-92207486 | None:intergenic | 45.0% |
| ! | ATGTTGCTTACCACTCGGAA+AGG | - | chr3.4:92207292-92207311 | None:intergenic | 45.0% |
| ! | CACATGAAAACCCCCTTTTC+CGG | - | chr3.4:92207475-92207494 | None:intergenic | 45.0% |
| ! | GGAAAAGGGGGTTTTCATGT+GGG | + | chr3.4:92207474-92207493 | MS.gene42651:intron | 45.0% |
| ! | TCTCCTACTGGTTGGACATT+TGG | + | chr3.4:92210711-92210730 | MS.gene42651:CDS | 45.0% |
| !! | TACCTTTAGCTGTTTGGTGC+CGG | + | chr3.4:92208202-92208221 | MS.gene42651:intron | 45.0% |
| !! | TCGGAAAGGTGTTCCTTGTA+TGG | - | chr3.4:92207278-92207297 | None:intergenic | 45.0% |
| !! | TGGTATTGGCGTGACTTGTT+TGG | + | chr3.4:92208572-92208591 | MS.gene42651:CDS | 45.0% |
| !!! | GGCAGAAACTTTTTTCCCAC+TGG | - | chr3.4:92207146-92207165 | None:intergenic | 45.0% |
| !! | ATATATATATATATATAGTT+TGG | + | chr3.4:92207885-92207904 | MS.gene42651:intron | 5.0% |
| AAGGATCCACAGTTGCTACC+TGG | + | chr3.4:92210544-92210563 | MS.gene42651:intron | 50.0% | |
| ACAAGGAACACCTTTCCGAG+TGG | + | chr3.4:92207279-92207298 | MS.gene42651:CDS | 50.0% | |
| AGACATGCACATTGGCACTC+TGG | - | chr3.4:92209296-92209315 | None:intergenic | 50.0% | |
| AGCCTCACCTTACCATTTGG+AGG | - | chr3.4:92208639-92208658 | None:intergenic | 50.0% | |
| ATGCTGAGGTTGAGCCTAGA+AGG | + | chr3.4:92207008-92207027 | MS.gene42651:CDS | 50.0% | |
| CCAAATGGTAAGGTGAGGCT+TGG | + | chr3.4:92208639-92208658 | MS.gene42651:intron | 50.0% | |
| CCAAGCCTCACCTTACCATT+TGG | - | chr3.4:92208642-92208661 | None:intergenic | 50.0% | |
| CGAGAAACATGAGGATGCTG+AGG | + | chr3.4:92206994-92207013 | MS.gene42651:CDS | 50.0% | |
| CTCGCTTGAACTTGAAGAGG+AGG | - | chr3.4:92206978-92206997 | None:intergenic | 50.0% | |
| GCTTGCAAGTGTCCACATAG+GGG | - | chr3.4:92210282-92210301 | None:intergenic | 50.0% | |
| GGTAAACCAGGTAGCAACTG+TGG | - | chr3.4:92210553-92210572 | None:intergenic | 50.0% | |
| TGAATTGCCATCCAGGTAGC+TGG | - | chr3.4:92207527-92207546 | None:intergenic | 50.0% | |
| TTCCCACTGGTAGCAAATCC+CGG | - | chr3.4:92207133-92207152 | None:intergenic | 50.0% | |
| TTGGATGCCAACCATTGTCC+AGG | + | chr3.4:92208591-92208610 | MS.gene42651:CDS | 50.0% | |
| ! | CCCCGGACTCTTTTTCTCAT+TGG | + | chr3.4:92209878-92209897 | MS.gene42651:CDS | 50.0% |
| ! | CGGAAAAGGGGGTTTTCATG+TGG | + | chr3.4:92207473-92207492 | MS.gene42651:intron | 50.0% |
| ! | GGAAGTGTGTGAGAAACCAG+TGG | - | chr3.4:92207732-92207751 | None:intergenic | 50.0% |
| ! | TACCTGTGGGTTGCAGTATG+TGG | - | chr3.4:92208849-92208868 | None:intergenic | 50.0% |
| !! | GCCAACAAGGCATTTTGGCA+TGG | - | chr3.4:92210519-92210538 | None:intergenic | 50.0% |
| !! | TTCCGGGATTTGCTACCAGT+GGG | + | chr3.4:92207128-92207147 | MS.gene42651:CDS | 50.0% |
| !! | TTTCCGGGATTTGCTACCAG+TGG | + | chr3.4:92207127-92207146 | MS.gene42651:CDS | 50.0% |
| !!! | TAATTTTCGGGTAGGGGAGC+CGG | - | chr3.4:92208224-92208243 | None:intergenic | 50.0% |
| AGAAGTCTCCCGGAAGAAGG+TGG | + | chr3.4:92210745-92210764 | MS.gene42651:CDS | 55.0% | |
| AGCCGGCACCAAACAGCTAA+AGG | - | chr3.4:92208207-92208226 | None:intergenic | 55.0% | |
| CACCACATACTGCAACCCAC+AGG | + | chr3.4:92208844-92208863 | MS.gene42651:CDS | 55.0% | |
| TCGATCAGACGAGCCACTTG+TGG | - | chr3.4:92207194-92207213 | None:intergenic | 55.0% | |
| ! | CGACTCAACTAGGTTGGCCA+TGG | - | chr3.4:92206614-92206633 | None:intergenic | 55.0% |
| ACCCTGCTGCCACCTTCTTC+CGG | - | chr3.4:92210757-92210776 | None:intergenic | 60.0% | |
| AGAGCGGCAGTGCTGTGCAT+CGG | + | chr3.4:92208125-92208144 | MS.gene42651:intron | 60.0% | |
| CCCGGAAGAAGGTGGCAGCA+GGG | + | chr3.4:92210753-92210772 | MS.gene42651:CDS | 65.0% | |
| CCCTGCTGCCACCTTCTTCC+GGG | - | chr3.4:92210756-92210775 | None:intergenic | 65.0% | |
| TCCCGGAAGAAGGTGGCAGC+AGG | + | chr3.4:92210752-92210771 | MS.gene42651:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 92206396 | 92210787 | 92206396 | ID=MS.gene42651 |
| chr3.4 | mRNA | 92206396 | 92210787 | 92206396 | ID=MS.gene42651.t1;Parent=MS.gene42651 |
| chr3.4 | exon | 92206396 | 92206411 | 92206396 | ID=MS.gene42651.t1.exon1;Parent=MS.gene42651.t1 |
| chr3.4 | CDS | 92206396 | 92206411 | 92206396 | ID=cds.MS.gene42651.t1;Parent=MS.gene42651.t1 |
| chr3.4 | exon | 92206948 | 92207300 | 92206948 | ID=MS.gene42651.t1.exon2;Parent=MS.gene42651.t1 |
| chr3.4 | CDS | 92206948 | 92207300 | 92206948 | ID=cds.MS.gene42651.t1;Parent=MS.gene42651.t1 |
| chr3.4 | exon | 92207697 | 92207760 | 92207697 | ID=MS.gene42651.t1.exon3;Parent=MS.gene42651.t1 |
| chr3.4 | CDS | 92207697 | 92207760 | 92207697 | ID=cds.MS.gene42651.t1;Parent=MS.gene42651.t1 |
| chr3.4 | exon | 92208433 | 92208650 | 92208433 | ID=MS.gene42651.t1.exon4;Parent=MS.gene42651.t1 |
| chr3.4 | CDS | 92208433 | 92208650 | 92208433 | ID=cds.MS.gene42651.t1;Parent=MS.gene42651.t1 |
| chr3.4 | exon | 92208752 | 92208865 | 92208752 | ID=MS.gene42651.t1.exon5;Parent=MS.gene42651.t1 |
| chr3.4 | CDS | 92208752 | 92208865 | 92208752 | ID=cds.MS.gene42651.t1;Parent=MS.gene42651.t1 |
| chr3.4 | exon | 92209809 | 92209914 | 92209809 | ID=MS.gene42651.t1.exon6;Parent=MS.gene42651.t1 |
| chr3.4 | CDS | 92209809 | 92209914 | 92209809 | ID=cds.MS.gene42651.t1;Parent=MS.gene42651.t1 |
| chr3.4 | exon | 92210126 | 92210337 | 92210126 | ID=MS.gene42651.t1.exon7;Parent=MS.gene42651.t1 |
| chr3.4 | CDS | 92210126 | 92210337 | 92210126 | ID=cds.MS.gene42651.t1;Parent=MS.gene42651.t1 |
| chr3.4 | exon | 92210684 | 92210787 | 92210684 | ID=MS.gene42651.t1.exon8;Parent=MS.gene42651.t1 |
| chr3.4 | CDS | 92210684 | 92210787 | 92210684 | ID=cds.MS.gene42651.t1;Parent=MS.gene42651.t1 |
| Gene Sequence |
| Protein sequence |
