Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44386.t1 | XP_003613238.1 | 97.7 | 574 | 9 | 2 | 1 | 573 | 1 | 571 | 1.20E-301 | 1045 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44386.t1 | G7K1E3 | 97.7 | 574 | 9 | 2 | 1 | 573 | 1 | 571 | 9.0e-302 | 1045.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene44386 | 0.846509 | 2.08E-59 | -1.69E-46 |
| MS.gene049418 | MS.gene44386 | 0.809416 | 1.91E-50 | -1.69E-46 |
| MS.gene049660 | MS.gene44386 | 0.803989 | 2.68E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene44386 | 0.894505 | 2.32E-75 | -1.69E-46 |
| MS.gene050297 | MS.gene44386 | 0.865138 | 7.34E-65 | -1.69E-46 |
| MS.gene05054 | MS.gene44386 | 0.802244 | 6.15E-49 | -1.69E-46 |
| MS.gene050648 | MS.gene44386 | 0.815794 | 7.70E-52 | -1.69E-46 |
| MS.gene051094 | MS.gene44386 | 0.818997 | 1.46E-52 | -1.69E-46 |
| MS.gene051629 | MS.gene44386 | 0.850518 | 1.61E-60 | -1.69E-46 |
| MS.gene051742 | MS.gene44386 | 0.808454 | 3.07E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene44386 | 0.818736 | 1.68E-52 | -1.69E-46 |
| MS.gene051955 | MS.gene44386 | 0.839475 | 1.55E-57 | -1.69E-46 |
| MS.gene052143 | MS.gene44386 | 0.816383 | 5.69E-52 | -1.69E-46 |
| MS.gene052367 | MS.gene44386 | 0.859337 | 4.44E-63 | -1.69E-46 |
| MS.gene053348 | MS.gene44386 | 0.827243 | 1.74E-54 | -1.69E-46 |
| MS.gene053416 | MS.gene44386 | 0.863396 | 2.57E-64 | -1.69E-46 |
| MS.gene053417 | MS.gene44386 | 0.867083 | 1.78E-65 | -1.69E-46 |
| MS.gene05369 | MS.gene44386 | 0.819985 | 8.71E-53 | -1.69E-46 |
| MS.gene053929 | MS.gene44386 | 0.813016 | 3.17E-51 | -1.69E-46 |
| MS.gene055578 | MS.gene44386 | 0.825656 | 4.16E-54 | -1.69E-46 |
| MS.gene055579 | MS.gene44386 | 0.801725 | 7.86E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene44386 | 0.833686 | 4.63E-56 | -1.69E-46 |
| MS.gene056041 | MS.gene44386 | 0.869286 | 3.47E-66 | -1.69E-46 |
| MS.gene056042 | MS.gene44386 | 0.820014 | 8.58E-53 | -1.69E-46 |
| MS.gene056526 | MS.gene44386 | 0.85908 | 5.30E-63 | -1.69E-46 |
| MS.gene057458 | MS.gene44386 | 0.812835 | 3.47E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene44386 | 0.800293 | 1.54E-48 | -1.69E-46 |
| MS.gene058196 | MS.gene44386 | 0.863493 | 2.39E-64 | -1.69E-46 |
| MS.gene058197 | MS.gene44386 | 0.870055 | 1.95E-66 | -1.69E-46 |
| MS.gene058198 | MS.gene44386 | 0.867406 | 1.40E-65 | -1.69E-46 |
| MS.gene058827 | MS.gene44386 | 0.832699 | 8.15E-56 | -1.69E-46 |
| MS.gene059300 | MS.gene44386 | 0.868313 | 7.17E-66 | -1.69E-46 |
| MS.gene059553 | MS.gene44386 | 0.812456 | 4.20E-51 | -1.69E-46 |
| MS.gene060473 | MS.gene44386 | 0.899711 | 1.51E-77 | -1.69E-46 |
| MS.gene060565 | MS.gene44386 | 0.902684 | 7.53E-79 | -1.69E-46 |
| MS.gene06057 | MS.gene44386 | 0.865677 | 4.97E-65 | -1.69E-46 |
| MS.gene06093 | MS.gene44386 | 0.809175 | 2.15E-50 | -1.69E-46 |
| MS.gene061099 | MS.gene44386 | 0.810569 | 1.08E-50 | -1.69E-46 |
| MS.gene061260 | MS.gene44386 | 0.868662 | 5.53E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44386.t1 | MTR_5g034370 | 98.432 | 574 | 5 | 2 | 1 | 573 | 1 | 571 | 0.0 | 1157 |
| MS.gene44386.t1 | MTR_5g034380 | 96.154 | 78 | 3 | 0 | 496 | 573 | 64 | 141 | 2.84e-47 | 162 |
| MS.gene44386.t1 | MTR_5g034380 | 83.333 | 66 | 10 | 1 | 356 | 421 | 1 | 65 | 1.29e-27 | 108 |
| MS.gene44386.t1 | MTR_0050s0010 | 26.679 | 536 | 315 | 16 | 1 | 531 | 1 | 463 | 3.00e-45 | 168 |
| MS.gene44386.t1 | MTR_2g099095 | 60.331 | 121 | 48 | 0 | 1 | 121 | 1 | 121 | 1.03e-43 | 166 |
| MS.gene44386.t1 | MTR_4g068050 | 57.025 | 121 | 51 | 1 | 1 | 121 | 1 | 120 | 2.23e-41 | 159 |
| MS.gene44386.t1 | MTR_4g112035 | 49.587 | 121 | 60 | 1 | 1 | 121 | 1 | 120 | 2.06e-32 | 132 |
| MS.gene44386.t1 | MTR_2g062300 | 40.650 | 123 | 66 | 3 | 1 | 121 | 1 | 118 | 6.19e-20 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44386.t1 | AT1G23790 | 51.014 | 592 | 197 | 16 | 1 | 573 | 1 | 518 | 0.0 | 530 |
| MS.gene44386.t1 | AT1G70340 | 48.571 | 595 | 199 | 18 | 1 | 573 | 1 | 510 | 1.57e-167 | 486 |
| MS.gene44386.t1 | AT3G14170 | 29.245 | 530 | 283 | 18 | 1 | 529 | 1 | 439 | 4.33e-48 | 175 |
| MS.gene44386.t1 | AT3G14170 | 29.434 | 530 | 281 | 18 | 1 | 529 | 1 | 438 | 4.34e-48 | 175 |
| MS.gene44386.t1 | AT1G08760 | 59.504 | 121 | 48 | 1 | 1 | 121 | 1 | 120 | 4.35e-42 | 162 |
| MS.gene44386.t1 | AT1G08760 | 23.849 | 239 | 143 | 5 | 314 | 515 | 419 | 655 | 4.21e-11 | 66.2 |
| MS.gene44386.t1 | AT4G13370 | 55.372 | 121 | 53 | 1 | 1 | 121 | 1 | 120 | 5.60e-39 | 152 |
| MS.gene44386.t1 | AT3G19610 | 44.628 | 121 | 65 | 2 | 1 | 120 | 29 | 148 | 1.77e-27 | 117 |
| MS.gene44386.t1 | AT2G31920 | 41.732 | 127 | 64 | 4 | 1 | 119 | 1 | 125 | 2.14e-20 | 95.5 |
Find 134 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACCTACATTTGACTTAAA+TGG | 0.101600 | 5.1:-25301989 | None:intergenic |
| TACTAATCAAAGGGAGATTT+TGG | 0.162928 | 5.1:+25303717 | MS.gene44386:CDS |
| TGGTACACCTGAACCTTTAA+TGG | 0.164535 | 5.1:+25301577 | MS.gene44386:CDS |
| TTTGAGCCTGGGCCTGGGTC+TGG | 0.176021 | 5.1:-25301616 | None:intergenic |
| TACATGTTTGAGCCTGGGCC+TGG | 0.220419 | 5.1:-25301622 | None:intergenic |
| AGAAGCTGGGAATTGGTTTA+TGG | 0.224742 | 5.1:+25303846 | MS.gene44386:CDS |
| GTTAGAGGCTCTTGGGGTAC+TGG | 0.256256 | 5.1:+25301656 | MS.gene44386:CDS |
| TTCACCTGTTCCGGTTCTTA+AGG | 0.274220 | 5.1:+25301520 | MS.gene44386:CDS |
| CGAGCAATCTGTGCTGCTTT+AGG | 0.274805 | 5.1:-25304018 | None:intergenic |
| TTGATGTAAAAGCCTTGTTT+TGG | 0.305785 | 5.1:-25301380 | None:intergenic |
| CCCAAGGAGCTGAGTCTTGC+TGG | 0.308213 | 5.1:-25302920 | None:intergenic |
| CTTAGGAAAAGTTGTGCTTT+TGG | 0.311861 | 5.1:+25301899 | MS.gene44386:CDS |
| TTGAGCCTGGGCCTGGGTCT+GGG | 0.312521 | 5.1:-25301615 | None:intergenic |
| GGGAGGAGTAATGGTGGAAT+TGG | 0.318272 | 5.1:+25301791 | MS.gene44386:CDS |
| CTTAGGCCCATTAAAGGTTC+AGG | 0.325269 | 5.1:-25301584 | None:intergenic |
| AGCTACTTCAGCTTCAGATT+TGG | 0.330327 | 5.1:+25303534 | MS.gene44386:CDS |
| CTGCTTGTACAATATCATTA+TGG | 0.334475 | 5.1:-25303486 | None:intergenic |
| AGAACCCGGTTCACCTGTTC+CGG | 0.339795 | 5.1:+25301511 | MS.gene44386:CDS |
| TAGTTCTGTTAGAGGCTCTT+GGG | 0.340320 | 5.1:+25301649 | MS.gene44386:CDS |
| TCACCTGTTCCGGTTCTTAA+GGG | 0.343403 | 5.1:+25301521 | MS.gene44386:CDS |
| TACCTACATTTGACTTAAAT+GGG | 0.353155 | 5.1:-25301988 | None:intergenic |
| GAATTACGATGCTCGCTTGT+TGG | 0.355819 | 5.1:-25301302 | None:intergenic |
| TGTAAGCCTAGTTCTGTTAG+AGG | 0.362039 | 5.1:+25301641 | MS.gene44386:CDS |
| GGTACACCTGAACCTTTAAT+GGG | 0.362564 | 5.1:+25301578 | MS.gene44386:CDS |
| TTGAAACAGAAGCTGGGAAT+TGG | 0.368398 | 5.1:+25303839 | MS.gene44386:CDS |
| TTATACTTAAAGTTATGAAC+TGG | 0.369520 | 5.1:+25303953 | MS.gene44386:CDS |
| CTAGTTCTGTTAGAGGCTCT+TGG | 0.370390 | 5.1:+25301648 | MS.gene44386:CDS |
| GGCTAGGCCTCTTATTACTA+TGG | 0.370646 | 5.1:-25303993 | None:intergenic |
| AACACTCGCACCTGGAATTC+TGG | 0.372129 | 5.1:+25301244 | MS.gene44386:CDS |
| AGAGTTTCCTGATTGGTCTA+TGG | 0.379081 | 5.1:-25303623 | None:intergenic |
| CCTGGTAGACACCCTTTCAT+TGG | 0.380122 | 5.1:+25301557 | MS.gene44386:CDS |
| ACTTCTGTTGGTGTTATTGA+TGG | 0.396694 | 5.1:+25302791 | MS.gene44386:CDS |
| TTGCTTAAGCTGCAAGATAC+TGG | 0.397381 | 5.1:-25303793 | None:intergenic |
| CCAGCAAGACTCAGCTCCTT+GGG | 0.398487 | 5.1:+25302920 | MS.gene44386:CDS |
| TTAGAGGCTCTTGGGGTACT+GGG | 0.405967 | 5.1:+25301657 | MS.gene44386:CDS |
| GGAGGAGTAATGGTGGAATT+GGG | 0.406171 | 5.1:+25301792 | MS.gene44386:CDS |
| GGTAAAATGAATGATGCAAA+AGG | 0.406368 | 5.1:+25301860 | MS.gene44386:CDS |
| ACATGTTTGAGCCTGGGCCT+GGG | 0.407636 | 5.1:-25301621 | None:intergenic |
| GGAATTCATCGAGAAGGCTT+TGG | 0.409546 | 5.1:+25303867 | MS.gene44386:CDS |
| ATCGAGAAGGCTTTGGAAGC+TGG | 0.409777 | 5.1:+25303874 | MS.gene44386:CDS |
| GATCAGTGTACACCGGTTAG+AGG | 0.412154 | 5.1:+25301770 | MS.gene44386:CDS |
| ATTCGGTAGAGTTTCCTGAT+TGG | 0.416885 | 5.1:-25303630 | None:intergenic |
| AAGAACCGGAACAGGTGAAC+CGG | 0.417363 | 5.1:-25301516 | None:intergenic |
| AAAAGCCCAGACCCAGGCCC+AGG | 0.420318 | 5.1:+25301610 | MS.gene44386:CDS |
| AAAACAAAGGAAGAGTCAAA+AGG | 0.421636 | 5.1:+25303904 | MS.gene44386:CDS |
| CCACTCACAGAACACCTAAC+AGG | 0.424506 | 5.1:-25301827 | None:intergenic |
| GGAAAGATGGGACACCTGTT+AGG | 0.426168 | 5.1:+25301813 | MS.gene44386:CDS |
| GAGTCTTGCTGGTAAATTCA+TGG | 0.427479 | 5.1:-25302909 | None:intergenic |
| TGATCAAAATCCAAATTAAC+CGG | 0.427714 | 5.1:-25301752 | None:intergenic |
| ATTCTGGTAAAACTCTTAAA+CGG | 0.436822 | 5.1:+25301260 | MS.gene44386:CDS |
| AAACGAAGGTGTGTTTATAA+AGG | 0.439091 | 5.1:+25303664 | MS.gene44386:CDS |
| GTAAAATGAATGATGCAAAA+GGG | 0.449678 | 5.1:+25301861 | MS.gene44386:CDS |
| AATGGTGGAATTGGGAAAGA+TGG | 0.450831 | 5.1:+25301800 | MS.gene44386:CDS |
| GGGAAAGTCCTGGGTTGCTT+AGG | 0.450973 | 5.1:+25301882 | MS.gene44386:CDS |
| TAGGCTTACATGTTTGAGCC+TGG | 0.455518 | 5.1:-25301628 | None:intergenic |
| AAGCATCTCGTAATGCTTGA+AGG | 0.455910 | 5.1:-25303244 | None:intergenic |
| CCATTACTCCTCCCTCTAAC+CGG | 0.456201 | 5.1:-25301782 | None:intergenic |
| GAAAGGGTGTCTACCAGGTA+AGG | 0.456252 | 5.1:-25301552 | None:intergenic |
| ACCAGCAAGACTCAGCTCCT+TGG | 0.458747 | 5.1:+25302919 | MS.gene44386:CDS |
| GCACCCTTAAGAACCGGAAC+AGG | 0.461498 | 5.1:-25301524 | None:intergenic |
| AAACAAAGGAAGAGTCAAAA+GGG | 0.461629 | 5.1:+25303905 | MS.gene44386:CDS |
| CAAAATTCCATAGACCAATC+AGG | 0.466760 | 5.1:+25303616 | MS.gene44386:CDS |
| GGTTTAGCACCCTTAAGAAC+CGG | 0.469852 | 5.1:-25301530 | None:intergenic |
| CTTAAGCAACACAGTCAAGT+TGG | 0.473573 | 5.1:+25303807 | MS.gene44386:CDS |
| CTGAACCTTTAATGGGCCTA+AGG | 0.474948 | 5.1:+25301585 | MS.gene44386:CDS |
| AACAATACCATAGTAATAAG+AGG | 0.475846 | 5.1:+25303986 | MS.gene44386:CDS |
| CAAGAGCCTCTAACAGAACT+AGG | 0.476566 | 5.1:-25301647 | None:intergenic |
| TCTCAGTAATAAAATGCAGC+TGG | 0.477886 | 5.1:+25301463 | MS.gene44386:CDS |
| CCAATGAAAGGGTGTCTACC+AGG | 0.484988 | 5.1:-25301557 | None:intergenic |
| GTCATCAAGTACTAATCAAA+GGG | 0.487674 | 5.1:+25303708 | MS.gene44386:CDS |
| TAAAGTTATGAACTGGGTTG+AGG | 0.488202 | 5.1:+25303960 | MS.gene44386:CDS |
| ATGGTGGAATTGGGAAAGAT+GGG | 0.488536 | 5.1:+25301801 | MS.gene44386:CDS |
| ACTTTAAGTATAAGTGATTG+AGG | 0.490591 | 5.1:-25303943 | None:intergenic |
| GTGTTTCTGAAAGAGAGAAT+AGG | 0.491749 | 5.1:+25301954 | MS.gene44386:CDS |
| AAACAGATTGAAACAGAAGC+TGG | 0.500125 | 5.1:+25303832 | MS.gene44386:CDS |
| TTAAGCAACACAGTCAAGTT+GGG | 0.500938 | 5.1:+25303808 | MS.gene44386:CDS |
| GTAGATCGAATGCGAAGAAT+CGG | 0.506740 | 5.1:-25301408 | None:intergenic |
| TTTGACTTAAATGGGCTAGC+AGG | 0.512698 | 5.1:-25301980 | None:intergenic |
| GATGCAAAAGGGGAAAGTCC+TGG | 0.512884 | 5.1:+25301872 | MS.gene44386:CDS |
| TTAGGTGTTCTGTGAGTGGA+GGG | 0.515841 | 5.1:+25301831 | MS.gene44386:CDS |
| ACAATGGCAACACTCGCACC+TGG | 0.516172 | 5.1:+25301236 | None:intergenic |
| GGAGAAGAAAGGTTCTACCT+TGG | 0.516663 | 5.1:+25303738 | MS.gene44386:CDS |
| AGGCTTACATGTTTGAGCCT+GGG | 0.517390 | 5.1:-25301627 | None:intergenic |
| ACAAAATCATGTTGATCAGA+AGG | 0.522160 | 5.1:-25301440 | None:intergenic |
| TGTGCTGCTTTAGGATGGCT+AGG | 0.524805 | 5.1:-25304009 | None:intergenic |
| GGTTCAGGTGTACCAATGAA+AGG | 0.526111 | 5.1:-25301569 | None:intergenic |
| GCATGTCTTAACCGTGGTGG+CGG | 0.526474 | 5.1:-25302758 | None:intergenic |
| TGAACCTTTAATGGGCCTAA+GGG | 0.528581 | 5.1:+25301586 | MS.gene44386:CDS |
| CCGGTTAGAGGGAGGAGTAA+TGG | 0.528999 | 5.1:+25301782 | MS.gene44386:CDS |
| CTAAAGCAGCACAGATTGCT+CGG | 0.535752 | 5.1:+25304019 | MS.gene44386:CDS |
| AGTCATCAAGTACTAATCAA+AGG | 0.544114 | 5.1:+25303707 | MS.gene44386:CDS |
| CTTTAAGTATAAGTGATTGA+GGG | 0.548171 | 5.1:-25303942 | None:intergenic |
| AACCGTTCAAAACATGTAGC+AGG | 0.550629 | 5.1:-25303454 | None:intergenic |
| CCTGTTAGGTGTTCTGTGAG+TGG | 0.551132 | 5.1:+25301827 | MS.gene44386:CDS |
| TAAAATGAATGATGCAAAAG+GGG | 0.552990 | 5.1:+25301862 | MS.gene44386:CDS |
| ATGCAAAAGGGGAAAGTCCT+GGG | 0.556764 | 5.1:+25301873 | MS.gene44386:CDS |
| GTTCAGGTGTACCAATGAAA+GGG | 0.557702 | 5.1:-25301568 | None:intergenic |
| GATGATGATGACGGTGATGG+TGG | 0.563474 | 5.1:+25301695 | MS.gene44386:CDS |
| AACAGATTGAAACAGAAGCT+GGG | 0.564973 | 5.1:+25303833 | MS.gene44386:CDS |
| AGTCTTGCTGGTAAATTCAT+GGG | 0.565122 | 5.1:-25302908 | None:intergenic |
| ATCAGTGTACACCGGTTAGA+GGG | 0.566216 | 5.1:+25301771 | MS.gene44386:CDS |
| CAATCTGTGCTGCTTTAGGA+TGG | 0.570007 | 5.1:-25304014 | None:intergenic |
| GTTAGGTGTTCTGTGAGTGG+AGG | 0.570599 | 5.1:+25301830 | MS.gene44386:CDS |
| GAGATCGGCGGGGACGATGT+CGG | 0.571188 | 5.1:-25301339 | None:intergenic |
| CTCAGTAATAAAATGCAGCT+GGG | 0.573302 | 5.1:+25301464 | MS.gene44386:CDS |
| AAGACTCAGCTCCTTGGGAA+AGG | 0.576060 | 5.1:+25302925 | MS.gene44386:CDS |
| GTTTATGGAATTCATCGAGA+AGG | 0.578128 | 5.1:+25303861 | MS.gene44386:CDS |
| AAGAGTCTCTTCCCAAAACA+AGG | 0.582342 | 5.1:+25301368 | MS.gene44386:CDS |
| AGCATCTCGTAATGCTTGAA+GGG | 0.586284 | 5.1:-25303243 | None:intergenic |
| AGAACCGGAACAGGTGAACC+GGG | 0.590619 | 5.1:-25301515 | None:intergenic |
| CTCGCTTGTTGGTTTCACGC+CGG | 0.597156 | 5.1:-25301291 | None:intergenic |
| AGTTCTGTTAGAGGCTCTTG+GGG | 0.597629 | 5.1:+25301650 | MS.gene44386:CDS |
| CTCTTAAACGGACTAAACAC+CGG | 0.599024 | 5.1:+25301272 | MS.gene44386:CDS |
| TATACTTAAAGTTATGAACT+GGG | 0.600506 | 5.1:+25303954 | MS.gene44386:CDS |
| TTGCTGGTAAATTCATGGGT+AGG | 0.606986 | 5.1:-25302904 | None:intergenic |
| AAGAAGAATGATGATGATGA+CGG | 0.629589 | 5.1:+25301686 | MS.gene44386:CDS |
| AAGGGTGCTAAACCCTTACC+TGG | 0.630345 | 5.1:+25301539 | MS.gene44386:CDS |
| GCAAAATAGCAGGAAAAGAG+AGG | 0.637242 | 5.1:+25302728 | MS.gene44386:intron |
| AGACTGAGATTTCTGTTGAG+AGG | 0.642630 | 5.1:-25302843 | None:intergenic |
| AAAGGGTGTCTACCAGGTAA+GGG | 0.643233 | 5.1:-25301551 | None:intergenic |
| GAGGCTCTTGGGGTACTGGG+AGG | 0.653731 | 5.1:+25301660 | MS.gene44386:CDS |
| AACAAAGGAAGAGTCAAAAG+GGG | 0.656903 | 5.1:+25303906 | MS.gene44386:CDS |
| GTTAGAGGGAGGAGTAATGG+TGG | 0.665104 | 5.1:+25301785 | MS.gene44386:CDS |
| AATGATGATGATGACGGTGA+TGG | 0.667096 | 5.1:+25301692 | MS.gene44386:CDS |
| GCAAGAGTGACGACTTCTGT+TGG | 0.673208 | 5.1:+25302779 | MS.gene44386:CDS |
| CTTGCATGTCTTAACCGTGG+TGG | 0.675866 | 5.1:-25302761 | None:intergenic |
| AGTGTACACCGGTTAGAGGG+AGG | 0.675946 | 5.1:+25301774 | MS.gene44386:CDS |
| AATCAAATGTGTCAAAACGA+AGG | 0.676051 | 5.1:+25303650 | MS.gene44386:CDS |
| AAATAGCAGGAAAAGAGAGG+TGG | 0.685301 | 5.1:+25302731 | MS.gene44386:intron |
| TATGTTGATAGATTAGAACC+CGG | 0.693093 | 5.1:+25301497 | MS.gene44386:CDS |
| GGATCGAACTACTGTCTCAG+TGG | 0.695217 | 5.1:-25303270 | None:intergenic |
| ACTCTTGCATGTCTTAACCG+TGG | 0.707486 | 5.1:-25302764 | None:intergenic |
| ATAACCTCGTGTAAAACATG+CGG | 0.722750 | 5.1:-25303592 | None:intergenic |
| GAGGTGGTACTCCGCCACCA+CGG | 0.740756 | 5.1:+25302747 | MS.gene44386:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGGATTTAAATAAAATTC+AGG | - | chr5.1:25303049-25303068 | None:intergenic | 15.0% |
| !! | AAGGATTTAAATAAAATTCA+GGG | - | chr5.1:25303048-25303067 | None:intergenic | 15.0% |
| !!! | ATTTTTGAACTTTTTCTTTT+AGG | + | chr5.1:25303392-25303411 | MS.gene44386:intron | 15.0% |
| !! | AATAAGGAATACATACTTTA+GGG | - | chr5.1:25303294-25303313 | None:intergenic | 20.0% |
| !! | AATGTTTAGAAATTTAAGCT+AGG | + | chr5.1:25302065-25302084 | MS.gene44386:intron | 20.0% |
| !! | CAACTAAACAATTGTAATTT+AGG | + | chr5.1:25302468-25302487 | MS.gene44386:intron | 20.0% |
| !! | TATACTTAAAGTTATGAACT+GGG | + | chr5.1:25303954-25303973 | MS.gene44386:CDS | 20.0% |
| !! | TGTGTTTATAAAGGAAAAAT+GGG | + | chr5.1:25303673-25303692 | MS.gene44386:CDS | 20.0% |
| !! | TTATACTTAAAGTTATGAAC+TGG | + | chr5.1:25303953-25303972 | MS.gene44386:CDS | 20.0% |
| !!! | ATTCTTTCATTTTTTTTGTG+TGG | + | chr5.1:25302030-25302049 | MS.gene44386:intron | 20.0% |
| !!! | CCTTATTCAATTCTATTTTT+GGG | + | chr5.1:25303307-25303326 | MS.gene44386:intron | 20.0% |
| !!! | CTTATTCAATTCTATTTTTG+GGG | + | chr5.1:25303308-25303327 | MS.gene44386:intron | 20.0% |
| !!! | TACATTTTTGTTAAAGCTAA+AGG | + | chr5.1:25302948-25302967 | MS.gene44386:intron | 20.0% |
| !!! | TCCTTATTCAATTCTATTTT+TGG | + | chr5.1:25303306-25303325 | MS.gene44386:intron | 20.0% |
| ! | AACAATACCATAGTAATAAG+AGG | + | chr5.1:25303986-25304005 | MS.gene44386:CDS | 25.0% |
| ! | ACTTTAAGTATAAGTGATTG+AGG | - | chr5.1:25303946-25303965 | None:intergenic | 25.0% |
| ! | ATTCTGGTAAAACTCTTAAA+CGG | + | chr5.1:25301260-25301279 | MS.gene44386:CDS | 25.0% |
| ! | CCCAAAAATAGAATTGAATA+AGG | - | chr5.1:25303310-25303329 | None:intergenic | 25.0% |
| ! | CTTTAAGTATAAGTGATTGA+GGG | - | chr5.1:25303945-25303964 | None:intergenic | 25.0% |
| ! | GAATAAGGAATACATACTTT+AGG | - | chr5.1:25303295-25303314 | None:intergenic | 25.0% |
| ! | GTAAAATGAATGATGCAAAA+GGG | + | chr5.1:25301861-25301880 | MS.gene44386:CDS | 25.0% |
| ! | GTGTGTTTATAAAGGAAAAA+TGG | + | chr5.1:25303672-25303691 | MS.gene44386:CDS | 25.0% |
| ! | TAAAATGAATGATGCAAAAG+GGG | + | chr5.1:25301862-25301881 | MS.gene44386:CDS | 25.0% |
| ! | TGATCAAAATCCAAATTAAC+CGG | - | chr5.1:25301755-25301774 | None:intergenic | 25.0% |
| !! | GATTTTTAAACCGGTTAATT+TGG | + | chr5.1:25301742-25301761 | MS.gene44386:CDS | 25.0% |
| !! | TACCTACATTTGACTTAAAT+GGG | - | chr5.1:25301991-25302010 | None:intergenic | 25.0% |
| !! | TTAACCGGTTTAAAAATCAT+CGG | - | chr5.1:25301740-25301759 | None:intergenic | 25.0% |
| !! | TTCTCATCATTTTCAACAAT+TGG | - | chr5.1:25303766-25303785 | None:intergenic | 25.0% |
| !!! | AGTGAAATTGTGATTAGTTT+GGG | + | chr5.1:25302339-25302358 | MS.gene44386:intron | 25.0% |
| AAAACAAAGGAAGAGTCAAA+AGG | + | chr5.1:25303904-25303923 | MS.gene44386:CDS | 30.0% | |
| AAACAAAGGAAGAGTCAAAA+GGG | + | chr5.1:25303905-25303924 | MS.gene44386:CDS | 30.0% | |
| AATCAAATGTGTCAAAACGA+AGG | + | chr5.1:25303650-25303669 | MS.gene44386:CDS | 30.0% | |
| ACAAAATCATGTTGATCAGA+AGG | - | chr5.1:25301443-25301462 | None:intergenic | 30.0% | |
| ACTATTTCAGTCCTAAACTT+TGG | + | chr5.1:25302992-25303011 | MS.gene44386:intron | 30.0% | |
| AGTCATCAAGTACTAATCAA+AGG | + | chr5.1:25303707-25303726 | MS.gene44386:CDS | 30.0% | |
| ATATTGCAATCCTAGATACT+AGG | - | chr5.1:25302639-25302658 | None:intergenic | 30.0% | |
| CCTTAAAATGAGTGTAATTG+AGG | + | chr5.1:25302124-25302143 | MS.gene44386:intron | 30.0% | |
| CTATTTCAGTCCTAAACTTT+GGG | + | chr5.1:25302993-25303012 | MS.gene44386:intron | 30.0% | |
| CTGCTTGTACAATATCATTA+TGG | - | chr5.1:25303489-25303508 | None:intergenic | 30.0% | |
| GATTATTGTAGACACATCAA+AGG | - | chr5.1:25303067-25303086 | None:intergenic | 30.0% | |
| GGTAAAATGAATGATGCAAA+AGG | + | chr5.1:25301860-25301879 | MS.gene44386:CDS | 30.0% | |
| GTCATCAAGTACTAATCAAA+GGG | + | chr5.1:25303708-25303727 | MS.gene44386:CDS | 30.0% | |
| GTTATGTTTATGCGAAATTG+AGG | + | chr5.1:25302188-25302207 | MS.gene44386:intron | 30.0% | |
| TATGTAAAGCTAACATATGC+CGG | - | chr5.1:25302236-25302255 | None:intergenic | 30.0% | |
| TGATTATTGTGCAAAATAGC+AGG | + | chr5.1:25302718-25302737 | MS.gene44386:intron | 30.0% | |
| ! | AAACGAAGGTGTGTTTATAA+AGG | + | chr5.1:25303664-25303683 | MS.gene44386:CDS | 30.0% |
| ! | AAGAAGAATGATGATGATGA+CGG | + | chr5.1:25301686-25301705 | MS.gene44386:CDS | 30.0% |
| ! | CCTCAATTACACTCATTTTA+AGG | - | chr5.1:25302127-25302146 | None:intergenic | 30.0% |
| ! | GAGTGAAATTGTGATTAGTT+TGG | + | chr5.1:25302338-25302357 | MS.gene44386:intron | 30.0% |
| ! | GTACCTACATTTGACTTAAA+TGG | - | chr5.1:25301992-25302011 | None:intergenic | 30.0% |
| ! | TACTAATCAAAGGGAGATTT+TGG | + | chr5.1:25303717-25303736 | MS.gene44386:CDS | 30.0% |
| ! | TATGTTGATAGATTAGAACC+CGG | + | chr5.1:25301497-25301516 | MS.gene44386:CDS | 30.0% |
| ! | TGTATTTTATGTTGCATGAC+AGG | + | chr5.1:25303095-25303114 | MS.gene44386:intron | 30.0% |
| !! | AGCTGGTTTGAAAAAAACAA+AGG | + | chr5.1:25303891-25303910 | MS.gene44386:CDS | 30.0% |
| !! | ATTTTCAACAATTGGTTCCA+AGG | - | chr5.1:25303758-25303777 | None:intergenic | 30.0% |
| !! | TCGTTTTGACACATTTGATT+CGG | - | chr5.1:25303650-25303669 | None:intergenic | 30.0% |
| !!! | TGATGTAAAAGCCTTGTTTT+GGG | - | chr5.1:25301382-25301401 | None:intergenic | 30.0% |
| !!! | TTGATGTAAAAGCCTTGTTT+TGG | - | chr5.1:25301383-25301402 | None:intergenic | 30.0% |
| AAACAGATTGAAACAGAAGC+TGG | + | chr5.1:25303832-25303851 | MS.gene44386:CDS | 35.0% | |
| AACAAAGGAAGAGTCAAAAG+GGG | + | chr5.1:25303906-25303925 | MS.gene44386:CDS | 35.0% | |
| AACAGATTGAAACAGAAGCT+GGG | + | chr5.1:25303833-25303852 | MS.gene44386:CDS | 35.0% | |
| AACTGCAATTGATGTCTTTC+AGG | + | chr5.1:25302371-25302390 | MS.gene44386:intron | 35.0% | |
| AAGGCTGCAAAAACATCAAA+AGG | - | chr5.1:25302108-25302127 | None:intergenic | 35.0% | |
| ACAAAAATGTACCTTTCCCA+AGG | - | chr5.1:25302939-25302958 | None:intergenic | 35.0% | |
| AGCCCATTTAAGTCAAATGT+AGG | + | chr5.1:25301986-25302005 | MS.gene44386:intron | 35.0% | |
| AGGCTGCAAAAACATCAAAA+GGG | - | chr5.1:25302107-25302126 | None:intergenic | 35.0% | |
| AGTCTTGCTGGTAAATTCAT+GGG | - | chr5.1:25302911-25302930 | None:intergenic | 35.0% | |
| ATAACCTCGTGTAAAACATG+CGG | - | chr5.1:25303595-25303614 | None:intergenic | 35.0% | |
| CAAAATTCCATAGACCAATC+AGG | + | chr5.1:25303616-25303635 | MS.gene44386:CDS | 35.0% | |
| CCTGAAAATGAGTGTAATTG+AGG | + | chr5.1:25302394-25302413 | MS.gene44386:intron | 35.0% | |
| CTCAGTAATAAAATGCAGCT+GGG | + | chr5.1:25301464-25301483 | MS.gene44386:CDS | 35.0% | |
| GTTTATGGAATTCATCGAGA+AGG | + | chr5.1:25303861-25303880 | MS.gene44386:CDS | 35.0% | |
| TAAAGTTATGAACTGGGTTG+AGG | + | chr5.1:25303960-25303979 | MS.gene44386:CDS | 35.0% | |
| TCTCAGTAATAAAATGCAGC+TGG | + | chr5.1:25301463-25301482 | MS.gene44386:CDS | 35.0% | |
| TGATATCACAGCCATATTTG+CGG | + | chr5.1:25303021-25303040 | MS.gene44386:intron | 35.0% | |
| TGATGGAGTTACTCAAAAAG+AGG | + | chr5.1:25302808-25302827 | MS.gene44386:CDS | 35.0% | |
| TTAAAAATCATCGGCGAAGA+CGG | - | chr5.1:25301731-25301750 | None:intergenic | 35.0% | |
| TTAAGCAACACAGTCAAGTT+GGG | + | chr5.1:25303808-25303827 | MS.gene44386:CDS | 35.0% | |
| ! | AAGAGTTTTACCAGAATTCC+AGG | - | chr5.1:25301257-25301276 | None:intergenic | 35.0% |
| ! | CCTCAATTACACTCATTTTC+AGG | - | chr5.1:25302397-25302416 | None:intergenic | 35.0% |
| ! | CTTAGGAAAAGTTGTGCTTT+TGG | + | chr5.1:25301899-25301918 | MS.gene44386:CDS | 35.0% |
| ! | GTGTTTCTGAAAGAGAGAAT+AGG | + | chr5.1:25301954-25301973 | MS.gene44386:CDS | 35.0% |
| ! | TATCTGTGTTGGTGTTTCAT+AGG | + | chr5.1:25302295-25302314 | MS.gene44386:intron | 35.0% |
| ! | TTCGCCGATGATTTTTAAAC+CGG | + | chr5.1:25301733-25301752 | MS.gene44386:CDS | 35.0% |
| !! | ACTTCTGTTGGTGTTATTGA+TGG | + | chr5.1:25302791-25302810 | MS.gene44386:CDS | 35.0% |
| !! | TACATGTTTTGAACGGTTTC+TGG | + | chr5.1:25303459-25303478 | MS.gene44386:CDS | 35.0% |
| !!! | GTGCTTTTGGTTCTTCTAAT+GGG | + | chr5.1:25301912-25301931 | MS.gene44386:CDS | 35.0% |
| !!! | TGTGCTTTTGGTTCTTCTAA+TGG | + | chr5.1:25301911-25301930 | MS.gene44386:CDS | 35.0% |
| AAATAGCAGGAAAAGAGAGG+TGG | + | chr5.1:25302731-25302750 | MS.gene44386:intron | 40.0% | |
| AAATTCAGGGACCGCAAATA+TGG | - | chr5.1:25303035-25303054 | None:intergenic | 40.0% | |
| AACCGTTCAAAACATGTAGC+AGG | - | chr5.1:25303457-25303476 | None:intergenic | 40.0% | |
| AAGAGTCTCTTCCCAAAACA+AGG | + | chr5.1:25301368-25301387 | MS.gene44386:CDS | 40.0% | |
| AAGCATCTCGTAATGCTTGA+AGG | - | chr5.1:25303247-25303266 | None:intergenic | 40.0% | |
| AGACTGAGATTTCTGTTGAG+AGG | - | chr5.1:25302846-25302865 | None:intergenic | 40.0% | |
| AGCATCTCGTAATGCTTGAA+GGG | - | chr5.1:25303246-25303265 | None:intergenic | 40.0% | |
| AGCTACTTCAGCTTCAGATT+TGG | + | chr5.1:25303534-25303553 | MS.gene44386:CDS | 40.0% | |
| ATGACAGACAGCCATATTTG+CGG | + | chr5.1:25303110-25303129 | MS.gene44386:intron | 40.0% | |
| ATTCGGTAGAGTTTCCTGAT+TGG | - | chr5.1:25303633-25303652 | None:intergenic | 40.0% | |
| CTTAAGCAACACAGTCAAGT+TGG | + | chr5.1:25303807-25303826 | MS.gene44386:CDS | 40.0% | |
| GAGTCTTGCTGGTAAATTCA+TGG | - | chr5.1:25302912-25302931 | None:intergenic | 40.0% | |
| GCAAAATAGCAGGAAAAGAG+AGG | + | chr5.1:25302728-25302747 | MS.gene44386:intron | 40.0% | |
| GGTACACCTGAACCTTTAAT+GGG | + | chr5.1:25301578-25301597 | MS.gene44386:CDS | 40.0% | |
| GTAGATCGAATGCGAAGAAT+CGG | - | chr5.1:25301411-25301430 | None:intergenic | 40.0% | |
| GTGTTTCATAGGAATCAGCT+GGG | + | chr5.1:25302306-25302325 | MS.gene44386:intron | 40.0% | |
| GTTCAGGTGTACCAATGAAA+GGG | - | chr5.1:25301571-25301590 | None:intergenic | 40.0% | |
| TATCACGCTACCCAAAGTTT+AGG | - | chr5.1:25303006-25303025 | None:intergenic | 40.0% | |
| TGCAATTCTGCCTAGTATCT+AGG | + | chr5.1:25302626-25302645 | MS.gene44386:intron | 40.0% | |
| TGGTACACCTGAACCTTTAA+TGG | + | chr5.1:25301577-25301596 | MS.gene44386:CDS | 40.0% | |
| TGTAGTGTACGTATCTGTGT+TGG | + | chr5.1:25302284-25302303 | MS.gene44386:intron | 40.0% | |
| TTGAAACAGAAGCTGGGAAT+TGG | + | chr5.1:25303839-25303858 | MS.gene44386:CDS | 40.0% | |
| TTGCTGGTAAATTCATGGGT+AGG | - | chr5.1:25302907-25302926 | None:intergenic | 40.0% | |
| TTGCTTAAGCTGCAAGATAC+TGG | - | chr5.1:25303796-25303815 | None:intergenic | 40.0% | |
| ! | AATGGTGGAATTGGGAAAGA+TGG | + | chr5.1:25301800-25301819 | MS.gene44386:CDS | 40.0% |
| ! | AGAAGCTGGGAATTGGTTTA+TGG | + | chr5.1:25303846-25303865 | MS.gene44386:CDS | 40.0% |
| ! | ATGGTGGAATTGGGAAAGAT+GGG | + | chr5.1:25301801-25301820 | MS.gene44386:CDS | 40.0% |
| ! | TAGTTCTGTTAGAGGCTCTT+GGG | + | chr5.1:25301649-25301668 | MS.gene44386:CDS | 40.0% |
| ! | TGAACCTTTAATGGGCCTAA+GGG | + | chr5.1:25301586-25301605 | MS.gene44386:CDS | 40.0% |
| ! | TTTTCCCTTAGGCCCATTAA+AGG | - | chr5.1:25301593-25301612 | None:intergenic | 40.0% |
| !! | AATGATGATGATGACGGTGA+TGG | + | chr5.1:25301692-25301711 | MS.gene44386:CDS | 40.0% |
| !! | AGAGTTTCCTGATTGGTCTA+TGG | - | chr5.1:25303626-25303645 | None:intergenic | 40.0% |
| !! | AGGGAGATTTTGGAGAAGAA+AGG | + | chr5.1:25303727-25303746 | MS.gene44386:CDS | 40.0% |
| !! | CACCTGCTACATGTTTTGAA+CGG | + | chr5.1:25303452-25303471 | MS.gene44386:CDS | 40.0% |
| !! | CTCTTAAACGGACTAAACAC+CGG | + | chr5.1:25301272-25301291 | MS.gene44386:CDS | 40.0% |
| !! | GGATTTTGATCAGTGTACAC+CGG | + | chr5.1:25301763-25301782 | MS.gene44386:CDS | 40.0% |
| !! | TGTAAGCCTAGTTCTGTTAG+AGG | + | chr5.1:25301641-25301660 | MS.gene44386:CDS | 40.0% |
| !! | TTTGACTTAAATGGGCTAGC+AGG | - | chr5.1:25301983-25302002 | None:intergenic | 40.0% |
| ACTCTTGCATGTCTTAACCG+TGG | - | chr5.1:25302767-25302786 | None:intergenic | 45.0% | |
| AGGCTTACATGTTTGAGCCT+GGG | - | chr5.1:25301630-25301649 | None:intergenic | 45.0% | |
| AGTTCTGTTAGAGGCTCTTG+GGG | + | chr5.1:25301650-25301669 | MS.gene44386:CDS | 45.0% | |
| ATGCAAAAGGGGAAAGTCCT+GGG | + | chr5.1:25301873-25301892 | MS.gene44386:CDS | 45.0% | |
| CAAGAGCCTCTAACAGAACT+AGG | - | chr5.1:25301650-25301669 | None:intergenic | 45.0% | |
| CTAAAGCAGCACAGATTGCT+CGG | + | chr5.1:25304019-25304038 | MS.gene44386:CDS | 45.0% | |
| CTTAGGCCCATTAAAGGTTC+AGG | - | chr5.1:25301587-25301606 | None:intergenic | 45.0% | |
| GAATTACGATGCTCGCTTGT+TGG | - | chr5.1:25301305-25301324 | None:intergenic | 45.0% | |
| GGAATTCATCGAGAAGGCTT+TGG | + | chr5.1:25303867-25303886 | MS.gene44386:CDS | 45.0% | |
| GGAGAAGAAAGGTTCTACCT+TGG | + | chr5.1:25303738-25303757 | MS.gene44386:CDS | 45.0% | |
| GGCTAGGCCTCTTATTACTA+TGG | - | chr5.1:25303996-25304015 | None:intergenic | 45.0% | |
| GGTGTTTCATAGGAATCAGC+TGG | + | chr5.1:25302305-25302324 | MS.gene44386:intron | 45.0% | |
| GGTTCAGGTGTACCAATGAA+AGG | - | chr5.1:25301572-25301591 | None:intergenic | 45.0% | |
| GGTTTAGCACCCTTAAGAAC+CGG | - | chr5.1:25301533-25301552 | None:intergenic | 45.0% | |
| TAGGCTTACATGTTTGAGCC+TGG | - | chr5.1:25301631-25301650 | None:intergenic | 45.0% | |
| TCACCTGTTCCGGTTCTTAA+GGG | + | chr5.1:25301521-25301540 | MS.gene44386:CDS | 45.0% | |
| TTAGGTGTTCTGTGAGTGGA+GGG | + | chr5.1:25301831-25301850 | MS.gene44386:CDS | 45.0% | |
| TTCACCTGTTCCGGTTCTTA+AGG | + | chr5.1:25301520-25301539 | MS.gene44386:CDS | 45.0% | |
| ! | ACAACCGCATGTTTTACACG+AGG | + | chr5.1:25303588-25303607 | MS.gene44386:CDS | 45.0% |
| ! | ATCAGTGTACACCGGTTAGA+GGG | + | chr5.1:25301771-25301790 | MS.gene44386:CDS | 45.0% |
| ! | CAACTTTTCCTAAGCAACCC+AGG | - | chr5.1:25301893-25301912 | None:intergenic | 45.0% |
| ! | CTGAACCTTTAATGGGCCTA+AGG | + | chr5.1:25301585-25301604 | MS.gene44386:CDS | 45.0% |
| ! | GAGACTCTTTTCGTCGAGAT+CGG | - | chr5.1:25301357-25301376 | None:intergenic | 45.0% |
| ! | GGAGGAGTAATGGTGGAATT+GGG | + | chr5.1:25301792-25301811 | MS.gene44386:CDS | 45.0% |
| !! | AAAGGGTGTCTACCAGGTAA+GGG | - | chr5.1:25301554-25301573 | None:intergenic | 45.0% |
| !! | CAATCTGTGCTGCTTTAGGA+TGG | - | chr5.1:25304017-25304036 | None:intergenic | 45.0% |
| !! | CTAGTTCTGTTAGAGGCTCT+TGG | + | chr5.1:25301648-25301667 | MS.gene44386:CDS | 45.0% |
| AACACTCGCACCTGGAATTC+TGG | + | chr5.1:25301244-25301263 | MS.gene44386:CDS | 50.0% | |
| AAGAACCGGAACAGGTGAAC+CGG | - | chr5.1:25301519-25301538 | None:intergenic | 50.0% | |
| AAGACTCAGCTCCTTGGGAA+AGG | + | chr5.1:25302925-25302944 | MS.gene44386:CDS | 50.0% | |
| AGGTTCTATCAGCCTCTCTG+TGG | + | chr5.1:25302208-25302227 | MS.gene44386:intron | 50.0% | |
| CCACTCACAGAACACCTAAC+AGG | - | chr5.1:25301830-25301849 | None:intergenic | 50.0% | |
| CCATTACTCCTCCCTCTAAC+CGG | - | chr5.1:25301785-25301804 | None:intergenic | 50.0% | |
| CCTGGTAGACACCCTTTCAT+TGG | + | chr5.1:25301557-25301576 | MS.gene44386:CDS | 50.0% | |
| CCTGTTAGGTGTTCTGTGAG+TGG | + | chr5.1:25301827-25301846 | MS.gene44386:CDS | 50.0% | |
| CTTGCATGTCTTAACCGTGG+TGG | - | chr5.1:25302764-25302783 | None:intergenic | 50.0% | |
| GATGCAAAAGGGGAAAGTCC+TGG | + | chr5.1:25301872-25301891 | MS.gene44386:CDS | 50.0% | |
| GCAAGAGTGACGACTTCTGT+TGG | + | chr5.1:25302779-25302798 | MS.gene44386:CDS | 50.0% | |
| GGAAAGATGGGACACCTGTT+AGG | + | chr5.1:25301813-25301832 | MS.gene44386:CDS | 50.0% | |
| GGATCGAACTACTGTCTCAG+TGG | - | chr5.1:25303273-25303292 | None:intergenic | 50.0% | |
| GTTAGAGGGAGGAGTAATGG+TGG | + | chr5.1:25301785-25301804 | MS.gene44386:CDS | 50.0% | |
| GTTAGGTGTTCTGTGAGTGG+AGG | + | chr5.1:25301830-25301849 | MS.gene44386:CDS | 50.0% | |
| ! | ACTCTTTTCGTCGAGATCGG+CGG | - | chr5.1:25301354-25301373 | None:intergenic | 50.0% |
| ! | GATCAGTGTACACCGGTTAG+AGG | + | chr5.1:25301770-25301789 | MS.gene44386:CDS | 50.0% |
| ! | GGGAGGAGTAATGGTGGAAT+TGG | + | chr5.1:25301791-25301810 | MS.gene44386:CDS | 50.0% |
| ! | TCTGTGAGTGGAGGGCTTTT+TGG | + | chr5.1:25301839-25301858 | MS.gene44386:CDS | 50.0% |
| ! | TTAGAGGCTCTTGGGGTACT+GGG | + | chr5.1:25301657-25301676 | MS.gene44386:CDS | 50.0% |
| !! | AAGGGTGCTAAACCCTTACC+TGG | + | chr5.1:25301539-25301558 | MS.gene44386:CDS | 50.0% |
| !! | ATCGAGAAGGCTTTGGAAGC+TGG | + | chr5.1:25303874-25303893 | MS.gene44386:CDS | 50.0% |
| !! | CCAATGAAAGGGTGTCTACC+AGG | - | chr5.1:25301560-25301579 | None:intergenic | 50.0% |
| !! | CGAGCAATCTGTGCTGCTTT+AGG | - | chr5.1:25304021-25304040 | None:intergenic | 50.0% |
| !! | GAAAGGGTGTCTACCAGGTA+AGG | - | chr5.1:25301555-25301574 | None:intergenic | 50.0% |
| !! | GATGATGATGACGGTGATGG+TGG | + | chr5.1:25301695-25301714 | MS.gene44386:CDS | 50.0% |
| !! | TGTGCTGCTTTAGGATGGCT+AGG | - | chr5.1:25304012-25304031 | None:intergenic | 50.0% |
| AAGGGAAAAAGCCCAGACCC+AGG | + | chr5.1:25301604-25301623 | MS.gene44386:CDS | 55.0% | |
| ACATGTTTGAGCCTGGGCCT+GGG | - | chr5.1:25301624-25301643 | None:intergenic | 55.0% | |
| ACCAGCAAGACTCAGCTCCT+TGG | + | chr5.1:25302919-25302938 | MS.gene44386:CDS | 55.0% | |
| AGAACCCGGTTCACCTGTTC+CGG | + | chr5.1:25301511-25301530 | MS.gene44386:CDS | 55.0% | |
| AGAACCGGAACAGGTGAACC+GGG | - | chr5.1:25301518-25301537 | None:intergenic | 55.0% | |
| CCAGCAAGACTCAGCTCCTT+GGG | + | chr5.1:25302920-25302939 | MS.gene44386:CDS | 55.0% | |
| CCGGTTAGAGGGAGGAGTAA+TGG | + | chr5.1:25301782-25301801 | MS.gene44386:CDS | 55.0% | |
| GCACCCTTAAGAACCGGAAC+AGG | - | chr5.1:25301527-25301546 | None:intergenic | 55.0% | |
| GCATGTCTTAACCGTGGTGG+CGG | - | chr5.1:25302761-25302780 | None:intergenic | 55.0% | |
| GGGAAAGTCCTGGGTTGCTT+AGG | + | chr5.1:25301882-25301901 | MS.gene44386:CDS | 55.0% | |
| GTTAGAGGCTCTTGGGGTAC+TGG | + | chr5.1:25301656-25301675 | MS.gene44386:CDS | 55.0% | |
| TACATGTTTGAGCCTGGGCC+TGG | - | chr5.1:25301625-25301644 | None:intergenic | 55.0% | |
| TATCAGCCTCTCTGTGGCAC+CGG | + | chr5.1:25302214-25302233 | MS.gene44386:intron | 55.0% | |
| ! | AGTGTACACCGGTTAGAGGG+AGG | + | chr5.1:25301774-25301793 | MS.gene44386:CDS | 55.0% |
| ! | CTCTTTTCGTCGAGATCGGC+GGG | - | chr5.1:25301353-25301372 | None:intergenic | 55.0% |
| ! | TCTTTTCGTCGAGATCGGCG+GGG | - | chr5.1:25301352-25301371 | None:intergenic | 55.0% |
| !! | CTCGCTTGTTGGTTTCACGC+CGG | - | chr5.1:25301294-25301313 | None:intergenic | 55.0% |
| !! | GGGTCTGGGCTTTTTCCCTT+AGG | - | chr5.1:25301604-25301623 | None:intergenic | 55.0% |
| CCCAAGGAGCTGAGTCTTGC+TGG | - | chr5.1:25302923-25302942 | None:intergenic | 60.0% | |
| !! | CATATGCCGGTGCCACAGAG+AGG | - | chr5.1:25302223-25302242 | None:intergenic | 60.0% |
| AAAAGCCCAGACCCAGGCCC+AGG | + | chr5.1:25301610-25301629 | MS.gene44386:CDS | 65.0% | |
| GAGATCGGCGGGGACGATGT+CGG | - | chr5.1:25301342-25301361 | None:intergenic | 65.0% | |
| GAGGTGGTACTCCGCCACCA+CGG | + | chr5.1:25302747-25302766 | MS.gene44386:CDS | 65.0% | |
| TTGAGCCTGGGCCTGGGTCT+GGG | - | chr5.1:25301618-25301637 | None:intergenic | 65.0% | |
| TTTGAGCCTGGGCCTGGGTC+TGG | - | chr5.1:25301619-25301638 | None:intergenic | 65.0% | |
| !! | GAGGCTCTTGGGGTACTGGG+AGG | + | chr5.1:25301660-25301679 | MS.gene44386:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 25301239 | 25304071 | 25301239 | ID=MS.gene44386 |
| chr5.1 | mRNA | 25301239 | 25304071 | 25301239 | ID=MS.gene44386.t1;Parent=MS.gene44386 |
| chr5.1 | exon | 25301239 | 25302003 | 25301239 | ID=MS.gene44386.t1.exon1;Parent=MS.gene44386.t1 |
| chr5.1 | CDS | 25301239 | 25302003 | 25301239 | ID=cds.MS.gene44386.t1;Parent=MS.gene44386.t1 |
| chr5.1 | exon | 25302740 | 25302946 | 25302740 | ID=MS.gene44386.t1.exon2;Parent=MS.gene44386.t1 |
| chr5.1 | CDS | 25302740 | 25302946 | 25302740 | ID=cds.MS.gene44386.t1;Parent=MS.gene44386.t1 |
| chr5.1 | exon | 25303206 | 25303297 | 25303206 | ID=MS.gene44386.t1.exon3;Parent=MS.gene44386.t1 |
| chr5.1 | CDS | 25303206 | 25303297 | 25303206 | ID=cds.MS.gene44386.t1;Parent=MS.gene44386.t1 |
| chr5.1 | exon | 25303414 | 25304071 | 25303414 | ID=MS.gene44386.t1.exon4;Parent=MS.gene44386.t1 |
| chr5.1 | CDS | 25303414 | 25304071 | 25303414 | ID=cds.MS.gene44386.t1;Parent=MS.gene44386.t1 |
| Gene Sequence |
| Protein sequence |
