Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45709.t1 | XP_013456378.1 | 98.8 | 434 | 5 | 0 | 1 | 434 | 1 | 434 | 9.30E-241 | 842.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45709.t1 | Q944K2 | 72.6 | 434 | 119 | 0 | 1 | 434 | 4 | 437 | 1.5e-186 | 653.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45709.t1 | A0A072UL06 | 98.8 | 434 | 5 | 0 | 1 | 434 | 1 | 434 | 6.7e-241 | 842.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene45709 | MS.gene026843 | PPI |
| MS.gene05210 | MS.gene45709 | PPI |
| MS.gene057988 | MS.gene45709 | PPI |
| MS.gene013275 | MS.gene45709 | PPI |
| MS.gene37721 | MS.gene45709 | PPI |
| MS.gene40930 | MS.gene45709 | PPI |
| MS.gene039901 | MS.gene45709 | PPI |
| MS.gene57836 | MS.gene45709 | PPI |
| MS.gene039903 | MS.gene45709 | PPI |
| MS.gene049245 | MS.gene45709 | PPI |
| MS.gene001011 | MS.gene45709 | PPI |
| MS.gene060603 | MS.gene45709 | PPI |
| MS.gene45709 | MS.gene54807 | PPI |
| MS.gene005960 | MS.gene45709 | PPI |
| MS.gene50024 | MS.gene45709 | PPI |
| MS.gene060182 | MS.gene45709 | PPI |
| MS.gene057990 | MS.gene45709 | PPI |
| MS.gene50925 | MS.gene45709 | PPI |
| MS.gene06356 | MS.gene45709 | PPI |
| MS.gene63757 | MS.gene45709 | PPI |
| MS.gene50921 | MS.gene45709 | PPI |
| MS.gene34049 | MS.gene45709 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45709.t1 | MTR_4g069240 | 98.848 | 434 | 5 | 0 | 1 | 434 | 1 | 434 | 0.0 | 879 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45709.t1 | AT5G66680 | 72.581 | 434 | 119 | 0 | 1 | 434 | 4 | 437 | 0.0 | 667 |
Find 85 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGATGCTGCTGCTATTT+TGG | 0.127598 | 4.4:+38327771 | MS.gene45709:CDS |
| GTATCTCTGAAGCGCGATTT+TGG | 0.159842 | 4.4:-38327520 | None:intergenic |
| TCGTTATTTCACATCATTTA+AGG | 0.188816 | 4.4:+38330951 | MS.gene45709:CDS |
| GACTTGTCAACTTAGATTTC+GGG | 0.258598 | 4.4:-38328902 | None:intergenic |
| GGACTTGTCAACTTAGATTT+CGG | 0.288422 | 4.4:-38328903 | None:intergenic |
| TTTAAGGTTCCAGATGTCTA+TGG | 0.292890 | 4.4:+38330967 | MS.gene45709:CDS |
| CTCATTAGTTTCAGTTATAC+AGG | 0.308347 | 4.4:+38328950 | MS.gene45709:CDS |
| TATCAAGTCTGATGTGATCT+TGG | 0.337514 | 4.4:+38328514 | MS.gene45709:CDS |
| TCAATGCATCTGATTTAATC+AGG | 0.345888 | 4.4:+38327836 | MS.gene45709:CDS |
| CGAAACTCACGTTCAATTGT+TGG | 0.346124 | 4.4:-38327579 | None:intergenic |
| GTGAAGGAATTGCATAGAAT+TGG | 0.347741 | 4.4:-38327366 | None:intergenic |
| CTATAGGATCAACGATGATT+TGG | 0.367849 | 4.4:+38330620 | MS.gene45709:CDS |
| CCAGCTGCTTATCCCTACTA+TGG | 0.373088 | 4.4:+38331730 | MS.gene45709:CDS |
| GTTGAGATTTATGAGTGGTC+TGG | 0.374977 | 4.4:+38330745 | MS.gene45709:CDS |
| AAATATTAATACCAGGCTAT+TGG | 0.384299 | 4.4:-38328744 | None:intergenic |
| ATGTGCAACACCACAAAGTT+GGG | 0.388125 | 4.4:+38330577 | MS.gene45709:CDS |
| GAGAGAGTGGGAAGATTTGA+TGG | 0.392640 | 4.4:-38327439 | None:intergenic |
| ATCATCGTTGATCCTATAGA+TGG | 0.403251 | 4.4:-38330616 | None:intergenic |
| GAGATTTGAAGTAGAGAGAG+TGG | 0.412935 | 4.4:-38327452 | None:intergenic |
| TGAAAATGCTGCTCCATAGT+AGG | 0.419345 | 4.4:-38331743 | None:intergenic |
| TCTCAACTGAAGTTAGCAAA+TGG | 0.420784 | 4.4:+38330400 | MS.gene45709:CDS |
| CTAACGAACCATCCATCTAT+AGG | 0.422810 | 4.4:+38330604 | MS.gene45709:CDS |
| GCGTCGATCTGAAGGTTTAT+CGG | 0.423696 | 4.4:-38327391 | None:intergenic |
| CGTTAGTTTCCCCAACTTTG+TGG | 0.423856 | 4.4:-38330587 | None:intergenic |
| GATAAAGTCTTCAAGACATA+GGG | 0.433134 | 4.4:-38330826 | None:intergenic |
| ATCAAGTCTGATGTGATCTT+GGG | 0.446862 | 4.4:+38328515 | MS.gene45709:CDS |
| TGTCATACTCCACTTTGAAC+TGG | 0.448661 | 4.4:-38330996 | None:intergenic |
| CTCAACTGAAGTTAGCAAAT+GGG | 0.450030 | 4.4:+38330401 | MS.gene45709:CDS |
| AATTCAGGTGTGCAGAAAGC+TGG | 0.454482 | 4.4:+38329790 | MS.gene45709:CDS |
| TAACACTTTACTCACTTGGT+TGG | 0.454859 | 4.4:-38329817 | None:intergenic |
| TTAAGGTTCCAGATGTCTAT+GGG | 0.462133 | 4.4:+38330968 | MS.gene45709:CDS |
| AAGCTTATCTTTAGCAAAGC+AGG | 0.462446 | 4.4:+38331032 | MS.gene45709:CDS |
| CCATAGTAGGGATAAGCAGC+TGG | 0.473354 | 4.4:-38331730 | None:intergenic |
| TGATAAAGTCTTCAAGACAT+AGG | 0.473483 | 4.4:-38330827 | None:intergenic |
| CCAATTCCCTGGAAAAGTAC+TGG | 0.475571 | 4.4:-38328704 | None:intergenic |
| CATTGAGCATGTTCAGCAAC+CGG | 0.481143 | 4.4:+38329659 | MS.gene45709:CDS |
| TTCAAATCTCTTCAATCTCG+TGG | 0.481633 | 4.4:+38327465 | MS.gene45709:CDS |
| TGGAAAACCCCATAGACATC+TGG | 0.491488 | 4.4:-38330976 | None:intergenic |
| TTAATGAATGTCCAATTCCC+TGG | 0.492181 | 4.4:-38328715 | None:intergenic |
| ATTAAATCCTTCCAATAGCC+TGG | 0.492817 | 4.4:+38328733 | MS.gene45709:CDS |
| CCTTGAGGTGACCTCTTTCG+TGG | 0.494374 | 4.4:-38330428 | None:intergenic |
| AATGTGCAACACCACAAAGT+TGG | 0.500432 | 4.4:+38330576 | MS.gene45709:CDS |
| TTGAGATTTATGAGTGGTCT+GGG | 0.504402 | 4.4:+38330746 | MS.gene45709:CDS |
| AATGCTCGGATATTGATCTC+TGG | 0.509944 | 4.4:+38329634 | MS.gene45709:CDS |
| CGTCGATCTGAAGGTTTATC+GGG | 0.511311 | 4.4:-38327390 | None:intergenic |
| GAAAATGCTGCTCCATAGTA+GGG | 0.513175 | 4.4:-38331742 | None:intergenic |
| ACAAGTCCGCCATCACTCCT+TGG | 0.528748 | 4.4:+38328918 | MS.gene45709:CDS |
| AGATTTGAAGTAGAGAGAGT+GGG | 0.529803 | 4.4:-38327451 | None:intergenic |
| AATCAATGTATGATCCCCTT+CGG | 0.536953 | 4.4:-38328477 | None:intergenic |
| TTGAATGTGATGCAGATGGC+AGG | 0.539161 | 4.4:+38332079 | MS.gene45709:intron |
| TGAACATCATCAGCTACATA+AGG | 0.543471 | 4.4:-38330781 | None:intergenic |
| ACAAGGATGCGTCGATCTGA+AGG | 0.544725 | 4.4:-38327399 | None:intergenic |
| AACAACAGACACGACAAGTC+AGG | 0.548788 | 4.4:+38330366 | MS.gene45709:intron |
| ATGAGTGGTCTGGGACAACA+TGG | 0.550274 | 4.4:+38330755 | MS.gene45709:CDS |
| TTCCTAGGATTATGGTGCTG+TGG | 0.550417 | 4.4:+38328421 | MS.gene45709:intron |
| AGGGAAATTGCTACTGAGTG+TGG | 0.552647 | 4.4:+38327856 | MS.gene45709:CDS |
| CTAATGAGATTGAAGATCCA+AGG | 0.557979 | 4.4:-38328935 | None:intergenic |
| AAAATCGCGCTTCAGAGATA+CGG | 0.566554 | 4.4:+38327522 | MS.gene45709:CDS |
| TTGTGTCTGAAAGGACGGAC+AGG | 0.571154 | 4.4:-38331688 | None:intergenic |
| CAATGCATCTGATTTAATCA+GGG | 0.581627 | 4.4:+38327837 | MS.gene45709:CDS |
| TCGTATTCATTGTGTCTGAA+AGG | 0.583042 | 4.4:-38331697 | None:intergenic |
| ATTGAAGATCCAAGGAGTGA+TGG | 0.584225 | 4.4:-38328927 | None:intergenic |
| ATTAATACCAGGCTATTGGA+AGG | 0.589830 | 4.4:-38328740 | None:intergenic |
| ATAGAATTGGAATGAGAGTG+AGG | 0.592884 | 4.4:-38327353 | None:intergenic |
| GTCAGGCTAGAAATAATGCT+CGG | 0.596070 | 4.4:+38329620 | MS.gene45709:intron |
| TGAAGGTTTATCGGGAGTGA+AGG | 0.596643 | 4.4:-38327382 | None:intergenic |
| TATGCAGTCTCTGCTACCGA+AGG | 0.602151 | 4.4:+38328461 | MS.gene45709:CDS |
| GCTGTGGTTGTAGATCATGC+TGG | 0.605916 | 4.4:+38328437 | MS.gene45709:CDS |
| ATTCATTGTGTCTGAAAGGA+CGG | 0.607357 | 4.4:-38331693 | None:intergenic |
| ATGCAGTCTCTGCTACCGAA+GGG | 0.611865 | 4.4:+38328462 | MS.gene45709:CDS |
| TCGTTGATCCTATAGATGGA+TGG | 0.614275 | 4.4:-38330612 | None:intergenic |
| CATAGTAGGGATAAGCAGCT+GGG | 0.628651 | 4.4:-38331729 | None:intergenic |
| CGAAGTCATCGAGTAAGACA+AGG | 0.630709 | 4.4:-38327416 | None:intergenic |
| TGCAGTCTCTGCTACCGAAG+GGG | 0.638281 | 4.4:+38328463 | MS.gene45709:CDS |
| TGTCAACTTAGATTTCGGGT+TGG | 0.638592 | 4.4:-38328898 | None:intergenic |
| GAAGATCCAAGGAGTGATGG+CGG | 0.646537 | 4.4:-38328924 | None:intergenic |
| CCACGAAAGAGGTCACCTCA+AGG | 0.647535 | 4.4:+38330428 | MS.gene45709:CDS |
| GACTTTATCAAATGACAACA+AGG | 0.655876 | 4.4:+38330840 | MS.gene45709:CDS |
| AAAGTGGAGTATGACAGACT+TGG | 0.661027 | 4.4:+38331003 | MS.gene45709:CDS |
| TAAGGTTCCAGATGTCTATG+GGG | 0.661755 | 4.4:+38330969 | MS.gene45709:CDS |
| TGTGCAACACCACAAAGTTG+GGG | 0.661973 | 4.4:+38330578 | MS.gene45709:CDS |
| ATAAAGTCTTCAAGACATAG+GGG | 0.669354 | 4.4:-38330825 | None:intergenic |
| GTGTGGAGTTGACTTTGATG+AGG | 0.682322 | 4.4:+38327873 | MS.gene45709:CDS |
| ACTCTGTTGAGATTTATGAG+TGG | 0.712074 | 4.4:+38330740 | MS.gene45709:CDS |
| TGAGTGGTCTGGGACAACAT+GGG | 0.739725 | 4.4:+38330756 | MS.gene45709:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATATTCATATATTAG+AGG | - | chr4.4:38331069-38331088 | None:intergenic | 10.0% |
| !! | TAAAATTGAAATAATAAACA+AGG | - | chr4.4:38329597-38329616 | None:intergenic | 10.0% |
| !! | AAACATCAAAAGATAAAAAA+CGG | + | chr4.4:38329408-38329427 | MS.gene45709:intron | 15.0% |
| !! | ATAAAAATACATAAGTAAAG+AGG | - | chr4.4:38328390-38328409 | None:intergenic | 15.0% |
| !! | TAAAAATACATAAGTAAAGA+GGG | - | chr4.4:38328389-38328408 | None:intergenic | 15.0% |
| !! | TGTGAATTTAATCATAAATA+AGG | + | chr4.4:38329316-38329335 | MS.gene45709:intron | 15.0% |
| !!! | AGTAATTTCTGTTTTTTTTA+TGG | + | chr4.4:38330343-38330362 | MS.gene45709:intron | 15.0% |
| !!! | AGTTTTAATTAAAGAATACA+TGG | - | chr4.4:38330678-38330697 | None:intergenic | 15.0% |
| !!! | ATAGAAATATTTGTATGTTT+TGG | - | chr4.4:38329352-38329371 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCAATTATGATAC+AGG | + | chr4.4:38328201-38328220 | MS.gene45709:intron | 15.0% |
| !!! | GTGATTATAGTTTAATTTAT+TGG | + | chr4.4:38327895-38327914 | MS.gene45709:intron | 15.0% |
| !!! | TACTAAAACATCAAATATTT+TGG | - | chr4.4:38329219-38329238 | None:intergenic | 15.0% |
| !!! | TCATATAGTTTTATTTTACT+AGG | - | chr4.4:38329907-38329926 | None:intergenic | 15.0% |
| !!! | TTATTTCAATTTTAATTGTC+AGG | + | chr4.4:38329603-38329622 | MS.gene45709:intron | 15.0% |
| !!! | TTTATGTAAATGTGTTTTTT+GGG | + | chr4.4:38327722-38327741 | MS.gene45709:intron | 15.0% |
| !!! | TTTTATGTAAATGTGTTTTT+TGG | + | chr4.4:38327721-38327740 | MS.gene45709:intron | 15.0% |
| !!! | TTTTTTTCAATTATGATACA+GGG | + | chr4.4:38328202-38328221 | MS.gene45709:intron | 15.0% |
| !! | AAAACATCAAAAGACAAAAA+TGG | - | chr4.4:38329179-38329198 | None:intergenic | 20.0% |
| !! | AAACGTTAAATTCCAATATT+TGG | + | chr4.4:38331370-38331389 | MS.gene45709:intron | 20.0% |
| !! | AAACTATTAAGAAAGATCTA+GGG | + | chr4.4:38329997-38330016 | MS.gene45709:intron | 20.0% |
| !! | AATATGAAATGACGTAAAAA+AGG | + | chr4.4:38328170-38328189 | MS.gene45709:intron | 20.0% |
| !! | ATATTCATATATTAGAGGAT+CGG | - | chr4.4:38331064-38331083 | None:intergenic | 20.0% |
| !! | ATGAACAATGAGAATAAAAT+TGG | - | chr4.4:38330473-38330492 | None:intergenic | 20.0% |
| !! | CTAATAAACAATTGAAAACA+GGG | - | chr4.4:38327621-38327640 | None:intergenic | 20.0% |
| !! | CTTTAATTAAAACTGTACTT+TGG | + | chr4.4:38330684-38330703 | MS.gene45709:intron | 20.0% |
| !! | GAAAAAAAAAGTTTAACTAC+AGG | - | chr4.4:38331399-38331418 | None:intergenic | 20.0% |
| !! | GTTTCTTTCTTATTACTATT+AGG | - | chr4.4:38331621-38331640 | None:intergenic | 20.0% |
| !! | TAATAAACAATTGAAAACAG+GGG | - | chr4.4:38327620-38327639 | None:intergenic | 20.0% |
| !! | TCTAATAAACAATTGAAAAC+AGG | - | chr4.4:38327622-38327641 | None:intergenic | 20.0% |
| !! | TTCAATTGTTTATTAGATCT+TGG | + | chr4.4:38327625-38327644 | MS.gene45709:intron | 20.0% |
| !!! | AAGGCATAATTTCTTTTTAT+GGG | - | chr4.4:38331489-38331508 | None:intergenic | 20.0% |
| !!! | AGTTAAACTTTTTTTTTCAC+TGG | + | chr4.4:38331401-38331420 | MS.gene45709:intron | 20.0% |
| !!! | AGTTACTTCTTTTTTATTAG+AGG | + | chr4.4:38330159-38330178 | MS.gene45709:intron | 20.0% |
| !!! | TCTAGGATATTTTTTTTTTG+TGG | + | chr4.4:38330294-38330313 | MS.gene45709:intron | 20.0% |
| !!! | TCTTTTATGTATTTCAATTC+AGG | + | chr4.4:38328836-38328855 | MS.gene45709:intron | 20.0% |
| !!! | TTATTCGTTTTATTTTTCCT+AGG | + | chr4.4:38328406-38328425 | MS.gene45709:intron | 20.0% |
| !!! | TTCATTAACTTGGATTTTTT+TGG | + | chr4.4:38329757-38329776 | MS.gene45709:intron | 20.0% |
| !!! | TTTGGAACATTTTTTGAAAT+GGG | + | chr4.4:38327650-38327669 | MS.gene45709:intron | 20.0% |
| !!! | TTTTATTTTTCCTAGGATTA+TGG | + | chr4.4:38328413-38328432 | MS.gene45709:intron | 20.0% |
| !!! | TTTTGGAACATTTTTTGAAA+TGG | + | chr4.4:38327649-38327668 | MS.gene45709:intron | 20.0% |
| !!! | TTTTGTTGTTTATGTGATTA+AGG | + | chr4.4:38328013-38328032 | MS.gene45709:intron | 20.0% |
| !!! | TTTTTGTCTTTTGATGTTTT+AGG | + | chr4.4:38329179-38329198 | MS.gene45709:intron | 20.0% |
| ! | AAATATTAATACCAGGCTAT+TGG | - | chr4.4:38328747-38328766 | None:intergenic | 25.0% |
| ! | AATAAGCAAAAACAACTTCA+AGG | - | chr4.4:38328657-38328676 | None:intergenic | 25.0% |
| ! | AGATCTAGAGATTAATGAAT+TGG | + | chr4.4:38329941-38329960 | MS.gene45709:intron | 25.0% |
| ! | ATAAGCAAAAACAACTTCAA+GGG | - | chr4.4:38328656-38328675 | None:intergenic | 25.0% |
| ! | ATAATTTCTTGACAGAAAAC+AGG | - | chr4.4:38329857-38329876 | None:intergenic | 25.0% |
| ! | ATCAAAAGATAAAAAACGGA+GGG | + | chr4.4:38329412-38329431 | MS.gene45709:intron | 25.0% |
| ! | ATTACTTCTAACTTATAAGC+TGG | - | chr4.4:38328336-38328355 | None:intergenic | 25.0% |
| ! | ATTATGCTTCATAAACATTC+AGG | + | chr4.4:38328586-38328605 | MS.gene45709:intron | 25.0% |
| ! | CAACATACAAATAATAGTAG+TGG | - | chr4.4:38327991-38328010 | None:intergenic | 25.0% |
| ! | CACTACTATTATTTGTATGT+TGG | + | chr4.4:38327989-38328008 | MS.gene45709:intron | 25.0% |
| ! | GAAACTATTAAGAAAGATCT+AGG | + | chr4.4:38329996-38330015 | MS.gene45709:intron | 25.0% |
| ! | GATTCAGAAATATTAATACC+AGG | - | chr4.4:38328754-38328773 | None:intergenic | 25.0% |
| ! | GTAAGAATATCTATCTCATT+GGG | + | chr4.4:38331769-38331788 | MS.gene45709:intron | 25.0% |
| ! | TAATACATTCAAAACGCATA+AGG | + | chr4.4:38331836-38331855 | MS.gene45709:intron | 25.0% |
| ! | TAGGATAGCAAAAAATACAA+TGG | - | chr4.4:38329012-38329031 | None:intergenic | 25.0% |
| ! | TCACTTTACTTTCATTAACT+TGG | + | chr4.4:38329747-38329766 | MS.gene45709:intron | 25.0% |
| ! | TGGAAACAACAAAAAGATAA+AGG | - | chr4.4:38329485-38329504 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr4.4:38330042-38330061 | MS.gene45709:intron | 25.0% |
| ! | TTATGCTTCATAAACATTCA+GGG | + | chr4.4:38328587-38328606 | MS.gene45709:intron | 25.0% |
| !! | AGAAAAAAAATGCACTTTTC+CGG | - | chr4.4:38331872-38331891 | None:intergenic | 25.0% |
| !! | CAAGGCATAATTTCTTTTTA+TGG | - | chr4.4:38331490-38331509 | None:intergenic | 25.0% |
| !! | TCAGTTATGTGTTTATGTTT+TGG | + | chr4.4:38327948-38327967 | MS.gene45709:intron | 25.0% |
| !! | TCGTTATTTCACATCATTTA+AGG | + | chr4.4:38330951-38330970 | MS.gene45709:CDS | 25.0% |
| !!! | ATTGTTCATTATTTTTCAGC+TGG | + | chr4.4:38331978-38331997 | MS.gene45709:intron | 25.0% |
| !!! | ATTTTGGATTTTGTTGATTC+TGG | + | chr4.4:38327787-38327806 | MS.gene45709:CDS | 25.0% |
| !!! | GTGTTTGACTTATATTTTCA+AGG | - | chr4.4:38331508-38331527 | None:intergenic | 25.0% |
| !!! | GTTTATTAGATCTTGGTTTT+TGG | + | chr4.4:38327632-38327651 | MS.gene45709:intron | 25.0% |
| !!! | TCGCTTTTCAATCTTTTTAA+AGG | + | chr4.4:38330714-38330733 | MS.gene45709:intron | 25.0% |
| !!! | TTCTTTTTTATTAGAGGTAC+CGG | + | chr4.4:38330165-38330184 | MS.gene45709:intron | 25.0% |
| !!! | TTGTTCATTATTTTTCAGCT+GGG | + | chr4.4:38331979-38331998 | MS.gene45709:intron | 25.0% |
| !!! | TTTTTGTTGTTTCCATTCAT+AGG | + | chr4.4:38329490-38329509 | MS.gene45709:intron | 25.0% |
| AAAAGAAAAACTAGAGTCAG+AGG | + | chr4.4:38329877-38329896 | MS.gene45709:intron | 30.0% | |
| AAAATCATGTTTGGGTAGAA+TGG | - | chr4.4:38331096-38331115 | None:intergenic | 30.0% | |
| AAACTCTTGATTGAAATTCG+TGG | + | chr4.4:38330906-38330925 | MS.gene45709:intron | 30.0% | |
| AACTCTTGATTGAAATTCGT+GGG | + | chr4.4:38330907-38330926 | MS.gene45709:intron | 30.0% | |
| AACTTACATACAAGGAAGAA+GGG | - | chr4.4:38331941-38331960 | None:intergenic | 30.0% | |
| ACATCAAAAGACAAAAATGG+AGG | - | chr4.4:38329176-38329195 | None:intergenic | 30.0% | |
| ATAAAACTAGTTGAGACCTT+TGG | + | chr4.4:38329284-38329303 | MS.gene45709:intron | 30.0% | |
| ATAAAGTCTTCAAGACATAG+GGG | - | chr4.4:38330828-38330847 | None:intergenic | 30.0% | |
| ATAACGGTAACTTACATACA+AGG | - | chr4.4:38331949-38331968 | None:intergenic | 30.0% | |
| ATACTATTCCATGAAGGAAA+TGG | - | chr4.4:38329133-38329152 | None:intergenic | 30.0% | |
| CAATGCATCTGATTTAATCA+GGG | + | chr4.4:38327837-38327856 | MS.gene45709:CDS | 30.0% | |
| CATCAAAAGACAAAAATGGA+GGG | - | chr4.4:38329175-38329194 | None:intergenic | 30.0% | |
| CATCAAAAGATAAAAAACGG+AGG | + | chr4.4:38329411-38329430 | MS.gene45709:intron | 30.0% | |
| CATTTAGTATGATTAAACCC+AGG | - | chr4.4:38329712-38329731 | None:intergenic | 30.0% | |
| GAAAATCTAATGATGCAGAA+AGG | - | chr4.4:38331138-38331157 | None:intergenic | 30.0% | |
| GAACAATAGCAACCTAATAA+CGG | - | chr4.4:38331965-38331984 | None:intergenic | 30.0% | |
| GACTTTATCAAATGACAACA+AGG | + | chr4.4:38330840-38330859 | MS.gene45709:CDS | 30.0% | |
| GATAAAGTCTTCAAGACATA+GGG | - | chr4.4:38330829-38330848 | None:intergenic | 30.0% | |
| GCTTATAACTGATGAACTTA+TGG | + | chr4.4:38328074-38328093 | MS.gene45709:intron | 30.0% | |
| GGTAAGAATATCTATCTCAT+TGG | + | chr4.4:38331768-38331787 | MS.gene45709:intron | 30.0% | |
| GTATGTAAGTTACCGTTATT+AGG | + | chr4.4:38331950-38331969 | MS.gene45709:intron | 30.0% | |
| TAAAAAGAGTCAAAGGAAAG+AGG | - | chr4.4:38331274-38331293 | None:intergenic | 30.0% | |
| TAACTTACATACAAGGAAGA+AGG | - | chr4.4:38331942-38331961 | None:intergenic | 30.0% | |
| TATGTGATTAAGGTTCTGTT+TGG | + | chr4.4:38328023-38328042 | MS.gene45709:intron | 30.0% | |
| TCAATGCATCTGATTTAATC+AGG | + | chr4.4:38327836-38327855 | MS.gene45709:CDS | 30.0% | |
| TGATAAAGTCTTCAAGACAT+AGG | - | chr4.4:38330830-38330849 | None:intergenic | 30.0% | |
| TGTGAGGAAAAATCATGTTT+GGG | - | chr4.4:38331104-38331123 | None:intergenic | 30.0% | |
| TTGTGAGGAAAAATCATGTT+TGG | - | chr4.4:38331105-38331124 | None:intergenic | 30.0% | |
| ! | AAAAGTAGCAACTTTTGCAT+TGG | - | chr4.4:38331557-38331576 | None:intergenic | 30.0% |
| ! | CTCATTAGTTTCAGTTATAC+AGG | + | chr4.4:38328950-38328969 | MS.gene45709:CDS | 30.0% |
| ! | TAGCTAATAAACTAGCTTCT+TGG | + | chr4.4:38328101-38328120 | MS.gene45709:intron | 30.0% |
| ! | TTCCTTTGACTCTTTTTAGA+TGG | + | chr4.4:38331276-38331295 | MS.gene45709:intron | 30.0% |
| ! | TTTTCAACAAGGGTAAACTT+GGG | - | chr4.4:38329257-38329276 | None:intergenic | 30.0% |
| !! | GTTATGTGTTTATGTTTTGG+TGG | + | chr4.4:38327951-38327970 | MS.gene45709:intron | 30.0% |
| !! | TATGGTGTGTTTTTCAACAA+GGG | - | chr4.4:38329267-38329286 | None:intergenic | 30.0% |
| !! | TGTATTTTTATCGTACCTTG+AGG | - | chr4.4:38330446-38330465 | None:intergenic | 30.0% |
| !! | TTATGGTGTGTTTTTCAACA+AGG | - | chr4.4:38329268-38329287 | None:intergenic | 30.0% |
| !! | TTTGGCAGATTTTTCAATTC+AGG | + | chr4.4:38329775-38329794 | MS.gene45709:intron | 30.0% |
| !! | TTTTTCAACAAGGGTAAACT+TGG | - | chr4.4:38329258-38329277 | None:intergenic | 30.0% |
| !!! | AAAGGTCTCAACTAGTTTTA+TGG | - | chr4.4:38329285-38329304 | None:intergenic | 30.0% |
| !!! | ATTTTTTGAAATGGGTCGTT+AGG | + | chr4.4:38327658-38327677 | MS.gene45709:intron | 30.0% |
| !!! | TCTTTTGATGTTTTAGCTCT+TGG | - | chr4.4:38329401-38329420 | None:intergenic | 30.0% |
| AAATGTTAACAAGTGCCCTA+AGG | - | chr4.4:38331597-38331616 | None:intergenic | 35.0% | |
| AACTACAGGTTGCCAAATAT+TGG | - | chr4.4:38331385-38331404 | None:intergenic | 35.0% | |
| AAGCTTATCTTTAGCAAAGC+AGG | + | chr4.4:38331032-38331051 | MS.gene45709:CDS | 35.0% | |
| AATCAATGTATGATCCCCTT+CGG | - | chr4.4:38328480-38328499 | None:intergenic | 35.0% | |
| AATGTTAACAAGTGCCCTAA+GGG | - | chr4.4:38331596-38331615 | None:intergenic | 35.0% | |
| ACATTCAAAACGCATAAGGA+AGG | + | chr4.4:38331840-38331859 | MS.gene45709:intron | 35.0% | |
| ACTCTGTTGAGATTTATGAG+TGG | + | chr4.4:38330740-38330759 | MS.gene45709:CDS | 35.0% | |
| ACTTACATACAAGGAAGAAG+GGG | - | chr4.4:38331940-38331959 | None:intergenic | 35.0% | |
| ATAGAATTGGAATGAGAGTG+AGG | - | chr4.4:38327356-38327375 | None:intergenic | 35.0% | |
| ATCAAGTCTGATGTGATCTT+GGG | + | chr4.4:38328515-38328534 | MS.gene45709:CDS | 35.0% | |
| ATCAAGTGAGTATTCCATAC+CGG | - | chr4.4:38329681-38329700 | None:intergenic | 35.0% | |
| ATCATCGTTGATCCTATAGA+TGG | - | chr4.4:38330619-38330638 | None:intergenic | 35.0% | |
| ATGCTTAAACAATGCCCTTA+GGG | + | chr4.4:38331579-38331598 | MS.gene45709:intron | 35.0% | |
| ATTAAATCCTTCCAATAGCC+TGG | + | chr4.4:38328733-38328752 | MS.gene45709:CDS | 35.0% | |
| ATTAATACCAGGCTATTGGA+AGG | - | chr4.4:38328743-38328762 | None:intergenic | 35.0% | |
| ATTCACATGTGATAAGCCAA+AGG | - | chr4.4:38329303-38329322 | None:intergenic | 35.0% | |
| ATTCATTGTGTCTGAAAGGA+CGG | - | chr4.4:38331696-38331715 | None:intergenic | 35.0% | |
| CAACGAGAAAAGTTCAAACT+AGG | - | chr4.4:38329031-38329050 | None:intergenic | 35.0% | |
| CACATCAAAACTTCTCTTCA+GGG | + | chr4.4:38331177-38331196 | MS.gene45709:intron | 35.0% | |
| CACCATCTAAAAAGAGTCAA+AGG | - | chr4.4:38331281-38331300 | None:intergenic | 35.0% | |
| CATTCAAAACGCATAAGGAA+GGG | + | chr4.4:38331841-38331860 | MS.gene45709:intron | 35.0% | |
| CTAATGAGATTGAAGATCCA+AGG | - | chr4.4:38328938-38328957 | None:intergenic | 35.0% | |
| CTATAGGATCAACGATGATT+TGG | + | chr4.4:38330620-38330639 | MS.gene45709:CDS | 35.0% | |
| CTCAACTGAAGTTAGCAAAT+GGG | + | chr4.4:38330401-38330420 | MS.gene45709:CDS | 35.0% | |
| CTTGGGAAGCAAAAAAATTG+AGG | + | chr4.4:38328532-38328551 | MS.gene45709:CDS | 35.0% | |
| GAAGTTATCCATTTCCTTCA+TGG | + | chr4.4:38329122-38329141 | MS.gene45709:intron | 35.0% | |
| GAATATCTATCTCATTGGGA+TGG | + | chr4.4:38331773-38331792 | MS.gene45709:intron | 35.0% | |
| GACTTGTCAACTTAGATTTC+GGG | - | chr4.4:38328905-38328924 | None:intergenic | 35.0% | |
| GAGGAATTCTAAACCCATAA+AGG | - | chr4.4:38331255-38331274 | None:intergenic | 35.0% | |
| GCATGTATACTATTCCATGA+AGG | - | chr4.4:38329139-38329158 | None:intergenic | 35.0% | |
| GGACTTGTCAACTTAGATTT+CGG | - | chr4.4:38328906-38328925 | None:intergenic | 35.0% | |
| GTCAAAAAATTGTTCACTGC+TGG | + | chr4.4:38330136-38330155 | MS.gene45709:intron | 35.0% | |
| GTGAAGGAATTGCATAGAAT+TGG | - | chr4.4:38327369-38327388 | None:intergenic | 35.0% | |
| GTGATGCTACTCAAATACAA+AGG | - | chr4.4:38331160-38331179 | None:intergenic | 35.0% | |
| TAACACTTTACTCACTTGGT+TGG | - | chr4.4:38329820-38329839 | None:intergenic | 35.0% | |
| TAATGAATTGGATCGAGACA+AGG | + | chr4.4:38329953-38329972 | MS.gene45709:intron | 35.0% | |
| TATCAAGTCTGATGTGATCT+TGG | + | chr4.4:38328514-38328533 | MS.gene45709:CDS | 35.0% | |
| TCACATCAAAACTTCTCTTC+AGG | + | chr4.4:38331176-38331195 | MS.gene45709:intron | 35.0% | |
| TCGTATTCATTGTGTCTGAA+AGG | - | chr4.4:38331700-38331719 | None:intergenic | 35.0% | |
| TCTCAACTGAAGTTAGCAAA+TGG | + | chr4.4:38330400-38330419 | MS.gene45709:CDS | 35.0% | |
| TGAACATCATCAGCTACATA+AGG | - | chr4.4:38330784-38330803 | None:intergenic | 35.0% | |
| TGCAATGTATGTCCTATGAA+TGG | - | chr4.4:38329505-38329524 | None:intergenic | 35.0% | |
| TGCTTAACACTTTACTCACT+TGG | - | chr4.4:38329824-38329843 | None:intergenic | 35.0% | |
| TTAAGGTTCCAGATGTCTAT+GGG | + | chr4.4:38330968-38330987 | MS.gene45709:CDS | 35.0% | |
| TTAATGAATGTCCAATTCCC+TGG | - | chr4.4:38328718-38328737 | None:intergenic | 35.0% | |
| TTCAAATCTCTTCAATCTCG+TGG | + | chr4.4:38327465-38327484 | MS.gene45709:CDS | 35.0% | |
| TTCCTTAAACAATGCCCTTA+GGG | - | chr4.4:38331466-38331485 | None:intergenic | 35.0% | |
| TTGAGATTTATGAGTGGTCT+GGG | + | chr4.4:38330746-38330765 | MS.gene45709:CDS | 35.0% | |
| ! | AGATTTGAAGTAGAGAGAGT+GGG | - | chr4.4:38327454-38327473 | None:intergenic | 35.0% |
| ! | CTTTTTGAATGTGATGCAGA+TGG | + | chr4.4:38332075-38332094 | MS.gene45709:intron | 35.0% |
| ! | TGCTTAATGTGTTGACATCA+AGG | + | chr4.4:38330548-38330567 | MS.gene45709:intron | 35.0% |
| ! | TTAATGTGTTGACATCAAGG+CGG | + | chr4.4:38330551-38330570 | MS.gene45709:intron | 35.0% |
| ! | TTTAAGGTTCCAGATGTCTA+TGG | + | chr4.4:38330967-38330986 | MS.gene45709:CDS | 35.0% |
| ! | TTTTAGATGGTGACCTCTTA+TGG | + | chr4.4:38331289-38331308 | MS.gene45709:intron | 35.0% |
| !! | AAAGGTGTGGAAATTTTGTG+AGG | - | chr4.4:38331120-38331139 | None:intergenic | 35.0% |
| !! | AATTGATGCTGCTGCTATTT+TGG | + | chr4.4:38327771-38327790 | MS.gene45709:CDS | 35.0% |
| !! | GGAGTATGTTTTTGTGTATC+TGG | + | chr4.4:38329433-38329452 | MS.gene45709:intron | 35.0% |
| !!! | TCTCGCTTTTGAAATATGCA+TGG | + | chr4.4:38329065-38329084 | MS.gene45709:intron | 35.0% |
| !!! | TTTTTTGGGTTGTGATGTGT+AGG | + | chr4.4:38327736-38327755 | MS.gene45709:intron | 35.0% |
| AAAATCGCGCTTCAGAGATA+CGG | + | chr4.4:38327522-38327541 | MS.gene45709:CDS | 40.0% | |
| AAAGTGGAGTATGACAGACT+TGG | + | chr4.4:38331003-38331022 | MS.gene45709:CDS | 40.0% | |
| AATGCTCGGATATTGATCTC+TGG | + | chr4.4:38329634-38329653 | MS.gene45709:CDS | 40.0% | |
| AATGTGCAACACCACAAAGT+TGG | + | chr4.4:38330576-38330595 | MS.gene45709:CDS | 40.0% | |
| AGATCTAGGGATCAATGAGT+TGG | + | chr4.4:38330010-38330029 | MS.gene45709:intron | 40.0% | |
| ATGTGCAACACCACAAAGTT+GGG | + | chr4.4:38330577-38330596 | MS.gene45709:CDS | 40.0% | |
| ATTGAAGATCCAAGGAGTGA+TGG | - | chr4.4:38328930-38328949 | None:intergenic | 40.0% | |
| ATTGGCTAGTGTAGGTAGAT+TGG | - | chr4.4:38330261-38330280 | None:intergenic | 40.0% | |
| CAAATGACAACAAGGTTCTC+TGG | + | chr4.4:38330848-38330867 | MS.gene45709:intron | 40.0% | |
| CAATATCTCTCTCACACTCT+AGG | + | chr4.4:38330277-38330296 | MS.gene45709:intron | 40.0% | |
| CGAAACTCACGTTCAATTGT+TGG | - | chr4.4:38327582-38327601 | None:intergenic | 40.0% | |
| CTAACGAACCATCCATCTAT+AGG | + | chr4.4:38330604-38330623 | MS.gene45709:CDS | 40.0% | |
| CTAGAGTGTGAGAGAGATAT+TGG | - | chr4.4:38330279-38330298 | None:intergenic | 40.0% | |
| CTGTTGCACGTAATGAGAAA+AGG | - | chr4.4:38328681-38328700 | None:intergenic | 40.0% | |
| CTTACATACAAGGAAGAAGG+GGG | - | chr4.4:38331939-38331958 | None:intergenic | 40.0% | |
| CTTGTTAACAAGTGCCCTAA+GGG | + | chr4.4:38331449-38331468 | MS.gene45709:intron | 40.0% | |
| GAAAATGCTGCTCCATAGTA+GGG | - | chr4.4:38331745-38331764 | None:intergenic | 40.0% | |
| GATGCTTAAACAATGCCCTT+AGG | + | chr4.4:38331578-38331597 | MS.gene45709:intron | 40.0% | |
| GCATAGCTATGTACCATAAG+AGG | - | chr4.4:38331305-38331324 | None:intergenic | 40.0% | |
| GCCATAGAGTTCTCAAGATT+CGG | - | chr4.4:38332042-38332061 | None:intergenic | 40.0% | |
| GGATTGCATGTTCTCTTTCA+GGG | + | chr4.4:38330928-38330947 | MS.gene45709:intron | 40.0% | |
| GTCAGGCTAGAAATAATGCT+CGG | + | chr4.4:38329620-38329639 | MS.gene45709:intron | 40.0% | |
| GTTCCTTAAACAATGCCCTT+AGG | - | chr4.4:38331467-38331486 | None:intergenic | 40.0% | |
| GTTGAGATTTATGAGTGGTC+TGG | + | chr4.4:38330745-38330764 | MS.gene45709:CDS | 40.0% | |
| TAAGGTTCCAGATGTCTATG+GGG | + | chr4.4:38330969-38330988 | MS.gene45709:CDS | 40.0% | |
| TAGAGCCTAAGTAGTAACTC+CGG | - | chr4.4:38330187-38330206 | None:intergenic | 40.0% | |
| TCGTTGATCCTATAGATGGA+TGG | - | chr4.4:38330615-38330634 | None:intergenic | 40.0% | |
| TCTAATGATGCAGAAAGGTG+TGG | - | chr4.4:38331133-38331152 | None:intergenic | 40.0% | |
| TCTTGTTAACAAGTGCCCTA+AGG | + | chr4.4:38331448-38331467 | MS.gene45709:intron | 40.0% | |
| TGAAAATGCTGCTCCATAGT+AGG | - | chr4.4:38331746-38331765 | None:intergenic | 40.0% | |
| TGTCATACTCCACTTTGAAC+TGG | - | chr4.4:38330999-38331018 | None:intergenic | 40.0% | |
| TTACATACAAGGAAGAAGGG+GGG | - | chr4.4:38331938-38331957 | None:intergenic | 40.0% | |
| ! | AGAGAGATATTGGCTAGTGT+AGG | - | chr4.4:38330269-38330288 | None:intergenic | 40.0% |
| ! | CTATGGAGCAGCATTTTCAA+TGG | + | chr4.4:38331747-38331766 | MS.gene45709:CDS | 40.0% |
| ! | CTTTTCTCATTACGTGCAAC+AGG | + | chr4.4:38328679-38328698 | MS.gene45709:intron | 40.0% |
| ! | GAGATTTGAAGTAGAGAGAG+TGG | - | chr4.4:38327455-38327474 | None:intergenic | 40.0% |
| ! | TCACTTGATCTTGTTAGCCT+GGG | + | chr4.4:38329692-38329711 | MS.gene45709:intron | 40.0% |
| ! | TGTCAACTTAGATTTCGGGT+TGG | - | chr4.4:38328901-38328920 | None:intergenic | 40.0% |
| !! | AAATGGGTTTTCCACGAAAG+AGG | + | chr4.4:38330417-38330436 | MS.gene45709:CDS | 40.0% |
| !! | TTGTGATGTGTAGGTTTTGG+AGG | + | chr4.4:38327745-38327764 | MS.gene45709:intron | 40.0% |
| !!! | GTAACTGTCATTTTCTCACG+AGG | - | chr4.4:38328314-38328333 | None:intergenic | 40.0% |
| !!! | TATCTCTGAAGCGCGATTTT+GGG | - | chr4.4:38327522-38327541 | None:intergenic | 40.0% |
| AACAACAGACACGACAAGTC+AGG | + | chr4.4:38330366-38330385 | MS.gene45709:intron | 45.0% | |
| AACCACAGCACCATAATCCT+AGG | - | chr4.4:38328426-38328445 | None:intergenic | 45.0% | |
| AATTCAGGTGTGCAGAAAGC+TGG | + | chr4.4:38329790-38329809 | MS.gene45709:CDS | 45.0% | |
| ACAAACACGCTACGCCTTTA+TGG | + | chr4.4:38331238-38331257 | MS.gene45709:intron | 45.0% | |
| AGCTCTTGGCACAAGTCTTA+AGG | - | chr4.4:38329387-38329406 | None:intergenic | 45.0% | |
| AGGGAAATTGCTACTGAGTG+TGG | + | chr4.4:38327856-38327875 | MS.gene45709:CDS | 45.0% | |
| CAAACACGCTACGCCTTTAT+GGG | + | chr4.4:38331239-38331258 | MS.gene45709:intron | 45.0% | |
| CAATGGCACACATACACAGT+AGG | - | chr4.4:38328995-38329014 | None:intergenic | 45.0% | |
| CATAGTAGGGATAAGCAGCT+GGG | - | chr4.4:38331732-38331751 | None:intergenic | 45.0% | |
| CATTGAGCATGTTCAGCAAC+CGG | + | chr4.4:38329659-38329678 | MS.gene45709:CDS | 45.0% | |
| CGAAGTCATCGAGTAAGACA+AGG | - | chr4.4:38327419-38327438 | None:intergenic | 45.0% | |
| CGCATAAGGAAGGGAAAATC+CGG | + | chr4.4:38331850-38331869 | MS.gene45709:intron | 45.0% | |
| CGTCGATCTGAAGGTTTATC+GGG | - | chr4.4:38327393-38327412 | None:intergenic | 45.0% | |
| CTCACTTGATCTTGTTAGCC+TGG | + | chr4.4:38329691-38329710 | MS.gene45709:intron | 45.0% | |
| GAGAGAGTGGGAAGATTTGA+TGG | - | chr4.4:38327442-38327461 | None:intergenic | 45.0% | |
| GCCGAATCTTGAGAACTCTA+TGG | + | chr4.4:38332038-38332057 | MS.gene45709:intron | 45.0% | |
| GGGATTGCATGTTCTCTTTC+AGG | + | chr4.4:38330927-38330946 | MS.gene45709:intron | 45.0% | |
| TGAAGGTTTATCGGGAGTGA+AGG | - | chr4.4:38327385-38327404 | None:intergenic | 45.0% | |
| TGGAAAACCCCATAGACATC+TGG | - | chr4.4:38330979-38330998 | None:intergenic | 45.0% | |
| TGTGCAACACCACAAAGTTG+GGG | + | chr4.4:38330578-38330597 | MS.gene45709:CDS | 45.0% | |
| TTGAATGTGATGCAGATGGC+AGG | + | chr4.4:38332079-38332098 | MS.gene45709:intron | 45.0% | |
| ! | CAATGAGTTGGATCGAGACA+TGG | + | chr4.4:38330022-38330041 | MS.gene45709:intron | 45.0% |
| ! | CCAATTCCCTGGAAAAGTAC+TGG | - | chr4.4:38328707-38328726 | None:intergenic | 45.0% |
| ! | CCAGTACTTTTCCAGGGAAT+TGG | + | chr4.4:38328704-38328723 | MS.gene45709:CDS | 45.0% |
| ! | CGTTAGTTTCCCCAACTTTG+TGG | - | chr4.4:38330590-38330609 | None:intergenic | 45.0% |
| ! | GCGTCGATCTGAAGGTTTAT+CGG | - | chr4.4:38327394-38327413 | None:intergenic | 45.0% |
| ! | GGGTTGTGATGTGTAGGTTT+TGG | + | chr4.4:38327742-38327761 | MS.gene45709:intron | 45.0% |
| ! | GTGTGGAGTTGACTTTGATG+AGG | + | chr4.4:38327873-38327892 | MS.gene45709:CDS | 45.0% |
| ! | TGGGGTTTTCCAGTTCAAAG+TGG | + | chr4.4:38330987-38331006 | MS.gene45709:CDS | 45.0% |
| ! | TTCCTAGGATTATGGTGCTG+TGG | + | chr4.4:38328421-38328440 | MS.gene45709:intron | 45.0% |
| !! | AGGTACCGGAGTTACTACTT+AGG | + | chr4.4:38330179-38330198 | MS.gene45709:intron | 45.0% |
| !! | TGCCCTAAGGGCATTGTTTA+AGG | + | chr4.4:38331461-38331480 | MS.gene45709:intron | 45.0% |
| !!! | ATCTCTGAAGCGCGATTTTG+GGG | - | chr4.4:38327521-38327540 | None:intergenic | 45.0% |
| !!! | GTATCTCTGAAGCGCGATTT+TGG | - | chr4.4:38327523-38327542 | None:intergenic | 45.0% |
| !!! | TTTTGGTGGTGCAATGTGCT+TGG | + | chr4.4:38327965-38327984 | MS.gene45709:intron | 45.0% |
| !!! | AATTATTGATAATAATAATA+AGG | + | chr4.4:38331424-38331443 | MS.gene45709:intron | 5.0% |
| !!! | ATTATTGATAATAATAATAA+GGG | + | chr4.4:38331425-38331444 | MS.gene45709:intron | 5.0% |
| ACTAAGTGGGATCGGCTACA+TGG | - | chr4.4:38330079-38330098 | None:intergenic | 50.0% | |
| AGCATGTTCAGCAACCGGTA+TGG | + | chr4.4:38329664-38329683 | MS.gene45709:intron | 50.0% | |
| AGGACGGACAGGAATCTACA+AGG | - | chr4.4:38331680-38331699 | None:intergenic | 50.0% | |
| ATGCAGTCTCTGCTACCGAA+GGG | + | chr4.4:38328462-38328481 | MS.gene45709:CDS | 50.0% | |
| ATGTAGCCGATCCCACTTAG+TGG | + | chr4.4:38330078-38330097 | MS.gene45709:intron | 50.0% | |
| CAAGCCTTCTCCCACTAAGT+GGG | - | chr4.4:38330092-38330111 | None:intergenic | 50.0% | |
| CCAGCTGCTTATCCCTACTA+TGG | + | chr4.4:38331730-38331749 | MS.gene45709:CDS | 50.0% | |
| CCATAGTAGGGATAAGCAGC+TGG | - | chr4.4:38331733-38331752 | None:intergenic | 50.0% | |
| CTTCTCCCACTAAGTGGGAT+CGG | - | chr4.4:38330087-38330106 | None:intergenic | 50.0% | |
| GAAGATCCAAGGAGTGATGG+CGG | - | chr4.4:38328927-38328946 | None:intergenic | 50.0% | |
| GCTGTGGTTGTAGATCATGC+TGG | + | chr4.4:38328437-38328456 | MS.gene45709:CDS | 50.0% | |
| GGACGGACAGGAATCTACAA+GGG | - | chr4.4:38331679-38331698 | None:intergenic | 50.0% | |
| TATGCAGTCTCTGCTACCGA+AGG | + | chr4.4:38328461-38328480 | MS.gene45709:CDS | 50.0% | |
| TGGCACACATACACAGTAGG+AGG | - | chr4.4:38328992-38329011 | None:intergenic | 50.0% | |
| TGTAGCCGATCCCACTTAGT+GGG | + | chr4.4:38330079-38330098 | MS.gene45709:intron | 50.0% | |
| TTGTGTCTGAAAGGACGGAC+AGG | - | chr4.4:38331691-38331710 | None:intergenic | 50.0% | |
| ! | ACAAGGATGCGTCGATCTGA+AGG | - | chr4.4:38327402-38327421 | None:intergenic | 50.0% |
| ! | ACAGGCTCCAGTACTTTTCC+AGG | + | chr4.4:38328697-38328716 | MS.gene45709:intron | 50.0% |
| ! | ATGAGTGGTCTGGGACAACA+TGG | + | chr4.4:38330755-38330774 | MS.gene45709:CDS | 50.0% |
| ! | CAGGCTCCAGTACTTTTCCA+GGG | + | chr4.4:38328698-38328717 | MS.gene45709:intron | 50.0% |
| ! | GGGTTGGCAGAAAAAGCTGT+AGG | - | chr4.4:38328885-38328904 | None:intergenic | 50.0% |
| ! | TGAGTGGTCTGGGACAACAT+GGG | + | chr4.4:38330756-38330775 | MS.gene45709:CDS | 50.0% |
| ACAAGTCCGCCATCACTCCT+TGG | + | chr4.4:38328918-38328937 | MS.gene45709:CDS | 55.0% | |
| CCAAGCCTTCTCCCACTAAG+TGG | - | chr4.4:38330093-38330112 | None:intergenic | 55.0% | |
| CCACGAAAGAGGTCACCTCA+AGG | + | chr4.4:38330428-38330447 | MS.gene45709:CDS | 55.0% | |
| CCACTTAGTGGGAGAAGGCT+TGG | + | chr4.4:38330090-38330109 | MS.gene45709:intron | 55.0% | |
| CCTTGAGGTGACCTCTTTCG+TGG | - | chr4.4:38330431-38330450 | None:intergenic | 55.0% | |
| CGATCCCACTTAGTGGGAGA+AGG | + | chr4.4:38330085-38330104 | MS.gene45709:intron | 55.0% | |
| TGCAGTCTCTGCTACCGAAG+GGG | + | chr4.4:38328463-38328482 | MS.gene45709:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 38327327 | 38332141 | 38327327 | ID=MS.gene45709 |
| chr4.4 | mRNA | 38327327 | 38332141 | 38327327 | ID=MS.gene45709.t1;Parent=MS.gene45709 |
| chr4.4 | exon | 38327327 | 38327591 | 38327327 | ID=MS.gene45709.t1.exon1;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38327327 | 38327591 | 38327327 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38327758 | 38327894 | 38327758 | ID=MS.gene45709.t1.exon2;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38327758 | 38327894 | 38327758 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38328428 | 38328553 | 38328428 | ID=MS.gene45709.t1.exon3;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38328428 | 38328553 | 38328428 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38328701 | 38328754 | 38328701 | ID=MS.gene45709.t1.exon4;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38328701 | 38328754 | 38328701 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38328858 | 38328971 | 38328858 | ID=MS.gene45709.t1.exon5;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38328858 | 38328971 | 38328858 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38329625 | 38329680 | 38329625 | ID=MS.gene45709.t1.exon6;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38329625 | 38329680 | 38329625 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38329783 | 38329824 | 38329783 | ID=MS.gene45709.t1.exon7;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38329783 | 38329824 | 38329783 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38330374 | 38330449 | 38330374 | ID=MS.gene45709.t1.exon8;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38330374 | 38330449 | 38330374 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38330570 | 38330641 | 38330570 | ID=MS.gene45709.t1.exon9;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38330570 | 38330641 | 38330570 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38330736 | 38330861 | 38330736 | ID=MS.gene45709.t1.exon10;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38330736 | 38330861 | 38330736 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38330949 | 38331053 | 38330949 | ID=MS.gene45709.t1.exon11;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38330949 | 38331053 | 38330949 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38331685 | 38331768 | 38331685 | ID=MS.gene45709.t1.exon12;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38331685 | 38331768 | 38331685 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| chr4.4 | exon | 38332094 | 38332141 | 38332094 | ID=MS.gene45709.t1.exon13;Parent=MS.gene45709.t1 |
| chr4.4 | CDS | 38332094 | 38332141 | 38332094 | ID=cds.MS.gene45709.t1;Parent=MS.gene45709.t1 |
| Gene Sequence |
| Protein sequence |
