Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47747.t1 | AET00208.2 | 95.6 | 840 | 26 | 1 | 1 | 829 | 32 | 871 | 0.00E+00 | 1521.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47747.t1 | Q8RWQ4 | 67.4 | 849 | 247 | 10 | 1 | 829 | 32 | 870 | 2.0e-293 | 1009.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47747.t1 | G7K336 | 95.6 | 840 | 26 | 1 | 1 | 829 | 32 | 871 | 0.0e+00 | 1521.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene47747 | 0.820141 | 8.02E-53 | -1.69E-46 |
| MS.gene049887 | MS.gene47747 | 0.828451 | 8.93E-55 | -1.69E-46 |
| MS.gene050551 | MS.gene47747 | 0.811587 | 6.50E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene47747 | 0.83714 | 6.20E-57 | -1.69E-46 |
| MS.gene050657 | MS.gene47747 | 0.806719 | 7.18E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene47747 | 0.817274 | 3.59E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene47747 | 0.807807 | 4.22E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene47747 | 0.836875 | 7.24E-57 | -1.69E-46 |
| MS.gene052397 | MS.gene47747 | 0.80988 | 1.52E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene47747 | 0.852764 | 3.73E-61 | -1.69E-46 |
| MS.gene052665 | MS.gene47747 | 0.805075 | 1.59E-49 | -1.69E-46 |
| MS.gene054824 | MS.gene47747 | 0.857161 | 1.97E-62 | -1.69E-46 |
| MS.gene055313 | MS.gene47747 | 0.807559 | 4.76E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene47747 | 0.804955 | 1.68E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene47747 | 0.844865 | 5.80E-59 | -1.69E-46 |
| MS.gene055513 | MS.gene47747 | 0.818137 | 2.29E-52 | -1.69E-46 |
| MS.gene056181 | MS.gene47747 | 0.802834 | 4.65E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene47747 | 0.822067 | 2.89E-53 | -1.69E-46 |
| MS.gene056390 | MS.gene47747 | 0.819628 | 1.05E-52 | -1.69E-46 |
| MS.gene056507 | MS.gene47747 | 0.814657 | 1.38E-51 | -1.69E-46 |
| MS.gene058289 | MS.gene47747 | 0.808452 | 3.08E-50 | -1.69E-46 |
| MS.gene058638 | MS.gene47747 | 0.87637 | 1.47E-68 | -1.69E-46 |
| MS.gene058639 | MS.gene47747 | 0.876732 | 1.11E-68 | -1.69E-46 |
| MS.gene058647 | MS.gene47747 | 0.842138 | 3.11E-58 | -1.69E-46 |
| MS.gene058649 | MS.gene47747 | 0.817381 | 3.40E-52 | -1.69E-46 |
| MS.gene058720 | MS.gene47747 | 0.819854 | 9.33E-53 | -1.69E-46 |
| MS.gene058758 | MS.gene47747 | 0.840535 | 8.20E-58 | -1.69E-46 |
| MS.gene059170 | MS.gene47747 | 0.814618 | 1.41E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene47747 | 0.83171 | 1.43E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene47747 | 0.820943 | 5.25E-53 | -1.69E-46 |
| MS.gene059725 | MS.gene47747 | 0.801729 | 7.85E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene47747 | 0.83318 | 6.18E-56 | -1.69E-46 |
| MS.gene060373 | MS.gene47747 | 0.805166 | 1.52E-49 | -1.69E-46 |
| MS.gene060380 | MS.gene47747 | 0.826524 | 2.59E-54 | -1.69E-46 |
| MS.gene060400 | MS.gene47747 | 0.828152 | 1.05E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene47747 | 0.804672 | 1.93E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene47747 | 0.845321 | 4.37E-59 | -1.69E-46 |
| MS.gene061006 | MS.gene47747 | 0.840957 | 6.36E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 180 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCTTGGTGTTGTTGATTC+TGG | 0.190473 | 5.2:-75927503 | MS.gene47747:CDS |
| CATAACCTTGATTTGAACTA+TGG | 0.247874 | 5.2:-75927043 | MS.gene47747:CDS |
| AATATTGATGTAAAAGAAAA+TGG | 0.272680 | 5.2:-75930473 | MS.gene47747:CDS |
| GTGGAATCGGTTGATTCTTC+TGG | 0.276949 | 5.2:-75929050 | MS.gene47747:CDS |
| GTACTAAGCGGTCAACATTC+TGG | 0.280744 | 5.2:-75929590 | MS.gene47747:CDS |
| GTCTTTGCTGATTAAGTTGA+TGG | 0.283757 | 5.2:+75928266 | None:intergenic |
| TCAATTTACAGCATGTTCTA+AGG | 0.288440 | 5.2:-75932493 | MS.gene47747:intron |
| TTCTCAGACAGATGGTTATC+AGG | 0.288648 | 5.2:+75929810 | None:intergenic |
| GCGCTTCAATCACAGGTAAA+TGG | 0.291334 | 5.2:+75929667 | None:intergenic |
| CTCACGGTTGAGGAAGATTC+TGG | 0.297089 | 5.2:+75928194 | None:intergenic |
| GGTATTGACTTAAACAATTC+AGG | 0.298761 | 5.2:-75934635 | MS.gene47747:CDS |
| CTTCTCATTCTAACATGAAT+AGG | 0.304870 | 5.2:-75930862 | MS.gene47747:CDS |
| TTCTGCTGTTGCTGCTTGCA+TGG | 0.325403 | 5.2:-75930831 | MS.gene47747:CDS |
| TGAATCCATCCCACGTGAAT+TGG | 0.336829 | 5.2:+75928454 | None:intergenic |
| CTCTGTAACAAACGTCGATT+TGG | 0.339972 | 5.2:+75931008 | None:intergenic |
| CTAGGACTCGAGTCTATAAA+TGG | 0.340472 | 5.2:+75927569 | None:intergenic |
| ACCAAGTGCTGCCCTTGTTA+TGG | 0.347787 | 5.2:-75934381 | MS.gene47747:CDS |
| CTTAGGTTTCTAGAGAAGTA+TGG | 0.349727 | 5.2:-75933997 | MS.gene47747:intron |
| TTTCAACAGGAGAGTGTGTT+AGG | 0.353439 | 5.2:-75927662 | MS.gene47747:intron |
| GCTCAGTGCCTTCCACTTCA+AGG | 0.363371 | 5.2:-75927481 | MS.gene47747:CDS |
| GTGCCCTTGCAGCAGGCATT+TGG | 0.364013 | 5.2:-75929906 | MS.gene47747:intron |
| AACTCGAGAATCAGCTGAAA+TGG | 0.367018 | 5.2:+75930532 | None:intergenic |
| ATTGAAGCGCAATCAGGTTC+TGG | 0.368082 | 5.2:-75929654 | MS.gene47747:CDS |
| CTCTTACGGCCTCTGTTAGC+TGG | 0.375756 | 5.2:-75930800 | MS.gene47747:CDS |
| GTTGGTTTGAGCATGTCTTC+AGG | 0.383362 | 5.2:-75928485 | MS.gene47747:CDS |
| GCATGGCACCCTTGCTCTTA+CGG | 0.389496 | 5.2:-75930814 | MS.gene47747:CDS |
| GGAAAGGCGTTCGCAGTTGA+TGG | 0.389567 | 5.2:-75927074 | MS.gene47747:CDS |
| CCAAGTGCTGCCCTTGTTAT+GGG | 0.390257 | 5.2:-75934380 | MS.gene47747:CDS |
| CAAGCGTCCAGTCAAGTCTT+TGG | 0.395066 | 5.2:-75934088 | MS.gene47747:CDS |
| CAGCACTTGGTGCTTGTGCA+AGG | 0.396878 | 5.2:+75934393 | None:intergenic |
| TTCATGCTGTACTGCTTTGT+TGG | 0.398817 | 5.2:-75932444 | MS.gene47747:CDS |
| TACTAAGCGGTCAACATTCT+GGG | 0.399894 | 5.2:-75929589 | MS.gene47747:CDS |
| CCAGTCAAGTCTTTGGTTGT+TGG | 0.403002 | 5.2:-75934081 | MS.gene47747:CDS |
| AGCTATTATTACCACTTTGT+TGG | 0.403774 | 5.2:-75930690 | MS.gene47747:CDS |
| TTTCAGGTGACAGAATATAA+TGG | 0.406198 | 5.2:-75927160 | MS.gene47747:intron |
| TTCCGAAGTCTCCGCCTTAA+GGG | 0.407357 | 5.2:+75934451 | None:intergenic |
| TGCAATGCGCTGTGCTGTAT+TGG | 0.415539 | 5.2:-75931045 | MS.gene47747:CDS |
| TCCACTGACGGTGACTTCCT+TGG | 0.420061 | 5.2:+75929068 | None:intergenic |
| TGTGCCACTACTAGCTTTAC+CGG | 0.425553 | 5.2:+75929620 | None:intergenic |
| ATAACGAGTACGAACATTGA+TGG | 0.425634 | 5.2:+75934306 | None:intergenic |
| CCTGTGATTGAAGCGCAATC+AGG | 0.428704 | 5.2:-75929660 | MS.gene47747:CDS |
| GCTCGACCATCACGCCCGTC+TGG | 0.437464 | 5.2:+75934479 | None:intergenic |
| CTTAGAGCTGCATTGGAAGT+TGG | 0.440680 | 5.2:-75928503 | MS.gene47747:CDS |
| TCTGTTGAAGGCAACACAAT+TGG | 0.441433 | 5.2:+75929738 | None:intergenic |
| TATACTCACACGCACATCAT+TGG | 0.442123 | 5.2:-75935200 | MS.gene47747:CDS |
| CAAGTATTGGCTTCTGGTAA+TGG | 0.443179 | 5.2:-75927614 | MS.gene47747:CDS |
| ATCACAGGTAAATGGTTGCC+AGG | 0.445948 | 5.2:+75929675 | None:intergenic |
| CTTCCCCACCTCTCTGTGGA+AGG | 0.445993 | 5.2:+75934675 | None:intergenic |
| AGCACTTGGTGCTTGTGCAA+GGG | 0.446894 | 5.2:+75934394 | None:intergenic |
| AAAGGACAAGTATTGGCTTC+TGG | 0.450625 | 5.2:-75927620 | MS.gene47747:CDS |
| GAAGTCACCGTCAGTGGAAT+CGG | 0.450841 | 5.2:-75929063 | MS.gene47747:CDS |
| GGAGGAGATGATTCTGATGT+TGG | 0.452355 | 5.2:-75929885 | MS.gene47747:CDS |
| GTACAGCATGAAGCTGGAAC+TGG | 0.454511 | 5.2:+75932455 | None:intergenic |
| AACAGAATCTTATCGTTCCA+TGG | 0.456141 | 5.2:-75929721 | MS.gene47747:CDS |
| AGTGAAAGTAGTGGTTATGC+TGG | 0.462074 | 5.2:-75930377 | MS.gene47747:CDS |
| TCTTCAAGTGCTAGCAGAAT+CGG | 0.462426 | 5.2:+75934054 | None:intergenic |
| CAGCAAAGACAGCATCACTA+TGG | 0.464164 | 5.2:-75928253 | MS.gene47747:CDS |
| ATGCTGTACTGCTTTGTTGG+AGG | 0.467931 | 5.2:-75932441 | MS.gene47747:CDS |
| TTTGCAGGAACTAAAGTTGA+AGG | 0.469978 | 5.2:-75933040 | MS.gene47747:intron |
| GTAAACCATGTCTTGGGAAG+TGG | 0.470066 | 5.2:+75927015 | None:intergenic |
| GAACGATAAGATTCTGTTGA+AGG | 0.472368 | 5.2:+75929726 | None:intergenic |
| CCCTTGCAGCAGGCATTTGG+AGG | 0.472401 | 5.2:-75929903 | MS.gene47747:intron |
| TTGGTTTGTAAACCATGTCT+TGG | 0.488897 | 5.2:+75927008 | None:intergenic |
| AGCTTTGCATGAACGACGCT+TGG | 0.491120 | 5.2:-75928663 | MS.gene47747:CDS |
| TGTTGTTGGTGACTGTGTTA+AGG | 0.491134 | 5.2:-75932592 | MS.gene47747:intron |
| TACAAGCAAGCTTAGAGAGA+AGG | 0.491160 | 5.2:-75928691 | MS.gene47747:CDS |
| GATTTCCAATTCACGTGGGA+TGG | 0.491996 | 5.2:-75928459 | MS.gene47747:CDS |
| TGGCTTCTGGTAATGGTAGT+AGG | 0.494599 | 5.2:-75927607 | MS.gene47747:CDS |
| AACAAACGTCGATTTGGCTC+TGG | 0.496235 | 5.2:+75931014 | None:intergenic |
| TACCTCTGCTGCCCTTGAAG+TGG | 0.499455 | 5.2:+75927469 | None:intergenic |
| TATTATTACCACTTTGTTGG+AGG | 0.500765 | 5.2:-75930687 | MS.gene47747:CDS |
| GAGGGATCTTAGAGCTGCAT+TGG | 0.502833 | 5.2:-75928510 | MS.gene47747:CDS |
| GAGGAAGATGCGCATGTTGT+TGG | 0.504636 | 5.2:-75932606 | MS.gene47747:CDS |
| GATACAACTGATTCTATTGA+CGG | 0.505893 | 5.2:-75934335 | MS.gene47747:CDS |
| AAGTGATCTTTATGATTACA+AGG | 0.507158 | 5.2:-75930354 | MS.gene47747:intron |
| TTTCATGATTACAGTATGCA+AGG | 0.509536 | 5.2:+75928048 | None:intergenic |
| GGTTCTGGAAAGCAAACAAC+CGG | 0.511044 | 5.2:-75929639 | MS.gene47747:CDS |
| CAACTCCATGATGGTGATGT+TGG | 0.512334 | 5.2:+75926989 | None:intergenic |
| TGGTCGAGCATTCACCCTTA+AGG | 0.512615 | 5.2:-75934465 | MS.gene47747:intron |
| CTCAGTGCCTTCCACTTCAA+GGG | 0.514840 | 5.2:-75927480 | MS.gene47747:CDS |
| CCTGATTGCGCTTCAATCAC+AGG | 0.516573 | 5.2:+75929660 | None:intergenic |
| AGAGTGTGTTAGGCTCTGAT+TGG | 0.519968 | 5.2:-75927652 | MS.gene47747:CDS |
| GTTGAAGGCAACACAATTGG+TGG | 0.520485 | 5.2:+75929741 | None:intergenic |
| AATAGCTTGAGCGTTATTTG+CGG | 0.520779 | 5.2:+75930706 | None:intergenic |
| AGCGGTCAACATTCTGGGGC+AGG | 0.523790 | 5.2:-75929584 | MS.gene47747:CDS |
| GAGGAAGATTCTGGGCATGC+TGG | 0.526930 | 5.2:+75928203 | None:intergenic |
| AAAGGTTGAGTTTGATGCAG+AGG | 0.527372 | 5.2:-75932625 | MS.gene47747:CDS |
| AAATATCAAAGGACAAGTAT+TGG | 0.527848 | 5.2:-75927627 | MS.gene47747:CDS |
| AAAGCAGTACAGCATGAAGC+TGG | 0.529674 | 5.2:+75932449 | None:intergenic |
| TTTACAAGAAATTGATCGCA+AGG | 0.529791 | 5.2:-75931081 | MS.gene47747:intron |
| TTGCTGAAGCTGATGTGGCT+AGG | 0.533496 | 5.2:-75928315 | MS.gene47747:CDS |
| TTCCATTGTGTCCCATAACA+AGG | 0.533878 | 5.2:+75934369 | None:intergenic |
| TAGAACCATAGTTCAAATCA+AGG | 0.535006 | 5.2:+75927038 | None:intergenic |
| AAATTGATCGCAAGGAGGCT+AGG | 0.535648 | 5.2:-75931073 | MS.gene47747:CDS |
| TGTCAGCATACTCACGGTTG+AGG | 0.536698 | 5.2:+75928184 | None:intergenic |
| TCACGGTTGAGGAAGATTCT+GGG | 0.537133 | 5.2:+75928195 | None:intergenic |
| TAGGAATAGGATGGAAGTCA+TGG | 0.541281 | 5.2:-75935237 | MS.gene47747:CDS |
| AGAACAGTTGCAAGCTGAGA+GGG | 0.542656 | 5.2:-75928528 | MS.gene47747:CDS |
| GAAGCTGGAACTGGAGAGGA+AGG | 0.543717 | 5.2:+75932464 | None:intergenic |
| ACAGAATCTTATCGTTCCAT+GGG | 0.544697 | 5.2:-75929720 | MS.gene47747:CDS |
| CTAGCACTTGAAGATATTGA+CGG | 0.546652 | 5.2:-75934045 | MS.gene47747:CDS |
| CTCTACTAGTAATCATGCTA+AGG | 0.546718 | 5.2:-75929859 | MS.gene47747:CDS |
| CCCATAACAAGGGCAGCACT+TGG | 0.547020 | 5.2:+75934380 | None:intergenic |
| CCAACAACCAAAGACTTGAC+TGG | 0.548043 | 5.2:+75934081 | None:intergenic |
| TAACAGAGGCCGTAAGAGCA+AGG | 0.552011 | 5.2:+75930805 | None:intergenic |
| TGGTTTGTAAACCATGTCTT+GGG | 0.553794 | 5.2:+75927009 | None:intergenic |
| AGACATGCTTGTCGATGCCT+CGG | 0.556250 | 5.2:+75927532 | None:intergenic |
| TTCTACCACTTCCCAAGACA+TGG | 0.556457 | 5.2:-75927020 | MS.gene47747:CDS |
| TCTATAAATGGCTTCCGAGA+TGG | 0.557311 | 5.2:+75927581 | None:intergenic |
| CAATTTACAGCATGTTCTAA+GGG | 0.558033 | 5.2:-75932492 | MS.gene47747:intron |
| GCCAAGGAAGTCACCGTCAG+TGG | 0.558441 | 5.2:-75929069 | MS.gene47747:CDS |
| TTGCATACTGTAATCATGAA+AGG | 0.559093 | 5.2:-75928046 | MS.gene47747:CDS |
| GAATAAAAGCAATCAAAGAA+AGG | 0.561570 | 5.2:-75929790 | MS.gene47747:CDS |
| GTTATTTGCGGCATTAGCAG+CGG | 0.565544 | 5.2:+75930718 | None:intergenic |
| TTCATGATTACAGTATGCAA+GGG | 0.566846 | 5.2:+75928049 | None:intergenic |
| TTATTTCCAGACGGGCGTGA+TGG | 0.567936 | 5.2:-75934485 | MS.gene47747:CDS |
| TTACAGTATTATTTCCAGAC+GGG | 0.567974 | 5.2:-75934493 | MS.gene47747:CDS |
| ACGTCGATTTGGCTCTGGAA+AGG | 0.569516 | 5.2:+75931019 | None:intergenic |
| TTCACGTGGGATGGATTCAA+AGG | 0.570384 | 5.2:-75928450 | MS.gene47747:intron |
| AACAGAGGCCGTAAGAGCAA+GGG | 0.572474 | 5.2:+75930806 | None:intergenic |
| TTCCACTTCAAGGGCAGCAG+AGG | 0.574764 | 5.2:-75927471 | MS.gene47747:intron |
| CTTACAGTATTATTTCCAGA+CGG | 0.575678 | 5.2:-75934494 | MS.gene47747:CDS |
| GTACCCTTCCACAGAGAGGT+GGG | 0.576031 | 5.2:-75934679 | MS.gene47747:CDS |
| ATTCTCGAGTTGAAAACAGC+GGG | 0.576151 | 5.2:-75930520 | MS.gene47747:CDS |
| CAAATCGACGTTTGTTACAG+AGG | 0.577379 | 5.2:-75931007 | MS.gene47747:intron |
| TGCACTTGCTGAAGCTGATG+TGG | 0.578506 | 5.2:-75928320 | MS.gene47747:CDS |
| GGTTGATTCTTCTGGAGAAG+AGG | 0.579072 | 5.2:-75929042 | MS.gene47747:CDS |
| AAAGACAAAGGCTGAGCTAG+AGG | 0.580232 | 5.2:-75928347 | MS.gene47747:intron |
| ACAAACCAACATCACCATCA+TGG | 0.581238 | 5.2:-75926994 | MS.gene47747:CDS |
| GTTAGCTGGAGAATGTGAGC+TGG | 0.582566 | 5.2:-75930786 | MS.gene47747:CDS |
| TTTACTTCCCCACCTCTCTG+TGG | 0.584183 | 5.2:+75934671 | None:intergenic |
| TGAAGATAAAATCTCACCCA+TGG | 0.584703 | 5.2:+75929704 | None:intergenic |
| CTTAGCATGATTACTAGTAG+AGG | 0.585994 | 5.2:+75929860 | None:intergenic |
| ATACAACTGATTCTATTGAC+GGG | 0.586215 | 5.2:-75934334 | MS.gene47747:CDS |
| CTCATACTCCTCCAACAAAG+TGG | 0.587009 | 5.2:+75930679 | None:intergenic |
| TTCCCCACCTCTCTGTGGAA+GGG | 0.587561 | 5.2:+75934676 | None:intergenic |
| TTTGCAACATAGAATTGCAA+AGG | 0.589536 | 5.2:-75928822 | MS.gene47747:CDS |
| TGTGGCTAGGTTGAAGCAAA+AGG | 0.591297 | 5.2:-75928302 | MS.gene47747:CDS |
| GAGGATGAATTTGATGTTAG+CGG | 0.591779 | 5.2:-75930764 | MS.gene47747:CDS |
| TGGGGAAGTAAACATGACAC+TGG | 0.595476 | 5.2:-75934660 | MS.gene47747:CDS |
| ATGGTAGTAGGCAGCCATCT+CGG | 0.596802 | 5.2:-75927595 | MS.gene47747:CDS |
| GCAACATAGAATTGCAAAGG+AGG | 0.599914 | 5.2:-75928819 | MS.gene47747:intron |
| AAGAACAGTTGCAAGCTGAG+AGG | 0.599976 | 5.2:-75928529 | MS.gene47747:CDS |
| GAATCAACCGATTCCACTGA+CGG | 0.600361 | 5.2:+75929056 | None:intergenic |
| TTTGCAGGCTCGCTATTCAG+AGG | 0.604060 | 5.2:-75928865 | MS.gene47747:intron |
| TTGGCTGGTCAACTCCATGA+TGG | 0.613547 | 5.2:+75926980 | None:intergenic |
| GGACAGATTTCCAATTCACG+TGG | 0.614074 | 5.2:-75928464 | MS.gene47747:CDS |
| TCACAGGTAAATGGTTGCCA+GGG | 0.614783 | 5.2:+75929676 | None:intergenic |
| GCGGCAGTCTGCAGACGTTG+AGG | 0.615573 | 5.2:-75933011 | MS.gene47747:CDS |
| AGTACCCTTCCACAGAGAGG+TGG | 0.615623 | 5.2:-75934680 | MS.gene47747:CDS |
| TCTGATTGGAGAAATATCAA+AGG | 0.616260 | 5.2:-75927638 | MS.gene47747:CDS |
| TTGACTTAAACAATTCAGGA+AGG | 0.617215 | 5.2:-75934631 | MS.gene47747:intron |
| CACTTGAAGATATTGACGGA+GGG | 0.617722 | 5.2:-75934041 | MS.gene47747:CDS |
| TACCCTTCCACAGAGAGGTG+GGG | 0.621352 | 5.2:-75934678 | MS.gene47747:CDS |
| TCTGCTGCCCTTGAAGTGGA+AGG | 0.630019 | 5.2:+75927473 | None:intergenic |
| AGCATGTCTGTAGATGAGCT+TGG | 0.639210 | 5.2:-75927518 | MS.gene47747:CDS |
| GGAAAATTAAGTGAAAGTAG+TGG | 0.642200 | 5.2:-75930386 | MS.gene47747:CDS |
| GCATGAAGCTGGAACTGGAG+AGG | 0.644232 | 5.2:+75932460 | None:intergenic |
| GTTCATATTCTTGAACTCTG+CGG | 0.646798 | 5.2:+75932981 | None:intergenic |
| GCCCTTGTTATGGGACACAA+TGG | 0.652712 | 5.2:-75934371 | MS.gene47747:CDS |
| GTAATCATGAAAGGAAACAA+AGG | 0.653527 | 5.2:-75928037 | MS.gene47747:CDS |
| TCCATTGTGTCCCATAACAA+GGG | 0.660482 | 5.2:+75934370 | None:intergenic |
| AATGTTGAAGATGCTACAGA+CGG | 0.662960 | 5.2:+75927130 | None:intergenic |
| CTAAAGTTGAAGGAATATTG+CGG | 0.670990 | 5.2:-75933030 | MS.gene47747:CDS |
| AGCTGGAGAATGTGAGCTGG+AGG | 0.672550 | 5.2:-75930783 | MS.gene47747:CDS |
| GCACTTGAAGATATTGACGG+AGG | 0.677854 | 5.2:-75934042 | MS.gene47747:CDS |
| ACAACCGGTAAAGCTAGTAG+TGG | 0.679296 | 5.2:-75929624 | MS.gene47747:CDS |
| ACTAAGCGGTCAACATTCTG+GGG | 0.682653 | 5.2:-75929588 | MS.gene47747:CDS |
| TCACATTCTCCAGCTAACAG+AGG | 0.688971 | 5.2:+75930791 | None:intergenic |
| GGGGAAGTAAACATGACACT+GGG | 0.689033 | 5.2:-75934659 | MS.gene47747:CDS |
| GACAGATTTCCAATTCACGT+GGG | 0.690788 | 5.2:-75928463 | MS.gene47747:CDS |
| ACAAGAAATTGATCGCAAGG+AGG | 0.690891 | 5.2:-75931078 | MS.gene47747:intron |
| TAGAGTACCCTTCCACAGAG+AGG | 0.699468 | 5.2:-75934683 | MS.gene47747:CDS |
| GAAGTAAACATGACACTGGG+CGG | 0.701017 | 5.2:-75934656 | MS.gene47747:CDS |
| TGAAAGGAAACAAAGGACCG+AGG | 0.709690 | 5.2:-75928030 | MS.gene47747:intron |
| AGAGTTCAAGAATATGAACA+AGG | 0.711542 | 5.2:-75932977 | MS.gene47747:intron |
| GCACAAGCTTTAGTACTAAG+CGG | 0.720132 | 5.2:-75929602 | MS.gene47747:CDS |
| TATGGTTCAGTTACAGACGT+AGG | 0.726061 | 5.2:-75928235 | MS.gene47747:CDS |
| GATTCTCGAGTTGAAAACAG+CGG | 0.735165 | 5.2:-75930521 | MS.gene47747:CDS |
| GATGCTGATCGTGTTCACAG+TGG | 0.764138 | 5.2:-75930407 | MS.gene47747:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 75926988 | 75935256 | 75926988 | ID=MS.gene47747 |
| chr5.2 | mRNA | 75926988 | 75935256 | 75926988 | ID=MS.gene47747.t1;Parent=MS.gene47747 |
| chr5.2 | exon | 75935180 | 75935256 | 75935180 | ID=MS.gene47747.t1.exon1;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75935180 | 75935256 | 75935180 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75934632 | 75934702 | 75934632 | ID=MS.gene47747.t1.exon2;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75934632 | 75934702 | 75934632 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75934466 | 75934544 | 75934466 | ID=MS.gene47747.t1.exon3;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75934466 | 75934544 | 75934466 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75934321 | 75934432 | 75934321 | ID=MS.gene47747.t1.exon4;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75934321 | 75934432 | 75934321 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75933998 | 75934117 | 75933998 | ID=MS.gene47747.t1.exon5;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75933998 | 75934117 | 75933998 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75932978 | 75933055 | 75932978 | ID=MS.gene47747.t1.exon6;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75932978 | 75933055 | 75932978 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75932593 | 75932648 | 75932593 | ID=MS.gene47747.t1.exon7;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75932593 | 75932648 | 75932593 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75932435 | 75932504 | 75932435 | ID=MS.gene47747.t1.exon8;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75932435 | 75932504 | 75932435 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75931008 | 75931095 | 75931008 | ID=MS.gene47747.t1.exon9;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75931008 | 75931095 | 75931008 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75930667 | 75930910 | 75930667 | ID=MS.gene47747.t1.exon10;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75930667 | 75930910 | 75930667 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75930355 | 75930576 | 75930355 | ID=MS.gene47747.t1.exon11;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75930355 | 75930576 | 75930355 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75929578 | 75929913 | 75929578 | ID=MS.gene47747.t1.exon12;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75929578 | 75929913 | 75929578 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75929041 | 75929090 | 75929041 | ID=MS.gene47747.t1.exon13;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75929041 | 75929090 | 75929041 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75928820 | 75928880 | 75928820 | ID=MS.gene47747.t1.exon14;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75928820 | 75928880 | 75928820 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75928649 | 75928732 | 75928649 | ID=MS.gene47747.t1.exon15;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75928649 | 75928732 | 75928649 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75928451 | 75928564 | 75928451 | ID=MS.gene47747.t1.exon16;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75928451 | 75928564 | 75928451 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75928199 | 75928365 | 75928199 | ID=MS.gene47747.t1.exon17;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75928199 | 75928365 | 75928199 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75928031 | 75928100 | 75928031 | ID=MS.gene47747.t1.exon18;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75928031 | 75928100 | 75928031 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75927472 | 75927675 | 75927472 | ID=MS.gene47747.t1.exon19;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75927472 | 75927675 | 75927472 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| chr5.2 | exon | 75926988 | 75927176 | 75926988 | ID=MS.gene47747.t1.exon20;Parent=MS.gene47747.t1 |
| chr5.2 | CDS | 75926988 | 75927176 | 75926988 | ID=cds.MS.gene47747.t1;Parent=MS.gene47747.t1 |
| Gene Sequence |
| Protein sequence |
