Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47832.t1 | XP_003604651.1 | 78.9 | 521 | 42 | 5 | 6 | 459 | 1 | 520 | 3.20E-215 | 757.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47832.t1 | G7JN22 | 78.9 | 521 | 42 | 5 | 6 | 459 | 1 | 520 | 2.3e-215 | 757.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049435 | MS.gene47832 | 0.808306 | 3.31E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene47832 | 0.805947 | 1.04E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene47832 | 0.803092 | 4.11E-49 | -1.69E-46 |
| MS.gene050680 | MS.gene47832 | 0.804327 | 2.28E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene47832 | 0.803423 | 3.51E-49 | -1.69E-46 |
| MS.gene051800 | MS.gene47832 | 0.808111 | 3.64E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene47832 | 0.833936 | 4.01E-56 | -1.69E-46 |
| MS.gene052333 | MS.gene47832 | 0.813594 | 2.37E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene47832 | 0.809019 | 2.33E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene47832 | 0.809385 | 1.94E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene47832 | 0.824509 | 7.77E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene47832 | 0.821911 | 3.14E-53 | -1.69E-46 |
| MS.gene053967 | MS.gene47832 | 0.803705 | 3.07E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene47832 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene47832 | -0.854141 | 1.50E-61 | -1.69E-46 |
| MS.gene054467 | MS.gene47832 | 0.831858 | 1.31E-55 | -1.69E-46 |
| MS.gene054468 | MS.gene47832 | 0.822894 | 1.86E-53 | -1.69E-46 |
| MS.gene054581 | MS.gene47832 | 0.803501 | 3.38E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene47832 | 0.804558 | 2.04E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene47832 | 0.818153 | 2.27E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene47832 | 0.831075 | 2.05E-55 | -1.69E-46 |
| MS.gene055926 | MS.gene47832 | 0.818799 | 1.62E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene47832 | 0.830186 | 3.38E-55 | -1.69E-46 |
| MS.gene057598 | MS.gene47832 | 0.829245 | 5.73E-55 | -1.69E-46 |
| MS.gene058625 | MS.gene47832 | 0.81183 | 5.75E-51 | -1.69E-46 |
| MS.gene058829 | MS.gene47832 | 0.830927 | 2.23E-55 | -1.69E-46 |
| MS.gene060011 | MS.gene47832 | 0.803132 | 4.03E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene47832 | 0.802522 | 5.39E-49 | -1.69E-46 |
| MS.gene060553 | MS.gene47832 | 0.811919 | 5.50E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 93 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTTTCTAACAAAATT+TGG | 0.138936 | 4.3:-82936927 | MS.gene47832:CDS |
| ATGATCCTAAACTTGGTTTA+TGG | 0.208760 | 4.3:-82939872 | MS.gene47832:CDS |
| GAAAAGAAGGTGATATTATT+TGG | 0.215755 | 4.3:-82939342 | MS.gene47832:CDS |
| TGTTCATAGTTTCCCATGTT+TGG | 0.263305 | 4.3:+82939296 | None:intergenic |
| TTAGATTCTTCTTCCATTGT+TGG | 0.308755 | 4.3:+82937011 | None:intergenic |
| CGCAAGGCATTACCATGAAT+TGG | 0.309591 | 4.3:+82936981 | None:intergenic |
| CGCAAGGCATTACCATGAAT+TGG | 0.309591 | 4.3:+82937655 | None:intergenic |
| CTATACAAGTTGATACTAAA+AGG | 0.314326 | 4.3:-82939364 | MS.gene47832:CDS |
| CTACTAAAAGATTGCGACTT+TGG | 0.316881 | 4.3:-82939918 | MS.gene47832:CDS |
| GGAGAACAGTTTCTAATAGT+TGG | 0.352666 | 4.3:-82939897 | MS.gene47832:CDS |
| AATAATTGTTCTTGAGGATT+GGG | 0.356549 | 4.3:-82939272 | MS.gene47832:CDS |
| GGGTTCCATAAACCAAGTTT+AGG | 0.360824 | 4.3:+82939867 | None:intergenic |
| GCTATGTTTGCCGAAAATAT+AGG | 0.378453 | 4.3:-82939163 | MS.gene47832:CDS |
| AGAACCGGAGGTTCTTCATT+TGG | 0.386077 | 4.3:+82939202 | None:intergenic |
| AACATAGCCATTGGCTTCTC+TGG | 0.387237 | 4.3:+82939178 | None:intergenic |
| GATCCTAGCTTATGAACTAT+AGG | 0.387560 | 4.3:+82941049 | None:intergenic |
| GCATGAAGAACAGTTTCATT+TGG | 0.387821 | 4.3:-82937710 | MS.gene47832:CDS |
| CATGGTCTGATGGTCATATA+TGG | 0.388044 | 4.3:-82939824 | MS.gene47832:CDS |
| AGGTGATATTATTTGGCAAC+CGG | 0.392152 | 4.3:-82939335 | MS.gene47832:CDS |
| ACATGAAGAGCAGTTTCATT+TGG | 0.393105 | 4.3:-82937036 | MS.gene47832:CDS |
| GGAAAGAGTGAAACAAGAAA+AGG | 0.394035 | 4.3:+82940988 | None:intergenic |
| GAATAATTGTTCTTGAGGAT+TGG | 0.398780 | 4.3:-82939273 | MS.gene47832:CDS |
| TGCAGTGCCATCTGAACAAC+AGG | 0.413359 | 4.3:-82940891 | MS.gene47832:intron |
| GTCAATGGTAATGCATCTAA+AGG | 0.413839 | 4.3:+82939846 | None:intergenic |
| TCTAACTCAGAGCCAATTCA+TGG | 0.434464 | 4.3:-82936993 | MS.gene47832:CDS |
| GGAGGTCCTGTTCTTGTACC+TGG | 0.437575 | 4.3:-82938983 | MS.gene47832:CDS |
| GAAAGAGTGAAACAAGAAAA+GGG | 0.442955 | 4.3:+82940989 | None:intergenic |
| GTTGGAGATGATCCTAAACT+TGG | 0.469158 | 4.3:-82939879 | MS.gene47832:CDS |
| TTCTGATCCTGAGTTTCAAA+AGG | 0.469360 | 4.3:+82938878 | None:intergenic |
| ATTAAGCCAGGTACAAGAAC+AGG | 0.470486 | 4.3:+82938977 | None:intergenic |
| ATTGGCTTCTCTGGTAGAAC+CGG | 0.470881 | 4.3:+82939187 | None:intergenic |
| TCTTCTTCAACAACTTCACT+TGG | 0.473052 | 4.3:+82938929 | None:intergenic |
| CTTAGAACTAAAACTTGTGA+AGG | 0.476857 | 4.3:+82941072 | None:intergenic |
| CTTGCGAAATGACATCGAAT+GGG | 0.481388 | 4.3:-82936964 | MS.gene47832:CDS |
| GAACAGAATAATTGTTCTTG+AGG | 0.486338 | 4.3:-82939278 | MS.gene47832:CDS |
| TCAAACTCAGAGCCAATTCA+TGG | 0.486763 | 4.3:-82937667 | MS.gene47832:CDS |
| CCTTGCGAAATGACATCGAA+TGG | 0.498463 | 4.3:-82936965 | MS.gene47832:CDS |
| GAAACTTCTTTACCGTTTCG+CGG | 0.499901 | 4.3:+82936940 | None:intergenic |
| CATCGAATGGGGCCGCGAAA+CGG | 0.503895 | 4.3:-82936952 | MS.gene47832:CDS |
| CTTGAAACATGTACAAAACA+AGG | 0.506329 | 4.3:-82940930 | MS.gene47832:CDS |
| ATCATGTGTTCAGGATATGC+TGG | 0.508543 | 4.3:-82939401 | MS.gene47832:intron |
| GTACTTGTACTTATCTCTTG+TGG | 0.509169 | 4.3:+82937083 | None:intergenic |
| TCAATGGTAATGCATCTAAA+GGG | 0.510357 | 4.3:+82939847 | None:intergenic |
| TTACCGTTTCGAAGCCCCAC+TGG | 0.512596 | 4.3:+82937623 | None:intergenic |
| TGCCGAAAATATAGGTTCCT+CGG | 0.514374 | 4.3:-82939155 | MS.gene47832:CDS |
| TTGATACTAAAAGGAAAAGA+AGG | 0.516269 | 4.3:-82939355 | MS.gene47832:CDS |
| TTGGCATCAACAATGGAAGA+AGG | 0.534614 | 4.3:-82937691 | MS.gene47832:CDS |
| CATCCAGTGGGGCTTCGAAA+CGG | 0.535005 | 4.3:-82937626 | MS.gene47832:intron |
| TCAACCAAATGAAGAACCTC+CGG | 0.536881 | 4.3:-82939206 | MS.gene47832:CDS |
| TATTATTTGGCAACCGGGGT+CGG | 0.540226 | 4.3:-82939329 | MS.gene47832:CDS |
| TCAGTCAACGGTATTAAGCC+AGG | 0.540479 | 4.3:+82938965 | None:intergenic |
| AAATAAACCTGTTGTTCAGA+TGG | 0.543697 | 4.3:+82940884 | None:intergenic |
| TGTTCGCTTTGTTGAACTTG+AGG | 0.544102 | 4.3:+82940070 | None:intergenic |
| CGGATCGAGTAATCCAAACA+TGG | 0.544820 | 4.3:-82939309 | MS.gene47832:CDS |
| CAGATGGCACTGCATGCAAA+GGG | 0.546614 | 4.3:+82940900 | None:intergenic |
| AGAACTTCAGAAAATAATAG+AGG | 0.549395 | 4.3:-82939242 | MS.gene47832:CDS |
| CCATTCGATGTCATTTCGCA+AGG | 0.550670 | 4.3:+82936965 | None:intergenic |
| AAGCCTATAGTTCATAAGCT+AGG | 0.553146 | 4.3:-82941052 | MS.gene47832:CDS |
| GTTTCAAAAGGTTCAACTGA+TGG | 0.554167 | 4.3:+82938890 | None:intergenic |
| AAGAGTGAAGAATCTGAAGA+TGG | 0.555921 | 4.3:-82939079 | MS.gene47832:CDS |
| TGGATTACTCGATCCGACCC+CGG | 0.556713 | 4.3:+82939316 | None:intergenic |
| TGACCATCAGACCATGTCAA+TGG | 0.564403 | 4.3:+82939831 | None:intergenic |
| GTTTCATTTGGCATCAACAA+TGG | 0.568666 | 4.3:-82937698 | MS.gene47832:CDS |
| TCAGATGGCACTGCATGCAA+AGG | 0.568931 | 4.3:+82940899 | None:intergenic |
| GGCTTCTCTGGTAGAACCGG+AGG | 0.575456 | 4.3:+82939190 | None:intergenic |
| TCATATATGGACTGTTGAGC+TGG | 0.575955 | 4.3:-82939811 | MS.gene47832:intron |
| GTTTCATTTGGCACCAACAA+TGG | 0.578517 | 4.3:-82937024 | MS.gene47832:CDS |
| CCAGCTTCTTCTTCAGTCAA+CGG | 0.590556 | 4.3:+82938953 | None:intergenic |
| TGTGTTCAGGATATGCTGGC+TGG | 0.594337 | 4.3:-82939397 | MS.gene47832:intron |
| CCACTGGATGTCATTTCGCA+AGG | 0.596297 | 4.3:+82937639 | None:intergenic |
| TGGCATCAACAATGGAAGAA+GGG | 0.602203 | 4.3:-82937690 | MS.gene47832:CDS |
| TGAAAATGTTCAGTTGAGCA+AGG | 0.604858 | 4.3:-82937129 | MS.gene47832:intron |
| TAGATGCATTACCATTGACA+TGG | 0.613812 | 4.3:-82939842 | MS.gene47832:CDS |
| CCTTGCGAAATGACATCCAG+TGG | 0.615325 | 4.3:-82937639 | MS.gene47832:CDS |
| GGTGATATTATTTGGCAACC+GGG | 0.626598 | 4.3:-82939334 | MS.gene47832:CDS |
| TGAAAATGCTCAGTTAAGCA+AGG | 0.630052 | 4.3:-82937797 | MS.gene47832:intron |
| ACTTCAGAAAATAATAGAGG+AGG | 0.634094 | 4.3:-82939239 | MS.gene47832:CDS |
| TTACCATTGACATGGTCTGA+TGG | 0.637869 | 4.3:-82939834 | MS.gene47832:CDS |
| CTTGCGAAATGACATCCAGT+GGG | 0.638788 | 4.3:-82937638 | MS.gene47832:CDS |
| GAAACATGAAAAGCAACACT+AGG | 0.641404 | 4.3:+82941019 | None:intergenic |
| TTGCGAAATGACATCGAATG+GGG | 0.646134 | 4.3:-82936963 | MS.gene47832:CDS |
| TTGAAACATGTACAAAACAA+GGG | 0.648807 | 4.3:-82940929 | MS.gene47832:CDS |
| GGTTCTACCAGAGAAGCCAA+TGG | 0.652910 | 4.3:-82939185 | MS.gene47832:CDS |
| CCGTTGACTGAAGAAGAAGC+TGG | 0.654789 | 4.3:-82938953 | MS.gene47832:CDS |
| GTGATATTATTTGGCAACCG+GGG | 0.662994 | 4.3:-82939333 | MS.gene47832:CDS |
| TTCAACTGATGGCTCTACCA+CGG | 0.664103 | 4.3:+82938901 | None:intergenic |
| GGATCGAGTAATCCAAACAT+GGG | 0.665164 | 4.3:-82939308 | MS.gene47832:CDS |
| ACTTTCTGTGAGATCCTCCG+AGG | 0.674643 | 4.3:+82939138 | None:intergenic |
| CGAAAATATAGGTTCCTCGG+AGG | 0.707768 | 4.3:-82939152 | MS.gene47832:CDS |
| TCAGGATCAGAATATACCAG+AGG | 0.719056 | 4.3:-82938867 | MS.gene47832:intron |
| TGTTGAAGAAGAAAAGACCG+TGG | 0.738151 | 4.3:-82938918 | MS.gene47832:CDS |
| TTGCGAAATGACATCCAGTG+GGG | 0.750769 | 4.3:-82937637 | MS.gene47832:CDS |
| TTAGTAGCTGAAACTCAACA+CGG | 0.751100 | 4.3:+82939934 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTGAATTTGATAAAT+GGG | - | chr4.3:82937183-82937202 | MS.gene47832:intron | 10.0% |
| !! | AAAAACAAAAGTTTCTTAAA+AGG | + | chr4.3:82937455-82937474 | None:intergenic | 15.0% |
| !! | AAAACAAAAGTTTCTTAAAA+GGG | + | chr4.3:82937454-82937473 | None:intergenic | 15.0% |
| !! | ACATATGAGTAAAAATTAAT+TGG | - | chr4.3:82937605-82937624 | MS.gene47832:intron | 15.0% |
| !! | ATAAAATGAGAAAATTTGTA+TGG | + | chr4.3:82939959-82939978 | None:intergenic | 15.0% |
| !! | ATTAATGATAACAATCAATT+TGG | + | chr4.3:82939425-82939444 | None:intergenic | 15.0% |
| !! | GATTGTTATATATACATTAA+GGG | - | chr4.3:82937674-82937693 | MS.gene47832:CDS | 15.0% |
| !! | TCTTAATTTCAAAGATTTAA+CGG | + | chr4.3:82938474-82938493 | None:intergenic | 15.0% |
| !! | TGATTGTTATATATACATTA+AGG | - | chr4.3:82937673-82937692 | MS.gene47832:CDS | 15.0% |
| !! | TTGGAAACAAAATAAAAAAA+AGG | + | chr4.3:82938328-82938347 | None:intergenic | 15.0% |
| !!! | AACACACAAATTAAAATTTT+AGG | + | chr4.3:82938036-82938055 | None:intergenic | 15.0% |
| !!! | ACACACAAATTAAAATTTTA+GGG | + | chr4.3:82938035-82938054 | None:intergenic | 15.0% |
| !!! | CTTTATTTGAATTTGATAAA+TGG | - | chr4.3:82937182-82937201 | MS.gene47832:intron | 15.0% |
| !!! | GATTTTAATGTTATACTTTT+TGG | - | chr4.3:82937358-82937377 | MS.gene47832:intron | 15.0% |
| !!! | TCATTGCTTTAAATAATTAA+TGG | + | chr4.3:82940774-82940793 | None:intergenic | 15.0% |
| !!! | TGTTTTTGATTTTTTGTTTT+TGG | - | chr4.3:82937468-82937487 | MS.gene47832:intron | 15.0% |
| !!! | TTGCACATTTTTTTAATATA+TGG | - | chr4.3:82940126-82940145 | MS.gene47832:intron | 15.0% |
| !! | AAAAGAGAATAACTTCAAAT+AGG | + | chr4.3:82937514-82937533 | None:intergenic | 20.0% |
| !! | AAGAAGTTTCTAACAAAATT+TGG | - | chr4.3:82941085-82941104 | MS.gene47832:CDS | 20.0% |
| !! | AAGAGTTCTTGTAAATAAAA+CGG | + | chr4.3:82940643-82940662 | None:intergenic | 20.0% |
| !! | AATAACTTCAAATAGGAAAA+AGG | + | chr4.3:82937507-82937526 | None:intergenic | 20.0% |
| !! | ATAACTTCAAATAGGAAAAA+GGG | + | chr4.3:82937506-82937525 | None:intergenic | 20.0% |
| !! | CAAATCATTAAGATATTGTT+TGG | - | chr4.3:82938239-82938258 | MS.gene47832:intron | 20.0% |
| !! | CAGCGTTAAAAAATAAAAAA+GGG | - | chr4.3:82938973-82938992 | MS.gene47832:CDS | 20.0% |
| !! | GTTGTAGTTATTTATTTGTT+TGG | - | chr4.3:82937205-82937224 | MS.gene47832:intron | 20.0% |
| !! | TCAAATAAAGAACACAAATT+GGG | + | chr4.3:82937172-82937191 | None:intergenic | 20.0% |
| !! | TTCAAATAAAGAACACAAAT+TGG | + | chr4.3:82937173-82937192 | None:intergenic | 20.0% |
| !!! | AAATAAATTGTGTGTTGTTA+TGG | + | chr4.3:82939561-82939580 | None:intergenic | 20.0% |
| !!! | ATATAATTTTAGTGCTTGTT+TGG | + | chr4.3:82939921-82939940 | None:intergenic | 20.0% |
| ! | AAAAAAAGATGTCCAAAATC+TGG | + | chr4.3:82940529-82940548 | None:intergenic | 25.0% |
| ! | AAAAAAGATGTCCAAAATCT+GGG | + | chr4.3:82940528-82940547 | None:intergenic | 25.0% |
| ! | AACAAACAAGTATGTTCTAA+TGG | - | chr4.3:82937961-82937980 | MS.gene47832:intron | 25.0% |
| ! | AAGATGTTTAAGTGAACTAA+TGG | - | chr4.3:82937746-82937765 | MS.gene47832:CDS | 25.0% |
| ! | AATAATTGTTCTTGAGGATT+GGG | - | chr4.3:82938740-82938759 | MS.gene47832:intron | 25.0% |
| ! | AGAACTTCAGAAAATAATAG+AGG | - | chr4.3:82938770-82938789 | MS.gene47832:intron | 25.0% |
| ! | AGAGTTCTTGTAAATAAAAC+GGG | + | chr4.3:82940642-82940661 | None:intergenic | 25.0% |
| ! | ATATACATTAAGGGTCTATT+TGG | - | chr4.3:82937683-82937702 | MS.gene47832:CDS | 25.0% |
| ! | ATCAGATATATTCTAGTCAA+TGG | + | chr4.3:82940668-82940687 | None:intergenic | 25.0% |
| ! | ATGATGATACAAACAAAACA+AGG | + | chr4.3:82939287-82939306 | None:intergenic | 25.0% |
| ! | ATGTTTCAAGAGACAAAAAA+TGG | + | chr4.3:82937072-82937091 | None:intergenic | 25.0% |
| ! | CAAATAAAGAACACAAATTG+GGG | + | chr4.3:82937171-82937190 | None:intergenic | 25.0% |
| ! | CATCATAGATTAAAACCAAA+AGG | + | chr4.3:82937273-82937292 | None:intergenic | 25.0% |
| ! | GAAAAGAAGGTGATATTATT+TGG | - | chr4.3:82938670-82938689 | MS.gene47832:intron | 25.0% |
| ! | GATTATATATGTACGAAACA+AGG | + | chr4.3:82939363-82939382 | None:intergenic | 25.0% |
| ! | GCAGCGTTAAAAAATAAAAA+AGG | - | chr4.3:82938972-82938991 | MS.gene47832:CDS | 25.0% |
| ! | GTATTTATGTAGAATTCAAG+AGG | - | chr4.3:82937582-82937601 | MS.gene47832:intron | 25.0% |
| ! | TAACTTCAAATAGGAAAAAG+GGG | + | chr4.3:82937505-82937524 | None:intergenic | 25.0% |
| ! | TATAAACAACCACTACATAA+CGG | + | chr4.3:82938585-82938604 | None:intergenic | 25.0% |
| ! | TATATAATCAATGCATCTTG+AGG | - | chr4.3:82939374-82939393 | MS.gene47832:CDS | 25.0% |
| ! | TTGAAACATGTACAAAACAA+GGG | - | chr4.3:82937083-82937102 | MS.gene47832:CDS | 25.0% |
| ! | TTGATACTAAAAGGAAAAGA+AGG | - | chr4.3:82938657-82938676 | MS.gene47832:intron | 25.0% |
| !! | ATATTTTTCATCATGTGTTC+AGG | - | chr4.3:82938602-82938621 | MS.gene47832:intron | 25.0% |
| !! | CTTTTAGTATCAACTTGTAT+AGG | + | chr4.3:82938650-82938669 | None:intergenic | 25.0% |
| !! | TTGTTCTGCATAAATTTTAC+AGG | - | chr4.3:82937896-82937915 | MS.gene47832:intron | 25.0% |
| !! | TTTGGTCGAAAACATTTTTA+AGG | - | chr4.3:82938257-82938276 | MS.gene47832:intron | 25.0% |
| !!! | ACATTGGTTTAAATGATTAC+TGG | + | chr4.3:82940100-82940119 | None:intergenic | 25.0% |
| !!! | ACTTTTTTGTTCATTTCTGA+AGG | + | chr4.3:82937048-82937067 | None:intergenic | 25.0% |
| !!! | CTATACAAGTTGATACTAAA+AGG | - | chr4.3:82938648-82938667 | MS.gene47832:intron | 25.0% |
| !!! | GGTTTTAATAAAAAGGTTTG+CGG | + | chr4.3:82939736-82939755 | None:intergenic | 25.0% |
| !!! | GTTTGTTAAGTTTTTGTAAC+AGG | + | chr4.3:82939766-82939785 | None:intergenic | 25.0% |
| !!! | TATTTTAATCTGAAACAAGC+TGG | - | chr4.3:82939576-82939595 | MS.gene47832:intron | 25.0% |
| !!! | TTTTTATTTTTTAACGCTGC+AGG | + | chr4.3:82938972-82938991 | None:intergenic | 25.0% |
| AAATAAAAAAGGGACGATTG+TGG | - | chr4.3:82938983-82939002 | MS.gene47832:CDS | 30.0% | |
| AAATAAACCTGTTGTTCAGA+TGG | + | chr4.3:82937131-82937150 | None:intergenic | 30.0% | |
| AAATGTGCAAGTTTACACAT+TGG | + | chr4.3:82940116-82940135 | None:intergenic | 30.0% | |
| ACTTCAGAAAATAATAGAGG+AGG | - | chr4.3:82938773-82938792 | MS.gene47832:intron | 30.0% | |
| ATGATCCTAAACTTGGTTTA+TGG | - | chr4.3:82938140-82938159 | MS.gene47832:intron | 30.0% | |
| CACTTAGAGAAGAACTAATT+AGG | - | chr4.3:82939246-82939265 | MS.gene47832:CDS | 30.0% | |
| CGGAATCAAACAATTTGAAA+AGG | + | chr4.3:82939195-82939214 | None:intergenic | 30.0% | |
| CTTAGAACTAAAACTTGTGA+AGG | + | chr4.3:82936943-82936962 | None:intergenic | 30.0% | |
| CTTCTGATGAAAAAACAACA+GGG | - | chr4.3:82940036-82940055 | MS.gene47832:intron | 30.0% | |
| CTTGAAACATGTACAAAACA+AGG | - | chr4.3:82937082-82937101 | MS.gene47832:CDS | 30.0% | |
| GAAAGAGTGAAACAAGAAAA+GGG | + | chr4.3:82937026-82937045 | None:intergenic | 30.0% | |
| GAACAGAATAATTGTTCTTG+AGG | - | chr4.3:82938734-82938753 | MS.gene47832:intron | 30.0% | |
| GAATAATTGTTCTTGAGGAT+TGG | - | chr4.3:82938739-82938758 | MS.gene47832:intron | 30.0% | |
| GAGTTCTTGTAAATAAAACG+GGG | + | chr4.3:82940641-82940660 | None:intergenic | 30.0% | |
| TCAAACAATTTGAAAAGGAG+CGG | + | chr4.3:82939190-82939209 | None:intergenic | 30.0% | |
| TTAGATTCTTCTTCCATTGT+TGG | + | chr4.3:82941004-82941023 | None:intergenic | 30.0% | |
| ! | ACGCAAAAATAGCTTGATTT+TGG | - | chr4.3:82937854-82937873 | MS.gene47832:intron | 30.0% |
| ! | CGTTTCTTTAAAAGCTCATT+CGG | - | chr4.3:82939213-82939232 | MS.gene47832:CDS | 30.0% |
| ! | CTAATTAGTTCTTCTCTAAG+TGG | + | chr4.3:82939248-82939267 | None:intergenic | 30.0% |
| ! | GTTTCTTTAAAAGCTCATTC+GGG | - | chr4.3:82939214-82939233 | MS.gene47832:CDS | 30.0% |
| ! | TCAATGGTAATGCATCTAAA+GGG | + | chr4.3:82938168-82938187 | None:intergenic | 30.0% |
| ! | TTCTGCATAAATTTTACAGG+AGG | - | chr4.3:82937899-82937918 | MS.gene47832:intron | 30.0% |
| !! | ATTTTAGTGCTTGTTTGGAT+TGG | + | chr4.3:82939916-82939935 | None:intergenic | 30.0% |
| !! | CGAATGAGCTTTTAAAGAAA+CGG | + | chr4.3:82939215-82939234 | None:intergenic | 30.0% |
| !! | TCTGCAGGGTTTTAATAAAA+AGG | + | chr4.3:82939743-82939762 | None:intergenic | 30.0% |
| !! | TTTGTTCTTTGTTGTTGAAG+TGG | + | chr4.3:82937419-82937438 | None:intergenic | 30.0% |
| !!! | ATTGGTTTTTCTGTGTTTAG+TGG | - | chr4.3:82937623-82937642 | MS.gene47832:intron | 30.0% |
| !!! | GATTGTTTTGATGTCAAATG+TGG | - | chr4.3:82940433-82940452 | MS.gene47832:intron | 30.0% |
| AAAGGTGAAAACAACGTAAC+TGG | + | chr4.3:82938310-82938329 | None:intergenic | 35.0% | |
| AACCAAAAGGAACAAACTCA+TGG | + | chr4.3:82937260-82937279 | None:intergenic | 35.0% | |
| AAGAGTGAAGAATCTGAAGA+TGG | - | chr4.3:82938933-82938952 | MS.gene47832:CDS | 35.0% | |
| AAGCCTATAGTTCATAAGCT+AGG | - | chr4.3:82936960-82936979 | MS.gene47832:CDS | 35.0% | |
| ACATGAAGAGCAGTTTCATT+TGG | - | chr4.3:82940976-82940995 | MS.gene47832:CDS | 35.0% | |
| AGACACTTAGTAATGCTAGA+TGG | + | chr4.3:82939792-82939811 | None:intergenic | 35.0% | |
| AGCATTACTAAGTGTCTGTT+TGG | - | chr4.3:82939795-82939814 | MS.gene47832:intron | 35.0% | |
| AGGTGATATTATTTGGCAAC+CGG | - | chr4.3:82938677-82938696 | MS.gene47832:intron | 35.0% | |
| ATTCAACAGCCAAAAGTTCA+TGG | + | chr4.3:82939530-82939549 | None:intergenic | 35.0% | |
| CTACTAAAAGATTGCGACTT+TGG | - | chr4.3:82938094-82938113 | MS.gene47832:intron | 35.0% | |
| GAAACATGAAAAGCAACACT+AGG | + | chr4.3:82936996-82937015 | None:intergenic | 35.0% | |
| GAGTGAAAGTTGTTAAGAAG+TGG | - | chr4.3:82937645-82937664 | MS.gene47832:CDS | 35.0% | |
| GATCCTAGCTTATGAACTAT+AGG | + | chr4.3:82936966-82936985 | None:intergenic | 35.0% | |
| GCATGAAGAACAGTTTCATT+TGG | - | chr4.3:82940302-82940321 | MS.gene47832:intron | 35.0% | |
| GCTATGTTTGCCGAAAATAT+AGG | - | chr4.3:82938849-82938868 | MS.gene47832:intron | 35.0% | |
| GCTTCTGATGAAAAAACAAC+AGG | - | chr4.3:82940035-82940054 | MS.gene47832:intron | 35.0% | |
| GGAAAGAGTGAAACAAGAAA+AGG | + | chr4.3:82937027-82937046 | None:intergenic | 35.0% | |
| GGAGAACAGTTTCTAATAGT+TGG | - | chr4.3:82938115-82938134 | MS.gene47832:intron | 35.0% | |
| GTACTTGTACTTATCTCTTG+TGG | + | chr4.3:82940932-82940951 | None:intergenic | 35.0% | |
| GTTATACTCCATCATTGACA+TGG | + | chr4.3:82937541-82937560 | None:intergenic | 35.0% | |
| GTTTCAAAAGGTTCAACTGA+TGG | + | chr4.3:82939125-82939144 | None:intergenic | 35.0% | |
| GTTTCATTTGGCATCAACAA+TGG | - | chr4.3:82940314-82940333 | MS.gene47832:intron | 35.0% | |
| TAGATGCATTACCATTGACA+TGG | - | chr4.3:82938170-82938189 | MS.gene47832:intron | 35.0% | |
| TCTTCTTCAACAACTTCACT+TGG | + | chr4.3:82939086-82939105 | None:intergenic | 35.0% | |
| TGAAAATGCTCAGTTAAGCA+AGG | - | chr4.3:82940215-82940234 | MS.gene47832:intron | 35.0% | |
| TGAAAATGTTCAGTTGAGCA+AGG | - | chr4.3:82940883-82940902 | MS.gene47832:intron | 35.0% | |
| TGTTCATAGTTTCCCATGTT+TGG | + | chr4.3:82938719-82938738 | None:intergenic | 35.0% | |
| TTAGTAGCTGAAACTCAACA+CGG | + | chr4.3:82938081-82938100 | None:intergenic | 35.0% | |
| TTCTGATCCTGAGTTTCAAA+AGG | + | chr4.3:82939137-82939156 | None:intergenic | 35.0% | |
| TTTAGGGATTTGAGTCCTAA+AGG | + | chr4.3:82938019-82938038 | None:intergenic | 35.0% | |
| ! | CTTAAAACTCTGGTTTCCAT+CGG | + | chr4.3:82938430-82938449 | None:intergenic | 35.0% |
| ! | GAGATGTTACCATGAACTTT+TGG | - | chr4.3:82939518-82939537 | MS.gene47832:intron | 35.0% |
| ! | GTCAATGGTAATGCATCTAA+AGG | + | chr4.3:82938169-82938188 | None:intergenic | 35.0% |
| ! | TTCACTTGTAGGCTTTAGTT+AGG | - | chr4.3:82940060-82940079 | MS.gene47832:intron | 35.0% |
| ! | TTTTCCATCCATGTCAATGA+TGG | - | chr4.3:82937530-82937549 | MS.gene47832:intron | 35.0% |
| !! | AAAGTCGATGCTAGTCTTAA+TGG | - | chr4.3:82940828-82940847 | MS.gene47832:intron | 35.0% |
| !! | AGCTTAATCGATTTTGAAGG+AGG | - | chr4.3:82939011-82939030 | MS.gene47832:CDS | 35.0% |
| !! | GGAAGCTTAATCGATTTTGA+AGG | - | chr4.3:82939008-82939027 | MS.gene47832:CDS | 35.0% |
| !! | TTCCATGAGTTTGTTCCTTT+TGG | - | chr4.3:82937255-82937274 | MS.gene47832:intron | 35.0% |
| !!! | AGTTGAACCTTTTGAAACTC+AGG | - | chr4.3:82939127-82939146 | MS.gene47832:CDS | 35.0% |
| !!! | CTCTTTTGGTCTTAAAACTC+TGG | + | chr4.3:82938440-82938459 | None:intergenic | 35.0% |
| AAAAAAGGGACGATTGTGGA+GGG | - | chr4.3:82938987-82939006 | MS.gene47832:CDS | 40.0% | |
| ACTTCCTGTGATATACCGTT+AGG | - | chr4.3:82940704-82940723 | MS.gene47832:intron | 40.0% | |
| AGTCACGATCCTTGATATTG+CGG | - | chr4.3:82939621-82939640 | MS.gene47832:intron | 40.0% | |
| ATCATGTGTTCAGGATATGC+TGG | - | chr4.3:82938611-82938630 | MS.gene47832:intron | 40.0% | |
| ATCTTGAGGCCAAAAGAAAG+GGG | - | chr4.3:82939388-82939407 | MS.gene47832:CDS | 40.0% | |
| ATTAAGCCAGGTACAAGAAC+AGG | + | chr4.3:82939038-82939057 | None:intergenic | 40.0% | |
| CATCTTGAGGCCAAAAGAAA+GGG | - | chr4.3:82939387-82939406 | MS.gene47832:CDS | 40.0% | |
| CATGGTCTGATGGTCATATA+TGG | - | chr4.3:82938188-82938207 | MS.gene47832:intron | 40.0% | |
| CGGTGAATTTGACACAATCA+TGG | + | chr4.3:82939893-82939912 | None:intergenic | 40.0% | |
| CTTCCTGTGATATACCGTTA+GGG | - | chr4.3:82940705-82940724 | MS.gene47832:intron | 40.0% | |
| CTTGCGAAATGACATCGAAT+GGG | - | chr4.3:82941048-82941067 | MS.gene47832:CDS | 40.0% | |
| GAAACTTCTTTACCGTTTCG+CGG | + | chr4.3:82941075-82941094 | None:intergenic | 40.0% | |
| GAGTCTTTGCAACAAGTCTA+GGG | + | chr4.3:82940556-82940575 | None:intergenic | 40.0% | |
| GATGTATGCAACCTCAATTG+TGG | - | chr4.3:82940458-82940477 | MS.gene47832:intron | 40.0% | |
| GGATCGAGTAATCCAAACAT+GGG | - | chr4.3:82938704-82938723 | MS.gene47832:intron | 40.0% | |
| GGGTTCCATAAACCAAGTTT+AGG | + | chr4.3:82938148-82938167 | None:intergenic | 40.0% | |
| GGTGATATTATTTGGCAACC+GGG | - | chr4.3:82938678-82938697 | MS.gene47832:intron | 40.0% | |
| GTGATATTATTTGGCAACCG+GGG | - | chr4.3:82938679-82938698 | MS.gene47832:intron | 40.0% | |
| GTTGGAGATGATCCTAAACT+TGG | - | chr4.3:82938133-82938152 | MS.gene47832:intron | 40.0% | |
| GTTTCATTTGGCACCAACAA+TGG | - | chr4.3:82940988-82941007 | MS.gene47832:CDS | 40.0% | |
| TAAAAAAGGGACGATTGTGG+AGG | - | chr4.3:82938986-82939005 | MS.gene47832:CDS | 40.0% | |
| TACTCCATCATTGACATGGA+TGG | + | chr4.3:82937537-82937556 | None:intergenic | 40.0% | |
| TCAAACTCAGAGCCAATTCA+TGG | - | chr4.3:82940345-82940364 | MS.gene47832:intron | 40.0% | |
| TCAACCAAATGAAGAACCTC+CGG | - | chr4.3:82938806-82938825 | MS.gene47832:intron | 40.0% | |
| TCAGGATCAGAATATACCAG+AGG | - | chr4.3:82939145-82939164 | MS.gene47832:CDS | 40.0% | |
| TCCAAAATGTTCTCGAAACC+TGG | - | chr4.3:82938343-82938362 | MS.gene47832:intron | 40.0% | |
| TCTAACTCAGAGCCAATTCA+TGG | - | chr4.3:82941019-82941038 | MS.gene47832:CDS | 40.0% | |
| TCTTCTGCATGTCTTCCTTT+AGG | - | chr4.3:82938001-82938020 | MS.gene47832:intron | 40.0% | |
| TGAGTCTTTGCAACAAGTCT+AGG | + | chr4.3:82940557-82940576 | None:intergenic | 40.0% | |
| TGCCGAAAATATAGGTTCCT+CGG | - | chr4.3:82938857-82938876 | MS.gene47832:intron | 40.0% | |
| TGGCATCAACAATGGAAGAA+GGG | - | chr4.3:82940322-82940341 | MS.gene47832:intron | 40.0% | |
| TGTTGAAGAAGAAAAGACCG+TGG | - | chr4.3:82939094-82939113 | MS.gene47832:CDS | 40.0% | |
| TTACCATTGACATGGTCTGA+TGG | - | chr4.3:82938178-82938197 | MS.gene47832:intron | 40.0% | |
| TTGCGAAATGACATCGAATG+GGG | - | chr4.3:82941049-82941068 | MS.gene47832:CDS | 40.0% | |
| TTGGCATCAACAATGGAAGA+AGG | - | chr4.3:82940321-82940340 | MS.gene47832:intron | 40.0% | |
| ! | AGTTTTTGTAACAGGTCTGC+AGG | + | chr4.3:82939758-82939777 | None:intergenic | 40.0% |
| ! | CGGTGAAAACAACACTCTTT+TGG | + | chr4.3:82938454-82938473 | None:intergenic | 40.0% |
| ! | CTCCGAGGAACCTATATTTT+CGG | + | chr4.3:82938862-82938881 | None:intergenic | 40.0% |
| ! | GCAATGTTTCCCCTTTCTTT+TGG | + | chr4.3:82939400-82939419 | None:intergenic | 40.0% |
| ! | GTTTTTGTAACAGGTCTGCA+GGG | + | chr4.3:82939757-82939776 | None:intergenic | 40.0% |
| ! | TCATATATGGACTGTTGAGC+TGG | - | chr4.3:82938201-82938220 | MS.gene47832:intron | 40.0% |
| ! | TGCGATTTTCCGCAATATCA+AGG | + | chr4.3:82939633-82939652 | None:intergenic | 40.0% |
| ! | TGTTCGCTTTGTTGAACTTG+AGG | + | chr4.3:82937945-82937964 | None:intergenic | 40.0% |
| ! | TTAGTGCTTGTTTGGATTGG+CGG | + | chr4.3:82939913-82939932 | None:intergenic | 40.0% |
| ! | TTTTCGGCAAACATAGCCAT+TGG | + | chr4.3:82938846-82938865 | None:intergenic | 40.0% |
| AAATGTTCTCGAAACCTGGC+TGG | - | chr4.3:82938347-82938366 | MS.gene47832:intron | 45.0% | |
| AACAACAGGGCTTCACTTGT+AGG | - | chr4.3:82940049-82940068 | MS.gene47832:intron | 45.0% | |
| AAGCCCTAACGGTATATCAC+AGG | + | chr4.3:82940711-82940730 | None:intergenic | 45.0% | |
| AATCTGGGCAGCAACATCAA+TGG | + | chr4.3:82940513-82940532 | None:intergenic | 45.0% | |
| AGAACCGGAGGTTCTTCATT+TGG | + | chr4.3:82938813-82938832 | None:intergenic | 45.0% | |
| AGTCTTTGCAACCACAACTG+AGG | + | chr4.3:82939680-82939699 | None:intergenic | 45.0% | |
| CCAGCTTCTTCTTCAGTCAA+CGG | + | chr4.3:82939062-82939081 | None:intergenic | 45.0% | |
| CCTTGCGAAATGACATCGAA+TGG | - | chr4.3:82941047-82941066 | MS.gene47832:CDS | 45.0% | |
| CGAAAATATAGGTTCCTCGG+AGG | - | chr4.3:82938860-82938879 | MS.gene47832:intron | 45.0% | |
| CGGATCGAGTAATCCAAACA+TGG | - | chr4.3:82938703-82938722 | MS.gene47832:intron | 45.0% | |
| CTAACTCAACCCTACAAAGC+TGG | + | chr4.3:82940736-82940755 | None:intergenic | 45.0% | |
| CTTGCGAAATGACATCCAGT+GGG | - | chr4.3:82940374-82940393 | MS.gene47832:intron | 45.0% | |
| GAAAGCAGACCGTTATGTAG+TGG | - | chr4.3:82938573-82938592 | MS.gene47832:intron | 45.0% | |
| GCATCTTGAGGCCAAAAGAA+AGG | - | chr4.3:82939386-82939405 | MS.gene47832:CDS | 45.0% | |
| TATTATTTGGCAACCGGGGT+CGG | - | chr4.3:82938683-82938702 | MS.gene47832:intron | 45.0% | |
| TCAGTCAACGGTATTAAGCC+AGG | + | chr4.3:82939050-82939069 | None:intergenic | 45.0% | |
| TGACCATCAGACCATGTCAA+TGG | + | chr4.3:82938184-82938203 | None:intergenic | 45.0% | |
| TGATGTTGCAACCCAGATCA+CGG | - | chr4.3:82939710-82939729 | MS.gene47832:intron | 45.0% | |
| TTGCGAAATGACATCCAGTG+GGG | - | chr4.3:82940375-82940394 | MS.gene47832:intron | 45.0% | |
| ! | AACAAGGTGATGATGAGCGT+TGG | + | chr4.3:82939347-82939366 | None:intergenic | 45.0% |
| ! | AACTCTGGTTTCCATCGGAA+AGG | + | chr4.3:82938425-82938444 | None:intergenic | 45.0% |
| ! | ACTCTGGTTTCCATCGGAAA+GGG | + | chr4.3:82938424-82938443 | None:intergenic | 45.0% |
| ! | ATGGCGACTCATGGTGATTT+TGG | + | chr4.3:82939874-82939893 | None:intergenic | 45.0% |
| ! | ATTGGCTTCTCTGGTAGAAC+CGG | + | chr4.3:82938828-82938847 | None:intergenic | 45.0% |
| ! | CAGCTTTGTAGGGTTGAGTT+AGG | - | chr4.3:82940734-82940753 | MS.gene47832:intron | 45.0% |
| ! | CCATTCGATGTCATTTCGCA+AGG | + | chr4.3:82941050-82941069 | None:intergenic | 45.0% |
| ! | CGCAAGGCATTACCATGAAT+TGG | + | chr4.3:82940360-82940379 | None:intergenic | 45.0% |
| ! | CTCAATTGTGGTTTGCGTTG+CGG | - | chr4.3:82940470-82940489 | MS.gene47832:intron | 45.0% |
| ! | GCCAGGTTTCGAGAACATTT+TGG | + | chr4.3:82938347-82938366 | None:intergenic | 45.0% |
| ! | GCTGGCAATGTTCTAAGTCA+TGG | - | chr4.3:82939594-82939613 | MS.gene47832:intron | 45.0% |
| ! | TGATGTTGCTGCCCAGATTT+TGG | - | chr4.3:82940514-82940533 | MS.gene47832:intron | 45.0% |
| ! | TGTCTGTTTGGAACCAATCG+CGG | - | chr4.3:82939807-82939826 | MS.gene47832:intron | 45.0% |
| ! | TTCAACTGATGGCTCTACCA+CGG | + | chr4.3:82939114-82939133 | None:intergenic | 45.0% |
| !! | AACATAGCCATTGGCTTCTC+TGG | + | chr4.3:82938837-82938856 | None:intergenic | 45.0% |
| ACTCATCAAGCGGTTACCTC+TGG | + | chr4.3:82939164-82939183 | None:intergenic | 50.0% | |
| ACTTTCTGTGAGATCCTCCG+AGG | + | chr4.3:82938877-82938896 | None:intergenic | 50.0% | |
| ATTACCAGAGCCCTTTCCGA+TGG | - | chr4.3:82938411-82938430 | MS.gene47832:intron | 50.0% | |
| CAAAGCTGGTGAAGCCCTAA+CGG | + | chr4.3:82940722-82940741 | None:intergenic | 50.0% | |
| CAGATGGCACTGCATGCAAA+GGG | + | chr4.3:82937115-82937134 | None:intergenic | 50.0% | |
| CCTTGCGAAATGACATCCAG+TGG | - | chr4.3:82940373-82940392 | MS.gene47832:intron | 50.0% | |
| CGCAACGCAAACCACAATTG+AGG | + | chr4.3:82940472-82940491 | None:intergenic | 50.0% | |
| CGGAAAATCGCAGTCAAGTG+TGG | - | chr4.3:82939641-82939660 | MS.gene47832:intron | 50.0% | |
| CTGGTAATCCAGAGTTCGGT+CGG | + | chr4.3:82938399-82938418 | None:intergenic | 50.0% | |
| GACACAATCATGGCGACTCA+TGG | + | chr4.3:82939883-82939902 | None:intergenic | 50.0% | |
| GATGCATGCAACCTCAGTTG+TGG | - | chr4.3:82939666-82939685 | MS.gene47832:intron | 50.0% | |
| GGTTCTACCAGAGAAGCCAA+TGG | - | chr4.3:82938827-82938846 | MS.gene47832:intron | 50.0% | |
| TCAGATGGCACTGCATGCAA+AGG | + | chr4.3:82937116-82937135 | None:intergenic | 50.0% | |
| TGCAGTGCCATCTGAACAAC+AGG | - | chr4.3:82937121-82937140 | MS.gene47832:intron | 50.0% | |
| TGGTAATCCAGAGTTCGGTC+GGG | + | chr4.3:82938398-82938417 | None:intergenic | 50.0% | |
| TGTGTTCAGGATATGCTGGC+TGG | - | chr4.3:82938615-82938634 | MS.gene47832:intron | 50.0% | |
| ! | AGGGCTTCACCAGCTTTGTA+GGG | - | chr4.3:82940724-82940743 | MS.gene47832:intron | 50.0% |
| ! | CCACTGGATGTCATTTCGCA+AGG | + | chr4.3:82940376-82940395 | None:intergenic | 50.0% |
| ! | CCGTTGACTGAAGAAGAAGC+TGG | - | chr4.3:82939059-82939078 | MS.gene47832:CDS | 50.0% |
| ! | GGCTCTGGTAATCCAGAGTT+CGG | + | chr4.3:82938403-82938422 | None:intergenic | 50.0% |
| ! | TAGGGCTTCACCAGCTTTGT+AGG | - | chr4.3:82940723-82940742 | MS.gene47832:intron | 50.0% |
| AAAGGTTTGCGGCCGTGATC+TGG | + | chr4.3:82939725-82939744 | None:intergenic | 55.0% | |
| AAGGTTTGCGGCCGTGATCT+GGG | + | chr4.3:82939724-82939743 | None:intergenic | 55.0% | |
| CATCCAGTGGGGCTTCGAAA+CGG | - | chr4.3:82940386-82940405 | MS.gene47832:intron | 55.0% | |
| GGAGGTCCTGTTCTTGTACC+TGG | - | chr4.3:82939029-82939048 | MS.gene47832:CDS | 55.0% | |
| GTTTCCATCGGAAAGGGCTC+TGG | + | chr4.3:82938418-82938437 | None:intergenic | 55.0% | |
| TAATCCAGAGTTCGGTCGGG+AGG | + | chr4.3:82938395-82938414 | None:intergenic | 55.0% | |
| TGGATTACTCGATCCGACCC+CGG | + | chr4.3:82938699-82938718 | None:intergenic | 55.0% | |
| TTACCGTTTCGAAGCCCCAC+TGG | + | chr4.3:82940392-82940411 | None:intergenic | 55.0% | |
| ! | CTGTTTGGAACCAATCGCGG+TGG | - | chr4.3:82939810-82939829 | MS.gene47832:intron | 55.0% |
| AACCTGGCTGGAGCAGTCCT+TGG | - | chr4.3:82938359-82938378 | MS.gene47832:intron | 60.0% | |
| AATCACAGCGCCACCGCGAT+TGG | + | chr4.3:82939823-82939842 | None:intergenic | 60.0% | |
| CATCGAATGGGGCCGCGAAA+CGG | - | chr4.3:82941060-82941079 | MS.gene47832:CDS | 60.0% | |
| GGAGCGGCACACTCATCAAG+CGG | + | chr4.3:82939174-82939193 | None:intergenic | 60.0% | |
| GGCTTCTCTGGTAGAACCGG+AGG | + | chr4.3:82938825-82938844 | None:intergenic | 60.0% | |
| TTCACCTCCCGACCGAACTC+TGG | - | chr4.3:82938388-82938407 | MS.gene47832:intron | 60.0% | |
| TTCGGTCGGGAGGTGAAGTC+TGG | + | chr4.3:82938385-82938404 | None:intergenic | 60.0% | |
| CGGGAGGTGAAGTCTGGCCA+AGG | + | chr4.3:82938379-82938398 | None:intergenic | 65.0% | |
| GGCCAAGGACTGCTCCAGCC+AGG | + | chr4.3:82938364-82938383 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 82936917 | 82941117 | 82936917 | ID=MS.gene47832 |
| chr4.3 | mRNA | 82936917 | 82941117 | 82936917 | ID=MS.gene47832.t1;Parent=MS.gene47832 |
| chr4.3 | exon | 82940892 | 82941117 | 82940892 | ID=MS.gene47832.t1.exon1;Parent=MS.gene47832.t1 |
| chr4.3 | CDS | 82940892 | 82941117 | 82940892 | ID=cds.MS.gene47832.t1;Parent=MS.gene47832.t1 |
| chr4.3 | exon | 82940065 | 82940113 | 82940065 | ID=MS.gene47832.t1.exon2;Parent=MS.gene47832.t1 |
| chr4.3 | CDS | 82940065 | 82940113 | 82940065 | ID=cds.MS.gene47832.t1;Parent=MS.gene47832.t1 |
| chr4.3 | exon | 82939812 | 82939972 | 82939812 | ID=MS.gene47832.t1.exon3;Parent=MS.gene47832.t1 |
| chr4.3 | CDS | 82939812 | 82939972 | 82939812 | ID=cds.MS.gene47832.t1;Parent=MS.gene47832.t1 |
| chr4.3 | exon | 82938868 | 82939410 | 82938868 | ID=MS.gene47832.t1.exon4;Parent=MS.gene47832.t1 |
| chr4.3 | CDS | 82938868 | 82939410 | 82938868 | ID=cds.MS.gene47832.t1;Parent=MS.gene47832.t1 |
| chr4.3 | exon | 82937627 | 82937806 | 82937627 | ID=MS.gene47832.t1.exon5;Parent=MS.gene47832.t1 |
| chr4.3 | CDS | 82937627 | 82937806 | 82937627 | ID=cds.MS.gene47832.t1;Parent=MS.gene47832.t1 |
| chr4.3 | exon | 82936917 | 82937138 | 82936917 | ID=MS.gene47832.t1.exon6;Parent=MS.gene47832.t1 |
| chr4.3 | CDS | 82936917 | 82937138 | 82936917 | ID=cds.MS.gene47832.t1;Parent=MS.gene47832.t1 |
| Gene Sequence |
| Protein sequence |
