Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50052.t1 | XP_013456378.1 | 98.2 | 434 | 8 | 0 | 1 | 434 | 1 | 434 | 3.50E-240 | 840.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50052.t1 | Q944K2 | 71.9 | 434 | 122 | 0 | 1 | 434 | 4 | 437 | 5.6e-186 | 651.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50052.t1 | A0A072UL06 | 98.2 | 434 | 8 | 0 | 1 | 434 | 1 | 434 | 2.5e-240 | 840.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene50925 | MS.gene50052 | PPI |
| MS.gene06356 | MS.gene50052 | PPI |
| MS.gene63757 | MS.gene50052 | PPI |
| MS.gene50921 | MS.gene50052 | PPI |
| MS.gene05210 | MS.gene50052 | PPI |
| MS.gene37721 | MS.gene50052 | PPI |
| MS.gene40930 | MS.gene50052 | PPI |
| MS.gene50052 | MS.gene026843 | PPI |
| MS.gene057988 | MS.gene50052 | PPI |
| MS.gene013275 | MS.gene50052 | PPI |
| MS.gene039901 | MS.gene50052 | PPI |
| MS.gene060603 | MS.gene50052 | PPI |
| MS.gene57836 | MS.gene50052 | PPI |
| MS.gene039903 | MS.gene50052 | PPI |
| MS.gene049245 | MS.gene50052 | PPI |
| MS.gene001011 | MS.gene50052 | PPI |
| MS.gene50052 | MS.gene54807 | PPI |
| MS.gene005960 | MS.gene50052 | PPI |
| MS.gene34049 | MS.gene50052 | PPI |
| MS.gene50024 | MS.gene50052 | PPI |
| MS.gene060182 | MS.gene50052 | PPI |
| MS.gene057990 | MS.gene50052 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50052.t1 | MTR_4g069240 | 98.157 | 434 | 8 | 0 | 1 | 434 | 1 | 434 | 0.0 | 875 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50052.t1 | AT5G66680 | 71.889 | 434 | 122 | 0 | 1 | 434 | 4 | 437 | 0.0 | 661 |
Find 86 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGATGCTGCTGCTATTT+TGG | 0.127598 | 4.2:+37400654 | MS.gene50052:CDS |
| GTATCTCTGAAGCGCGATTT+TGG | 0.159842 | 4.2:-37400405 | None:intergenic |
| TCGTTATTTCACATCATTTA+AGG | 0.188816 | 4.2:+37403815 | MS.gene50052:CDS |
| GACTTGTCAACTTAGATTTC+AGG | 0.250871 | 4.2:-37401758 | None:intergenic |
| TTTAAGGTTCCAGATATCTA+TGG | 0.267947 | 4.2:+37403831 | MS.gene50052:CDS |
| CTCATTAGTTTCAGTTATAC+AGG | 0.308347 | 4.2:+37401806 | MS.gene50052:CDS |
| TATTAAGTCTGATGTGATCT+TGG | 0.320322 | 4.2:+37401364 | MS.gene50052:CDS |
| AAATATTATTACCAGGCTAT+TGG | 0.336609 | 4.2:-37401600 | None:intergenic |
| CGAAACTCACGTTCAATTGT+TGG | 0.346124 | 4.2:-37400464 | None:intergenic |
| GTGAAGGAATTGCATAGAAT+TGG | 0.347741 | 4.2:-37400251 | None:intergenic |
| CTATAGGATCAACGATGATT+TGG | 0.367849 | 4.2:+37403481 | MS.gene50052:CDS |
| GTTGAGATTTATGAGTGGTC+TGG | 0.374977 | 4.2:+37403607 | MS.gene50052:CDS |
| TGGAAAACCCCATAGATATC+TGG | 0.384542 | 4.2:-37403840 | None:intergenic |
| ATGTGCAACACCACAAAGTT+GGG | 0.388125 | 4.2:+37403438 | MS.gene50052:CDS |
| GAGAGAGTGGGAAGATTTGA+TGG | 0.392640 | 4.2:-37400324 | None:intergenic |
| TTAATGAATGTCCAATTCCT+TGG | 0.398115 | 4.2:-37401571 | None:intergenic |
| CATTAGTTTCCCCAACTTTG+TGG | 0.403219 | 4.2:-37403448 | None:intergenic |
| ATCATCGTTGATCCTATAGA+TGG | 0.403251 | 4.2:-37403477 | None:intergenic |
| CCAGCCGCTTATCCCTACTA+TGG | 0.411476 | 4.2:+37404451 | MS.gene50052:CDS |
| GAGATTTGAAGTAGAGAGAG+TGG | 0.412935 | 4.2:-37400337 | None:intergenic |
| CTAATGAACCATCCATCTAT+AGG | 0.413531 | 4.2:+37403465 | MS.gene50052:CDS |
| TGAAAATGCTGCTCCATAGT+AGG | 0.419345 | 4.2:-37404464 | None:intergenic |
| ACAATGCATCTGATTTGATC+AGG | 0.421179 | 4.2:+37400719 | MS.gene50052:CDS |
| GCGTCGATCTGAAGGTTTAT+CGG | 0.423696 | 4.2:-37400276 | None:intergenic |
| GATAAAGTCTTCAAGACATA+GGG | 0.433134 | 4.2:-37403688 | None:intergenic |
| TCTTGACTGAAGTTAGCAAA+TGG | 0.433383 | 4.2:+37403263 | MS.gene50052:CDS |
| TATCATACTCCACTTTGAAC+TGG | 0.448661 | 4.2:-37403860 | None:intergenic |
| AATTCAGGTGTGCAGAAAGC+TGG | 0.454482 | 4.2:+37402656 | MS.gene50052:CDS |
| ATTAAGTCTGATGTGATCTT+GGG | 0.456547 | 4.2:+37401365 | MS.gene50052:CDS |
| AAGCTTATCTTTAGCAAAGC+AGG | 0.462446 | 4.2:+37403896 | MS.gene50052:CDS |
| TTAAGGTTCCAGATATCTAT+GGG | 0.469569 | 4.2:+37403832 | MS.gene50052:CDS |
| TGATAAAGTCTTCAAGACAT+AGG | 0.473483 | 4.2:-37403689 | None:intergenic |
| CCAATTCCTTGGAAAAGTAC+TGG | 0.475571 | 4.2:-37401560 | None:intergenic |
| CATTGAGCATGTTCAGCAAC+CGG | 0.481143 | 4.2:+37402525 | MS.gene50052:CDS |
| TTCAAATCTCTTCAATCTCG+TGG | 0.481633 | 4.2:+37400350 | MS.gene50052:CDS |
| CTTGACTGAAGTTAGCAAAT+GGG | 0.483655 | 4.2:+37403264 | MS.gene50052:CDS |
| ATTAAATCCTTCCAATAGCC+TGG | 0.483759 | 4.2:+37401589 | MS.gene50052:CDS |
| TAACACTTCACTCACTTGGT+TGG | 0.489831 | 4.2:-37402683 | None:intergenic |
| CCTTGAGGTGACCTCTTTCG+TGG | 0.494374 | 4.2:-37403291 | None:intergenic |
| CCATAGTAGGGATAAGCGGC+TGG | 0.494726 | 4.2:-37404451 | None:intergenic |
| TTTATTGTGATGCAGATGGC+AGG | 0.497902 | 4.2:+37404760 | MS.gene50052:intron |
| AATGTGCAACACCACAAAGT+TGG | 0.500432 | 4.2:+37403437 | MS.gene50052:CDS |
| TTGAGATTTATGAGTGGTCT+GGG | 0.504402 | 4.2:+37403608 | MS.gene50052:CDS |
| AATGCTCGGATATTGATCTC+TGG | 0.509944 | 4.2:+37402500 | MS.gene50052:CDS |
| CGTCGATCTGAAGGTTTATC+GGG | 0.511311 | 4.2:-37400275 | None:intergenic |
| GAAAATGCTGCTCCATAGTA+GGG | 0.513175 | 4.2:-37404463 | None:intergenic |
| ACAAGTCCTCCATCACTCCT+TGG | 0.516620 | 4.2:+37401774 | MS.gene50052:CDS |
| GACAACATGGGAACCTTATG+TGG | 0.527130 | 4.2:+37403630 | MS.gene50052:CDS |
| AGATTTGAAGTAGAGAGAGT+GGG | 0.529803 | 4.2:-37400336 | None:intergenic |
| TGAACATCATCAGCCACATA+AGG | 0.529923 | 4.2:-37403643 | None:intergenic |
| TTCCTAGGATTATGGTGCTG+TGG | 0.537578 | 4.2:+37401271 | MS.gene50052:intron |
| AATCAATGTGTGATCCCCTT+CGG | 0.541860 | 4.2:-37401327 | None:intergenic |
| ACAAGGATGCGTCGATCTGA+AGG | 0.544725 | 4.2:-37400284 | None:intergenic |
| ATGAGTGGTCTGGGACAACA+TGG | 0.550274 | 4.2:+37403617 | MS.gene50052:CDS |
| ATTGAAGATCCAAGGAGTGA+TGG | 0.556714 | 4.2:-37401783 | None:intergenic |
| CTAATGAGATTGAAGATCCA+AGG | 0.557979 | 4.2:-37401791 | None:intergenic |
| AACAACAGACATGACAAGTC+AGG | 0.560072 | 4.2:+37403229 | MS.gene50052:intron |
| AGGGAAATTGCTACTGAGTG+TGG | 0.561576 | 4.2:+37400739 | MS.gene50052:CDS |
| AAAATCGCGCTTCAGAGATA+CGG | 0.566554 | 4.2:+37400407 | MS.gene50052:CDS |
| ATTATTACCAGGCTATTGGA+AGG | 0.569871 | 4.2:-37401596 | None:intergenic |
| TTGTGTCTGAAAGGACGGAC+AGG | 0.571154 | 4.2:-37404409 | None:intergenic |
| TCGTATTCATTGTGTCTGAA+AGG | 0.583042 | 4.2:-37404418 | None:intergenic |
| CAATGCATCTGATTTGATCA+GGG | 0.586350 | 4.2:+37400720 | MS.gene50052:CDS |
| GTCAGGCGAGAAATAATGCT+CGG | 0.592058 | 4.2:+37402486 | MS.gene50052:intron |
| ATAGAATTGGAATGAGAGTG+AGG | 0.592884 | 4.2:-37400238 | None:intergenic |
| TGAAGGTTTATCGGGAGTGA+AGG | 0.596643 | 4.2:-37400267 | None:intergenic |
| TATGCAGTCTCTTCTACCGA+AGG | 0.597980 | 4.2:+37401311 | MS.gene50052:CDS |
| TGCTCCATAGTAGGGATAAG+CGG | 0.599555 | 4.2:-37404455 | None:intergenic |
| GCTGTGGTTGTAGATCATGC+TGG | 0.605916 | 4.2:+37401287 | MS.gene50052:CDS |
| ATTCATTGTGTCTGAAAGGA+CGG | 0.607357 | 4.2:-37404414 | None:intergenic |
| ATGCAGTCTCTTCTACCGAA+GGG | 0.608718 | 4.2:+37401312 | MS.gene50052:CDS |
| GAAGATCCAAGGAGTGATGG+AGG | 0.614007 | 4.2:-37401780 | None:intergenic |
| TCGTTGATCCTATAGATGGA+TGG | 0.614275 | 4.2:-37403473 | None:intergenic |
| AATTGCTACTGAGTGTGGAG+TGG | 0.615177 | 4.2:+37400744 | MS.gene50052:CDS |
| CATAGTAGGGATAAGCGGCT+GGG | 0.620593 | 4.2:-37404450 | None:intergenic |
| TGCAGTCTCTTCTACCGAAG+GGG | 0.628734 | 4.2:+37401313 | MS.gene50052:CDS |
| CGAAGTCATCGAGTAAGACA+AGG | 0.630709 | 4.2:-37400301 | None:intergenic |
| CCACGAAAGAGGTCACCTCA+AGG | 0.647535 | 4.2:+37403291 | MS.gene50052:CDS |
| AAAGTGGAGTATGATAGACT+TGG | 0.654312 | 4.2:+37403867 | MS.gene50052:CDS |
| GACTTTATCAAATGACAACA+AGG | 0.655876 | 4.2:+37403702 | MS.gene50052:CDS |
| TGTGCAACACCACAAAGTTG+GGG | 0.661973 | 4.2:+37403439 | MS.gene50052:CDS |
| ATAAAGTCTTCAAGACATAG+GGG | 0.669354 | 4.2:-37403687 | None:intergenic |
| GTGTGGAGTGGACTTTGATG+AGG | 0.699025 | 4.2:+37400756 | MS.gene50052:CDS |
| TAAGGTTCCAGATATCTATG+GGG | 0.708543 | 4.2:+37403833 | MS.gene50052:CDS |
| ACTCTGTTGAGATTTATGAG+TGG | 0.712074 | 4.2:+37403602 | MS.gene50052:CDS |
| TGAGTGGTCTGGGACAACAT+GGG | 0.739725 | 4.2:+37403618 | MS.gene50052:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATTGATATATTAGA+GGG | - | chr4.2:37403932-37403951 | None:intergenic | 10.0% |
| !! | TAAAAATATTGATATATTAG+AGG | - | chr4.2:37403933-37403952 | None:intergenic | 10.0% |
| !! | TAAAATTGAAATAATAAACA+AGG | - | chr4.2:37402463-37402482 | None:intergenic | 10.0% |
| !!! | ATTTTTAATTAAAGAATACA+TGG | - | chr4.2:37403539-37403558 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTAAAGATTACAT+AGG | + | chr4.2:37401027-37401046 | MS.gene50052:intron | 10.0% |
| !! | AAAACATCAAAAGAAAAAAA+TGG | - | chr4.2:37402035-37402054 | None:intergenic | 15.0% |
| !! | AAACATCAAAAGATAAAAAA+CGG | + | chr4.2:37402263-37402282 | MS.gene50052:intron | 15.0% |
| !! | CTTTAATTAAAAATGTACTT+TGG | + | chr4.2:37403545-37403564 | MS.gene50052:intron | 15.0% |
| !! | TGTGAATTTAATCATAAATA+AGG | + | chr4.2:37402171-37402190 | MS.gene50052:intron | 15.0% |
| !! | TTATAAAAGAAAAAAACTAG+AGG | + | chr4.2:37402739-37402758 | MS.gene50052:intron | 15.0% |
| !!! | ATAGAAATATTTGTATGTTT+TGG | - | chr4.2:37402207-37402226 | None:intergenic | 15.0% |
| !!! | GTGATTATAGTTTAATTTAT+TGG | + | chr4.2:37400778-37400797 | MS.gene50052:intron | 15.0% |
| !!! | TACTAAAACATCAAATATTT+TGG | - | chr4.2:37402075-37402094 | None:intergenic | 15.0% |
| !!! | TAGTAATTTCTGTTTTTTTA+TGG | + | chr4.2:37403206-37403225 | MS.gene50052:intron | 15.0% |
| !!! | TGTTAAATTTTCGATTTTTA+TGG | + | chr4.2:37400589-37400608 | MS.gene50052:intron | 15.0% |
| !!! | TTATTTCAATTTTAATTGTC+AGG | + | chr4.2:37402469-37402488 | MS.gene50052:intron | 15.0% |
| !!! | TTCATTAAATTGGAATTTTT+TGG | + | chr4.2:37402623-37402642 | MS.gene50052:intron | 15.0% |
| !!! | TTTTTTTCTTTTGATGTTTT+AGG | + | chr4.2:37402035-37402054 | MS.gene50052:intron | 15.0% |
| !! | AACAAATAAAAACACATAAG+AGG | - | chr4.2:37401245-37401264 | None:intergenic | 20.0% |
| !! | ACAAATAAAAACACATAAGA+GGG | - | chr4.2:37401244-37401263 | None:intergenic | 20.0% |
| !! | AGAAAATTATAGTTACCAAA+CGG | + | chr4.2:37401148-37401167 | MS.gene50052:intron | 20.0% |
| !! | ATAAAAAAATGTATTGTAGC+AGG | - | chr4.2:37403075-37403094 | None:intergenic | 20.0% |
| !! | ATCTAACAAACAATTGAAAA+TGG | - | chr4.2:37400508-37400527 | None:intergenic | 20.0% |
| !! | ATGAACAATGAGAATAAAAT+TGG | - | chr4.2:37403336-37403355 | None:intergenic | 20.0% |
| !! | ATGTATTAAAGATGAAATTC+AGG | - | chr4.2:37404549-37404568 | None:intergenic | 20.0% |
| !! | CCAACAAAAAACATTAAATT+AGG | - | chr4.2:37404231-37404250 | None:intergenic | 20.0% |
| !! | GAGTTTATTAGAGAAAAATT+AGG | - | chr4.2:37403756-37403775 | None:intergenic | 20.0% |
| !! | TAAAAAAATGTATTGTAGCA+GGG | - | chr4.2:37403074-37403093 | None:intergenic | 20.0% |
| !! | TCACTTTACTTTCATTAAAT+TGG | + | chr4.2:37402613-37402632 | MS.gene50052:intron | 20.0% |
| !! | TCTAACAAACAATTGAAAAT+GGG | - | chr4.2:37400507-37400526 | None:intergenic | 20.0% |
| !!! | CCTAATTTAATGTTTTTTGT+TGG | + | chr4.2:37404228-37404247 | MS.gene50052:intron | 20.0% |
| !!! | CTGGAATTATTGATAATAAT+AGG | + | chr4.2:37404331-37404350 | MS.gene50052:intron | 20.0% |
| !!! | GTTTCTCATATAGTTTTATA+AGG | - | chr4.2:37402775-37402794 | None:intergenic | 20.0% |
| !!! | TCTTTTATGTATTTCATTTC+AGG | + | chr4.2:37401692-37401711 | MS.gene50052:intron | 20.0% |
| !!! | TTACCACTTTTTTTTTTTAG+AGG | + | chr4.2:37403021-37403040 | MS.gene50052:intron | 20.0% |
| !!! | TTATTTGTTTTGTTTTTCCT+AGG | + | chr4.2:37401256-37401275 | MS.gene50052:intron | 20.0% |
| !!! | TTTATGGAAATTGGTTTTTT+GGG | + | chr4.2:37400605-37400624 | MS.gene50052:intron | 20.0% |
| !!! | TTTGGAACTTTTTTTGAAAT+GGG | + | chr4.2:37400535-37400554 | MS.gene50052:intron | 20.0% |
| !!! | TTTTATGGAAATTGGTTTTT+TGG | + | chr4.2:37400604-37400623 | MS.gene50052:intron | 20.0% |
| !!! | TTTTCGATTTTTATGGAAAT+TGG | + | chr4.2:37400596-37400615 | MS.gene50052:intron | 20.0% |
| !!! | TTTTGGAACTTTTTTTGAAA+TGG | + | chr4.2:37400534-37400553 | MS.gene50052:intron | 20.0% |
| ! | AAAATCTAACGATACAGAAA+GGG | - | chr4.2:37404001-37404020 | None:intergenic | 25.0% |
| ! | AAACTCTTGATTGAAATTCT+TGG | + | chr4.2:37403770-37403789 | MS.gene50052:intron | 25.0% |
| ! | AAATATTATTACCAGGCTAT+TGG | - | chr4.2:37401603-37401622 | None:intergenic | 25.0% |
| ! | AACTCTTGATTGAAATTCTT+GGG | + | chr4.2:37403771-37403790 | MS.gene50052:intron | 25.0% |
| ! | AAGTTATTACATAAAAGCCA+TGG | - | chr4.2:37404739-37404758 | None:intergenic | 25.0% |
| ! | AATAAGCAAAAACAACTTCA+AGG | - | chr4.2:37401513-37401532 | None:intergenic | 25.0% |
| ! | ACATCAAAAGAAAAAAATGG+AGG | - | chr4.2:37402032-37402051 | None:intergenic | 25.0% |
| ! | AGAATATCTATCTTTCTCAT+TGG | + | chr4.2:37404493-37404512 | MS.gene50052:intron | 25.0% |
| ! | ATCAAAAGATAAAAAACGGA+GGG | + | chr4.2:37402267-37402286 | MS.gene50052:intron | 25.0% |
| ! | CAAATAAAAACACATAAGAG+GGG | - | chr4.2:37401243-37401262 | None:intergenic | 25.0% |
| ! | CATCAAAAGAAAAAAATGGA+GGG | - | chr4.2:37402031-37402050 | None:intergenic | 25.0% |
| ! | GAAAAAAGTTTCAAAACTAC+AGG | - | chr4.2:37404307-37404326 | None:intergenic | 25.0% |
| ! | GAATATCTATCTTTCTCATT+GGG | + | chr4.2:37404494-37404513 | MS.gene50052:intron | 25.0% |
| ! | GATTCAGAAATATTATTACC+AGG | - | chr4.2:37401610-37401629 | None:intergenic | 25.0% |
| ! | TAATACATTCAAAACGCTTA+GGG | + | chr4.2:37404561-37404580 | MS.gene50052:intron | 25.0% |
| ! | TCGTGTTAAATTCCAATATT+TGG | + | chr4.2:37404278-37404297 | MS.gene50052:intron | 25.0% |
| ! | TGCAATGTATGTACTATAAA+TGG | - | chr4.2:37402360-37402379 | None:intergenic | 25.0% |
| ! | TGGAAACAACAAAAAGATAA+AGG | - | chr4.2:37402340-37402359 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACTTTA+TGG | + | chr4.2:37402905-37402924 | MS.gene50052:intron | 25.0% |
| ! | TTAATACATTCAAAACGCTT+AGG | + | chr4.2:37404560-37404579 | MS.gene50052:intron | 25.0% |
| !! | CGCTTTTCAAATCTTTTTAT+AGG | + | chr4.2:37403576-37403595 | MS.gene50052:intron | 25.0% |
| !! | GTACCTCTAAAAAAAAAAAG+TGG | - | chr4.2:37403027-37403046 | None:intergenic | 25.0% |
| !! | TCAGTTATGTGTTTATGTTT+TGG | + | chr4.2:37400831-37400850 | MS.gene50052:intron | 25.0% |
| !! | TCGTTATTTCACATCATTTA+AGG | + | chr4.2:37403815-37403834 | MS.gene50052:CDS | 25.0% |
| !! | TTCAATTGTTTGTTAGATCT+TGG | + | chr4.2:37400510-37400529 | MS.gene50052:intron | 25.0% |
| !!! | ATTTTGGATTTTGTTGATTC+TGG | + | chr4.2:37400670-37400689 | MS.gene50052:CDS | 25.0% |
| !!! | CTTTAGGAAATGTTGATTTT+GGG | + | chr4.2:37400559-37400578 | MS.gene50052:intron | 25.0% |
| !!! | CTTTTTTTTTTTAGAGGTAC+CGG | + | chr4.2:37403027-37403046 | MS.gene50052:intron | 25.0% |
| !!! | TCTAGGATATGATTTTTTTG+TGG | + | chr4.2:37403158-37403177 | MS.gene50052:intron | 25.0% |
| !!! | TCTTTAGGAAATGTTGATTT+TGG | + | chr4.2:37400558-37400577 | MS.gene50052:intron | 25.0% |
| !!! | TTTGAAACTTTTTTCTTCAC+TGG | + | chr4.2:37404312-37404331 | MS.gene50052:intron | 25.0% |
| !!! | TTTTGTTTTTCCTAGGATTA+TGG | + | chr4.2:37401263-37401282 | MS.gene50052:intron | 25.0% |
| !!! | TTTTTTTGAAATGGGTCTTT+AGG | + | chr4.2:37400543-37400562 | MS.gene50052:intron | 25.0% |
| AAAATCATGTTTGGGTAGAA+TGG | - | chr4.2:37403960-37403979 | None:intergenic | 30.0% | |
| AAACTATTCCATGAAGGAAA+TGG | - | chr4.2:37401989-37402008 | None:intergenic | 30.0% | |
| AAATCTAACGATACAGAAAG+GGG | - | chr4.2:37404000-37404019 | None:intergenic | 30.0% | |
| AATACATTCAAAACGCTTAG+GGG | + | chr4.2:37404562-37404581 | MS.gene50052:intron | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | + | chr4.2:37402804-37402823 | MS.gene50052:intron | 30.0% | |
| ATAAAACTAGTTGTGACCTT+TGG | + | chr4.2:37402139-37402158 | MS.gene50052:intron | 30.0% | |
| ATAAAGTCTTCAAGACATAG+GGG | - | chr4.2:37403690-37403709 | None:intergenic | 30.0% | |
| ATAATTTCTCGACAGAAAAC+AGG | - | chr4.2:37402723-37402742 | None:intergenic | 30.0% | |
| ATTAAGTCTGATGTGATCTT+GGG | + | chr4.2:37401365-37401384 | MS.gene50052:CDS | 30.0% | |
| ATTATGCTTGATAAACGTTC+AGG | + | chr4.2:37401442-37401461 | MS.gene50052:intron | 30.0% | |
| CATCAAAAGATAAAAAACGG+AGG | + | chr4.2:37402266-37402285 | MS.gene50052:intron | 30.0% | |
| CGACTAAAAAAATATCCGTT+TGG | - | chr4.2:37401166-37401185 | None:intergenic | 30.0% | |
| GAAAATCTAACGATACAGAA+AGG | - | chr4.2:37404002-37404021 | None:intergenic | 30.0% | |
| GACTTTATCAAATGACAACA+AGG | + | chr4.2:37403702-37403721 | MS.gene50052:CDS | 30.0% | |
| GATAAAGTCTTCAAGACATA+GGG | - | chr4.2:37403691-37403710 | None:intergenic | 30.0% | |
| GTCAAAAAATTCTTCACTAC+TGG | + | chr4.2:37402996-37403015 | MS.gene50052:intron | 30.0% | |
| TAAAAAGAGTCAAAGGAAAG+AGG | - | chr4.2:37404138-37404157 | None:intergenic | 30.0% | |
| TAGGATAGCGAAAAATACAA+TGG | - | chr4.2:37401868-37401887 | None:intergenic | 30.0% | |
| TATTAAGTCTGATGTGATCT+TGG | + | chr4.2:37401364-37401383 | MS.gene50052:CDS | 30.0% | |
| TATTTAACACTTCACTCACT+TGG | - | chr4.2:37402690-37402709 | None:intergenic | 30.0% | |
| TGATAAAGTCTTCAAGACAT+AGG | - | chr4.2:37403692-37403711 | None:intergenic | 30.0% | |
| TGTGAGGAAAAATCATGTTT+GGG | - | chr4.2:37403968-37403987 | None:intergenic | 30.0% | |
| TTAAGGTTCCAGATATCTAT+GGG | + | chr4.2:37403832-37403851 | MS.gene50052:CDS | 30.0% | |
| TTAATGAATGTCCAATTCCT+TGG | - | chr4.2:37401574-37401593 | None:intergenic | 30.0% | |
| TTATGCTTGATAAACGTTCA+GGG | + | chr4.2:37401443-37401462 | MS.gene50052:intron | 30.0% | |
| TTGGTTGAATTTGTAGTGTT+GGG | + | chr4.2:37400948-37400967 | MS.gene50052:intron | 30.0% | |
| TTGTGAGGAAAAATCATGTT+TGG | - | chr4.2:37403969-37403988 | None:intergenic | 30.0% | |
| ! | CTCATTAGTTTCAGTTATAC+AGG | + | chr4.2:37401806-37401825 | MS.gene50052:CDS | 30.0% |
| ! | TGCTTAATGTGTTGACATTA+AGG | + | chr4.2:37403409-37403428 | MS.gene50052:intron | 30.0% |
| ! | TTAATGTGTTGACATTAAGG+CGG | + | chr4.2:37403412-37403431 | MS.gene50052:intron | 30.0% |
| ! | TTCCTTTGACTCTTTTTAGA+TGG | + | chr4.2:37404140-37404159 | MS.gene50052:intron | 30.0% |
| ! | TTTAAGGTTCCAGATATCTA+TGG | + | chr4.2:37403831-37403850 | MS.gene50052:CDS | 30.0% |
| ! | TTTTCAACAAGGGTAAACTT+GGG | - | chr4.2:37402112-37402131 | None:intergenic | 30.0% |
| ! | TTTTTAGATGGTGATCTCTA+TGG | + | chr4.2:37404152-37404171 | MS.gene50052:intron | 30.0% |
| !! | GTTTGTTAGATCTTGGTTTT+TGG | + | chr4.2:37400517-37400536 | MS.gene50052:intron | 30.0% |
| !! | TATGGTGTGTTTTTCAACAA+GGG | - | chr4.2:37402122-37402141 | None:intergenic | 30.0% |
| !! | TGTATTTTTATCGTACCTTG+AGG | - | chr4.2:37403309-37403328 | None:intergenic | 30.0% |
| !! | TTATGGTGTGTTTTTCAACA+AGG | - | chr4.2:37402123-37402142 | None:intergenic | 30.0% |
| !! | TTTGGCAGATTTTTCAATTC+AGG | + | chr4.2:37402641-37402660 | MS.gene50052:intron | 30.0% |
| !! | TTTTTCAACAAGGGTAAACT+TGG | - | chr4.2:37402113-37402132 | None:intergenic | 30.0% |
| !!! | AAAGGTCACAACTAGTTTTA+TGG | - | chr4.2:37402140-37402159 | None:intergenic | 30.0% |
| !!! | CTTTTTTATTGTGATGCAGA+TGG | + | chr4.2:37404756-37404775 | MS.gene50052:intron | 30.0% |
| !!! | TCTTTTGATGTTTTAGCTCT+TGG | - | chr4.2:37402256-37402275 | None:intergenic | 30.0% |
| AAAGTGGAGTATGATAGACT+TGG | + | chr4.2:37403867-37403886 | MS.gene50052:CDS | 35.0% | |
| AACTACAGGTTGCCAAATAT+TGG | - | chr4.2:37404293-37404312 | None:intergenic | 35.0% | |
| AAGAAAAAAACTAGAGGCAG+AGG | + | chr4.2:37402745-37402764 | MS.gene50052:intron | 35.0% | |
| AAGCTTATCTTTAGCAAAGC+AGG | + | chr4.2:37403896-37403915 | MS.gene50052:CDS | 35.0% | |
| ACTCTGTTGAGATTTATGAG+TGG | + | chr4.2:37403602-37403621 | MS.gene50052:CDS | 35.0% | |
| ATAGAATTGGAATGAGAGTG+AGG | - | chr4.2:37400241-37400260 | None:intergenic | 35.0% | |
| ATCATCGTTGATCCTATAGA+TGG | - | chr4.2:37403480-37403499 | None:intergenic | 35.0% | |
| ATCTATCTTTCTCATTGGGA+TGG | + | chr4.2:37404498-37404517 | MS.gene50052:intron | 35.0% | |
| ATTAAATCCTTCCAATAGCC+TGG | + | chr4.2:37401589-37401608 | MS.gene50052:CDS | 35.0% | |
| ATTATTACCAGGCTATTGGA+AGG | - | chr4.2:37401599-37401618 | None:intergenic | 35.0% | |
| ATTCACATGTGATAAGCCAA+AGG | - | chr4.2:37402158-37402177 | None:intergenic | 35.0% | |
| ATTCATTGTGTCTGAAAGGA+CGG | - | chr4.2:37404417-37404436 | None:intergenic | 35.0% | |
| CAAATGACAACAAGGTTCTT+TGG | + | chr4.2:37403710-37403729 | MS.gene50052:intron | 35.0% | |
| CACATTAGAACTTCTCTTCA+GGG | + | chr4.2:37404041-37404060 | MS.gene50052:intron | 35.0% | |
| CACCATCTAAAAAGAGTCAA+AGG | - | chr4.2:37404145-37404164 | None:intergenic | 35.0% | |
| CATTTAGCATCATTAAACCC+AGG | - | chr4.2:37402578-37402597 | None:intergenic | 35.0% | |
| CTAATGAACCATCCATCTAT+AGG | + | chr4.2:37403465-37403484 | MS.gene50052:CDS | 35.0% | |
| CTAATGAGATTGAAGATCCA+AGG | - | chr4.2:37401794-37401813 | None:intergenic | 35.0% | |
| CTATAGGATCAACGATGATT+TGG | + | chr4.2:37403481-37403500 | MS.gene50052:CDS | 35.0% | |
| CTTCCCAGTAAAAAGAAGAA+GGG | - | chr4.2:37404666-37404685 | None:intergenic | 35.0% | |
| CTTGACTGAAGTTAGCAAAT+GGG | + | chr4.2:37403264-37403283 | MS.gene50052:CDS | 35.0% | |
| CTTGGCTACTACTATAATTG+TGG | + | chr4.2:37400871-37400890 | MS.gene50052:intron | 35.0% | |
| CTTGGGAAGCAAAAAAATTG+AGG | + | chr4.2:37401382-37401401 | MS.gene50052:CDS | 35.0% | |
| GAAGTTATCCATTTCCTTCA+TGG | + | chr4.2:37401978-37401997 | MS.gene50052:intron | 35.0% | |
| GACTTGTCAACTTAGATTTC+AGG | - | chr4.2:37401761-37401780 | None:intergenic | 35.0% | |
| GAGGAATTCTAAACCCATAA+AGG | - | chr4.2:37404119-37404138 | None:intergenic | 35.0% | |
| GCATGTAAACTATTCCATGA+AGG | - | chr4.2:37401995-37402014 | None:intergenic | 35.0% | |
| GCTACTACTATAATTGTGGT+CGG | + | chr4.2:37400875-37400894 | MS.gene50052:intron | 35.0% | |
| GTGAAGGAATTGCATAGAAT+TGG | - | chr4.2:37400254-37400273 | None:intergenic | 35.0% | |
| GTGATGCTACTCAAATACAA+AGG | - | chr4.2:37404024-37404043 | None:intergenic | 35.0% | |
| GTGGTCGGATATGTAATTAA+GGG | + | chr4.2:37400890-37400909 | MS.gene50052:intron | 35.0% | |
| GTTGGTTGAATTTGTAGTGT+TGG | + | chr4.2:37400947-37400966 | MS.gene50052:intron | 35.0% | |
| TAAGGTTCCAGATATCTATG+GGG | + | chr4.2:37403833-37403852 | MS.gene50052:CDS | 35.0% | |
| TATCATACTCCACTTTGAAC+TGG | - | chr4.2:37403863-37403882 | None:intergenic | 35.0% | |
| TCACATTAGAACTTCTCTTC+AGG | + | chr4.2:37404040-37404059 | MS.gene50052:intron | 35.0% | |
| TCGTATTCATTGTGTCTGAA+AGG | - | chr4.2:37404421-37404440 | None:intergenic | 35.0% | |
| TCTTCCCAGTAAAAAGAAGA+AGG | - | chr4.2:37404667-37404686 | None:intergenic | 35.0% | |
| TCTTGACTGAAGTTAGCAAA+TGG | + | chr4.2:37403263-37403282 | MS.gene50052:CDS | 35.0% | |
| TGTGGTCGGATATGTAATTA+AGG | + | chr4.2:37400889-37400908 | MS.gene50052:intron | 35.0% | |
| TTCAAATCTCTTCAATCTCG+TGG | + | chr4.2:37400350-37400369 | MS.gene50052:CDS | 35.0% | |
| TTCCCAGTAAAAAGAAGAAG+GGG | - | chr4.2:37404665-37404684 | None:intergenic | 35.0% | |
| TTGAGATTTATGAGTGGTCT+GGG | + | chr4.2:37403608-37403627 | MS.gene50052:CDS | 35.0% | |
| ! | AAAGGGGTTGAATTTTTGTG+AGG | - | chr4.2:37403984-37404003 | None:intergenic | 35.0% |
| ! | ACAATGCATCTGATTTGATC+AGG | + | chr4.2:37400719-37400738 | MS.gene50052:CDS | 35.0% |
| ! | AGATTTGAAGTAGAGAGAGT+GGG | - | chr4.2:37400339-37400358 | None:intergenic | 35.0% |
| ! | CAATGCATCTGATTTGATCA+GGG | + | chr4.2:37400720-37400739 | MS.gene50052:CDS | 35.0% |
| ! | TAATGAGTTGGATCAAGACA+TGG | + | chr4.2:37402885-37402904 | MS.gene50052:intron | 35.0% |
| ! | TCTAAACCCATAAAGGTGTA+GGG | - | chr4.2:37404112-37404131 | None:intergenic | 35.0% |
| ! | TTCTAAACCCATAAAGGTGT+AGG | - | chr4.2:37404113-37404132 | None:intergenic | 35.0% |
| !! | AATTGATGCTGCTGCTATTT+TGG | + | chr4.2:37400654-37400673 | MS.gene50052:CDS | 35.0% |
| !! | GGAGTATGTTTTTGTGTATC+TGG | + | chr4.2:37402288-37402307 | MS.gene50052:intron | 35.0% |
| !!! | TCTCGCTTTTGAAATATGCA+TGG | + | chr4.2:37401921-37401940 | MS.gene50052:intron | 35.0% |
| !!! | TTTTTTGGGTTGTGATGTGT+AGG | + | chr4.2:37400619-37400638 | MS.gene50052:intron | 35.0% |
| AAAATCGCGCTTCAGAGATA+CGG | + | chr4.2:37400407-37400426 | MS.gene50052:CDS | 40.0% | |
| AACAACAGACATGACAAGTC+AGG | + | chr4.2:37403229-37403248 | MS.gene50052:intron | 40.0% | |
| AATCAATGTGTGATCCCCTT+CGG | - | chr4.2:37401330-37401349 | None:intergenic | 40.0% | |
| AATGCTCGGATATTGATCTC+TGG | + | chr4.2:37402500-37402519 | MS.gene50052:CDS | 40.0% | |
| AATGTGCAACACCACAAAGT+TGG | + | chr4.2:37403437-37403456 | MS.gene50052:CDS | 40.0% | |
| AGGTTGACAGAAAAAGCTGT+AGG | - | chr4.2:37401741-37401760 | None:intergenic | 40.0% | |
| ATCAAGTGAGTCTTCCATAC+CGG | - | chr4.2:37402547-37402566 | None:intergenic | 40.0% | |
| ATGTGCAACACCACAAAGTT+GGG | + | chr4.2:37403438-37403457 | MS.gene50052:CDS | 40.0% | |
| ATTGAAGATCCAAGGAGTGA+TGG | - | chr4.2:37401786-37401805 | None:intergenic | 40.0% | |
| CAATATCTCTCTCACACTCT+AGG | + | chr4.2:37403141-37403160 | MS.gene50052:intron | 40.0% | |
| CAGCGAGAAAAGTTCAAACT+AGG | - | chr4.2:37401887-37401906 | None:intergenic | 40.0% | |
| CGAAACTCACGTTCAATTGT+TGG | - | chr4.2:37400467-37400486 | None:intergenic | 40.0% | |
| CTAGAGTGTGAGAGAGATAT+TGG | - | chr4.2:37403143-37403162 | None:intergenic | 40.0% | |
| CTGTTGTACGTAACGAGAAA+AGG | - | chr4.2:37401537-37401556 | None:intergenic | 40.0% | |
| GAAAATGCTGCTCCATAGTA+GGG | - | chr4.2:37404466-37404485 | None:intergenic | 40.0% | |
| GGATTGCATGTTCTCTTTCA+GGG | + | chr4.2:37403792-37403811 | MS.gene50052:intron | 40.0% | |
| GTTGAGATTTATGAGTGGTC+TGG | + | chr4.2:37403607-37403626 | MS.gene50052:CDS | 40.0% | |
| TAACACTTCACTCACTTGGT+TGG | - | chr4.2:37402686-37402705 | None:intergenic | 40.0% | |
| TAATGAGTTCGATCGAGACA+TGG | + | chr4.2:37402816-37402835 | MS.gene50052:intron | 40.0% | |
| TCCCAGTAAAAAGAAGAAGG+GGG | - | chr4.2:37404664-37404683 | None:intergenic | 40.0% | |
| TCGTTGATCCTATAGATGGA+TGG | - | chr4.2:37403476-37403495 | None:intergenic | 40.0% | |
| TGAAAATGCTGCTCCATAGT+AGG | - | chr4.2:37404467-37404486 | None:intergenic | 40.0% | |
| TGAACATCATCAGCCACATA+AGG | - | chr4.2:37403646-37403665 | None:intergenic | 40.0% | |
| TGGAAAACCCCATAGATATC+TGG | - | chr4.2:37403843-37403862 | None:intergenic | 40.0% | |
| TTTATTGTGATGCAGATGGC+AGG | + | chr4.2:37404760-37404779 | MS.gene50052:intron | 40.0% | |
| ! | AAGCTAGCTTATAGCTGACA+GGG | + | chr4.2:37400915-37400934 | MS.gene50052:intron | 40.0% |
| ! | AGAGAGATATTGGCTAGTGT+AGG | - | chr4.2:37403133-37403152 | None:intergenic | 40.0% |
| ! | CATTAGTTTCCCCAACTTTG+TGG | - | chr4.2:37403451-37403470 | None:intergenic | 40.0% |
| ! | CCAATTCCTTGGAAAAGTAC+TGG | - | chr4.2:37401563-37401582 | None:intergenic | 40.0% |
| ! | CCAGTACTTTTCCAAGGAAT+TGG | + | chr4.2:37401560-37401579 | MS.gene50052:CDS | 40.0% |
| ! | CTATGGAGCAGCATTTTCAA+TGG | + | chr4.2:37404468-37404487 | MS.gene50052:CDS | 40.0% |
| ! | CTTTTCTCGTTACGTACAAC+AGG | + | chr4.2:37401535-37401554 | MS.gene50052:intron | 40.0% |
| ! | GAGATTTGAAGTAGAGAGAG+TGG | - | chr4.2:37400340-37400359 | None:intergenic | 40.0% |
| ! | TAAGCTAGCTTATAGCTGAC+AGG | + | chr4.2:37400914-37400933 | MS.gene50052:intron | 40.0% |
| ! | TCACTTGATCTTGTTAGCCT+GGG | + | chr4.2:37402558-37402577 | MS.gene50052:intron | 40.0% |
| !! | AAATGGGTTTTCCACGAAAG+AGG | + | chr4.2:37403280-37403299 | MS.gene50052:CDS | 40.0% |
| !! | TTGTGATGTGTAGGTTTTGG+AGG | + | chr4.2:37400628-37400647 | MS.gene50052:intron | 40.0% |
| !!! | TATCTCTGAAGCGCGATTTT+GGG | - | chr4.2:37400407-37400426 | None:intergenic | 40.0% |
| AACCACAGCACCATAATCCT+AGG | - | chr4.2:37401276-37401295 | None:intergenic | 45.0% | |
| AATTCAGGTGTGCAGAAAGC+TGG | + | chr4.2:37402656-37402675 | MS.gene50052:CDS | 45.0% | |
| AATTGCTACTGAGTGTGGAG+TGG | + | chr4.2:37400744-37400763 | MS.gene50052:CDS | 45.0% | |
| ACAAACGCCCTACACCTTTA+TGG | + | chr4.2:37404102-37404121 | MS.gene50052:intron | 45.0% | |
| ACACATAAGAGGGGTCTGTT+TGG | - | chr4.2:37401234-37401253 | None:intergenic | 45.0% | |
| ACATTCAAAACGCTTAGGGG+AGG | + | chr4.2:37404565-37404584 | MS.gene50052:intron | 45.0% | |
| AGCTCTTGGCACAAGTCTTA+AGG | - | chr4.2:37402242-37402261 | None:intergenic | 45.0% | |
| AGGGAAATTGCTACTGAGTG+TGG | + | chr4.2:37400739-37400758 | MS.gene50052:CDS | 45.0% | |
| ATGCAGTCTCTTCTACCGAA+GGG | + | chr4.2:37401312-37401331 | MS.gene50052:CDS | 45.0% | |
| ATTGGCTAGTGTAGGTGGAT+TGG | - | chr4.2:37403125-37403144 | None:intergenic | 45.0% | |
| CAAACGCCCTACACCTTTAT+GGG | + | chr4.2:37404103-37404122 | MS.gene50052:intron | 45.0% | |
| CAATGGCACACATACACAGT+AGG | - | chr4.2:37401851-37401870 | None:intergenic | 45.0% | |
| CATTCAAAACGCTTAGGGGA+GGG | + | chr4.2:37404566-37404585 | MS.gene50052:intron | 45.0% | |
| CATTGAGCATGTTCAGCAAC+CGG | + | chr4.2:37402525-37402544 | MS.gene50052:CDS | 45.0% | |
| CCCAGTAAAAAGAAGAAGGG+GGG | - | chr4.2:37404663-37404682 | None:intergenic | 45.0% | |
| CGAAGTCATCGAGTAAGACA+AGG | - | chr4.2:37400304-37400323 | None:intergenic | 45.0% | |
| CGTCGATCTGAAGGTTTATC+GGG | - | chr4.2:37400278-37400297 | None:intergenic | 45.0% | |
| CTCACTTGATCTTGTTAGCC+TGG | + | chr4.2:37402557-37402576 | MS.gene50052:intron | 45.0% | |
| CTGACAGGGGATAAGATAGT+TGG | + | chr4.2:37400929-37400948 | MS.gene50052:intron | 45.0% | |
| GACAACATGGGAACCTTATG+TGG | + | chr4.2:37403630-37403649 | MS.gene50052:CDS | 45.0% | |
| GAGAGAGTGGGAAGATTTGA+TGG | - | chr4.2:37400327-37400346 | None:intergenic | 45.0% | |
| GATAGCCTAAGTAGCAACTC+CGG | - | chr4.2:37403049-37403068 | None:intergenic | 45.0% | |
| GCCAAATCTTGAGAACTCCA+TGG | + | chr4.2:37404719-37404738 | MS.gene50052:intron | 45.0% | |
| GCCATGGAGTTCTCAAGATT+TGG | - | chr4.2:37404723-37404742 | None:intergenic | 45.0% | |
| GGGATTGCATGTTCTCTTTC+AGG | + | chr4.2:37403791-37403810 | MS.gene50052:intron | 45.0% | |
| GTCAGGCGAGAAATAATGCT+CGG | + | chr4.2:37402486-37402505 | MS.gene50052:intron | 45.0% | |
| GTGATGCAATGCAATGTGCT+TGG | + | chr4.2:37400853-37400872 | MS.gene50052:intron | 45.0% | |
| TATGCAGTCTCTTCTACCGA+AGG | + | chr4.2:37401311-37401330 | MS.gene50052:CDS | 45.0% | |
| TGAAGGTTTATCGGGAGTGA+AGG | - | chr4.2:37400270-37400289 | None:intergenic | 45.0% | |
| TGCTCCATAGTAGGGATAAG+CGG | - | chr4.2:37404458-37404477 | None:intergenic | 45.0% | |
| TGTGCAACACCACAAAGTTG+GGG | + | chr4.2:37403439-37403458 | MS.gene50052:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4.2:37402954-37402973 | None:intergenic | 45.0% |
| ! | AGCTAGCTTATAGCTGACAG+GGG | + | chr4.2:37400916-37400935 | MS.gene50052:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4.2:37402955-37402974 | None:intergenic | 45.0% |
| ! | CCCCCCTTCTTCTTTTTACT+GGG | + | chr4.2:37404660-37404679 | MS.gene50052:intron | 45.0% |
| ! | GAGATATTGGCTAGTGTAGG+TGG | - | chr4.2:37403130-37403149 | None:intergenic | 45.0% |
| ! | GCGTCGATCTGAAGGTTTAT+CGG | - | chr4.2:37400279-37400298 | None:intergenic | 45.0% |
| ! | GGGTTGTGATGTGTAGGTTT+TGG | + | chr4.2:37400625-37400644 | MS.gene50052:intron | 45.0% |
| ! | TGGGGTTTTCCAGTTCAAAG+TGG | + | chr4.2:37403851-37403870 | MS.gene50052:CDS | 45.0% |
| ! | TTCCTAGGATTATGGTGCTG+TGG | + | chr4.2:37401271-37401290 | MS.gene50052:intron | 45.0% |
| !!! | ATCTCTGAAGCGCGATTTTG+GGG | - | chr4.2:37400406-37400425 | None:intergenic | 45.0% |
| !!! | GTATCTCTGAAGCGCGATTT+TGG | - | chr4.2:37400408-37400427 | None:intergenic | 45.0% |
| ACAAGTCCTCCATCACTCCT+TGG | + | chr4.2:37401774-37401793 | MS.gene50052:CDS | 50.0% | |
| AGCATGTTCAGCAACCGGTA+TGG | + | chr4.2:37402530-37402549 | MS.gene50052:intron | 50.0% | |
| AGGACGGACAGGAATCTACA+AGG | - | chr4.2:37404401-37404420 | None:intergenic | 50.0% | |
| CATAGTAGGGATAAGCGGCT+GGG | - | chr4.2:37404453-37404472 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4.2:37402953-37402972 | MS.gene50052:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4.2:37402950-37402969 | None:intergenic | 50.0% | |
| GAAGATCCAAGGAGTGATGG+AGG | - | chr4.2:37401783-37401802 | None:intergenic | 50.0% | |
| GCTGTGGTTGTAGATCATGC+TGG | + | chr4.2:37401287-37401306 | MS.gene50052:CDS | 50.0% | |
| GGACGGACAGGAATCTACAA+GGG | - | chr4.2:37404400-37404419 | None:intergenic | 50.0% | |
| TGCAGTCTCTTCTACCGAAG+GGG | + | chr4.2:37401313-37401332 | MS.gene50052:CDS | 50.0% | |
| TGGCACACATACACAGTAGG+AGG | - | chr4.2:37401848-37401867 | None:intergenic | 50.0% | |
| TTGTGTCTGAAAGGACGGAC+AGG | - | chr4.2:37404412-37404431 | None:intergenic | 50.0% | |
| ! | ACAAGGATGCGTCGATCTGA+AGG | - | chr4.2:37400287-37400306 | None:intergenic | 50.0% |
| ! | ATGAGTGGTCTGGGACAACA+TGG | + | chr4.2:37403617-37403636 | MS.gene50052:CDS | 50.0% |
| ! | CAGGCTCCAGTACTTTTCCA+AGG | + | chr4.2:37401554-37401573 | MS.gene50052:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4.2:37402956-37402975 | None:intergenic | 50.0% |
| ! | GCCCCCCTTCTTCTTTTTAC+TGG | + | chr4.2:37404659-37404678 | MS.gene50052:intron | 50.0% |
| ! | GTGTGGAGTGGACTTTGATG+AGG | + | chr4.2:37400756-37400775 | MS.gene50052:CDS | 50.0% |
| ! | TGAGTGGTCTGGGACAACAT+GGG | + | chr4.2:37403618-37403637 | MS.gene50052:CDS | 50.0% |
| !! | AGGTACCGGAGTTGCTACTT+AGG | + | chr4.2:37403041-37403060 | MS.gene50052:intron | 50.0% |
| CCACGAAAGAGGTCACCTCA+AGG | + | chr4.2:37403291-37403310 | MS.gene50052:CDS | 55.0% | |
| CCAGCCGCTTATCCCTACTA+TGG | + | chr4.2:37404451-37404470 | MS.gene50052:CDS | 55.0% | |
| CCATAGTAGGGATAAGCGGC+TGG | - | chr4.2:37404454-37404473 | None:intergenic | 55.0% | |
| CCTTGAGGTGACCTCTTTCG+TGG | - | chr4.2:37403294-37403313 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4.2:37402948-37402967 | MS.gene50052:intron | 55.0% | |
| CGCTTAGGGGAGGGAAAACT+CGG | + | chr4.2:37404575-37404594 | MS.gene50052:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTGCA+TGG | - | chr4.2:37402942-37402961 | None:intergenic | 60.0% | |
| ATGCAGCCGACCCCACTTAG+TGG | + | chr4.2:37402941-37402960 | MS.gene50052:intron | 60.0% | |
| TGCAGCCGACCCCACTTAGT+GGG | + | chr4.2:37402942-37402961 | MS.gene50052:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 37400212 | 37404822 | 37400212 | ID=MS.gene50052 |
| chr4.2 | mRNA | 37400212 | 37404822 | 37400212 | ID=MS.gene50052.t1;Parent=MS.gene50052 |
| chr4.2 | exon | 37400212 | 37400476 | 37400212 | ID=MS.gene50052.t1.exon1;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37400212 | 37400476 | 37400212 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37400641 | 37400777 | 37400641 | ID=MS.gene50052.t1.exon2;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37400641 | 37400777 | 37400641 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37401278 | 37401403 | 37401278 | ID=MS.gene50052.t1.exon3;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37401278 | 37401403 | 37401278 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37401557 | 37401610 | 37401557 | ID=MS.gene50052.t1.exon4;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37401557 | 37401610 | 37401557 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37401714 | 37401827 | 37401714 | ID=MS.gene50052.t1.exon5;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37401714 | 37401827 | 37401714 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37402491 | 37402546 | 37402491 | ID=MS.gene50052.t1.exon6;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37402491 | 37402546 | 37402491 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37402649 | 37402690 | 37402649 | ID=MS.gene50052.t1.exon7;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37402649 | 37402690 | 37402649 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37403237 | 37403312 | 37403237 | ID=MS.gene50052.t1.exon8;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37403237 | 37403312 | 37403237 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37403431 | 37403502 | 37403431 | ID=MS.gene50052.t1.exon9;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37403431 | 37403502 | 37403431 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37403598 | 37403723 | 37403598 | ID=MS.gene50052.t1.exon10;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37403598 | 37403723 | 37403598 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37403813 | 37403917 | 37403813 | ID=MS.gene50052.t1.exon11;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37403813 | 37403917 | 37403813 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37404406 | 37404489 | 37404406 | ID=MS.gene50052.t1.exon12;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37404406 | 37404489 | 37404406 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| chr4.2 | exon | 37404775 | 37404822 | 37404775 | ID=MS.gene50052.t1.exon13;Parent=MS.gene50052.t1 |
| chr4.2 | CDS | 37404775 | 37404822 | 37404775 | ID=cds.MS.gene50052.t1;Parent=MS.gene50052.t1 |
| Gene Sequence |
| Protein sequence |
