Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50636.t1 | XP_013468491.1 | 99.4 | 157 | 1 | 0 | 1 | 157 | 1 | 157 | 1.70E-78 | 303.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50636.t1 | O23174 | 70.8 | 144 | 34 | 1 | 220 | 355 | 214 | 357 | 1.1e-51 | 205.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50636.t1 | I3SAI9 | 99.4 | 157 | 1 | 0 | 1 | 157 | 1 | 157 | 1.2e-78 | 303.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene50636 | 0.810955 | 8.91E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene50636 | 0.806085 | 9.76E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene50636 | 0.834418 | 3.03E-56 | -1.69E-46 |
| MS.gene051247 | MS.gene50636 | 0.802639 | 5.10E-49 | -1.69E-46 |
| MS.gene051757 | MS.gene50636 | 0.813037 | 3.14E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene50636 | 0.811849 | 5.70E-51 | -1.69E-46 |
| MS.gene052335 | MS.gene50636 | 0.812822 | 3.49E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene50636 | 0.802562 | 5.29E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene50636 | 0.805836 | 1.10E-49 | -1.69E-46 |
| MS.gene055468 | MS.gene50636 | 0.814943 | 1.19E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene50636 | 0.801625 | 8.24E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene50636 | 0.813429 | 2.57E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene50636 | 0.804447 | 2.15E-49 | -1.69E-46 |
| MS.gene056390 | MS.gene50636 | 0.80545 | 1.33E-49 | -1.69E-46 |
| MS.gene056522 | MS.gene50636 | -0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene50636 | 0.801487 | 8.80E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene50636 | 0.812837 | 3.47E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene50636 | 0.821972 | 3.04E-53 | -1.69E-46 |
| MS.gene058639 | MS.gene50636 | 0.805867 | 1.08E-49 | -1.69E-46 |
| MS.gene058758 | MS.gene50636 | 0.814667 | 1.37E-51 | -1.69E-46 |
| MS.gene058852 | MS.gene50636 | 0.807463 | 4.99E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene50636 | 0.812876 | 3.40E-51 | -1.69E-46 |
| MS.gene059227 | MS.gene50636 | 0.811171 | 8.00E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene50636 | 0.806751 | 7.07E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50636.t1 | MTR_1g069925 | 100.000 | 157 | 0 | 0 | 1 | 157 | 1 | 157 | 3.73e-112 | 323 |
| MS.gene50636.t1 | MTR_7g096940 | 70.408 | 196 | 36 | 2 | 183 | 356 | 161 | 356 | 1.28e-81 | 258 |
| MS.gene50636.t1 | MTR_1g085510 | 61.307 | 199 | 57 | 2 | 178 | 356 | 153 | 351 | 2.45e-62 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50636.t1 | AT4G37120 | 65.482 | 197 | 44 | 3 | 183 | 355 | 161 | 357 | 2.15e-75 | 242 |
| MS.gene50636.t1 | AT1G65660 | 63.366 | 202 | 50 | 3 | 178 | 355 | 156 | 357 | 6.69e-75 | 241 |
| MS.gene50636.t1 | AT3G45950 | 55.051 | 198 | 63 | 3 | 178 | 355 | 156 | 347 | 5.26e-62 | 203 |
| MS.gene50636.t1 | AT4G14385 | 68.056 | 144 | 40 | 2 | 3 | 143 | 2 | 142 | 5.93e-55 | 177 |
| MS.gene50636.t1 | AT4G14385 | 72.807 | 114 | 31 | 0 | 3 | 116 | 2 | 115 | 1.52e-48 | 161 |
| MS.gene50636.t1 | AT4G14385 | 72.000 | 100 | 28 | 0 | 3 | 102 | 2 | 101 | 5.00e-39 | 135 |
| MS.gene50636.t1 | AT4G14385 | 72.000 | 100 | 28 | 0 | 3 | 102 | 2 | 101 | 5.00e-39 | 135 |
| MS.gene50636.t1 | AT4G14385 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 1.09e-33 | 121 |
| MS.gene50636.t1 | AT4G14385 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 1.09e-33 | 121 |
| MS.gene50636.t1 | AT4G14385 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 1.09e-33 | 121 |
| MS.gene50636.t1 | AT4G14385 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 1.09e-33 | 121 |
| MS.gene50636.t1 | AT4G14385 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 1.09e-33 | 121 |
Find 79 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATGAAGGAATCTATTT+TGG | 0.164991 | 1.2:-53193014 | MS.gene50636:CDS |
| GGGAAGTCAGCTTAAGAAAT+TGG | 0.250207 | 1.2:-53193682 | MS.gene50636:CDS |
| TATGGAAACAAGTTATTTAC+AGG | 0.281655 | 1.2:-53196775 | MS.gene50636:CDS |
| TCTTCAGGAACCTGCGTATT+CGG | 0.286851 | 1.2:-53193435 | MS.gene50636:intron |
| CTCGACACAGGTTTATGATA+TGG | 0.290750 | 1.2:-53196793 | MS.gene50636:intron |
| ACGAAGCTCTTCATGAAGTT+TGG | 0.303537 | 1.2:+53197229 | None:intergenic |
| AGCTCGAAAGAAATTCTTAA+AGG | 0.318746 | 1.2:-53193703 | MS.gene50636:CDS |
| CTGATGACAAAGATGATCTA+AGG | 0.320659 | 1.2:-53193626 | MS.gene50636:CDS |
| CTTGCTCTCTTCGCATCTCT+TGG | 0.327976 | 1.2:+53194731 | None:intergenic |
| ACAGTGTGGCAATGTATTAA+AGG | 0.345831 | 1.2:-53196745 | MS.gene50636:CDS |
| ACCTCATACAGCTTCTCATT+TGG | 0.350359 | 1.2:+53193313 | None:intergenic |
| GGCGCACCTCTTCCTTTCTT+CGG | 0.350577 | 1.2:+53194752 | None:intergenic |
| CTTGACCACTATTCCTATAC+TGG | 0.354574 | 1.2:+53193173 | None:intergenic |
| CTTCAGGAACCTGCGTATTC+GGG | 0.356203 | 1.2:-53193434 | MS.gene50636:intron |
| TCAGATGGGAGATCAGATTT+TGG | 0.357334 | 1.2:-53194967 | MS.gene50636:intron |
| TGACCTAACAAAAGTTATCT+TGG | 0.364919 | 1.2:+53192956 | None:intergenic |
| TTTCTTTCGAGCTTCATCTA+TGG | 0.369260 | 1.2:+53193713 | None:intergenic |
| GGTGGAACAATTTATGCAAA+TGG | 0.372296 | 1.2:-53194928 | MS.gene50636:CDS |
| AATGTATTAAAGGGATTTGA+AGG | 0.395885 | 1.2:-53196735 | MS.gene50636:CDS |
| TACATTGAAAGCATTTGATA+AGG | 0.402696 | 1.2:-53193122 | MS.gene50636:CDS |
| TTGCCACATCCTCACCAGTT+TGG | 0.403072 | 1.2:+53193649 | None:intergenic |
| AAGTTGATGTTTACAGTTTG+CGG | 0.409602 | 1.2:-53194385 | MS.gene50636:CDS |
| ACATTGAAAGCATTTGATAA+GGG | 0.418656 | 1.2:-53193121 | MS.gene50636:CDS |
| TAGGAATAGTGGTCAAGCTT+TGG | 0.428800 | 1.2:-53193167 | MS.gene50636:CDS |
| TAATGAAAAGAGCCTGTCTT+CGG | 0.428840 | 1.2:+53196008 | None:intergenic |
| TTGGAGAAGAACAGCCAAAC+TGG | 0.430169 | 1.2:-53193663 | MS.gene50636:CDS |
| TGGTCAAGCTTTGGAATTCA+AGG | 0.431984 | 1.2:-53193158 | MS.gene50636:CDS |
| GCTCGAAAGAAATTCTTAAA+GGG | 0.445837 | 1.2:-53193702 | MS.gene50636:CDS |
| TTTGGTCCTGGTCGATCAAA+AGG | 0.448086 | 1.2:-53194949 | MS.gene50636:CDS |
| TTCACGCATTGACCTAGTCT+TGG | 0.450301 | 1.2:+53193357 | None:intergenic |
| AATGAAAAGAGCCTGTCTTC+GGG | 0.452201 | 1.2:+53196009 | None:intergenic |
| TTCAATCACAATGTCATGTC+AGG | 0.452440 | 1.2:+53194671 | None:intergenic |
| CAGTGTGGCAATGTATTAAA+GGG | 0.460090 | 1.2:-53196744 | MS.gene50636:CDS |
| TCACGCATTGACCTAGTCTT+GGG | 0.466349 | 1.2:+53193358 | None:intergenic |
| ACAAAAGTTATCTTGGAAGT+TGG | 0.469215 | 1.2:+53192963 | None:intergenic |
| ACAAGTTATTTACAGGATCC+TGG | 0.477906 | 1.2:-53196768 | MS.gene50636:CDS |
| GTGGAACAATTTATGCAAAT+GGG | 0.480539 | 1.2:-53194927 | MS.gene50636:CDS |
| GCTTCGTAATATTGAAAAGC+AGG | 0.480561 | 1.2:-53197213 | MS.gene50636:intron |
| ATGAGAGTACAGGAACTGTT+AGG | 0.482959 | 1.2:-53193584 | MS.gene50636:intron |
| TTTGGATCTGCAACTGAAAG+AGG | 0.484297 | 1.2:+53193331 | None:intergenic |
| CAGCCAAACTGGTGAGGATG+TGG | 0.487942 | 1.2:-53193652 | MS.gene50636:CDS |
| AATAGGGCGATAACCAGTAT+AGG | 0.499353 | 1.2:-53193186 | MS.gene50636:intron |
| CATCTCCGTCTCAAGCTGAA+TGG | 0.506420 | 1.2:-53193078 | MS.gene50636:CDS |
| GAAACTGAAGTCTCAAATGA+AGG | 0.508211 | 1.2:-53193026 | MS.gene50636:CDS |
| CAAGAGATGCGAAGAGAGCA+AGG | 0.508415 | 1.2:-53194730 | MS.gene50636:CDS |
| AATACATTGCCACACTGTCC+AGG | 0.510409 | 1.2:+53196750 | None:intergenic |
| GATAACCAGTATAGGAATAG+TGG | 0.512770 | 1.2:-53193178 | MS.gene50636:CDS |
| TAGGCAGAAGAGCTTGCAGC+TGG | 0.517903 | 1.2:-53195082 | MS.gene50636:CDS |
| GAAAGTTTCAGCCCGAAGAC+AGG | 0.522864 | 1.2:-53196020 | MS.gene50636:CDS |
| TCCAAATGAGAAGCTGTATG+AGG | 0.538837 | 1.2:-53193314 | MS.gene50636:intron |
| GGTGAACCCTTCAGCAATGT+TGG | 0.540152 | 1.2:-53197273 | MS.gene50636:CDS |
| CAGTGTTCTTTGTTGACGAT+AGG | 0.542807 | 1.2:+53196709 | None:intergenic |
| TTTGGCTCTTCTACTAAGCA+AGG | 0.544435 | 1.2:+53197247 | None:intergenic |
| AAGTATGGAAATGCAGCTGA+TGG | 0.546225 | 1.2:-53192989 | MS.gene50636:CDS |
| TATAGGGGTAAACCGAAGAA+AGG | 0.552151 | 1.2:-53194764 | MS.gene50636:intron |
| AAACATCAACTTCTACAAGT+TGG | 0.554678 | 1.2:+53194396 | None:intergenic |
| CATTGAAAGCATTTGATAAG+GGG | 0.558758 | 1.2:-53193120 | MS.gene50636:CDS |
| GAGCTTGCAGCTGGACGAGA+CGG | 0.560192 | 1.2:-53195073 | MS.gene50636:intron |
| AGTATGGAAATGCAGCTGAT+GGG | 0.560945 | 1.2:-53192988 | MS.gene50636:CDS |
| AAGGAAGCCAACATTGCTGA+AGG | 0.567280 | 1.2:+53197266 | None:intergenic |
| AGATGATCTAAGGGTTGATG+AGG | 0.581075 | 1.2:-53193616 | MS.gene50636:CDS |
| GCAAAGGTTGATGAGAGTAC+AGG | 0.581822 | 1.2:-53193594 | MS.gene50636:CDS |
| TCAGAAACACACCGCTGGCG+AGG | 0.588747 | 1.2:+53195975 | None:intergenic |
| TGATGACAAAGATGATCTAA+GGG | 0.593033 | 1.2:-53193625 | MS.gene50636:CDS |
| GTATGGAAATGCAGCTGATG+GGG | 0.599243 | 1.2:-53192987 | MS.gene50636:CDS |
| ATGTATTAAAGGGATTTGAA+GGG | 0.608853 | 1.2:-53196734 | MS.gene50636:CDS |
| TAAAGCCATTCAGCTTGAGA+CGG | 0.611900 | 1.2:+53193073 | None:intergenic |
| TCTAAGGGTTGATGAGGCAA+AGG | 0.615496 | 1.2:-53193610 | MS.gene50636:CDS |
| GGTAAACCGAAGAAAGGAAG+AGG | 0.619973 | 1.2:-53194758 | MS.gene50636:CDS |
| CACACTACGATCCCAAGACT+AGG | 0.621412 | 1.2:-53193369 | MS.gene50636:CDS |
| ATCTTCAGTGACCTCGCCAG+CGG | 0.629189 | 1.2:-53195986 | MS.gene50636:intron |
| GGTCCTGGTCGATCAAAAGG+TGG | 0.634647 | 1.2:-53194946 | MS.gene50636:CDS |
| CAGTGTCCTCCCGAATACGC+AGG | 0.634957 | 1.2:+53193425 | None:intergenic |
| CAGGAACCTGCGTATTCGGG+AGG | 0.635060 | 1.2:-53193431 | MS.gene50636:CDS |
| GAAGAACAGCCAAACTGGTG+AGG | 0.635287 | 1.2:-53193658 | MS.gene50636:CDS |
| AAGAGATGCGAAGAGAGCAA+GGG | 0.657814 | 1.2:-53194729 | MS.gene50636:CDS |
| AGGAAGCCAACATTGCTGAA+GGG | 0.663989 | 1.2:+53197267 | None:intergenic |
| TTACAGGATCCTGGACAGTG+TGG | 0.680227 | 1.2:-53196759 | MS.gene50636:CDS |
| TCCTTGAAAATGGAATCCGA+AGG | 0.698033 | 1.2:-53197404 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTATATTAATTTTT+AGG | - | chr1.2:53193057-53193076 | MS.gene50636:CDS | 0.0% |
| !!! | AATAACTATATATTTTTACA+TGG | + | chr1.2:53194208-53194227 | None:intergenic | 10.0% |
| !!! | AATTATTTTGAATTTTCATT+TGG | - | chr1.2:53193250-53193269 | MS.gene50636:intron | 10.0% |
| !!! | ACAATCATTTTTTTTTAATA+AGG | + | chr1.2:53196533-53196552 | None:intergenic | 10.0% |
| !!! | ATCATTTTTAATTAAAAATG+TGG | - | chr1.2:53196443-53196462 | MS.gene50636:intron | 10.0% |
| !!! | ATTATTTTGAATTTTCATTT+GGG | - | chr1.2:53193251-53193270 | MS.gene50636:intron | 10.0% |
| !!! | CAATCATTTTTTTTTAATAA+GGG | + | chr1.2:53196532-53196551 | None:intergenic | 10.0% |
| !! | AATACAATTTAACCTTAAAT+TGG | - | chr1.2:53193500-53193519 | MS.gene50636:intron | 15.0% |
| !! | AATCACAAATCATATTTATT+AGG | - | chr1.2:53193918-53193937 | MS.gene50636:intron | 15.0% |
| !! | ATACAATTTAACCTTAAATT+GGG | - | chr1.2:53193501-53193520 | MS.gene50636:intron | 15.0% |
| !! | GTCATTATTAGAAATAATTA+TGG | - | chr1.2:53195076-53195095 | MS.gene50636:CDS | 15.0% |
| !! | TAAAAAAAAATGATTGTTTG+TGG | - | chr1.2:53196536-53196555 | MS.gene50636:intron | 15.0% |
| !!! | AGTTGTATATTATTGTTTTT+CGG | - | chr1.2:53196238-53196257 | MS.gene50636:intron | 15.0% |
| !!! | ATATCTTTTTATCTAATTCT+GGG | + | chr1.2:53194436-53194455 | None:intergenic | 15.0% |
| !!! | ATTCTTTTGTAATTTCAATT+TGG | - | chr1.2:53193018-53193037 | MS.gene50636:CDS | 15.0% |
| !!! | TAACTTTATTGTTTTTGAAT+TGG | - | chr1.2:53195486-53195505 | MS.gene50636:intron | 15.0% |
| !!! | TATATCTTTTTATCTAATTC+TGG | + | chr1.2:53194437-53194456 | None:intergenic | 15.0% |
| !!! | TCTTTTATTTCTAAAAATTG+TGG | - | chr1.2:53196573-53196592 | MS.gene50636:intron | 15.0% |
| !!! | TGAATCTATTTTTTTTTTGT+TGG | - | chr1.2:53194305-53194324 | MS.gene50636:intron | 15.0% |
| !!! | TTATAAGAATTTTAAGATCA+TGG | - | chr1.2:53197312-53197331 | MS.gene50636:intron | 15.0% |
| !! | AAAAATCATCATGTTACTAT+AGG | - | chr1.2:53195584-53195603 | MS.gene50636:intron | 20.0% |
| !! | AAAATCATCATGTTACTATA+GGG | - | chr1.2:53195585-53195604 | MS.gene50636:intron | 20.0% |
| !! | AGCATTATTTAAATAATGCA+GGG | - | chr1.2:53196817-53196836 | MS.gene50636:intron | 20.0% |
| !! | CCATAAATGAATAAAAATCA+TGG | + | chr1.2:53193960-53193979 | None:intergenic | 20.0% |
| !! | CTCAATATTACTTATTAAGT+TGG | - | chr1.2:53196273-53196292 | MS.gene50636:intron | 20.0% |
| !! | GTGTTTGAATTAATAAGAAA+AGG | - | chr1.2:53194113-53194132 | MS.gene50636:intron | 20.0% |
| !! | TAAACAGAATTGACAATAAA+AGG | + | chr1.2:53195180-53195199 | None:intergenic | 20.0% |
| !! | TACATAATTATCCAACTTAA+AGG | + | chr1.2:53196857-53196876 | None:intergenic | 20.0% |
| !! | TAGCATTATTTAAATAATGC+AGG | - | chr1.2:53196816-53196835 | MS.gene50636:intron | 20.0% |
| !! | TGCGGTTATTAATTTATATT+TGG | + | chr1.2:53194806-53194825 | None:intergenic | 20.0% |
| !!! | AAATGTTTTTTTTCTTTCCA+AGG | + | chr1.2:53196034-53196053 | None:intergenic | 20.0% |
| !!! | AATCTTACTAAGATTTTAGA+TGG | - | chr1.2:53194081-53194100 | MS.gene50636:intron | 20.0% |
| !!! | AATTTTAATCCATTTGAAAC+AGG | - | chr1.2:53194759-53194778 | MS.gene50636:CDS | 20.0% |
| !!! | AGTTTTAGCAAATATAAATC+TGG | + | chr1.2:53195007-53195026 | None:intergenic | 20.0% |
| !!! | ATAGAACATTTTCACTTTAT+TGG | + | chr1.2:53196059-53196078 | None:intergenic | 20.0% |
| !!! | ATTTTTATTCATTTATGGTC+AGG | - | chr1.2:53193962-53193981 | MS.gene50636:intron | 20.0% |
| !!! | CCATGATTTTTATTCATTTA+TGG | - | chr1.2:53193957-53193976 | MS.gene50636:intron | 20.0% |
| !!! | GATTAAATTTTCAATGCAAT+AGG | - | chr1.2:53193465-53193484 | MS.gene50636:intron | 20.0% |
| !!! | GTTGTATATTATTGTTTTTC+GGG | - | chr1.2:53196239-53196258 | MS.gene50636:intron | 20.0% |
| !!! | TAGAACATTTTCACTTTATT+GGG | + | chr1.2:53196058-53196077 | None:intergenic | 20.0% |
| !!! | TCTTTTATTTTAAACAACTG+TGG | + | chr1.2:53196621-53196640 | None:intergenic | 20.0% |
| !!! | TGTTTCAAATGGATTAAAAT+TGG | + | chr1.2:53194760-53194779 | None:intergenic | 20.0% |
| !!! | TTATATTTGCTAAAACTTAG+AGG | - | chr1.2:53195010-53195029 | MS.gene50636:intron | 20.0% |
| !!! | TTGATTTAATTTTTGTGATC+CGG | - | chr1.2:53196125-53196144 | MS.gene50636:intron | 20.0% |
| !!! | TTTTACTTGATTCGATATTT+GGG | - | chr1.2:53196170-53196189 | MS.gene50636:intron | 20.0% |
| !!! | TTTTTACTTGATTCGATATT+TGG | - | chr1.2:53196169-53196188 | MS.gene50636:intron | 20.0% |
| ! | AAATCATCATGTTACTATAG+GGG | - | chr1.2:53195586-53195605 | MS.gene50636:intron | 25.0% |
| ! | AATCATATTTATTAGGCATC+TGG | - | chr1.2:53193925-53193944 | MS.gene50636:intron | 25.0% |
| ! | AATGTATTAAAGGGATTTGA+AGG | - | chr1.2:53193630-53193649 | MS.gene50636:CDS | 25.0% |
| ! | AATTAAATGCTTTACATGAG+TGG | - | chr1.2:53194954-53194973 | MS.gene50636:CDS | 25.0% |
| ! | ATATTTCCATTTATCTCAGA+TGG | - | chr1.2:53195383-53195402 | MS.gene50636:intron | 25.0% |
| ! | ATGCTTATTGTACTTGTATT+TGG | - | chr1.2:53197135-53197154 | MS.gene50636:intron | 25.0% |
| ! | ATGTATTAAAGGGATTTGAA+GGG | - | chr1.2:53193631-53193650 | MS.gene50636:CDS | 25.0% |
| ! | CATATGATATAATTGAGTCT+AGG | + | chr1.2:53194843-53194862 | None:intergenic | 25.0% |
| ! | CTTTGTGCAACATAAAAAAT+TGG | - | chr1.2:53195873-53195892 | MS.gene50636:intron | 25.0% |
| ! | GAATTAAGAGTTATTACCTT+CGG | + | chr1.2:53192980-53192999 | None:intergenic | 25.0% |
| ! | GCATTATTTAAATAATGCAG+GGG | - | chr1.2:53196818-53196837 | MS.gene50636:intron | 25.0% |
| ! | TACATATTTGACATGATTTG+CGG | + | chr1.2:53195541-53195560 | None:intergenic | 25.0% |
| ! | TATGGAAACAAGTTATTTAC+AGG | - | chr1.2:53193590-53193609 | MS.gene50636:CDS | 25.0% |
| ! | TATTTCCATTTATCTCAGAT+GGG | - | chr1.2:53195384-53195403 | MS.gene50636:intron | 25.0% |
| ! | TCCTCATTCTATGTATATAT+TGG | - | chr1.2:53195809-53195828 | MS.gene50636:intron | 25.0% |
| ! | TTCAATGCAATAGGATAATT+GGG | - | chr1.2:53193474-53193493 | MS.gene50636:intron | 25.0% |
| ! | TTGACAATAAAAGGCTTAAA+AGG | + | chr1.2:53195171-53195190 | None:intergenic | 25.0% |
| ! | TTGTCAATTCTGTTTAATCA+TGG | - | chr1.2:53195184-53195203 | MS.gene50636:intron | 25.0% |
| ! | TTTCAATGCAATAGGATAAT+TGG | - | chr1.2:53193473-53193492 | MS.gene50636:intron | 25.0% |
| !! | AAAGCATTTAATTTCTCAAC+CGG | + | chr1.2:53194947-53194966 | None:intergenic | 25.0% |
| !! | AATATATGTTTCTGCGTAAT+AGG | - | chr1.2:53197162-53197181 | MS.gene50636:intron | 25.0% |
| !! | ATATATGTTTCTGCGTAATA+GGG | - | chr1.2:53197163-53197182 | MS.gene50636:intron | 25.0% |
| !! | GATCTTCATCTTTTTATTGT+AGG | - | chr1.2:53195264-53195283 | MS.gene50636:intron | 25.0% |
| !! | TATCTAATCATTTTCACAAG+TGG | + | chr1.2:53196094-53196113 | None:intergenic | 25.0% |
| !! | TCAAATGAAGGAATCTATTT+TGG | - | chr1.2:53197351-53197370 | MS.gene50636:intron | 25.0% |
| !! | TCATTTTATCATTGATGAAC+TGG | - | chr1.2:53196891-53196910 | MS.gene50636:intron | 25.0% |
| !! | TGTTTTATCAACATGAAACT+TGG | + | chr1.2:53195116-53195135 | None:intergenic | 25.0% |
| !!! | ACATTGAAAGCATTTGATAA+GGG | - | chr1.2:53197244-53197263 | MS.gene50636:CDS | 25.0% |
| !!! | ACTTTTTCAATTTTAGCTTC+TGG | - | chr1.2:53193177-53193196 | MS.gene50636:CDS | 25.0% |
| !!! | ATTTTTAGGTCAAAAAAGTG+CGG | - | chr1.2:53193071-53193090 | MS.gene50636:CDS | 25.0% |
| !!! | CTTTTTCAATTTTAGCTTCT+GGG | - | chr1.2:53193178-53193197 | MS.gene50636:CDS | 25.0% |
| !!! | TACATTGAAAGCATTTGATA+AGG | - | chr1.2:53197243-53197262 | MS.gene50636:CDS | 25.0% |
| !!! | TAGCACGTTAATTTTTTACT+AGG | - | chr1.2:53194670-53194689 | MS.gene50636:intron | 25.0% |
| !!! | TGAATTTTGATTAGTGAGAT+AGG | + | chr1.2:53197080-53197099 | None:intergenic | 25.0% |
| !!! | TTACAACTATTTCTGCAAAA+AGG | - | chr1.2:53196351-53196370 | MS.gene50636:intron | 25.0% |
| !!! | TTTGTTATCGATTTTAATCG+AGG | - | chr1.2:53196414-53196433 | MS.gene50636:intron | 25.0% |
| AAACATCAACTTCTACAAGT+TGG | + | chr1.2:53195972-53195991 | None:intergenic | 30.0% | |
| AATCCAGTATAGTCAAAGAA+TGG | + | chr1.2:53193206-53193225 | None:intergenic | 30.0% | |
| ACAATAAAAGGCTTAAAAGG+AGG | + | chr1.2:53195168-53195187 | None:intergenic | 30.0% | |
| AGCTCGAAAGAAATTCTTAA+AGG | - | chr1.2:53196662-53196681 | MS.gene50636:intron | 30.0% | |
| ATATTTATTAGGCATCTGGT+CGG | - | chr1.2:53193929-53193948 | MS.gene50636:intron | 30.0% | |
| ATGATAGAAGTGATTACAAC+AGG | - | chr1.2:53194693-53194712 | MS.gene50636:CDS | 30.0% | |
| ATGATATAATTGAGTCTAGG+AGG | + | chr1.2:53194840-53194859 | None:intergenic | 30.0% | |
| ATGTACATTTCTATGAAGCA+CGG | - | chr1.2:53193325-53193344 | MS.gene50636:CDS | 30.0% | |
| CAATAAAAGGCTTAAAAGGA+GGG | + | chr1.2:53195167-53195186 | None:intergenic | 30.0% | |
| GAAATGTGAATGTAAACTTC+TGG | + | chr1.2:53194925-53194944 | None:intergenic | 30.0% | |
| GAAGTCATTGAAATGTTCAT+AGG | + | chr1.2:53195324-53195343 | None:intergenic | 30.0% | |
| GAAGTTTACATTCACATTTC+CGG | - | chr1.2:53194925-53194944 | MS.gene50636:CDS | 30.0% | |
| GATACTCAAAACTACAGATT+CGG | + | chr1.2:53193845-53193864 | None:intergenic | 30.0% | |
| GCAAAGTTGAAATAAATGAC+AGG | + | chr1.2:53194985-53195004 | None:intergenic | 30.0% | |
| GCCAATATATACATAGAATG+AGG | + | chr1.2:53195813-53195832 | None:intergenic | 30.0% | |
| GCTCGAAAGAAATTCTTAAA+GGG | - | chr1.2:53196663-53196682 | MS.gene50636:intron | 30.0% | |
| GTGGAACAATTTATGCAAAT+GGG | - | chr1.2:53195438-53195457 | MS.gene50636:intron | 30.0% | |
| TAACAAAACAGAATGCATGA+AGG | + | chr1.2:53194263-53194282 | None:intergenic | 30.0% | |
| TAGAAATAATTATGGCTGAC+AGG | - | chr1.2:53195084-53195103 | MS.gene50636:intron | 30.0% | |
| TAGGAGGAAATTATTAACTG+CGG | + | chr1.2:53194824-53194843 | None:intergenic | 30.0% | |
| TGATGACAAAGATGATCTAA+GGG | - | chr1.2:53196740-53196759 | MS.gene50636:CDS | 30.0% | |
| TGTGTTTGATCTTTGATACA+CGG | - | chr1.2:53194870-53194889 | MS.gene50636:intron | 30.0% | |
| TTACATCCTTATCATGAAAG+TGG | - | chr1.2:53194608-53194627 | MS.gene50636:intron | 30.0% | |
| ! | AAAAGGAGGGATCATTTTAT+GGG | + | chr1.2:53195154-53195173 | None:intergenic | 30.0% |
| ! | ATAGTACTTTTCAGTGACTT+TGG | - | chr1.2:53194633-53194652 | MS.gene50636:intron | 30.0% |
| ! | CAACTTTCTGCTAAACTTTT+TGG | - | chr1.2:53195733-53195752 | MS.gene50636:intron | 30.0% |
| ! | TAAAAGGAGGGATCATTTTA+TGG | + | chr1.2:53195155-53195174 | None:intergenic | 30.0% |
| ! | TAGTTGTGGATTTTCTACTT+AGG | - | chr1.2:53195839-53195858 | MS.gene50636:intron | 30.0% |
| ! | TCTGGAACAATAAATTACCA+GGG | + | chr1.2:53194907-53194926 | None:intergenic | 30.0% |
| ! | TCTTTTTATCTAATTCTGGG+TGG | + | chr1.2:53194433-53194452 | None:intergenic | 30.0% |
| !! | AAGTTGATGTTTACAGTTTG+CGG | - | chr1.2:53195980-53195999 | MS.gene50636:intron | 30.0% |
| !! | CATTGAAAGCATTTGATAAG+GGG | - | chr1.2:53197245-53197264 | MS.gene50636:CDS | 30.0% |
| !! | GAATCTATTTTGGAGAAGTA+TGG | - | chr1.2:53197361-53197380 | MS.gene50636:intron | 30.0% |
| !! | TGTTTCTGATTTTCAGTGAT+AGG | - | chr1.2:53194404-53194423 | MS.gene50636:CDS | 30.0% |
| !! | TTCTGGAACAATAAATTACC+AGG | + | chr1.2:53194908-53194927 | None:intergenic | 30.0% |
| !!! | TTTTCAGTGACTTTGGTTTT+TGG | - | chr1.2:53194640-53194659 | MS.gene50636:intron | 30.0% |
| !!! | TTTTTTTCTTTCCAAGGTAG+TGG | + | chr1.2:53196028-53196047 | None:intergenic | 30.0% |
| AAATGCTTTACATGAGTGGA+AGG | - | chr1.2:53194958-53194977 | MS.gene50636:CDS | 35.0% | |
| ACAAGTTATTTACAGGATCC+TGG | - | chr1.2:53193597-53193616 | MS.gene50636:CDS | 35.0% | |
| ACAGTGTGGCAATGTATTAA+AGG | - | chr1.2:53193620-53193639 | MS.gene50636:CDS | 35.0% | |
| AGATGCCTACACTTGATATA+TGG | + | chr1.2:53195211-53195230 | None:intergenic | 35.0% | |
| ATGGTCCATATATCAAGTGT+AGG | - | chr1.2:53195203-53195222 | MS.gene50636:intron | 35.0% | |
| ATTCGGACAGAAAATTTCGA+TGG | + | chr1.2:53193828-53193847 | None:intergenic | 35.0% | |
| CAAGTAGATGACCCAATTTA+AGG | + | chr1.2:53193515-53193534 | None:intergenic | 35.0% | |
| CAGTGTGGCAATGTATTAAA+GGG | - | chr1.2:53193621-53193640 | MS.gene50636:CDS | 35.0% | |
| CTAGTCACACTCTTATTACT+TGG | + | chr1.2:53194537-53194556 | None:intergenic | 35.0% | |
| CTATGACCACTTTCATGATA+AGG | + | chr1.2:53194617-53194636 | None:intergenic | 35.0% | |
| CTGATGACAAAGATGATCTA+AGG | - | chr1.2:53196739-53196758 | MS.gene50636:CDS | 35.0% | |
| GAAACTGAAGTCTCAAATGA+AGG | - | chr1.2:53197339-53197358 | MS.gene50636:intron | 35.0% | |
| GAAATGCTTCCTGTTTCAAA+TGG | + | chr1.2:53194771-53194790 | None:intergenic | 35.0% | |
| GATAACCAGTATAGGAATAG+TGG | - | chr1.2:53197187-53197206 | MS.gene50636:intron | 35.0% | |
| GCTAAAATGCCTTTATCTTC+AGG | - | chr1.2:53196915-53196934 | MS.gene50636:intron | 35.0% | |
| GCTTCGTAATATTGAAAAGC+AGG | - | chr1.2:53193152-53193171 | MS.gene50636:CDS | 35.0% | |
| GGTGGAACAATTTATGCAAA+TGG | - | chr1.2:53195437-53195456 | MS.gene50636:intron | 35.0% | |
| GTAGAAAATCCACAACTACT+AGG | + | chr1.2:53195837-53195856 | None:intergenic | 35.0% | |
| GTCAGGAAAAGCAAAATCAT+GGG | - | chr1.2:53193979-53193998 | MS.gene50636:intron | 35.0% | |
| GTTCCATTCTTTGACTATAC+TGG | - | chr1.2:53193200-53193219 | MS.gene50636:intron | 35.0% | |
| TAATGAAAAGAGCCTGTCTT+CGG | + | chr1.2:53194360-53194379 | None:intergenic | 35.0% | |
| TATTTATTAGGCATCTGGTC+GGG | - | chr1.2:53193930-53193949 | MS.gene50636:intron | 35.0% | |
| TGGAAAAACCTGCATTAGAT+AGG | - | chr1.2:53195768-53195787 | MS.gene50636:intron | 35.0% | |
| TTATCCATCCTATCATCCTT+AGG | + | chr1.2:53193867-53193886 | None:intergenic | 35.0% | |
| TTCAATCACAATGTCATGTC+AGG | + | chr1.2:53195697-53195716 | None:intergenic | 35.0% | |
| TTGAGTATCCTAAGGATGAT+AGG | - | chr1.2:53193856-53193875 | MS.gene50636:intron | 35.0% | |
| TTTCGATGGTACTTCTTCTA+CGG | + | chr1.2:53193814-53193833 | None:intergenic | 35.0% | |
| TTTCTTTCGAGCTTCATCTA+TGG | + | chr1.2:53196655-53196674 | None:intergenic | 35.0% | |
| ! | AGTTGATTGGTCCTTTAAGT+TGG | - | chr1.2:53196843-53196862 | MS.gene50636:intron | 35.0% |
| ! | ATCATTTTATGGGATAGGAG+AGG | + | chr1.2:53195144-53195163 | None:intergenic | 35.0% |
| ! | CAAGTAATAAGAGTGTGACT+AGG | - | chr1.2:53194535-53194554 | MS.gene50636:intron | 35.0% |
| ! | TATCTAATGCAGGTTTTTCC+AGG | + | chr1.2:53195769-53195788 | None:intergenic | 35.0% |
| ! | TGCAAAAAGGTGTGTAAAGA+TGG | - | chr1.2:53196364-53196383 | MS.gene50636:intron | 35.0% |
| ! | TGCTGAAAGCACAATGAAAT+TGG | - | chr1.2:53194151-53194170 | MS.gene50636:intron | 35.0% |
| ! | TGTTTACAGTTTGCGGTTTT+TGG | - | chr1.2:53195987-53196006 | MS.gene50636:CDS | 35.0% |
| !! | GATCAAACTTAGTTCTGTAC+AGG | + | chr1.2:53195948-53195967 | None:intergenic | 35.0% |
| !!! | CTGTAGTTTTGAGTATCCTA+AGG | - | chr1.2:53193848-53193867 | MS.gene50636:intron | 35.0% |
| !!! | CTTTTTGGAATATAAGAGCC+TGG | - | chr1.2:53195748-53195767 | MS.gene50636:intron | 35.0% |
| AAGTATGGAAATGCAGCTGA+TGG | - | chr1.2:53197376-53197395 | MS.gene50636:intron | 40.0% | |
| AATAGGGCGATAACCAGTAT+AGG | - | chr1.2:53197179-53197198 | MS.gene50636:intron | 40.0% | |
| AATGAAAAGAGCCTGTCTTC+GGG | + | chr1.2:53194359-53194378 | None:intergenic | 40.0% | |
| ACCTCATACAGCTTCTCATT+TGG | + | chr1.2:53197055-53197074 | None:intergenic | 40.0% | |
| ACGAAGCTCTTCATGAAGTT+TGG | + | chr1.2:53193139-53193158 | None:intergenic | 40.0% | |
| AGGGTATGATCAACTAAGCT+AGG | + | chr1.2:53196513-53196532 | None:intergenic | 40.0% | |
| AGTATGGAAATGCAGCTGAT+GGG | - | chr1.2:53197377-53197396 | MS.gene50636:intron | 40.0% | |
| ATGTAGTAACTACCTTGCTC+CGG | + | chr1.2:53196147-53196166 | None:intergenic | 40.0% | |
| CAGTGTTCTTTGTTGACGAT+AGG | + | chr1.2:53193659-53193678 | None:intergenic | 40.0% | |
| CTACCTGTTCTTTCAGTACT+TGG | - | chr1.2:53193762-53193781 | MS.gene50636:intron | 40.0% | |
| CTCGACACAGGTTTATGATA+TGG | - | chr1.2:53193572-53193591 | MS.gene50636:intron | 40.0% | |
| CTTGACCACTATTCCTATAC+TGG | + | chr1.2:53197195-53197214 | None:intergenic | 40.0% | |
| GACATTGTGATTGAACATGC+TGG | - | chr1.2:53195702-53195721 | MS.gene50636:intron | 40.0% | |
| GGGAAGTCAGCTTAAGAAAT+TGG | - | chr1.2:53196683-53196702 | MS.gene50636:intron | 40.0% | |
| GGTCAGGAAAAGCAAAATCA+TGG | - | chr1.2:53193978-53193997 | MS.gene50636:intron | 40.0% | |
| GTAGGCATCTTATCTCAACA+GGG | - | chr1.2:53195221-53195240 | MS.gene50636:intron | 40.0% | |
| GTATCCTAAGGATGATAGGA+TGG | - | chr1.2:53193860-53193879 | MS.gene50636:intron | 40.0% | |
| TAAAGCCATTCAGCTTGAGA+CGG | + | chr1.2:53197295-53197314 | None:intergenic | 40.0% | |
| TAGGAATAGTGGTCAAGCTT+TGG | - | chr1.2:53197198-53197217 | MS.gene50636:intron | 40.0% | |
| TATAGGGGTAAACCGAAGAA+AGG | - | chr1.2:53195601-53195620 | MS.gene50636:intron | 40.0% | |
| TCCAAATGAGAAGCTGTATG+AGG | - | chr1.2:53197051-53197070 | MS.gene50636:intron | 40.0% | |
| TGGGTCACACTCTTATTACT+TGG | + | chr1.2:53194477-53194496 | None:intergenic | 40.0% | |
| TGTAGGCATCTTATCTCAAC+AGG | - | chr1.2:53195220-53195239 | MS.gene50636:intron | 40.0% | |
| TTTGGATCTGCAACTGAAAG+AGG | + | chr1.2:53197037-53197056 | None:intergenic | 40.0% | |
| ! | AATTTTTGTGATCCGGAGCA+AGG | - | chr1.2:53196132-53196151 | MS.gene50636:intron | 40.0% |
| ! | ATAAGAGTGTGACTAGGTCT+TGG | - | chr1.2:53194541-53194560 | MS.gene50636:intron | 40.0% |
| ! | ATGAGAGTACAGGAACTGTT+AGG | - | chr1.2:53196781-53196800 | MS.gene50636:CDS | 40.0% |
| ! | ATTTGGGACACTGAAAAGCT+TGG | - | chr1.2:53196186-53196205 | MS.gene50636:intron | 40.0% |
| ! | GAGGGATCATTTTATGGGAT+AGG | + | chr1.2:53195149-53195168 | None:intergenic | 40.0% |
| ! | GATCTCCCATCTGAGATAAA+TGG | + | chr1.2:53195392-53195411 | None:intergenic | 40.0% |
| ! | GTGTATTTTGTTCTCGACAC+AGG | - | chr1.2:53193560-53193579 | MS.gene50636:intron | 40.0% |
| ! | TAATGCAGGGGAAAGTTGAT+TGG | - | chr1.2:53196830-53196849 | MS.gene50636:intron | 40.0% |
| ! | TCAGATGGGAGATCAGATTT+TGG | - | chr1.2:53195398-53195417 | MS.gene50636:intron | 40.0% |
| ! | TCTTTGATACACGGAGTACT+AGG | - | chr1.2:53194879-53194898 | MS.gene50636:intron | 40.0% |
| ! | TTTTTGTTGGCAGCTTGAAG+CGG | - | chr1.2:53194318-53194337 | MS.gene50636:intron | 40.0% |
| !! | AGATGATCTAAGGGTTGATG+AGG | - | chr1.2:53196749-53196768 | MS.gene50636:CDS | 40.0% |
| !! | ATATTGGCTCCTAGTAGTTG+TGG | - | chr1.2:53195825-53195844 | MS.gene50636:intron | 40.0% |
| !! | CTACCAAGTACTGAAAGAAC+AGG | + | chr1.2:53193768-53193787 | None:intergenic | 40.0% |
| !! | GGCAAGATTTCTTTGAAGCT+TGG | + | chr1.2:53196492-53196511 | None:intergenic | 40.0% |
| !! | TGAAACAGGAAGCATTTCAG+AGG | - | chr1.2:53194773-53194792 | MS.gene50636:intron | 40.0% |
| !! | TGGTCAAGCTTTGGAATTCA+AGG | - | chr1.2:53197207-53197226 | MS.gene50636:intron | 40.0% |
| !! | TTACAGTTTGCGGTTTTTGG+TGG | - | chr1.2:53195990-53196009 | MS.gene50636:CDS | 40.0% |
| !! | TTTGGCTCTTCTACTAAGCA+AGG | + | chr1.2:53193121-53193140 | None:intergenic | 40.0% |
| !!! | TACAGTTTGCGGTTTTTGGT+GGG | - | chr1.2:53195991-53196010 | MS.gene50636:CDS | 40.0% |
| AAGAGATGCGAAGAGAGCAA+GGG | - | chr1.2:53195636-53195655 | MS.gene50636:intron | 45.0% | |
| AAGGAAGCCAACATTGCTGA+AGG | + | chr1.2:53193102-53193121 | None:intergenic | 45.0% | |
| AATACATTGCCACACTGTCC+AGG | + | chr1.2:53193618-53193637 | None:intergenic | 45.0% | |
| ACCAATGGCCTATCTAATGC+AGG | + | chr1.2:53195779-53195798 | None:intergenic | 45.0% | |
| ACCTGCATTAGATAGGCCAT+TGG | - | chr1.2:53195775-53195794 | MS.gene50636:intron | 45.0% | |
| ACGCAGGTTCCTGAAGATAA+AGG | + | chr1.2:53196927-53196946 | None:intergenic | 45.0% | |
| ACTCACTGTGATACTGTGCT+GGG | - | chr1.2:53194033-53194052 | MS.gene50636:intron | 45.0% | |
| AGGAAGCCAACATTGCTGAA+GGG | + | chr1.2:53193101-53193120 | None:intergenic | 45.0% | |
| GAAAATCAGAAACACACCGC+TGG | + | chr1.2:53194398-53194417 | None:intergenic | 45.0% | |
| GAGGAATTGCAGAGAACCAA+TGG | + | chr1.2:53195794-53195813 | None:intergenic | 45.0% | |
| GGTAAACCGAAGAAAGGAAG+AGG | - | chr1.2:53195607-53195626 | MS.gene50636:intron | 45.0% | |
| GTATGGAAATGCAGCTGATG+GGG | - | chr1.2:53197378-53197397 | MS.gene50636:intron | 45.0% | |
| GTTGAGTTAAGAGTTTCGCG+TGG | - | chr1.2:53194715-53194734 | MS.gene50636:CDS | 45.0% | |
| TACTCACTGTGATACTGTGC+TGG | - | chr1.2:53194032-53194051 | MS.gene50636:intron | 45.0% | |
| TCTTCAGGAACCTGCGTATT+CGG | - | chr1.2:53196930-53196949 | MS.gene50636:intron | 45.0% | |
| TTGGAGAAGAACAGCCAAAC+TGG | - | chr1.2:53196702-53196721 | MS.gene50636:intron | 45.0% | |
| TTTGGTCCTGGTCGATCAAA+AGG | - | chr1.2:53195416-53195435 | MS.gene50636:intron | 45.0% | |
| ! | AATCCAGAGTACCACTACCT+TGG | - | chr1.2:53196014-53196033 | MS.gene50636:CDS | 45.0% |
| ! | TCACGCATTGACCTAGTCTT+GGG | + | chr1.2:53197010-53197029 | None:intergenic | 45.0% |
| ! | TTCACGCATTGACCTAGTCT+TGG | + | chr1.2:53197011-53197030 | None:intergenic | 45.0% |
| ! | TTTCCAAGGTAGTGGTACTC+TGG | + | chr1.2:53196020-53196039 | None:intergenic | 45.0% |
| !! | GCAAAGGTTGATGAGAGTAC+AGG | - | chr1.2:53196771-53196790 | MS.gene50636:CDS | 45.0% |
| !! | TCTAAGGGTTGATGAGGCAA+AGG | - | chr1.2:53196755-53196774 | MS.gene50636:CDS | 45.0% |
| !! | TAAAAATATATAGTTATTTA+TGG | - | chr1.2:53194210-53194229 | MS.gene50636:intron | 5.0% |
| !! | TCAAATAAAAAATTAATAAA+AGG | + | chr1.2:53193292-53193311 | None:intergenic | 5.0% |
| !!! | TTTTAATAAAAATTATGATT+AGG | + | chr1.2:53196469-53196488 | None:intergenic | 5.0% |
| CAAGAGATGCGAAGAGAGCA+AGG | - | chr1.2:53195635-53195654 | MS.gene50636:intron | 50.0% | |
| CACACTACGATCCCAAGACT+AGG | - | chr1.2:53196996-53197015 | MS.gene50636:intron | 50.0% | |
| CATCTCCGTCTCAAGCTGAA+TGG | - | chr1.2:53197287-53197306 | MS.gene50636:CDS | 50.0% | |
| CTTCAGGAACCTGCGTATTC+GGG | - | chr1.2:53196931-53196950 | MS.gene50636:intron | 50.0% | |
| CTTGCTCTCTTCGCATCTCT+TGG | + | chr1.2:53195637-53195656 | None:intergenic | 50.0% | |
| GAAAGTTTCAGCCCGAAGAC+AGG | - | chr1.2:53194345-53194364 | MS.gene50636:intron | 50.0% | |
| GAAGAACAGCCAAACTGGTG+AGG | - | chr1.2:53196707-53196726 | MS.gene50636:CDS | 50.0% | |
| GGGACACTGAAAAGCTTGGA+TGG | - | chr1.2:53196190-53196209 | MS.gene50636:intron | 50.0% | |
| GGTGAACCCTTCAGCAATGT+TGG | - | chr1.2:53193092-53193111 | MS.gene50636:CDS | 50.0% | |
| TTACAGGATCCTGGACAGTG+TGG | - | chr1.2:53193606-53193625 | MS.gene50636:CDS | 50.0% | |
| TTGCCACATCCTCACCAGTT+TGG | + | chr1.2:53196719-53196738 | None:intergenic | 50.0% | |
| ! | GTTCCACCTTTTGATCGACC+AGG | + | chr1.2:53195425-53195444 | None:intergenic | 50.0% |
| !! | CAGAAGTGTCAGTGCTACAG+AGG | - | chr1.2:53193422-53193441 | MS.gene50636:CDS | 50.0% |
| !! | GGGAGATCAGATTTTGGTCC+TGG | - | chr1.2:53195404-53195423 | MS.gene50636:intron | 50.0% |
| ATCTTCAGTGACCTCGCCAG+CGG | - | chr1.2:53194379-53194398 | MS.gene50636:CDS | 55.0% | |
| CAGCCAAACTGGTGAGGATG+TGG | - | chr1.2:53196713-53196732 | MS.gene50636:CDS | 55.0% | |
| GAAGCACGGACACAACAACG+CGG | - | chr1.2:53193339-53193358 | MS.gene50636:CDS | 55.0% | |
| GGCGCACCTCTTCCTTTCTT+CGG | + | chr1.2:53195616-53195635 | None:intergenic | 55.0% | |
| GGTCCTGGTCGATCAAAAGG+TGG | - | chr1.2:53195419-53195438 | MS.gene50636:intron | 55.0% | |
| TAGGCAGAAGAGCTTGCAGC+TGG | - | chr1.2:53195283-53195302 | MS.gene50636:intron | 55.0% | |
| ! | ACACGGAGTACTAGGAACCC+TGG | - | chr1.2:53194887-53194906 | MS.gene50636:intron | 55.0% |
| CAGGAACCTGCGTATTCGGG+AGG | - | chr1.2:53196934-53196953 | MS.gene50636:intron | 60.0% | |
| CAGTGTCCTCCCGAATACGC+AGG | + | chr1.2:53196943-53196962 | None:intergenic | 60.0% | |
| GAGCTTGCAGCTGGACGAGA+CGG | - | chr1.2:53195292-53195311 | MS.gene50636:intron | 60.0% | |
| TCAGAAACACACCGCTGGCG+AGG | + | chr1.2:53194393-53194412 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 53192970 | 53197417 | 53192970 | ID=MS.gene50636 |
| chr1.2 | mRNA | 53192970 | 53197417 | 53192970 | ID=MS.gene50636.t1;Parent=MS.gene50636 |
| chr1.2 | exon | 53197405 | 53197417 | 53197405 | ID=MS.gene50636.t1.exon1;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53197405 | 53197417 | 53197405 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| chr1.2 | exon | 53197214 | 53197308 | 53197214 | ID=MS.gene50636.t1.exon2;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53197214 | 53197308 | 53197214 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| chr1.2 | exon | 53196705 | 53196805 | 53196705 | ID=MS.gene50636.t1.exon3;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53196705 | 53196805 | 53196705 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| chr1.2 | exon | 53195987 | 53196056 | 53195987 | ID=MS.gene50636.t1.exon4;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53195987 | 53196056 | 53195987 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| chr1.2 | exon | 53195074 | 53195101 | 53195074 | ID=MS.gene50636.t1.exon5;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53195074 | 53195101 | 53195074 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| chr1.2 | exon | 53194925 | 53194985 | 53194925 | ID=MS.gene50636.t1.exon6;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53194925 | 53194985 | 53194925 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| chr1.2 | exon | 53194680 | 53194781 | 53194680 | ID=MS.gene50636.t1.exon7;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53194680 | 53194781 | 53194680 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| chr1.2 | exon | 53194366 | 53194433 | 53194366 | ID=MS.gene50636.t1.exon8;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53194366 | 53194433 | 53194366 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| chr1.2 | exon | 53193585 | 53193747 | 53193585 | ID=MS.gene50636.t1.exon9;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53193585 | 53193747 | 53193585 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| chr1.2 | exon | 53193315 | 53193450 | 53193315 | ID=MS.gene50636.t1.exon10;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53193315 | 53193450 | 53193315 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| chr1.2 | exon | 53192970 | 53193203 | 53192970 | ID=MS.gene50636.t1.exon11;Parent=MS.gene50636.t1 |
| chr1.2 | CDS | 53192970 | 53193203 | 53192970 | ID=cds.MS.gene50636.t1;Parent=MS.gene50636.t1 |
| Gene Sequence |
| Protein sequence |
