Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056082.t1 | ABD28336.2 | 91.6 | 107 | 8 | 1 | 1 | 107 | 46 | 151 | 7.80E-48 | 199.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056082.t1 | O80494 | 42.7 | 117 | 54 | 7 | 2 | 107 | 166 | 280 | 1.3e-14 | 80.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056082.t1 | B7FIK6 | 91.6 | 107 | 8 | 1 | 1 | 107 | 176 | 281 | 5.6e-48 | 199.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene056082 | 0.809499 | 1.84E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene056082 | 0.80047 | 1.42E-48 | -1.69E-46 |
| MS.gene049711 | MS.gene056082 | 0.809184 | 2.15E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene056082 | 0.826447 | 2.70E-54 | -1.69E-46 |
| MS.gene051043 | MS.gene056082 | 0.809285 | 2.04E-50 | -1.69E-46 |
| MS.gene051201 | MS.gene056082 | 0.818051 | 2.40E-52 | -1.69E-46 |
| MS.gene052016 | MS.gene056082 | 0.820749 | 5.82E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene056082 | 0.81067 | 1.03E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene056082 | 0.800506 | 1.40E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene056082 | 0.805415 | 1.35E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene056082 | 0.815525 | 8.84E-52 | -1.69E-46 |
| MS.gene054178 | MS.gene056082 | 0.817636 | 2.98E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene057102 | 0.834157 | 3.52E-56 | -1.69E-46 |
| MS.gene056082 | MS.gene05985 | -0.823619 | 1.26E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene061100 | 0.820962 | 5.20E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene061564 | 0.807139 | 5.85E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene061707 | 0.824587 | 7.45E-54 | -1.69E-46 |
| MS.gene056082 | MS.gene061782 | 0.824198 | 9.19E-54 | -1.69E-46 |
| MS.gene056082 | MS.gene062288 | 0.80998 | 1.45E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene064243 | 0.803564 | 3.28E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene065055 | 0.821318 | 4.30E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene065069 | 0.814237 | 1.71E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene065510 | 0.802058 | 6.72E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene066072 | 0.823965 | 1.04E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene066196 | 0.801954 | 7.06E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene066335 | 0.806733 | 7.13E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene068941 | 0.804462 | 2.14E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene069825 | 0.815405 | 9.40E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene070025 | 0.824843 | 6.48E-54 | -1.69E-46 |
| MS.gene056082 | MS.gene070029 | 0.846212 | 2.50E-59 | -1.69E-46 |
| MS.gene056082 | MS.gene07073 | 0.821088 | 4.86E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene071301 | 0.814667 | 1.37E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene072153 | 0.800383 | 1.48E-48 | -1.69E-46 |
| MS.gene056082 | MS.gene072685 | 0.814054 | 1.87E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene072803 | 0.810846 | 9.41E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene074317 | 0.850156 | 2.04E-60 | -1.69E-46 |
| MS.gene056082 | MS.gene07450 | 0.814785 | 1.29E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene20064 | 0.844452 | 7.50E-59 | -1.69E-46 |
| MS.gene056082 | MS.gene21114 | 0.808954 | 2.40E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene22433 | 0.845545 | 3.80E-59 | -1.69E-46 |
| MS.gene056082 | MS.gene22522 | 0.814656 | 1.38E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene24050 | 0.81191 | 5.53E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene24052 | 0.809302 | 2.02E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene25061 | 0.803044 | 4.21E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene25981 | -0.821632 | 3.64E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene25991 | 0.820837 | 5.55E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene27646 | -0.823114 | 1.65E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene28611 | 0.822139 | 2.78E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene28918 | 0.819565 | 1.09E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene29631 | 0.809928 | 1.48E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene29920 | 0.811534 | 6.67E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene29921 | 0.807324 | 5.34E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene31466 | 0.802572 | 5.26E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene32182 | 0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene32688 | 0.844075 | 9.46E-59 | -1.69E-46 |
| MS.gene056082 | MS.gene33059 | 0.839549 | 1.48E-57 | -1.69E-46 |
| MS.gene056082 | MS.gene33511 | 0.82485 | 6.45E-54 | -1.69E-46 |
| MS.gene056082 | MS.gene34164 | 0.838907 | 2.18E-57 | -1.69E-46 |
| MS.gene056082 | MS.gene34266 | 0.81577 | 7.80E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene34508 | 0.800634 | 1.31E-48 | -1.69E-46 |
| MS.gene056082 | MS.gene34950 | 0.805902 | 1.07E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene35375 | 0.802893 | 4.52E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene35530 | 0.84546 | 4.01E-59 | -1.69E-46 |
| MS.gene056082 | MS.gene36497 | 0.802723 | 4.90E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene36571 | 0.809509 | 1.83E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene38207 | 0.800197 | 1.61E-48 | -1.69E-46 |
| MS.gene056082 | MS.gene39406 | 0.817213 | 3.71E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene42653 | 0.845008 | 5.31E-59 | -1.69E-46 |
| MS.gene056082 | MS.gene44256 | 0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene45281 | 0.802846 | 4.62E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene47390 | 0.801951 | 7.07E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene47768 | 0.814422 | 1.55E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene48037 | 0.804449 | 2.15E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene49642 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene056082 | MS.gene49643 | 0.802787 | 4.75E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene49651 | 0.811275 | 7.59E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene49876 | 0.818394 | 2.01E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene50394 | 0.838361 | 3.01E-57 | -1.69E-46 |
| MS.gene056082 | MS.gene51038 | -0.81679 | 4.61E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene51040 | -0.810919 | 9.07E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene51071 | -0.823127 | 1.64E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene51072 | -0.825906 | 3.63E-54 | -1.69E-46 |
| MS.gene056082 | MS.gene52404 | 0.85001 | 2.24E-60 | -1.69E-46 |
| MS.gene056082 | MS.gene52849 | 0.800193 | 1.62E-48 | -1.69E-46 |
| MS.gene056082 | MS.gene55818 | 0.808241 | 3.41E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene56510 | 0.801708 | 7.93E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene56807 | -0.822046 | 2.92E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene57519 | 0.804926 | 1.71E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene57576 | 0.830227 | 3.31E-55 | -1.69E-46 |
| MS.gene056082 | MS.gene57783 | 0.809102 | 2.23E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene57980 | 0.806095 | 9.71E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene58248 | 0.814844 | 1.25E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene58925 | 0.807709 | 4.43E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene59241 | 0.813871 | 2.06E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene59242 | 0.829845 | 4.10E-55 | -1.69E-46 |
| MS.gene056082 | MS.gene59540 | 0.805552 | 1.26E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene59697 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene056082 | MS.gene62676 | 0.800844 | 1.19E-48 | -1.69E-46 |
| MS.gene056082 | MS.gene62677 | 0.812256 | 4.65E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene63430 | 0.817734 | 2.83E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene66409 | 0.812682 | 3.75E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene67067 | 0.807814 | 4.20E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene68543 | 0.815539 | 8.78E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene68713 | 0.801491 | 8.78E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene69820 | 0.812806 | 3.52E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene69823 | 0.800538 | 1.38E-48 | -1.69E-46 |
| MS.gene056082 | MS.gene69933 | 0.805942 | 1.05E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene69978 | 0.802044 | 6.76E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene70656 | 0.830937 | 2.22E-55 | -1.69E-46 |
| MS.gene056082 | MS.gene71236 | 0.813094 | 3.05E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene71891 | -0.801855 | 7.39E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene72064 | 0.83377 | 4.41E-56 | -1.69E-46 |
| MS.gene056082 | MS.gene73577 | 0.812133 | 4.94E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene74537 | 0.822024 | 2.95E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene74606 | 0.849713 | 2.71E-60 | -1.69E-46 |
| MS.gene056082 | MS.gene74972 | 0.83101 | 2.13E-55 | -1.69E-46 |
| MS.gene056082 | MS.gene74982 | 0.808814 | 2.57E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene75344 | 0.806832 | 6.79E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene75719 | 0.811517 | 6.73E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene76227 | 0.855482 | 6.13E-62 | -1.69E-46 |
| MS.gene056082 | MS.gene76314 | 0.847799 | 9.20E-60 | -1.69E-46 |
| MS.gene056082 | MS.gene77361 | 0.812117 | 4.98E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene80201 | 0.842352 | 2.72E-58 | -1.69E-46 |
| MS.gene056082 | MS.gene80729 | 0.810893 | 9.19E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene82912 | 0.814878 | 1.23E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene83312 | 0.803722 | 3.04E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene83630 | 0.822643 | 2.12E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene84703 | 0.808364 | 3.21E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene85281 | 0.824452 | 8.01E-54 | -1.69E-46 |
| MS.gene056082 | MS.gene86038 | 0.814448 | 1.53E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene88147 | 0.819459 | 1.15E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene89605 | 0.810025 | 1.41E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene89985 | 0.842745 | 2.14E-58 | -1.69E-46 |
| MS.gene056082 | MS.gene90159 | 0.814018 | 1.91E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene90529 | 0.825901 | 3.64E-54 | -1.69E-46 |
| MS.gene056082 | MS.gene90880 | 0.820828 | 5.58E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene91203 | 0.81091 | 9.11E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene92348 | 0.815434 | 9.26E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene93123 | 0.814261 | 1.69E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene93902 | 0.82395 | 1.05E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene94056 | 0.805765 | 1.14E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene94674 | 0.848528 | 5.79E-60 | -1.69E-46 |
| MS.gene056082 | MS.gene95204 | 0.810094 | 1.37E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene95614 | 0.815721 | 8.00E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene96190 | 0.807578 | 4.72E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene98721 | 0.816627 | 5.02E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene99894 | 0.807027 | 6.18E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056082.t1 | MTR_1g083580 | 91.589 | 107 | 8 | 1 | 1 | 107 | 176 | 281 | 2.81e-67 | 203 |
| MS.gene056082.t1 | MTR_7g112550 | 55.752 | 113 | 39 | 3 | 2 | 107 | 175 | 283 | 6.19e-36 | 124 |
| MS.gene056082.t1 | MTR_7g112560 | 37.037 | 108 | 49 | 4 | 2 | 107 | 167 | 257 | 4.21e-12 | 60.5 |
| MS.gene056082.t1 | MTR_1g079460 | 58.182 | 55 | 21 | 2 | 55 | 107 | 212 | 266 | 4.41e-12 | 60.8 |
| MS.gene056082.t1 | MTR_1g079380 | 37.037 | 108 | 53 | 5 | 3 | 107 | 170 | 265 | 8.04e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056082.t1 | AT1G09155 | 42.735 | 117 | 54 | 7 | 2 | 107 | 166 | 280 | 3.73e-19 | 80.1 |
| MS.gene056082.t1 | AT1G56250 | 43.966 | 116 | 54 | 6 | 2 | 107 | 167 | 281 | 1.58e-16 | 72.8 |
| MS.gene056082.t1 | AT1G56240 | 45.217 | 115 | 52 | 6 | 2 | 106 | 167 | 280 | 1.82e-16 | 72.8 |
Find 30 sgRNAs with CRISPR-Local
Find 31 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGTCAAACATATTTATTT+TGG | 0.292667 | 1.4:+67576957 | None:intergenic |
| CAAATTGATAGAAGATAATA+AGG | 0.294509 | 1.4:-67577135 | MS.gene056082:CDS |
| ATATTCGAGTTCCATCTAAA+AGG | 0.307761 | 1.4:-67577112 | MS.gene056082:CDS |
| ATGGCCAACAAAGTGCAAAA+TGG | 0.309663 | 1.4:-67577230 | MS.gene056082:CDS |
| GGAGGTTAAGATTAGTGTTA+TGG | 0.327028 | 1.4:-67577033 | MS.gene056082:CDS |
| TGGGTGGATGGAAATTGAAT+TGG | 0.398175 | 1.4:-67577084 | MS.gene056082:CDS |
| AAGATTAGTGTTATGGAGGT+TGG | 0.420611 | 1.4:-67577026 | MS.gene056082:CDS |
| TGGCCAACAAAGTGCAAAAT+GGG | 0.432183 | 1.4:-67577229 | MS.gene056082:CDS |
| AAGGGTGGTCTCATCGTTGA+AGG | 0.481480 | 1.4:-67576993 | MS.gene056082:CDS |
| TATTCGAGTTCCATCTAAAA+GGG | 0.481762 | 1.4:-67577111 | MS.gene056082:CDS |
| GGGTGGATGGAAATTGAATT+GGG | 0.484481 | 1.4:-67577083 | MS.gene056082:CDS |
| GTTCCATCTAAAAGGGATGA+TGG | 0.488515 | 1.4:-67577104 | MS.gene056082:CDS |
| GGAGGTTGGTTATAGACTGA+AGG | 0.490832 | 1.4:-67577012 | MS.gene056082:CDS |
| GGTTAAGATTAGTGTTATGG+AGG | 0.508835 | 1.4:-67577030 | MS.gene056082:CDS |
| TTATGAAAAGCATAGAAAGA+TGG | 0.529657 | 1.4:-67577165 | MS.gene056082:CDS |
| ATTGCAACTGATACCTCAGC+TGG | 0.529997 | 1.4:+67577251 | None:intergenic |
| AAGGTTTCACACCGTATGTA+CGG | 0.553117 | 1.4:-67577287 | None:intergenic |
| TTCCATCTAAAAGGGATGAT+GGG | 0.560247 | 1.4:-67577103 | MS.gene056082:CDS |
| AGCTGAGGTATCAGTTGCAA+TGG | 0.570422 | 1.4:-67577249 | MS.gene056082:CDS |
| TAAAAGGGATGATGGGTGGA+TGG | 0.573430 | 1.4:-67577096 | MS.gene056082:CDS |
| GAGGTTGGTTATAGACTGAA+GGG | 0.594688 | 1.4:-67577011 | MS.gene056082:CDS |
| GAAAAGCATAGAAAGATGGA+AGG | 0.602899 | 1.4:-67577161 | MS.gene056082:CDS |
| ACTTGATTCTGCGCCAGCTG+AGG | 0.612928 | 1.4:-67577264 | MS.gene056082:CDS |
| CAACAAAGTGCAAAATGGGA+TGG | 0.622257 | 1.4:-67577225 | MS.gene056082:CDS |
| CATCTAAAAGGGATGATGGG+TGG | 0.630515 | 1.4:-67577100 | MS.gene056082:CDS |
| TTTCTGTGGTGAAGTTGACA+TGG | 0.640269 | 1.4:-67577054 | MS.gene056082:CDS |
| CTGTGGTGAAGTTGACATGG+AGG | 0.689911 | 1.4:-67577051 | MS.gene056082:CDS |
| TTTGTACAATAAATACGAGG+AGG | 0.700943 | 1.4:-67577198 | MS.gene056082:CDS |
| GTTGGTTATAGACTGAAGGG+TGG | 0.721602 | 1.4:-67577008 | MS.gene056082:CDS |
| ATATTTGTACAATAAATACG+AGG | 0.779887 | 1.4:-67577201 | MS.gene056082:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTGTACAATAAATACG+AGG | - | chr1.4:67577042-67577061 | MS.gene056082:CDS | 20.0% |
| !! | CAAATTGATAGAAGATAATA+AGG | - | chr1.4:67577108-67577127 | MS.gene056082:CDS | 20.0% |
| !! | TTATGAAAAGCATAGAAAGA+TGG | - | chr1.4:67577078-67577097 | MS.gene056082:CDS | 25.0% |
| TTTGTACAATAAATACGAGG+AGG | - | chr1.4:67577045-67577064 | MS.gene056082:CDS | 30.0% | |
| ! | ATATTCGAGTTCCATCTAAA+AGG | - | chr1.4:67577131-67577150 | MS.gene056082:CDS | 30.0% |
| ! | TATTCGAGTTCCATCTAAAA+GGG | - | chr1.4:67577132-67577151 | MS.gene056082:CDS | 30.0% |
| AAGATTAGTGTTATGGAGGT+TGG | - | chr1.4:67577217-67577236 | MS.gene056082:CDS | 35.0% | |
| GGAGGTTAAGATTAGTGTTA+TGG | - | chr1.4:67577210-67577229 | MS.gene056082:CDS | 35.0% | |
| GGTTAAGATTAGTGTTATGG+AGG | - | chr1.4:67577213-67577232 | MS.gene056082:CDS | 35.0% | |
| TTCCATCTAAAAGGGATGAT+GGG | - | chr1.4:67577140-67577159 | MS.gene056082:CDS | 35.0% | |
| ! | GAAAAGCATAGAAAGATGGA+AGG | - | chr1.4:67577082-67577101 | MS.gene056082:CDS | 35.0% |
| ATGGCCAACAAAGTGCAAAA+TGG | - | chr1.4:67577013-67577032 | MS.gene056082:CDS | 40.0% | |
| CAACAAAGTGCAAAATGGGA+TGG | - | chr1.4:67577018-67577037 | MS.gene056082:CDS | 40.0% | |
| GGGTGGATGGAAATTGAATT+GGG | - | chr1.4:67577160-67577179 | MS.gene056082:CDS | 40.0% | |
| GTTCCATCTAAAAGGGATGA+TGG | - | chr1.4:67577139-67577158 | MS.gene056082:CDS | 40.0% | |
| TGGCCAACAAAGTGCAAAAT+GGG | - | chr1.4:67577014-67577033 | MS.gene056082:CDS | 40.0% | |
| TGGGTGGATGGAAATTGAAT+TGG | - | chr1.4:67577159-67577178 | MS.gene056082:CDS | 40.0% | |
| TTTCTGTGGTGAAGTTGACA+TGG | - | chr1.4:67577189-67577208 | MS.gene056082:CDS | 40.0% | |
| ! | CATCCCATTTTGCACTTTGT+TGG | + | chr1.4:67577020-67577039 | None:intergenic | 40.0% |
| ! | GAATTGGGTGAGTTTTTCTG+TGG | - | chr1.4:67577175-67577194 | MS.gene056082:CDS | 40.0% |
| ! | GAGGTTGGTTATAGACTGAA+GGG | - | chr1.4:67577232-67577251 | MS.gene056082:CDS | 40.0% |
| ATTGCAACTGATACCTCAGC+TGG | + | chr1.4:67576995-67577014 | None:intergenic | 45.0% | |
| GTTGGTTATAGACTGAAGGG+TGG | - | chr1.4:67577235-67577254 | MS.gene056082:CDS | 45.0% | |
| ! | AGCTGAGGTATCAGTTGCAA+TGG | - | chr1.4:67576994-67577013 | MS.gene056082:CDS | 45.0% |
| ! | CACCCATCATCCCTTTTAGA+TGG | + | chr1.4:67577145-67577164 | None:intergenic | 45.0% |
| ! | GGAGGTTGGTTATAGACTGA+AGG | - | chr1.4:67577231-67577250 | MS.gene056082:CDS | 45.0% |
| !! | CATCTAAAAGGGATGATGGG+TGG | - | chr1.4:67577143-67577162 | MS.gene056082:CDS | 45.0% |
| !! | TAAAAGGGATGATGGGTGGA+TGG | - | chr1.4:67577147-67577166 | MS.gene056082:CDS | 45.0% |
| AAGGGTGGTCTCATCGTTGA+AGG | - | chr1.4:67577250-67577269 | MS.gene056082:CDS | 50.0% | |
| CTGTGGTGAAGTTGACATGG+AGG | - | chr1.4:67577192-67577211 | MS.gene056082:CDS | 50.0% | |
| ACTTGATTCTGCGCCAGCTG+AGG | - | chr1.4:67576979-67576998 | MS.gene056082:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 67576971 | 67577294 | 67576971 | ID=MS.gene056082 |
| chr1.4 | mRNA | 67576971 | 67577294 | 67576971 | ID=MS.gene056082.t1;Parent=MS.gene056082 |
| chr1.4 | exon | 67576971 | 67577294 | 67576971 | ID=MS.gene056082.t1.exon1;Parent=MS.gene056082.t1 |
| chr1.4 | CDS | 67576971 | 67577294 | 67576971 | ID=cds.MS.gene056082.t1;Parent=MS.gene056082.t1 |
| Gene Sequence |
| Protein sequence |
