Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56009.t1 | AAV66071.1 | 99.7 | 370 | 1 | 0 | 1 | 370 | 1 | 370 | 1.40E-216 | 761.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56009.t1 | Q03467 | 91.4 | 371 | 30 | 2 | 1 | 370 | 1 | 370 | 6.8e-201 | 701.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56009.t1 | Q5RLY0 | 99.7 | 370 | 1 | 0 | 1 | 370 | 1 | 370 | 9.8e-217 | 761.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049267 | MS.gene56009 | 0.802266 | 6.09E-49 | -1.69E-46 |
| MS.gene049634 | MS.gene56009 | 0.804512 | 2.09E-49 | -1.69E-46 |
| MS.gene050096 | MS.gene56009 | 0.807993 | 3.85E-50 | -1.69E-46 |
| MS.gene050380 | MS.gene56009 | 0.868618 | 5.71E-66 | -1.69E-46 |
| MS.gene050381 | MS.gene56009 | 0.819398 | 1.19E-52 | -1.69E-46 |
| MS.gene05233 | MS.gene56009 | 0.800058 | 1.72E-48 | -1.69E-46 |
| MS.gene053406 | MS.gene56009 | 0.846226 | 2.48E-59 | -1.69E-46 |
| MS.gene054290 | MS.gene56009 | 0.819252 | 1.28E-52 | -1.69E-46 |
| MS.gene055124 | MS.gene56009 | 0.849769 | 2.61E-60 | -1.69E-46 |
| MS.gene055202 | MS.gene56009 | 0.813147 | 2.97E-51 | -1.69E-46 |
| MS.gene055959 | MS.gene56009 | 0.807938 | 3.96E-50 | -1.69E-46 |
| MS.gene058093 | MS.gene56009 | 0.814426 | 1.55E-51 | -1.69E-46 |
| MS.gene058179 | MS.gene56009 | 0.832819 | 7.60E-56 | -1.69E-46 |
| MS.gene058180 | MS.gene56009 | 0.814003 | 1.92E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene56009 | 0.856433 | 3.23E-62 | -1.69E-46 |
| MS.gene058840 | MS.gene56009 | 0.826035 | 3.38E-54 | -1.69E-46 |
| MS.gene059037 | MS.gene56009 | 0.841227 | 5.40E-58 | -1.69E-46 |
| MS.gene059944 | MS.gene56009 | 0.813709 | 2.23E-51 | -1.69E-46 |
| MS.gene060205 | MS.gene56009 | 0.810499 | 1.12E-50 | -1.69E-46 |
| MS.gene060578 | MS.gene56009 | 0.812811 | 3.51E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56009.t1 | MTR_2g034480 | 97.507 | 361 | 9 | 0 | 10 | 370 | 2 | 362 | 0.0 | 725 |
| MS.gene56009.t1 | MTR_2g034470 | 76.369 | 347 | 78 | 2 | 24 | 370 | 20 | 362 | 0.0 | 539 |
| MS.gene56009.t1 | MTR_2g034470 | 76.970 | 330 | 73 | 1 | 41 | 370 | 1 | 327 | 0.0 | 520 |
| MS.gene56009.t1 | MTR_2g034440 | 77.215 | 316 | 71 | 1 | 33 | 347 | 20 | 335 | 1.03e-180 | 504 |
| MS.gene56009.t1 | MTR_4g076570 | 55.625 | 320 | 137 | 4 | 30 | 346 | 16 | 333 | 1.10e-120 | 353 |
| MS.gene56009.t1 | MTR_4g076470 | 54.518 | 332 | 142 | 4 | 17 | 347 | 5 | 328 | 1.04e-119 | 350 |
| MS.gene56009.t1 | MTR_1g052430 | 55.949 | 311 | 133 | 3 | 35 | 343 | 32 | 340 | 5.78e-119 | 350 |
| MS.gene56009.t1 | MTR_4g076440 | 54.217 | 332 | 143 | 4 | 17 | 347 | 5 | 328 | 1.54e-115 | 339 |
| MS.gene56009.t1 | MTR_4g076430 | 53.614 | 332 | 145 | 4 | 17 | 347 | 5 | 328 | 1.49e-113 | 334 |
| MS.gene56009.t1 | MTR_4g076490 | 51.462 | 342 | 156 | 5 | 10 | 349 | 72 | 405 | 5.37e-112 | 333 |
| MS.gene56009.t1 | MTR_4g076255 | 54.062 | 320 | 136 | 6 | 30 | 347 | 20 | 330 | 1.40e-109 | 324 |
| MS.gene56009.t1 | MTR_4g076500 | 51.438 | 313 | 141 | 6 | 30 | 337 | 72 | 378 | 1.19e-103 | 311 |
| MS.gene56009.t1 | MTR_7g081350 | 44.762 | 315 | 164 | 6 | 35 | 345 | 27 | 335 | 2.61e-81 | 252 |
| MS.gene56009.t1 | MTR_7g081370 | 41.493 | 335 | 177 | 6 | 13 | 345 | 6 | 323 | 4.99e-75 | 235 |
| MS.gene56009.t1 | MTR_5g085580 | 43.385 | 325 | 169 | 9 | 30 | 343 | 20 | 340 | 1.98e-74 | 238 |
| MS.gene56009.t1 | MTR_6g088885 | 36.873 | 339 | 199 | 8 | 35 | 363 | 27 | 360 | 3.21e-70 | 228 |
| MS.gene56009.t1 | MTR_1g056640 | 39.688 | 320 | 178 | 8 | 35 | 343 | 38 | 353 | 2.45e-69 | 226 |
| MS.gene56009.t1 | MTR_4g010200 | 38.580 | 324 | 190 | 6 | 36 | 351 | 34 | 356 | 2.86e-68 | 220 |
| MS.gene56009.t1 | MTR_3g080410 | 41.141 | 333 | 179 | 10 | 33 | 352 | 24 | 352 | 1.17e-67 | 218 |
| MS.gene56009.t1 | MTR_4g114850 | 35.174 | 344 | 200 | 10 | 36 | 367 | 27 | 359 | 1.37e-66 | 216 |
| MS.gene56009.t1 | MTR_4g114850 | 35.174 | 344 | 200 | 10 | 36 | 367 | 27 | 359 | 1.86e-66 | 214 |
| MS.gene56009.t1 | MTR_4g114850 | 35.174 | 344 | 200 | 10 | 36 | 367 | 27 | 359 | 2.17e-66 | 214 |
| MS.gene56009.t1 | MTR_4g069940 | 38.889 | 342 | 195 | 9 | 17 | 347 | 10 | 348 | 6.01e-66 | 216 |
| MS.gene56009.t1 | MTR_4g084480 | 37.429 | 350 | 209 | 7 | 8 | 349 | 5 | 352 | 3.89e-65 | 212 |
| MS.gene56009.t1 | MTR_4g084480 | 37.429 | 350 | 209 | 7 | 8 | 349 | 5 | 352 | 5.49e-65 | 212 |
| MS.gene56009.t1 | MTR_3g116510 | 37.609 | 343 | 200 | 9 | 17 | 348 | 9 | 348 | 1.67e-64 | 212 |
| MS.gene56009.t1 | MTR_4g084480 | 38.123 | 341 | 201 | 7 | 17 | 349 | 7 | 345 | 2.54e-64 | 209 |
| MS.gene56009.t1 | MTR_1g077990 | 37.615 | 327 | 195 | 7 | 28 | 347 | 24 | 348 | 5.30e-64 | 209 |
| MS.gene56009.t1 | MTR_2g086530 | 36.152 | 343 | 197 | 10 | 36 | 362 | 9 | 345 | 5.31e-64 | 208 |
| MS.gene56009.t1 | MTR_2g086530 | 34.807 | 362 | 214 | 10 | 17 | 362 | 11 | 366 | 5.34e-64 | 209 |
| MS.gene56009.t1 | MTR_8g012400 | 35.965 | 342 | 202 | 10 | 22 | 350 | 17 | 354 | 1.76e-63 | 209 |
| MS.gene56009.t1 | MTR_7g053500 | 34.848 | 330 | 199 | 9 | 34 | 350 | 25 | 351 | 1.69e-62 | 207 |
| MS.gene56009.t1 | MTR_1g031900 | 38.372 | 344 | 199 | 7 | 17 | 349 | 6 | 347 | 7.48e-62 | 206 |
| MS.gene56009.t1 | MTR_1g031900 | 38.372 | 344 | 199 | 7 | 17 | 349 | 6 | 347 | 7.93e-62 | 206 |
| MS.gene56009.t1 | MTR_4g052970 | 36.335 | 322 | 195 | 7 | 36 | 349 | 30 | 349 | 9.27e-62 | 203 |
| MS.gene56009.t1 | MTR_1g007810 | 38.150 | 346 | 198 | 10 | 35 | 370 | 16 | 355 | 2.20e-61 | 201 |
| MS.gene56009.t1 | MTR_1g022160 | 36.667 | 330 | 199 | 7 | 31 | 351 | 20 | 348 | 3.36e-61 | 202 |
| MS.gene56009.t1 | MTR_1g022160 | 36.667 | 330 | 199 | 7 | 31 | 351 | 20 | 348 | 2.15e-60 | 202 |
| MS.gene56009.t1 | MTR_1g022160 | 36.667 | 330 | 199 | 7 | 31 | 351 | 20 | 348 | 2.72e-60 | 202 |
| MS.gene56009.t1 | MTR_1g022160 | 36.667 | 330 | 199 | 7 | 31 | 351 | 20 | 348 | 3.19e-60 | 201 |
| MS.gene56009.t1 | MTR_7g026340 | 38.509 | 322 | 182 | 12 | 35 | 347 | 23 | 337 | 5.11e-59 | 197 |
| MS.gene56009.t1 | MTR_5g078200 | 35.989 | 364 | 218 | 9 | 18 | 369 | 5 | 365 | 1.10e-57 | 198 |
| MS.gene56009.t1 | MTR_4g124440 | 34.746 | 354 | 216 | 9 | 9 | 352 | 4 | 352 | 5.38e-57 | 193 |
| MS.gene56009.t1 | MTR_4g132280 | 36.086 | 327 | 194 | 8 | 35 | 349 | 45 | 368 | 8.51e-57 | 193 |
| MS.gene56009.t1 | MTR_4g088155 | 34.125 | 337 | 202 | 10 | 31 | 351 | 19 | 351 | 5.13e-56 | 190 |
| MS.gene56009.t1 | MTR_3g065460 | 35.393 | 356 | 212 | 10 | 17 | 359 | 5 | 355 | 9.69e-55 | 187 |
| MS.gene56009.t1 | MTR_3g083580 | 33.623 | 345 | 213 | 9 | 15 | 347 | 8 | 348 | 5.13e-54 | 186 |
| MS.gene56009.t1 | MTR_5g078200 | 35.821 | 335 | 201 | 8 | 46 | 369 | 1 | 332 | 2.62e-53 | 186 |
| MS.gene56009.t1 | MTR_2g019345 | 36.503 | 326 | 192 | 9 | 33 | 346 | 18 | 340 | 3.88e-53 | 181 |
| MS.gene56009.t1 | MTR_8g085720 | 34.254 | 362 | 220 | 10 | 13 | 363 | 7 | 361 | 1.68e-52 | 181 |
| MS.gene56009.t1 | MTR_2g027560 | 34.146 | 328 | 205 | 6 | 31 | 348 | 24 | 350 | 6.28e-52 | 180 |
| MS.gene56009.t1 | MTR_7g085390 | 31.534 | 352 | 227 | 7 | 17 | 358 | 10 | 357 | 7.62e-51 | 177 |
| MS.gene56009.t1 | MTR_8g092070 | 31.481 | 324 | 213 | 5 | 35 | 350 | 34 | 356 | 3.60e-50 | 177 |
| MS.gene56009.t1 | MTR_4g083500 | 36.607 | 336 | 196 | 12 | 30 | 354 | 39 | 368 | 4.33e-50 | 176 |
| MS.gene56009.t1 | MTR_1g010120 | 32.665 | 349 | 220 | 8 | 17 | 355 | 10 | 353 | 4.24e-49 | 172 |
| MS.gene56009.t1 | MTR_8g102340 | 32.515 | 326 | 172 | 9 | 35 | 350 | 28 | 315 | 7.22e-49 | 171 |
| MS.gene56009.t1 | MTR_3g095050 | 31.124 | 347 | 220 | 9 | 17 | 350 | 14 | 354 | 4.55e-48 | 169 |
| MS.gene56009.t1 | MTR_4g112025 | 31.549 | 355 | 228 | 8 | 17 | 358 | 14 | 366 | 5.05e-48 | 170 |
| MS.gene56009.t1 | MTR_6g032820 | 32.609 | 322 | 203 | 6 | 35 | 344 | 26 | 345 | 1.57e-47 | 167 |
| MS.gene56009.t1 | MTR_8g012400 | 34.783 | 276 | 164 | 9 | 88 | 350 | 2 | 274 | 2.05e-47 | 165 |
| MS.gene56009.t1 | MTR_1g053320 | 30.769 | 351 | 230 | 6 | 14 | 351 | 6 | 356 | 2.89e-47 | 167 |
| MS.gene56009.t1 | MTR_3g108600 | 32.507 | 363 | 207 | 10 | 5 | 355 | 4 | 340 | 8.15e-47 | 166 |
| MS.gene56009.t1 | MTR_7g053500 | 33.696 | 276 | 167 | 9 | 88 | 350 | 2 | 274 | 5.89e-45 | 159 |
| MS.gene56009.t1 | MTR_3g031770 | 31.915 | 329 | 213 | 8 | 28 | 348 | 20 | 345 | 3.79e-44 | 159 |
| MS.gene56009.t1 | MTR_5g081720 | 33.559 | 295 | 177 | 12 | 60 | 343 | 62 | 348 | 1.24e-35 | 134 |
| MS.gene56009.t1 | MTR_4g134280 | 35.470 | 234 | 142 | 5 | 122 | 348 | 2 | 233 | 1.46e-35 | 134 |
| MS.gene56009.t1 | MTR_3g116510 | 37.209 | 215 | 125 | 6 | 143 | 348 | 1 | 214 | 7.02e-35 | 130 |
| MS.gene56009.t1 | MTR_4g036680 | 55.319 | 94 | 40 | 2 | 252 | 343 | 80 | 173 | 1.87e-27 | 108 |
| MS.gene56009.t1 | MTR_4g036680 | 66.667 | 63 | 21 | 0 | 35 | 97 | 22 | 84 | 1.27e-23 | 97.8 |
| MS.gene56009.t1 | MTR_4g036775 | 55.319 | 94 | 40 | 2 | 252 | 343 | 80 | 173 | 5.89e-27 | 107 |
| MS.gene56009.t1 | MTR_4g036775 | 56.790 | 81 | 32 | 1 | 17 | 97 | 7 | 84 | 6.96e-24 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56009.t1 | AT4G16260 | 61.782 | 348 | 124 | 5 | 13 | 356 | 1 | 343 | 3.29e-152 | 432 |
| MS.gene56009.t1 | AT4G16260 | 63.950 | 319 | 107 | 4 | 41 | 356 | 1 | 314 | 7.19e-143 | 408 |
| MS.gene56009.t1 | AT3G57240 | 56.875 | 320 | 127 | 6 | 30 | 347 | 30 | 340 | 1.99e-114 | 337 |
| MS.gene56009.t1 | AT3G57270 | 51.524 | 328 | 152 | 4 | 23 | 347 | 16 | 339 | 1.00e-110 | 327 |
| MS.gene56009.t1 | AT3G57260 | 50.440 | 341 | 156 | 5 | 12 | 347 | 6 | 338 | 3.60e-109 | 323 |
| MS.gene56009.t1 | AT3G57260 | 50.440 | 341 | 156 | 5 | 12 | 347 | 22 | 354 | 3.98e-109 | 323 |
| MS.gene56009.t1 | AT5G56590 | 38.323 | 334 | 186 | 8 | 34 | 353 | 25 | 352 | 4.20e-76 | 244 |
| MS.gene56009.t1 | AT5G20390 | 39.873 | 316 | 179 | 6 | 31 | 341 | 29 | 338 | 2.68e-75 | 237 |
| MS.gene56009.t1 | AT2G16230 | 40.615 | 325 | 184 | 6 | 31 | 347 | 21 | 344 | 1.02e-71 | 232 |
| MS.gene56009.t1 | AT5G20340 | 38.924 | 316 | 182 | 6 | 31 | 341 | 39 | 348 | 2.37e-70 | 224 |
| MS.gene56009.t1 | AT2G26600 | 35.938 | 320 | 196 | 6 | 36 | 347 | 35 | 353 | 8.94e-70 | 224 |
| MS.gene56009.t1 | AT5G20330 | 39.748 | 317 | 180 | 6 | 30 | 341 | 29 | 339 | 1.23e-69 | 222 |
| MS.gene56009.t1 | AT1G33220 | 38.245 | 319 | 185 | 7 | 11 | 324 | 11 | 322 | 3.36e-67 | 216 |
| MS.gene56009.t1 | AT3G15800 | 36.873 | 339 | 202 | 8 | 36 | 364 | 44 | 380 | 3.59e-67 | 218 |
| MS.gene56009.t1 | AT4G26830 | 36.901 | 355 | 206 | 10 | 16 | 359 | 7 | 354 | 2.28e-66 | 217 |
| MS.gene56009.t1 | AT4G26830 | 37.537 | 341 | 196 | 9 | 30 | 359 | 24 | 358 | 2.31e-66 | 217 |
| MS.gene56009.t1 | AT2G05790 | 39.329 | 328 | 186 | 8 | 33 | 350 | 23 | 347 | 3.99e-66 | 217 |
| MS.gene56009.t1 | AT5G55180 | 38.788 | 330 | 181 | 10 | 35 | 350 | 27 | 349 | 6.71e-66 | 216 |
| MS.gene56009.t1 | AT5G55180 | 38.788 | 330 | 181 | 10 | 35 | 350 | 27 | 349 | 7.10e-66 | 216 |
| MS.gene56009.t1 | AT5G42720 | 37.101 | 345 | 205 | 8 | 19 | 352 | 8 | 351 | 2.77e-65 | 214 |
| MS.gene56009.t1 | AT4G29360 | 40.061 | 327 | 184 | 7 | 33 | 350 | 25 | 348 | 7.08e-65 | 215 |
| MS.gene56009.t1 | AT4G29360 | 40.061 | 327 | 184 | 7 | 33 | 350 | 35 | 358 | 7.48e-65 | 215 |
| MS.gene56009.t1 | AT4G34480 | 39.349 | 338 | 192 | 8 | 22 | 348 | 11 | 346 | 1.38e-64 | 209 |
| MS.gene56009.t1 | AT5G20560 | 36.308 | 325 | 196 | 7 | 18 | 337 | 18 | 336 | 2.50e-64 | 208 |
| MS.gene56009.t1 | AT1G77790 | 38.304 | 342 | 194 | 8 | 10 | 343 | 7 | 339 | 8.64e-64 | 207 |
| MS.gene56009.t1 | AT1G32860 | 37.117 | 326 | 191 | 8 | 34 | 348 | 28 | 350 | 6.72e-63 | 207 |
| MS.gene56009.t1 | AT4G34480 | 39.349 | 338 | 192 | 8 | 22 | 348 | 11 | 346 | 8.58e-63 | 209 |
| MS.gene56009.t1 | AT5G42100 | 39.003 | 341 | 188 | 10 | 19 | 346 | 14 | 347 | 1.73e-62 | 206 |
| MS.gene56009.t1 | AT5G42100 | 38.348 | 339 | 193 | 9 | 19 | 346 | 14 | 347 | 2.50e-62 | 206 |
| MS.gene56009.t1 | AT2G01630 | 37.059 | 340 | 197 | 8 | 32 | 359 | 20 | 354 | 2.14e-60 | 199 |
| MS.gene56009.t1 | AT5G24318 | 37.861 | 346 | 194 | 11 | 16 | 346 | 6 | 345 | 4.31e-60 | 198 |
| MS.gene56009.t1 | AT2G01630 | 37.059 | 340 | 197 | 8 | 32 | 359 | 20 | 354 | 6.38e-60 | 200 |
| MS.gene56009.t1 | AT2G01630 | 37.059 | 340 | 197 | 8 | 32 | 359 | 20 | 354 | 3.09e-59 | 199 |
| MS.gene56009.t1 | AT5G24318 | 37.861 | 346 | 194 | 11 | 16 | 346 | 6 | 345 | 3.50e-59 | 198 |
| MS.gene56009.t1 | AT5G24318 | 37.861 | 346 | 194 | 11 | 16 | 346 | 6 | 345 | 4.85e-59 | 198 |
| MS.gene56009.t1 | AT4G18340 | 36.056 | 355 | 205 | 10 | 8 | 348 | 7 | 353 | 9.84e-59 | 195 |
| MS.gene56009.t1 | AT1G77780 | 37.500 | 312 | 185 | 7 | 36 | 343 | 25 | 330 | 1.11e-58 | 194 |
| MS.gene56009.t1 | AT4G18340 | 36.170 | 376 | 220 | 11 | 8 | 368 | 7 | 377 | 1.17e-58 | 195 |
| MS.gene56009.t1 | AT3G07320 | 34.756 | 328 | 198 | 9 | 36 | 350 | 26 | 350 | 5.46e-58 | 195 |
| MS.gene56009.t1 | AT1G11820 | 35.152 | 330 | 199 | 8 | 32 | 349 | 41 | 367 | 5.72e-58 | 193 |
| MS.gene56009.t1 | AT2G27500 | 33.437 | 323 | 206 | 6 | 35 | 349 | 29 | 350 | 8.50e-58 | 192 |
| MS.gene56009.t1 | AT3G61810 | 36.196 | 326 | 188 | 8 | 35 | 348 | 55 | 372 | 1.28e-57 | 192 |
| MS.gene56009.t1 | AT2G27500 | 33.437 | 323 | 206 | 6 | 35 | 349 | 29 | 350 | 1.72e-57 | 192 |
| MS.gene56009.t1 | AT1G11820 | 35.152 | 330 | 199 | 8 | 32 | 349 | 41 | 367 | 7.56e-57 | 192 |
| MS.gene56009.t1 | AT1G11820 | 35.152 | 330 | 199 | 8 | 32 | 349 | 41 | 367 | 1.53e-56 | 192 |
| MS.gene56009.t1 | AT1G30080 | 34.286 | 350 | 214 | 9 | 10 | 346 | 7 | 353 | 2.83e-56 | 189 |
| MS.gene56009.t1 | AT1G30080 | 34.571 | 350 | 213 | 9 | 10 | 346 | 7 | 353 | 4.32e-56 | 189 |
| MS.gene56009.t1 | AT5G58090 | 33.832 | 334 | 208 | 8 | 33 | 356 | 20 | 350 | 1.19e-55 | 189 |
| MS.gene56009.t1 | AT1G66250 | 36.697 | 327 | 193 | 7 | 29 | 343 | 24 | 348 | 1.02e-54 | 187 |
| MS.gene56009.t1 | AT5G18220 | 31.844 | 358 | 233 | 6 | 9 | 358 | 4 | 358 | 4.05e-54 | 186 |
| MS.gene56009.t1 | AT4G17180 | 34.311 | 341 | 205 | 8 | 20 | 348 | 7 | 340 | 6.21e-54 | 185 |
| MS.gene56009.t1 | AT2G26600 | 36.538 | 260 | 156 | 6 | 96 | 347 | 1 | 259 | 1.63e-53 | 179 |
| MS.gene56009.t1 | AT3G46570 | 39.763 | 337 | 184 | 13 | 22 | 346 | 14 | 343 | 3.17e-53 | 180 |
| MS.gene56009.t1 | AT4G14080 | 33.030 | 330 | 206 | 9 | 33 | 350 | 40 | 366 | 9.72e-52 | 179 |
| MS.gene56009.t1 | AT2G19440 | 32.743 | 339 | 215 | 8 | 35 | 363 | 21 | 356 | 1.49e-51 | 179 |
| MS.gene56009.t1 | AT2G19440 | 32.743 | 339 | 215 | 8 | 35 | 363 | 21 | 356 | 1.49e-51 | 179 |
| MS.gene56009.t1 | AT3G55430 | 37.389 | 337 | 191 | 15 | 28 | 354 | 22 | 348 | 2.38e-51 | 177 |
| MS.gene56009.t1 | AT4G31140 | 34.056 | 323 | 202 | 7 | 35 | 348 | 27 | 347 | 1.12e-50 | 176 |
| MS.gene56009.t1 | AT3G23770 | 34.132 | 334 | 204 | 9 | 33 | 352 | 35 | 366 | 3.61e-50 | 175 |
| MS.gene56009.t1 | AT3G13560 | 34.259 | 324 | 198 | 8 | 33 | 344 | 24 | 344 | 7.70e-50 | 175 |
| MS.gene56009.t1 | AT3G13560 | 34.259 | 324 | 198 | 8 | 33 | 344 | 24 | 344 | 7.70e-50 | 175 |
| MS.gene56009.t1 | AT3G13560 | 34.259 | 324 | 198 | 8 | 33 | 344 | 24 | 344 | 7.70e-50 | 175 |
| MS.gene56009.t1 | AT3G13560 | 34.259 | 324 | 198 | 8 | 33 | 344 | 24 | 344 | 7.70e-50 | 175 |
| MS.gene56009.t1 | AT3G13560 | 34.259 | 324 | 198 | 8 | 33 | 344 | 24 | 344 | 7.70e-50 | 175 |
| MS.gene56009.t1 | AT1G64760 | 32.036 | 334 | 214 | 8 | 35 | 358 | 25 | 355 | 5.70e-49 | 172 |
| MS.gene56009.t1 | AT1G64760 | 32.036 | 334 | 214 | 8 | 35 | 358 | 25 | 355 | 5.70e-49 | 172 |
| MS.gene56009.t1 | AT3G04010 | 32.113 | 355 | 226 | 8 | 15 | 358 | 13 | 363 | 1.37e-48 | 171 |
| MS.gene56009.t1 | AT5G20870 | 31.429 | 350 | 224 | 7 | 17 | 351 | 12 | 360 | 3.84e-48 | 170 |
| MS.gene56009.t1 | AT5G58480 | 32.432 | 333 | 212 | 6 | 25 | 347 | 16 | 345 | 4.15e-48 | 169 |
| MS.gene56009.t1 | AT5G64790 | 31.268 | 339 | 220 | 7 | 22 | 350 | 15 | 350 | 9.51e-48 | 169 |
| MS.gene56009.t1 | AT3G24330 | 30.294 | 340 | 226 | 7 | 25 | 354 | 29 | 367 | 1.00e-46 | 166 |
| MS.gene56009.t1 | AT2G27500 | 32.967 | 273 | 174 | 6 | 85 | 349 | 1 | 272 | 4.83e-45 | 157 |
| MS.gene56009.t1 | AT2G39640 | 33.430 | 344 | 213 | 12 | 9 | 346 | 6 | 339 | 5.90e-45 | 162 |
| MS.gene56009.t1 | AT3G55780 | 33.127 | 323 | 194 | 13 | 60 | 366 | 60 | 376 | 1.45e-38 | 142 |
| MS.gene56009.t1 | AT4G34480 | 40.426 | 235 | 129 | 7 | 123 | 348 | 3 | 235 | 3.52e-35 | 133 |
| MS.gene56009.t1 | AT5G24318 | 38.756 | 209 | 115 | 7 | 147 | 346 | 2 | 206 | 2.73e-32 | 124 |
Find 106 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAAGCTTGATATATATTT+TGG | 0.083105 | 2.3:+56335755 | None:intergenic |
| GCTATTGACATGACCCTTAT+TGG | 0.130417 | 2.3:-56335694 | MS.gene56009:CDS |
| CCAGAATTGGAGAAACATTT+TGG | 0.146550 | 2.3:-56335217 | MS.gene56009:CDS |
| CCAAAATGTTTCTCCAATTC+TGG | 0.169992 | 2.3:+56335217 | None:intergenic |
| GGCTTCTCCTCTCCTTCTAT+TGG | 0.189245 | 2.3:-56338204 | MS.gene56009:CDS |
| TCTCCAATTCTGGACTCTTT+TGG | 0.221583 | 2.3:+56335227 | None:intergenic |
| GTCCAGTTGGAGGTTCTTCT+TGG | 0.259905 | 2.3:-56335804 | MS.gene56009:CDS |
| AGGCTTTGAAGGTCGGAATT+TGG | 0.262776 | 2.3:+56335928 | None:intergenic |
| TTACCAACATGGCTAAAATA+AGG | 0.277500 | 2.3:+56335559 | None:intergenic |
| TATACCAAGTATCCAATAAA+AGG | 0.292777 | 2.3:+56335613 | None:intergenic |
| GTTCTTTCAGAAATGATGTT+AGG | 0.293966 | 2.3:-56335648 | MS.gene56009:CDS |
| GCTTCTCCTCTCCTTCTATT+GGG | 0.305499 | 2.3:-56338203 | MS.gene56009:CDS |
| TCTGTAGCCCAAGGCCTTCT+TGG | 0.311724 | 2.3:+56335280 | None:intergenic |
| TCAGGCATTGAACTCATTCT+TGG | 0.314744 | 2.3:-56335955 | MS.gene56009:CDS |
| AAGAAGTACCCATTTGGATT+TGG | 0.328985 | 2.3:-56335172 | MS.gene56009:CDS |
| ACATAGCATCAAACAAGTTT+TGG | 0.348179 | 2.3:+56335461 | None:intergenic |
| TTTCTGAAAGAACCTTTAGA+TGG | 0.356274 | 2.3:+56335658 | None:intergenic |
| AACCAATCCCAGTGTTATCT+AGG | 0.358223 | 2.3:+56335419 | None:intergenic |
| CTAAACGCATTAAGAAATTC+AGG | 0.364769 | 2.3:-56335973 | MS.gene56009:CDS |
| TTTCACTTCACCGGGTGTTA+TGG | 0.366594 | 2.3:-56335506 | MS.gene56009:CDS |
| GCGTTTAGAGCAGCTTGATT+AGG | 0.366865 | 2.3:+56335988 | None:intergenic |
| AGATCTATAACTTCGTTTGC+TGG | 0.370734 | 2.3:+56336051 | None:intergenic |
| GGATTTGGTGGGGAAAGAAA+TGG | 0.371102 | 2.3:-56335157 | MS.gene56009:CDS |
| ATTGTATCAGATGCTCAAAT+AGG | 0.378846 | 2.3:-56336108 | MS.gene56009:intron |
| GATTTGGTGGGGAAAGAAAT+GGG | 0.380181 | 2.3:-56335156 | MS.gene56009:CDS |
| TTGTGAACAATCCCAATAGA+AGG | 0.380689 | 2.3:+56338192 | None:intergenic |
| AGTTGGTGGCTAGGCTTTGA+AGG | 0.409122 | 2.3:+56335917 | None:intergenic |
| AAACAAAAGAAGTACCCATT+TGG | 0.414004 | 2.3:-56335178 | MS.gene56009:CDS |
| GAGGGAATGAGTTTCCAATA+AGG | 0.416360 | 2.3:+56335680 | None:intergenic |
| GAACCAAAAGAGTCCAGAAT+TGG | 0.421071 | 2.3:-56335230 | MS.gene56009:CDS |
| CTCTGATAATGCACGTCAAT+GGG | 0.427457 | 2.3:-56335896 | MS.gene56009:CDS |
| AAGGTACTCCAAGAAGGCCT+TGG | 0.428459 | 2.3:-56335288 | MS.gene56009:CDS |
| AAAGAAATGTACTAAACTTC+TGG | 0.430566 | 2.3:-56335870 | MS.gene56009:CDS |
| AGTATCCAATAAAAGGATCT+AGG | 0.434145 | 2.3:+56335620 | None:intergenic |
| CTTTCCCCACCAAATCCAAA+TGG | 0.434776 | 2.3:+56335163 | None:intergenic |
| CTTCTTTCTTTGCTCCAACC+AGG | 0.443871 | 2.3:-56338238 | MS.gene56009:CDS |
| ATGGTACAAGACGGTCCAAA+TGG | 0.444159 | 2.3:-56335487 | MS.gene56009:CDS |
| AGGAGTATGTTATGGTATGA+TGG | 0.444271 | 2.3:-56336088 | MS.gene56009:CDS |
| ACTCTGATAATGCACGTCAA+TGG | 0.445056 | 2.3:-56335897 | MS.gene56009:CDS |
| TCCAACCAGGAGGTTCTCCT+TGG | 0.446401 | 2.3:-56338225 | MS.gene56009:CDS |
| TTCTTTCAGAAATGATGTTA+GGG | 0.448198 | 2.3:-56335647 | MS.gene56009:CDS |
| ATTGGATACTTGGTATATGC+AGG | 0.452948 | 2.3:-56335607 | MS.gene56009:CDS |
| GTTTGATGCTATGTTGGATT+CGG | 0.455477 | 2.3:-56335452 | MS.gene56009:CDS |
| TTGATTCGTCATGTTGGTAA+AGG | 0.455676 | 2.3:-56335307 | MS.gene56009:CDS |
| TAGATAACACTGGGATTGGT+TGG | 0.456162 | 2.3:-56335417 | MS.gene56009:CDS |
| TACCAACATGGCTAAAATAA+GGG | 0.471112 | 2.3:+56335560 | None:intergenic |
| AAGTACCCATTTGGATTTGG+TGG | 0.473093 | 2.3:-56335169 | MS.gene56009:CDS |
| AAATCTTCATGATCAAATCA+AGG | 0.476242 | 2.3:-56335725 | MS.gene56009:CDS |
| AGCCAAGAAGAACCTCCAAC+TGG | 0.478746 | 2.3:+56335802 | None:intergenic |
| AACTCATTCCCTCCATCTAA+AGG | 0.483297 | 2.3:-56335670 | MS.gene56009:CDS |
| AGTGGTTGGCCCTCTGATGG+AGG | 0.485939 | 2.3:-56335373 | MS.gene56009:CDS |
| AAACTTGTTTGATGCTATGT+TGG | 0.487153 | 2.3:-56335458 | MS.gene56009:CDS |
| CCAAACCTGCTGTGGGAATG+AGG | 0.498024 | 2.3:+56338165 | None:intergenic |
| GGGTAAACATTGACAAGTAA+AGG | 0.501897 | 2.3:+56335580 | None:intergenic |
| GCTCAAATAGGAGTATGTTA+TGG | 0.506502 | 2.3:-56336096 | MS.gene56009:CDS |
| GAGAGTGGTTGGCCCTCTGA+TGG | 0.506895 | 2.3:-56335376 | MS.gene56009:CDS |
| GTGGTTGGCCCTCTGATGGA+GGG | 0.509372 | 2.3:-56335372 | MS.gene56009:CDS |
| GCCCTAGATAACACTGGGAT+TGG | 0.514217 | 2.3:-56335421 | MS.gene56009:CDS |
| AGGGAATGAGTTTCCAATAA+GGG | 0.515316 | 2.3:+56335681 | None:intergenic |
| TGAAAGAACCTTTAGATGGA+GGG | 0.516289 | 2.3:+56335662 | None:intergenic |
| AGGTACTCCAAGAAGGCCTT+GGG | 0.520257 | 2.3:-56335287 | MS.gene56009:CDS |
| CTGAAAGAACCTTTAGATGG+AGG | 0.520278 | 2.3:+56335661 | None:intergenic |
| TTTCCCCACCAAATCCAAAT+GGG | 0.522115 | 2.3:+56335164 | None:intergenic |
| AGATAACACTGGGATTGGTT+GGG | 0.525369 | 2.3:-56335416 | MS.gene56009:CDS |
| GGAGTATGTTATGGTATGAT+GGG | 0.531605 | 2.3:-56336087 | MS.gene56009:CDS |
| CATTATCAGAGTTGGTGGCT+AGG | 0.533624 | 2.3:+56335908 | None:intergenic |
| AGTACCCATTTGGATTTGGT+GGG | 0.536863 | 2.3:-56335168 | MS.gene56009:CDS |
| ACGTGCATTATCAGAGTTGG+TGG | 0.536916 | 2.3:+56335903 | None:intergenic |
| AAAATCAAGTATATTGCAGT+TGG | 0.537070 | 2.3:-56335838 | MS.gene56009:CDS |
| GGTGAAGTGAAAAGAGCATA+AGG | 0.538337 | 2.3:+56335517 | None:intergenic |
| GATAGAGACCAAACCTGCTG+TGG | 0.547425 | 2.3:+56338157 | None:intergenic |
| GATAATTTGATTCGTCATGT+TGG | 0.547650 | 2.3:-56335313 | MS.gene56009:CDS |
| GGTGGCTAGGCTTTGAAGGT+CGG | 0.549115 | 2.3:+56335921 | None:intergenic |
| TTGACGTGCATTATCAGAGT+TGG | 0.556118 | 2.3:+56335900 | None:intergenic |
| GCCAAGGAGAACCTCCTGGT+TGG | 0.558627 | 2.3:+56338224 | None:intergenic |
| TAGAAGGAGAGGAGAAGCCA+AGG | 0.559699 | 2.3:+56338208 | None:intergenic |
| TGGTACAAGACGGTCCAAAT+GGG | 0.563902 | 2.3:-56335486 | MS.gene56009:CDS |
| CTGGTTGGAGCAAAGAAAGA+AGG | 0.564398 | 2.3:+56338239 | None:intergenic |
| AGAAATGGGGAAATTGTCAA+TGG | 0.564590 | 2.3:-56335142 | MS.gene56009:CDS |
| ACCAATCCCAGTGTTATCTA+GGG | 0.567725 | 2.3:+56335420 | None:intergenic |
| ATAAACCTCATTCCCACAGC+AGG | 0.569800 | 2.3:-56338170 | MS.gene56009:intron |
| GTACCCATTTGGATTTGGTG+GGG | 0.578076 | 2.3:-56335167 | MS.gene56009:CDS |
| AGTAGCCGCCCCTCCATCAG+AGG | 0.578903 | 2.3:+56335363 | None:intergenic |
| ATTTGGTGGGGAAAGAAATG+GGG | 0.581919 | 2.3:-56335155 | MS.gene56009:CDS |
| AACAATCCCAATAGAAGGAG+AGG | 0.583975 | 2.3:+56338197 | None:intergenic |
| CCGTCTTGTACCATAACACC+CGG | 0.586536 | 2.3:+56335496 | None:intergenic |
| CTTTCTTTGCTCCAACCAGG+AGG | 0.587925 | 2.3:-56338235 | MS.gene56009:CDS |
| TGGTTGGCCCTCTGATGGAG+GGG | 0.589912 | 2.3:-56335371 | MS.gene56009:CDS |
| CATGCAGCCCTAGATAACAC+TGG | 0.595342 | 2.3:-56335427 | MS.gene56009:CDS |
| GGTAATGAAGTGAGTCCAGT+TGG | 0.595633 | 2.3:-56335817 | MS.gene56009:CDS |
| TGTCGCGCGGGTTACCAACA+TGG | 0.597136 | 2.3:+56335548 | None:intergenic |
| AATGAAGTGAGTCCAGTTGG+AGG | 0.598323 | 2.3:-56335814 | MS.gene56009:CDS |
| TTGGTAAAGGTACTCCAAGA+AGG | 0.598349 | 2.3:-56335294 | MS.gene56009:CDS |
| AGAAGCCAAGGAGAACCTCC+TGG | 0.598809 | 2.3:+56338220 | None:intergenic |
| ATATAAGTTTCTGTAGCCCA+AGG | 0.604662 | 2.3:+56335271 | None:intergenic |
| AACGTTGTTGTATCTGAGAG+TGG | 0.614257 | 2.3:-56335391 | MS.gene56009:CDS |
| TTGGCCCTCTGATGGAGGGG+CGG | 0.614879 | 2.3:-56335368 | MS.gene56009:CDS |
| GTAGCCGCCCCTCCATCAGA+GGG | 0.615453 | 2.3:+56335364 | None:intergenic |
| TCTATAACTTCGTTTGCTGG+TGG | 0.622975 | 2.3:+56336054 | None:intergenic |
| TTGTTGTATCTGAGAGTGGT+TGG | 0.629103 | 2.3:-56335387 | MS.gene56009:CDS |
| ATGCAGCCCTAGATAACACT+GGG | 0.632794 | 2.3:-56335426 | MS.gene56009:CDS |
| AAGGAAGAGATATGTCGCGC+GGG | 0.641550 | 2.3:+56335536 | None:intergenic |
| ATAGAGACCAAACCTGCTGT+GGG | 0.642306 | 2.3:+56338158 | None:intergenic |
| TAAGGAAGAGATATGTCGCG+CGG | 0.673813 | 2.3:+56335535 | None:intergenic |
| AATAAGGGTCATGTCAATAG+CGG | 0.686579 | 2.3:+56335696 | None:intergenic |
| CCGGGTGTTATGGTACAAGA+CGG | 0.687212 | 2.3:-56335496 | MS.gene56009:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTTTTTATTAATAA+CGG | + | chr2.3:56336592-56336611 | None:intergenic | 0.0% |
| !! | ATGACATAATAAAAAAAATA+AGG | - | chr2.3:56335345-56335364 | MS.gene56009:CDS | 10.0% |
| !!! | TTTTATAATAAAAATGGTAT+AGG | + | chr2.3:56337133-56337152 | None:intergenic | 10.0% |
| !! | TATTAATGGAGTATAATTTA+GGG | + | chr2.3:56337060-56337079 | None:intergenic | 15.0% |
| !!! | ATTTTTATTGGTGTTAAATT+AGG | + | chr2.3:56336745-56336764 | None:intergenic | 15.0% |
| !!! | CTTATCATTAATCTTTTTTT+TGG | + | chr2.3:56335597-56335616 | None:intergenic | 15.0% |
| !!! | GTGATTTTTTTTTTAAAAGA+AGG | - | chr2.3:56336486-56336505 | MS.gene56009:intron | 15.0% |
| !!! | TAAAGCTTGATATATATTTT+GGG | + | chr2.3:56337591-56337610 | None:intergenic | 15.0% |
| !!! | TGCATCTATTAATTTTTTTT+AGG | - | chr2.3:56336911-56336930 | MS.gene56009:intron | 15.0% |
| !!! | TTAAAGCTTGATATATATTT+TGG | + | chr2.3:56337592-56337611 | None:intergenic | 15.0% |
| !! | AAAAAAAGCAGTATTATAGA+TGG | + | chr2.3:56336719-56336738 | None:intergenic | 20.0% |
| !! | AATAGTAAAGATGATAGAAA+CGG | + | chr2.3:56336829-56336848 | None:intergenic | 20.0% |
| !! | ATATAACATATACAATGACA+TGG | - | chr2.3:56336543-56336562 | MS.gene56009:intron | 20.0% |
| !! | GCTTAATATGATTCAATTAT+GGG | - | chr2.3:56335923-56335942 | MS.gene56009:CDS | 20.0% |
| !! | GTATTAATGGAGTATAATTT+AGG | + | chr2.3:56337061-56337080 | None:intergenic | 20.0% |
| !! | TAAAATCTTTACACATAACA+TGG | + | chr2.3:56335949-56335968 | None:intergenic | 20.0% |
| !! | TATAAAGTTATCCGAAAAAA+AGG | + | chr2.3:56337083-56337102 | None:intergenic | 20.0% |
| !! | TGATGATATAAGTTATTGTT+GGG | - | chr2.3:56336887-56336906 | MS.gene56009:intron | 20.0% |
| !! | TGCTTAATATGATTCAATTA+TGG | - | chr2.3:56335922-56335941 | MS.gene56009:CDS | 20.0% |
| !!! | ACTTAATTTGAGTGTTTAAA+TGG | + | chr2.3:56337006-56337025 | None:intergenic | 20.0% |
| !!! | ATGAAGATGTCTATTTTTAT+TGG | + | chr2.3:56336757-56336776 | None:intergenic | 20.0% |
| !!! | ATTAATCTTTTTTTTGGTAG+TGG | + | chr2.3:56335591-56335610 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTTAATAGTGTG+AGG | - | chr2.3:56335619-56335638 | MS.gene56009:CDS | 20.0% |
| !!! | CTTAATTTGAGTGTTTAAAT+GGG | + | chr2.3:56337005-56337024 | None:intergenic | 20.0% |
| !!! | TTGATGATATAAGTTATTGT+TGG | - | chr2.3:56336886-56336905 | MS.gene56009:intron | 20.0% |
| !!! | TTTTTTTTTAAAAGAAGGTG+TGG | - | chr2.3:56336491-56336510 | MS.gene56009:intron | 20.0% |
| ! | AAAATCAAGTATATTGCAGT+TGG | - | chr2.3:56337506-56337525 | MS.gene56009:intron | 25.0% |
| ! | AAAGAAATGTACTAAACTTC+TGG | - | chr2.3:56337474-56337493 | MS.gene56009:intron | 25.0% |
| ! | AAATCTTCATGATCAAATCA+AGG | - | chr2.3:56337619-56337638 | MS.gene56009:intron | 25.0% |
| ! | AACAATGCATAAAATATGCA+AGG | - | chr2.3:56335546-56335565 | MS.gene56009:CDS | 25.0% |
| ! | AATTTGGGTGTTTATAAGAT+TGG | - | chr2.3:56336789-56336808 | MS.gene56009:intron | 25.0% |
| ! | AGAAAAAAGTTTAAGTAAGC+CGG | + | chr2.3:56335728-56335747 | None:intergenic | 25.0% |
| ! | TAAAACCTAGTTCAATTTAC+AGG | - | chr2.3:56336315-56336334 | MS.gene56009:intron | 25.0% |
| ! | TATACCAAGTATCCAATAAA+AGG | + | chr2.3:56337734-56337753 | None:intergenic | 25.0% |
| ! | TTCTTTCAGAAATGATGTTA+GGG | - | chr2.3:56337697-56337716 | MS.gene56009:intron | 25.0% |
| !!! | ATATACTTGATTTTGACACT+AGG | + | chr2.3:56337500-56337519 | None:intergenic | 25.0% |
| !!! | ATCCGAAAAAAAGGTATTAA+TGG | + | chr2.3:56337074-56337093 | None:intergenic | 25.0% |
| !!! | CTCCATTAATACCTTTTTTT+CGG | - | chr2.3:56337069-56337088 | MS.gene56009:intron | 25.0% |
| !!! | TATAAGATTGGTGCTTTTAA+TGG | - | chr2.3:56336801-56336820 | MS.gene56009:intron | 25.0% |
| AGTATCCAATAAAAGGATCT+AGG | + | chr2.3:56337727-56337746 | None:intergenic | 30.0% | |
| ATAATGCACAATCCATTAAG+AGG | - | chr2.3:56336453-56336472 | MS.gene56009:intron | 30.0% | |
| ATTGTATCAGATGCTCAAAT+AGG | - | chr2.3:56337236-56337255 | MS.gene56009:intron | 30.0% | |
| CTAAACGCATTAAGAAATTC+AGG | - | chr2.3:56337371-56337390 | MS.gene56009:intron | 30.0% | |
| CTCTATCTTCTATATAGAGA+TGG | - | chr2.3:56335203-56335222 | MS.gene56009:CDS | 30.0% | |
| GACATTTATTTCGAAACGAA+GGG | + | chr2.3:56335835-56335854 | None:intergenic | 30.0% | |
| GTTCTTTCAGAAATGATGTT+AGG | - | chr2.3:56337696-56337715 | MS.gene56009:intron | 30.0% | |
| TACCAACATGGCTAAAATAA+GGG | + | chr2.3:56337787-56337806 | None:intergenic | 30.0% | |
| TTACCAACATGGCTAAAATA+AGG | + | chr2.3:56337788-56337807 | None:intergenic | 30.0% | |
| ! | AAACTTGTTTGATGCTATGT+TGG | - | chr2.3:56337886-56337905 | MS.gene56009:intron | 30.0% |
| ! | ACATAGCATCAAACAAGTTT+TGG | + | chr2.3:56337886-56337905 | None:intergenic | 30.0% |
| ! | AGATCCTTTTATTGGATACT+TGG | - | chr2.3:56337727-56337746 | MS.gene56009:intron | 30.0% |
| ! | GATAATTTGATTCGTCATGT+TGG | - | chr2.3:56338031-56338050 | MS.gene56009:intron | 30.0% |
| ! | TTTCTGAAAGAACCTTTAGA+TGG | + | chr2.3:56337689-56337708 | None:intergenic | 30.0% |
| !! | AAACAAAAGAAGTACCCATT+TGG | - | chr2.3:56338166-56338185 | MS.gene56009:intron | 30.0% |
| !! | AAGGCTCAAAAAGTATTTAC+AGG | + | chr2.3:56335673-56335692 | None:intergenic | 30.0% |
| !! | AGCTTGATATATATTTTGGG+TGG | + | chr2.3:56337588-56337607 | None:intergenic | 30.0% |
| !! | CGTTTGTTATAATAGCAAGT+TGG | - | chr2.3:56335854-56335873 | MS.gene56009:CDS | 30.0% |
| !! | GGGTACTTCTTTTGTTTATT+AGG | + | chr2.3:56338163-56338182 | None:intergenic | 30.0% |
| !! | TGTTATAATAGCAAGTTGGT+CGG | - | chr2.3:56335858-56335877 | MS.gene56009:CDS | 30.0% |
| AAATCCTCAAGTATGGCATA+TGG | - | chr2.3:56336093-56336112 | MS.gene56009:CDS | 35.0% | |
| AATAAGGGTCATGTCAATAG+CGG | + | chr2.3:56337651-56337670 | None:intergenic | 35.0% | |
| ACAAAATAAGTGACATGTGC+CGG | - | chr2.3:56336974-56336993 | MS.gene56009:intron | 35.0% | |
| ACACACCTGTAAATTGAACT+AGG | + | chr2.3:56336323-56336342 | None:intergenic | 35.0% | |
| AGAAATGGGGAAATTGTCAA+TGG | - | chr2.3:56338202-56338221 | MS.gene56009:CDS | 35.0% | |
| AGATCTATAACTTCGTTTGC+TGG | + | chr2.3:56337296-56337315 | None:intergenic | 35.0% | |
| AGGGAATGAGTTTCCAATAA+GGG | + | chr2.3:56337666-56337685 | None:intergenic | 35.0% | |
| ATATAAGTTTCTGTAGCCCA+AGG | + | chr2.3:56338076-56338095 | None:intergenic | 35.0% | |
| ATTGGATACTTGGTATATGC+AGG | - | chr2.3:56337737-56337756 | MS.gene56009:intron | 35.0% | |
| CATCGTGACAACAACAATTT+GGG | - | chr2.3:56336774-56336793 | MS.gene56009:intron | 35.0% | |
| CCAAAATGTTTCTCCAATTC+TGG | + | chr2.3:56338130-56338149 | None:intergenic | 35.0% | |
| CGACATTTATTTCGAAACGA+AGG | + | chr2.3:56335836-56335855 | None:intergenic | 35.0% | |
| GGAGTATGTTATGGTATGAT+GGG | - | chr2.3:56337257-56337276 | MS.gene56009:intron | 35.0% | |
| GGGTAAACATTGACAAGTAA+AGG | + | chr2.3:56337767-56337786 | None:intergenic | 35.0% | |
| GTTTGATGCTATGTTGGATT+CGG | - | chr2.3:56337892-56337911 | MS.gene56009:intron | 35.0% | |
| TCATCGTGACAACAACAATT+TGG | - | chr2.3:56336773-56336792 | MS.gene56009:intron | 35.0% | |
| TGAAAGAACCTTTAGATGGA+GGG | + | chr2.3:56337685-56337704 | None:intergenic | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | - | chr2.3:56335551-56335570 | MS.gene56009:CDS | 35.0% | |
| TGTACGTCTCTCTATAATTG+AGG | + | chr2.3:56336627-56336646 | None:intergenic | 35.0% | |
| TTGTGAACAATCCCAATAGA+AGG | + | chr2.3:56335155-56335174 | None:intergenic | 35.0% | |
| ! | AGGAGTATGTTATGGTATGA+TGG | - | chr2.3:56337256-56337275 | MS.gene56009:intron | 35.0% |
| ! | CCAGAATTGGAGAAACATTT+TGG | - | chr2.3:56338127-56338146 | MS.gene56009:intron | 35.0% |
| ! | GCATACCTAGATCCTTTTAT+TGG | - | chr2.3:56337719-56337738 | MS.gene56009:intron | 35.0% |
| ! | GCTCAAATAGGAGTATGTTA+TGG | - | chr2.3:56337248-56337267 | MS.gene56009:intron | 35.0% |
| ! | TTATGCTCTTTTCACTTCAC+CGG | - | chr2.3:56337829-56337848 | MS.gene56009:intron | 35.0% |
| ! | TTGATTCGTCATGTTGGTAA+AGG | - | chr2.3:56338037-56338056 | MS.gene56009:intron | 35.0% |
| !! | AACAAGTTTTGGTACCCATT+TGG | + | chr2.3:56337875-56337894 | None:intergenic | 35.0% |
| !! | AAGAAGTACCCATTTGGATT+TGG | - | chr2.3:56338172-56338191 | MS.gene56009:CDS | 35.0% |
| !! | GTTATAATAGCAAGTTGGTC+GGG | - | chr2.3:56335859-56335878 | MS.gene56009:CDS | 35.0% |
| !! | TGATATATATTTTGGGTGGC+AGG | + | chr2.3:56337584-56337603 | None:intergenic | 35.0% |
| !! | TTATAATAGCAAGTTGGTCG+GGG | - | chr2.3:56335860-56335879 | MS.gene56009:CDS | 35.0% |
| !!! | ATCTTTTTTTTGGTAGTGGC+TGG | + | chr2.3:56335587-56335606 | None:intergenic | 35.0% |
| !!! | TACCCTTATTTTAGCCATGT+TGG | - | chr2.3:56337782-56337801 | MS.gene56009:intron | 35.0% |
| !!! | TCTTTTTTTTGGTAGTGGCT+GGG | + | chr2.3:56335586-56335605 | None:intergenic | 35.0% |
| AACAATCCCAATAGAAGGAG+AGG | + | chr2.3:56335150-56335169 | None:intergenic | 40.0% | |
| AACCAATCCCAGTGTTATCT+AGG | + | chr2.3:56337928-56337947 | None:intergenic | 40.0% | |
| AACGTTGTTGTATCTGAGAG+TGG | - | chr2.3:56337953-56337972 | MS.gene56009:intron | 40.0% | |
| AACTCATTCCCTCCATCTAA+AGG | - | chr2.3:56337674-56337693 | MS.gene56009:intron | 40.0% | |
| AAGTACCCATTTGGATTTGG+TGG | - | chr2.3:56338175-56338194 | MS.gene56009:CDS | 40.0% | |
| ACCAATCCCAGTGTTATCTA+GGG | + | chr2.3:56337927-56337946 | None:intergenic | 40.0% | |
| ACTAAAGCCACACCTCTTAA+TGG | + | chr2.3:56336468-56336487 | None:intergenic | 40.0% | |
| ATGCCATACTTGAGGATTTG+AGG | + | chr2.3:56336092-56336111 | None:intergenic | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr2.3:56335553-56335572 | MS.gene56009:CDS | 40.0% | |
| CTGAAAGAACCTTTAGATGG+AGG | + | chr2.3:56337686-56337705 | None:intergenic | 40.0% | |
| GAACCAAAAGAGTCCAGAAT+TGG | - | chr2.3:56338114-56338133 | MS.gene56009:intron | 40.0% | |
| GAGAGACGTACACAAACAAT+CGG | - | chr2.3:56336635-56336654 | MS.gene56009:intron | 40.0% | |
| GAGGGAATGAGTTTCCAATA+AGG | + | chr2.3:56337667-56337686 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | - | chr2.3:56335552-56335571 | MS.gene56009:CDS | 40.0% | |
| GCTATTGACATGACCCTTAT+TGG | - | chr2.3:56337650-56337669 | MS.gene56009:intron | 40.0% | |
| TGCCATACTTGAGGATTTGA+GGG | + | chr2.3:56336091-56336110 | None:intergenic | 40.0% | |
| TTGACGTGCATTATCAGAGT+TGG | + | chr2.3:56337447-56337466 | None:intergenic | 40.0% | |
| TTGTTGTATCTGAGAGTGGT+TGG | - | chr2.3:56337957-56337976 | MS.gene56009:intron | 40.0% | |
| TTTCCCCACCAAATCCAAAT+GGG | + | chr2.3:56338183-56338202 | None:intergenic | 40.0% | |
| TTTGAGCCTTGAGATCTGTT+TGG | - | chr2.3:56335683-56335702 | MS.gene56009:CDS | 40.0% | |
| ! | ACTCTGATAATGCACGTCAA+TGG | - | chr2.3:56337447-56337466 | MS.gene56009:intron | 40.0% |
| ! | AGTACCCATTTGGATTTGGT+GGG | - | chr2.3:56338176-56338195 | MS.gene56009:CDS | 40.0% |
| ! | ATTTGGTGGGGAAAGAAATG+GGG | - | chr2.3:56338189-56338208 | MS.gene56009:CDS | 40.0% |
| ! | CTCTGATAATGCACGTCAAT+GGG | - | chr2.3:56337448-56337467 | MS.gene56009:intron | 40.0% |
| ! | GGTGAAGTGAAAAGAGCATA+AGG | + | chr2.3:56337830-56337849 | None:intergenic | 40.0% |
| ! | TAGATAACACTGGGATTGGT+TGG | - | chr2.3:56337927-56337946 | MS.gene56009:intron | 40.0% |
| ! | TATGCTCTTTTCACTTCACC+GGG | - | chr2.3:56337830-56337849 | MS.gene56009:intron | 40.0% |
| ! | TCTATAACTTCGTTTGCTGG+TGG | + | chr2.3:56337293-56337312 | None:intergenic | 40.0% |
| ! | TCTCCAATTCTGGACTCTTT+TGG | + | chr2.3:56338120-56338139 | None:intergenic | 40.0% |
| !! | AGATAACACTGGGATTGGTT+GGG | - | chr2.3:56337928-56337947 | MS.gene56009:intron | 40.0% |
| !! | GATTTGGTGGGGAAAGAAAT+GGG | - | chr2.3:56338188-56338207 | MS.gene56009:CDS | 40.0% |
| !! | TCAGGCATTGAACTCATTCT+TGG | - | chr2.3:56337389-56337408 | MS.gene56009:intron | 40.0% |
| !! | TTGGTAAAGGTACTCCAAGA+AGG | - | chr2.3:56338050-56338069 | MS.gene56009:intron | 40.0% |
| !!! | CTTTTTTTTGGTAGTGGCTG+GGG | + | chr2.3:56335585-56335604 | None:intergenic | 40.0% |
| AATGAAGTGAGTCCAGTTGG+AGG | - | chr2.3:56337530-56337549 | MS.gene56009:intron | 45.0% | |
| ACGTGCATTATCAGAGTTGG+TGG | + | chr2.3:56337444-56337463 | None:intergenic | 45.0% | |
| ATAAACCTCATTCCCACAGC+AGG | - | chr2.3:56335174-56335193 | MS.gene56009:CDS | 45.0% | |
| ATAGAGACCAAACCTGCTGT+GGG | + | chr2.3:56335189-56335208 | None:intergenic | 45.0% | |
| ATGCAGCCCTAGATAACACT+GGG | - | chr2.3:56337918-56337937 | MS.gene56009:intron | 45.0% | |
| ATGGTACAAGACGGTCCAAA+TGG | - | chr2.3:56337857-56337876 | MS.gene56009:intron | 45.0% | |
| CCAGAACCAAACAGATCTCA+AGG | + | chr2.3:56335692-56335711 | None:intergenic | 45.0% | |
| CCTCAAAAGCTTAGCTCAGT+TGG | - | chr2.3:56335520-56335539 | MS.gene56009:CDS | 45.0% | |
| CTGGTTGGAGCAAAGAAAGA+AGG | + | chr2.3:56335108-56335127 | None:intergenic | 45.0% | |
| CTTCTTTCTTTGCTCCAACC+AGG | - | chr2.3:56335106-56335125 | MS.gene56009:CDS | 45.0% | |
| CTTTCCCCACCAAATCCAAA+TGG | + | chr2.3:56338184-56338203 | None:intergenic | 45.0% | |
| GCACAATCCATTAAGAGGTG+TGG | - | chr2.3:56336458-56336477 | MS.gene56009:intron | 45.0% | |
| GCCATACTTGAGGATTTGAG+GGG | + | chr2.3:56336090-56336109 | None:intergenic | 45.0% | |
| GCTTCTCCTCTCCTTCTATT+GGG | - | chr2.3:56335141-56335160 | MS.gene56009:CDS | 45.0% | |
| GGTAATGAAGTGAGTCCAGT+TGG | - | chr2.3:56337527-56337546 | MS.gene56009:intron | 45.0% | |
| TAAGGAAGAGATATGTCGCG+CGG | + | chr2.3:56337812-56337831 | None:intergenic | 45.0% | |
| TCAGCCATATGCCATACTTG+AGG | + | chr2.3:56336100-56336119 | None:intergenic | 45.0% | |
| TCCCCTCAAATCCTCAAGTA+TGG | - | chr2.3:56336086-56336105 | MS.gene56009:CDS | 45.0% | |
| TGGTACAAGACGGTCCAAAT+GGG | - | chr2.3:56337858-56337877 | MS.gene56009:intron | 45.0% | |
| TTTCACTTCACCGGGTGTTA+TGG | - | chr2.3:56337838-56337857 | MS.gene56009:intron | 45.0% | |
| ! | CCAACTGAGCTAAGCTTTTG+AGG | + | chr2.3:56335523-56335542 | None:intergenic | 45.0% |
| ! | CCTTGAGATCTGTTTGGTTC+TGG | - | chr2.3:56335689-56335708 | MS.gene56009:CDS | 45.0% |
| ! | GCGTTTAGAGCAGCTTGATT+AGG | + | chr2.3:56337359-56337378 | None:intergenic | 45.0% |
| !! | AGGCTTTGAAGGTCGGAATT+TGG | + | chr2.3:56337419-56337438 | None:intergenic | 45.0% |
| !! | CATTATCAGAGTTGGTGGCT+AGG | + | chr2.3:56337439-56337458 | None:intergenic | 45.0% |
| !! | GGATTTGGTGGGGAAAGAAA+TGG | - | chr2.3:56338187-56338206 | MS.gene56009:CDS | 45.0% |
| !! | GTACCCATTTGGATTTGGTG+GGG | - | chr2.3:56338177-56338196 | MS.gene56009:CDS | 45.0% |
| !! | TGTTTGGTTCTGGTGAATCG+CGG | - | chr2.3:56335699-56335718 | MS.gene56009:CDS | 45.0% |
| !!! | TTTTTCTTTTATAATAAAAA+TGG | + | chr2.3:56337139-56337158 | None:intergenic | 5.0% |
| !!! | TTTTTCTTTTATAATTAAAA+TGG | + | chr2.3:56337106-56337125 | None:intergenic | 5.0% |
| AAGGAAGAGATATGTCGCGC+GGG | + | chr2.3:56337811-56337830 | None:intergenic | 50.0% | |
| AGCCAAGAAGAACCTCCAAC+TGG | + | chr2.3:56337545-56337564 | None:intergenic | 50.0% | |
| AGGTACTCCAAGAAGGCCTT+GGG | - | chr2.3:56338057-56338076 | MS.gene56009:intron | 50.0% | |
| AGTGTTTAAATGGGCGACGC+CGG | + | chr2.3:56336996-56337015 | None:intergenic | 50.0% | |
| CATGCAGCCCTAGATAACAC+TGG | - | chr2.3:56337917-56337936 | MS.gene56009:intron | 50.0% | |
| CCGTCTTGTACCATAACACC+CGG | + | chr2.3:56337851-56337870 | None:intergenic | 50.0% | |
| CTTTCTTTGCTCCAACCAGG+AGG | - | chr2.3:56335109-56335128 | MS.gene56009:CDS | 50.0% | |
| GATAGAGACCAAACCTGCTG+TGG | + | chr2.3:56335190-56335209 | None:intergenic | 50.0% | |
| GCCCTAGATAACACTGGGAT+TGG | - | chr2.3:56337923-56337942 | MS.gene56009:intron | 50.0% | |
| GGCTTCTCCTCTCCTTCTAT+TGG | - | chr2.3:56335140-56335159 | MS.gene56009:CDS | 50.0% | |
| GTCCAGTTGGAGGTTCTTCT+TGG | - | chr2.3:56337540-56337559 | MS.gene56009:intron | 50.0% | |
| TAGAAGGAGAGGAGAAGCCA+AGG | + | chr2.3:56335139-56335158 | None:intergenic | 50.0% | |
| TTCTGGTGAATCGCGGAAAC+CGG | - | chr2.3:56335706-56335725 | MS.gene56009:CDS | 50.0% | |
| ! | AAGGTACTCCAAGAAGGCCT+TGG | - | chr2.3:56338056-56338075 | MS.gene56009:intron | 50.0% |
| ! | CCGGGTGTTATGGTACAAGA+CGG | - | chr2.3:56337848-56337867 | MS.gene56009:intron | 50.0% |
| !! | AGTTGGTGGCTAGGCTTTGA+AGG | + | chr2.3:56337430-56337449 | None:intergenic | 50.0% |
| AGAAGCCAAGGAGAACCTCC+TGG | + | chr2.3:56335127-56335146 | None:intergenic | 55.0% | |
| AGTGGCTGGGGTTTAAACCC+CGG | + | chr2.3:56335573-56335592 | None:intergenic | 55.0% | |
| CCAAACCTGCTGTGGGAATG+AGG | + | chr2.3:56335182-56335201 | None:intergenic | 55.0% | |
| CCTCATTCCCACAGCAGGTT+TGG | - | chr2.3:56335179-56335198 | MS.gene56009:CDS | 55.0% | |
| TCCAACCAGGAGGTTCTCCT+TGG | - | chr2.3:56335119-56335138 | MS.gene56009:CDS | 55.0% | |
| TCTGTAGCCCAAGGCCTTCT+TGG | + | chr2.3:56338067-56338086 | None:intergenic | 55.0% | |
| !! | GGTGGCTAGGCTTTGAAGGT+CGG | + | chr2.3:56337426-56337445 | None:intergenic | 55.0% |
| GCCAAGGAGAACCTCCTGGT+TGG | + | chr2.3:56335123-56335142 | None:intergenic | 60.0% | |
| ! | AGTGGTTGGCCCTCTGATGG+AGG | - | chr2.3:56337971-56337990 | MS.gene56009:intron | 60.0% |
| ! | GAGAGTGGTTGGCCCTCTGA+TGG | - | chr2.3:56337968-56337987 | MS.gene56009:intron | 60.0% |
| ! | GTGGTTGGCCCTCTGATGGA+GGG | - | chr2.3:56337972-56337991 | MS.gene56009:intron | 60.0% |
| ! | TGGTTGGCCCTCTGATGGAG+GGG | - | chr2.3:56337973-56337992 | MS.gene56009:intron | 60.0% |
| ! | TGTCGCGCGGGTTACCAACA+TGG | + | chr2.3:56337799-56337818 | None:intergenic | 60.0% |
| AGTAGCCGCCCCTCCATCAG+AGG | + | chr2.3:56337984-56338003 | None:intergenic | 65.0% | |
| GTAGCCGCCCCTCCATCAGA+GGG | + | chr2.3:56337983-56338002 | None:intergenic | 65.0% | |
| TTGGCCCTCTGATGGAGGGG+CGG | - | chr2.3:56337976-56337995 | MS.gene56009:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 56335102 | 56338264 | 56335102 | ID=MS.gene56009 |
| chr2.3 | mRNA | 56335102 | 56338264 | 56335102 | ID=MS.gene56009.t1;Parent=MS.gene56009 |
| chr2.3 | exon | 56338171 | 56338264 | 56338171 | ID=MS.gene56009.t1.exon1;Parent=MS.gene56009.t1 |
| chr2.3 | CDS | 56338171 | 56338264 | 56338171 | ID=cds.MS.gene56009.t1;Parent=MS.gene56009.t1 |
| chr2.3 | exon | 56335102 | 56336120 | 56335102 | ID=MS.gene56009.t1.exon2;Parent=MS.gene56009.t1 |
| chr2.3 | CDS | 56335102 | 56336120 | 56335102 | ID=cds.MS.gene56009.t1;Parent=MS.gene56009.t1 |
| Gene Sequence |
| Protein sequence |
