Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58040.t1 | XP_024636874.1 | 97.8 | 857 | 19 | 0 | 1 | 857 | 1 | 857 | 0.00E+00 | 1604.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58040.t1 | A4IFB6 | 25.9 | 854 | 434 | 23 | 35 | 855 | 30 | 717 | 7.7e-46 | 187.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58040.t1 | G7JFC6 | 97.8 | 857 | 19 | 0 | 1 | 857 | 1 | 857 | 0.0e+00 | 1604.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04920 | MS.gene58040 | 0.802779 | 4.77E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene58040 | 0.835182 | 1.95E-56 | -1.69E-46 |
| MS.gene049499 | MS.gene58040 | 0.806799 | 6.90E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene58040 | 0.810693 | 1.02E-50 | -1.69E-46 |
| MS.gene050213 | MS.gene58040 | 0.800512 | 1.39E-48 | -1.69E-46 |
| MS.gene050258 | MS.gene58040 | 0.800741 | 1.25E-48 | -1.69E-46 |
| MS.gene050945 | MS.gene58040 | 0.815258 | 1.01E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene58040 | 0.827837 | 1.25E-54 | -1.69E-46 |
| MS.gene052775 | MS.gene58040 | 0.819773 | 9.74E-53 | -1.69E-46 |
| MS.gene053122 | MS.gene58040 | 0.828925 | 6.85E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene58040 | 0.80418 | 2.45E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene58040 | 0.827013 | 1.98E-54 | -1.69E-46 |
| MS.gene054957 | MS.gene58040 | 0.823432 | 1.39E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene58040 | 0.820293 | 7.40E-53 | -1.69E-46 |
| MS.gene056045 | MS.gene58040 | 0.809044 | 2.30E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene58040 | 0.800222 | 1.59E-48 | -1.69E-46 |
| MS.gene058781 | MS.gene58040 | 0.827141 | 1.84E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene58040 | 0.813036 | 3.14E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene58040 | 0.834783 | 2.45E-56 | -1.69E-46 |
| MS.gene05985 | MS.gene58040 | -0.812137 | 4.93E-51 | -1.69E-46 |
| MS.gene060522 | MS.gene58040 | 0.830539 | 2.77E-55 | -1.69E-46 |
| MS.gene060933 | MS.gene58040 | 0.820827 | 5.58E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene58040 | 0.820997 | 5.10E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene58040 | 0.833117 | 6.41E-56 | -1.69E-46 |
| MS.gene061100 | MS.gene58040 | 0.832391 | 9.71E-56 | -1.69E-46 |
| MS.gene061160 | MS.gene58040 | 0.82627 | 2.97E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58040 | MS.gene065825 | PPI |
| MS.gene58040 | MS.gene004992 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58040.t1 | MTR_4g115350 | 97.783 | 857 | 19 | 0 | 1 | 857 | 1 | 857 | 0.0 | 1716 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58040.t1 | AT5G35430 | 46.970 | 858 | 381 | 13 | 1 | 856 | 1 | 786 | 0.0 | 698 |
Find 192 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTTCAAATTATCTTTCT+AGG | 0.226319 | 8.3:-11728428 | MS.gene58040:CDS |
| GATCCATCCAGTTCCGATTT+AGG | 0.229483 | 8.3:-11728567 | MS.gene58040:CDS |
| TCACAGTCGTCTTGGCTAAA+TGG | 0.235042 | 8.3:+11727136 | None:intergenic |
| TCCAGAATTTACATCTTTCT+AGG | 0.251642 | 8.3:-11727259 | MS.gene58040:CDS |
| GTTGAATTTGAAGACGTAAA+TGG | 0.270621 | 8.3:-11727091 | MS.gene58040:CDS |
| ATCCATCCAGTTCCGATTTA+GGG | 0.273841 | 8.3:-11728566 | MS.gene58040:CDS |
| TGCAAAGACGGTATCGGTTT+TGG | 0.280040 | 8.3:-11730128 | MS.gene58040:CDS |
| CTCTGGACTGTTGGGCAATA+TGG | 0.288023 | 8.3:+11726907 | None:intergenic |
| AAATTATCTTTCTAGGGCTT+TGG | 0.297084 | 8.3:-11728421 | MS.gene58040:CDS |
| CGCCACAATTATAAATTATA+AGG | 0.301160 | 8.3:+11728001 | None:intergenic |
| CGTTGGAAATAAAGTTGCTT+TGG | 0.307451 | 8.3:-11730401 | MS.gene58040:CDS |
| TGCGAAGAATTCTTCTCTTC+AGG | 0.309254 | 8.3:-11727056 | MS.gene58040:CDS |
| TGCTAAGGCATTGCTTCCTT+TGG | 0.311529 | 8.3:+11730375 | None:intergenic |
| GTTGGAAATAAAGTTGCTTT+GGG | 0.320959 | 8.3:-11730400 | MS.gene58040:CDS |
| GAGTTTATTCAGAGAAAATA+TGG | 0.324465 | 8.3:-11730469 | MS.gene58040:intron |
| TACTTATCATATTATTTGTC+TGG | 0.338404 | 8.3:-11727178 | MS.gene58040:CDS |
| ATAATGCAAAGAAGCGTCTT+TGG | 0.339590 | 8.3:+11732699 | None:intergenic |
| ATGTAAATTCTGGAACATTC+TGG | 0.345616 | 8.3:+11727268 | None:intergenic |
| GAGGTTGGAGTTTGCGTTGT+TGG | 0.355655 | 8.3:-11727811 | MS.gene58040:CDS |
| GCCTAGAAAGATGTAAATTC+TGG | 0.359052 | 8.3:+11727258 | None:intergenic |
| TGCTGTAATGTCTGCAATGC+AGG | 0.360550 | 8.3:-11726972 | MS.gene58040:CDS |
| AGCATATGTGGAGCTGGAAT+TGG | 0.364524 | 8.3:-11727338 | MS.gene58040:CDS |
| ATTGATGCCCTTGCCTCCTC+TGG | 0.366433 | 8.3:+11727007 | None:intergenic |
| AACCTCTCTAGGCTATTATC+TGG | 0.370844 | 8.3:-11730168 | MS.gene58040:intron |
| GCTTCTTTGCATTATCAATC+TGG | 0.377573 | 8.3:-11732691 | MS.gene58040:CDS |
| GTTGTGGAAGATCAAATTCC+AGG | 0.383285 | 8.3:-11727766 | MS.gene58040:CDS |
| TTACGACTTAAATTCTTTGA+AGG | 0.383757 | 8.3:+11727550 | None:intergenic |
| CAACACCAAATGCTCTTTCC+AGG | 0.384211 | 8.3:+11728688 | None:intergenic |
| TGCCTGTGTAACCAATATAT+TGG | 0.385512 | 8.3:+11726934 | None:intergenic |
| CATAATACGAGAGGGAGTTC+TGG | 0.398213 | 8.3:+11727416 | None:intergenic |
| AAAGGGGATGATTGCGGTCC+AGG | 0.399591 | 8.3:-11727721 | MS.gene58040:CDS |
| ACAGAAGGGAGGAGCTAGTC+AGG | 0.399864 | 8.3:-11727446 | MS.gene58040:CDS |
| TTGAATACCTTTGGATCGTT+AGG | 0.400570 | 8.3:+11732619 | None:intergenic |
| TCCTTCAAATTATCTTTCTA+GGG | 0.402240 | 8.3:-11728427 | MS.gene58040:CDS |
| GAACTCGACATGATTTGATT+AGG | 0.405082 | 8.3:+11727848 | None:intergenic |
| ACTTACCTGGAAAGAGCATT+TGG | 0.407981 | 8.3:-11728693 | MS.gene58040:CDS |
| TTAGGTCAGGTAAATTCAAA+TGG | 0.408410 | 8.3:-11727481 | MS.gene58040:CDS |
| CTGTCTGATGGCTTTAGAAA+AGG | 0.409270 | 8.3:-11727872 | MS.gene58040:CDS |
| AGTACAAATCGTTTGAAGTC+TGG | 0.409320 | 8.3:-11727619 | MS.gene58040:CDS |
| ACTTGAGAAAGCCAATATAT+TGG | 0.412594 | 8.3:-11726945 | MS.gene58040:CDS |
| CCCATCTTCAGAGAAAGTTC+TGG | 0.420092 | 8.3:+11728512 | None:intergenic |
| ATCCTCCACAGAAGAATTAG+AGG | 0.422192 | 8.3:+11727591 | None:intergenic |
| CTCCTTGATCCACATACGTC+AGG | 0.423689 | 8.3:+11730437 | None:intergenic |
| TCTAGCTAATTTAGCATATG+TGG | 0.425924 | 8.3:-11727350 | MS.gene58040:CDS |
| TCCAGAACTTTCTCTGAAGA+TGG | 0.426206 | 8.3:-11728513 | MS.gene58040:CDS |
| GTTTATGTTGATCTCTTGCT+TGG | 0.437855 | 8.3:-11726869 | MS.gene58040:CDS |
| GGGTGCATTTATTATCAACT+TGG | 0.438451 | 8.3:-11728132 | MS.gene58040:CDS |
| AGGTTGGAGTTTGCGTTGTT+GGG | 0.438726 | 8.3:-11727810 | MS.gene58040:CDS |
| TAGGTCAGGTAAATTCAAAT+GGG | 0.442834 | 8.3:-11727480 | MS.gene58040:CDS |
| AGTAGCAGTAGGTTTAGGTC+AGG | 0.443104 | 8.3:-11727494 | MS.gene58040:CDS |
| TTTATTTAAACTTACTCCAC+TGG | 0.446826 | 8.3:+11726790 | None:intergenic |
| AAGTAATCAGCAGCTTCCTT+TGG | 0.448866 | 8.3:+11727196 | None:intergenic |
| CAAGGCAATAAAGCTATTGA+TGG | 0.449483 | 8.3:-11728208 | MS.gene58040:CDS |
| TGCAGTTTCTGATTCTTACT+AGG | 0.451462 | 8.3:-11728347 | MS.gene58040:CDS |
| GATTGCGGTCCAGGTGAAGA+TGG | 0.452924 | 8.3:-11727712 | MS.gene58040:CDS |
| ACGGAAGAGTCAAATTCATC+TGG | 0.454205 | 8.3:+11730313 | None:intergenic |
| AGTGTGGCCTCTGGACTGTT+GGG | 0.456959 | 8.3:+11726899 | None:intergenic |
| ATTAGCACTTGACCCTAAAT+CGG | 0.466599 | 8.3:+11728554 | None:intergenic |
| CTCGCATGGCGCTGATTCAA+AGG | 0.471008 | 8.3:-11727524 | MS.gene58040:CDS |
| CTCCTTATAATTTATAATTG+TGG | 0.472860 | 8.3:-11728003 | MS.gene58040:CDS |
| TAATTGTGGCGTGCAGCACT+TGG | 0.477869 | 8.3:-11727989 | MS.gene58040:CDS |
| CACTGGGCAGGAACCTAATA+CGG | 0.480274 | 8.3:+11726807 | None:intergenic |
| GAAGATCAAATTCCAGGTAA+TGG | 0.480624 | 8.3:-11727760 | MS.gene58040:CDS |
| TGGACCGCAATCATCCCCTT+TGG | 0.482289 | 8.3:+11727723 | None:intergenic |
| TTGAGGAAAACAATACTTTG+AGG | 0.488148 | 8.3:+11727031 | None:intergenic |
| TGGAGTTTGCGTTGTTGGGT+TGG | 0.488841 | 8.3:-11727806 | MS.gene58040:CDS |
| CCCTTGCCTCCTCTGGCTTG+AGG | 0.491163 | 8.3:+11727014 | None:intergenic |
| GCAATTTCTCACAGTCGTCT+TGG | 0.492027 | 8.3:+11727128 | None:intergenic |
| GATTCCATGTGTCCATTACC+TGG | 0.493805 | 8.3:+11727748 | None:intergenic |
| ACCTGAAAACTGCGGTGCTA+AGG | 0.495151 | 8.3:+11730360 | None:intergenic |
| ACTTGACCCTAAATCGGAAC+TGG | 0.498812 | 8.3:+11728560 | None:intergenic |
| TCCTCAAGCCAGAGGAGGCA+AGG | 0.500133 | 8.3:-11727015 | MS.gene58040:CDS |
| GGTGCATTTATTATCAACTT+GGG | 0.500962 | 8.3:-11728131 | MS.gene58040:CDS |
| ACCGCAATCATCCCCTTTGG+AGG | 0.501986 | 8.3:+11727726 | None:intergenic |
| TCGAGTTCCTTCAGAGAAGA+TGG | 0.504101 | 8.3:-11727833 | MS.gene58040:CDS |
| GCAGCTGCAAGTGCCTTCAC+AGG | 0.506606 | 8.3:+11727310 | None:intergenic |
| AAGTGTGGCCTCTGGACTGT+TGG | 0.507510 | 8.3:+11726898 | None:intergenic |
| GCCCTAGAAAGATAATTTGA+AGG | 0.508022 | 8.3:+11728426 | None:intergenic |
| TGTCTGATGGCTTTAGAAAA+GGG | 0.508915 | 8.3:-11727871 | MS.gene58040:CDS |
| TAATTGTTCGTCGCTGCGGA+AGG | 0.510870 | 8.3:-11728067 | MS.gene58040:CDS |
| GACACATGGAATCCTCCAAA+GGG | 0.513457 | 8.3:-11727738 | MS.gene58040:CDS |
| AAAGATTGATCCCATAAAAG+AGG | 0.514143 | 8.3:-11730092 | MS.gene58040:intron |
| AAACATCGAGCTGCAAGTAT+TGG | 0.514563 | 8.3:+11727955 | None:intergenic |
| CGAGCTTTCCCTGACGTATG+TGG | 0.514974 | 8.3:-11730446 | MS.gene58040:CDS |
| TGAAGTAATTTATAGCATCA+AGG | 0.516031 | 8.3:-11731403 | MS.gene58040:intron |
| TCAAGAGGCACTGCCGAGCA+AGG | 0.516316 | 8.3:+11727668 | None:intergenic |
| GTGCGAATCAAGTTGACAAT+GGG | 0.516578 | 8.3:-11728662 | MS.gene58040:CDS |
| GCCCTCTAATTCTTCTGTGG+AGG | 0.516726 | 8.3:-11727593 | MS.gene58040:CDS |
| ACTGCGGTAAGTGTGGCCTC+TGG | 0.518484 | 8.3:+11726890 | None:intergenic |
| CCAGAACTTTCTCTGAAGAT+GGG | 0.519413 | 8.3:-11728512 | MS.gene58040:CDS |
| TCGCGGTTGGTGGTTGAAGA+AGG | 0.519971 | 8.3:+11732775 | None:intergenic |
| GGAAGGAGAGTCGCGGTTGG+TGG | 0.521129 | 8.3:+11732765 | None:intergenic |
| CTGTAGAAGAGATAATCAAT+TGG | 0.521353 | 8.3:-11727386 | MS.gene58040:CDS |
| TTAAACTTACTCCACTGGGC+AGG | 0.522122 | 8.3:+11726795 | None:intergenic |
| AGATTTATCCTGTGAGAAAG+TGG | 0.526008 | 8.3:+11728026 | None:intergenic |
| GAAAACGCCGTCGTCGACTT+CGG | 0.526520 | 8.3:+11732741 | None:intergenic |
| TACAATATTTAGTGTTGCGA+CGG | 0.531544 | 8.3:+11730294 | None:intergenic |
| TGGGTTCACAAAATTTAACT+AGG | 0.531972 | 8.3:-11728461 | MS.gene58040:CDS |
| CCTTCAGAGAAGATGGAGGT+TGG | 0.536210 | 8.3:-11727826 | MS.gene58040:CDS |
| TAATTTGAAGGAGGGCCCGC+TGG | 0.537167 | 8.3:+11728438 | None:intergenic |
| AGGCCATGTTTATGCGGCAG+AGG | 0.537177 | 8.3:-11727239 | MS.gene58040:CDS |
| TGACTATGCAAAGACGGTAT+CGG | 0.537690 | 8.3:-11730134 | MS.gene58040:CDS |
| GCTCAAGTTGCAACTTTGCA+AGG | 0.542130 | 8.3:-11728370 | MS.gene58040:CDS |
| TTAGGATGTGTTGACTTACC+TGG | 0.542332 | 8.3:-11728706 | MS.gene58040:intron |
| ACAAAATTTAACTAGGCCAG+CGG | 0.543822 | 8.3:-11728454 | MS.gene58040:CDS |
| CTGGAAAGAGCATTTGGTGT+TGG | 0.545410 | 8.3:-11728687 | MS.gene58040:CDS |
| AAAGTTGCTTTGGGGTCCAA+AGG | 0.549173 | 8.3:-11730391 | MS.gene58040:CDS |
| CTTGCCCTCTAATTCTTCTG+TGG | 0.550070 | 8.3:-11727596 | MS.gene58040:CDS |
| TGGGGACACAAAAGAACAGA+AGG | 0.552001 | 8.3:-11727461 | MS.gene58040:CDS |
| TAATTTAGCATATGTGGAGC+TGG | 0.553226 | 8.3:-11727344 | MS.gene58040:CDS |
| TAACTAATTGTTCGTCGCTG+CGG | 0.554213 | 8.3:-11728071 | MS.gene58040:CDS |
| TTATCATATTATTTGTCTGG+AGG | 0.555300 | 8.3:-11727175 | MS.gene58040:CDS |
| CCTCAAGCCAGAGGAGGCAA+GGG | 0.555731 | 8.3:-11727014 | MS.gene58040:CDS |
| TCTACAAGCAGCCCCTCTTG+TGG | 0.557200 | 8.3:-11727912 | MS.gene58040:CDS |
| ATCAGCAGCAGATTCACTAA+TGG | 0.559636 | 8.3:+11728587 | None:intergenic |
| GTCCTCATTCTTCTTCTCGA+AGG | 0.559829 | 8.3:-11728097 | MS.gene58040:CDS |
| TCCCTGACGTATGTGGATCA+AGG | 0.561251 | 8.3:-11730439 | MS.gene58040:CDS |
| ATTGCGGTCCAGGTGAAGAT+GGG | 0.563635 | 8.3:-11727711 | MS.gene58040:CDS |
| TTCAGCCGCCCATCTTCACC+TGG | 0.564293 | 8.3:+11727703 | None:intergenic |
| TTGATGCATCATGGCATGCA+AGG | 0.565171 | 8.3:+11729920 | None:intergenic |
| AGCCAATATATTGGTTACAC+AGG | 0.567649 | 8.3:-11726936 | MS.gene58040:CDS |
| CTTCAAACGATTTGTACTGT+AGG | 0.570669 | 8.3:+11727624 | None:intergenic |
| ATTGCGGAATTCTTCCGAGA+TGG | 0.572442 | 8.3:-11731450 | MS.gene58040:CDS |
| ACTCTCAGAATGCTGTCTGA+TGG | 0.572565 | 8.3:-11727884 | MS.gene58040:CDS |
| CAAAATTTAACTAGGCCAGC+GGG | 0.573602 | 8.3:-11728453 | MS.gene58040:CDS |
| AGTTATCGATGTCCCTTGCT+CGG | 0.573739 | 8.3:-11727681 | MS.gene58040:CDS |
| TCTTTGCATAGTCATGAAGA+TGG | 0.574380 | 8.3:+11730143 | None:intergenic |
| AACATAAACTGCGGTAAGTG+TGG | 0.574544 | 8.3:+11726883 | None:intergenic |
| GAGCCTCTGCCGCATAAACA+TGG | 0.574948 | 8.3:+11727236 | None:intergenic |
| CCGTCGTCGACTTCGGCGGA+AGG | 0.575192 | 8.3:+11732748 | None:intergenic |
| AAAGCTGGCCACTTTCTCAC+AGG | 0.580528 | 8.3:-11728034 | MS.gene58040:CDS |
| AGCAAAACGAGAAGTCAAGC+TGG | 0.582165 | 8.3:-11728313 | MS.gene58040:CDS |
| GCAGATTCACTAATGGTGAC+AGG | 0.584111 | 8.3:+11728594 | None:intergenic |
| CCAACCTCCATCTTCTCTGA+AGG | 0.584845 | 8.3:+11727826 | None:intergenic |
| AGCGTCTTTGGCAAGAGCGA+CGG | 0.587657 | 8.3:+11732711 | None:intergenic |
| AGATTTCAAAATCAGAGCCA+TGG | 0.588061 | 8.3:+11728260 | None:intergenic |
| GACCCTAAATCGGAACTGGA+TGG | 0.589437 | 8.3:+11728564 | None:intergenic |
| TTGCTTGCTGAATAGACCAA+AGG | 0.592584 | 8.3:-11727212 | MS.gene58040:CDS |
| AGAAGAATTCTTCGCAGCAG+TGG | 0.594658 | 8.3:+11727063 | None:intergenic |
| AAAATGGAGGCAACTTGTTG+TGG | 0.594821 | 8.3:-11727782 | MS.gene58040:CDS |
| GGCGGAAGGAGAGTCGCGGT+TGG | 0.596914 | 8.3:+11732762 | None:intergenic |
| TCAATAGCTTTATTGCCTTG+CGG | 0.597488 | 8.3:+11728211 | None:intergenic |
| ACTTCATAATATAGCAATTG+CGG | 0.598887 | 8.3:-11731466 | MS.gene58040:CDS |
| TGGGATCAGAACAACCATCT+CGG | 0.604284 | 8.3:+11731436 | None:intergenic |
| GCAAGTGAAGAGCATTCAAG+AGG | 0.607592 | 8.3:+11727653 | None:intergenic |
| GCGGTCCAGGTGAAGATGGG+CGG | 0.607734 | 8.3:-11727708 | MS.gene58040:CDS |
| AGTTTGGCTAGAGCTTCTTG+TGG | 0.608455 | 8.3:+11726842 | None:intergenic |
| CAAGAGGCACTGCCGAGCAA+GGG | 0.610077 | 8.3:+11727669 | None:intergenic |
| TTATTTAAACTTACTCCACT+GGG | 0.610575 | 8.3:+11726791 | None:intergenic |
| TAGAAAGATAATTTGAAGGA+GGG | 0.612465 | 8.3:+11728430 | None:intergenic |
| CTGAGAGTCGGAGCCACAAG+AGG | 0.612920 | 8.3:+11727899 | None:intergenic |
| AGTGCGAATCAAGTTGACAA+TGG | 0.613308 | 8.3:-11728663 | MS.gene58040:CDS |
| TGAGAGTCGGAGCCACAAGA+GGG | 0.614527 | 8.3:+11727900 | None:intergenic |
| GGAGAGCTAGTTAACAACGT+TGG | 0.616643 | 8.3:-11730418 | MS.gene58040:CDS |
| GTGAGAAATTGCAAGTAGAG+AGG | 0.617140 | 8.3:-11727117 | MS.gene58040:CDS |
| CTTTCTAGGCCATGTTTATG+CGG | 0.617146 | 8.3:-11727245 | MS.gene58040:CDS |
| TCCTTGATCCACATACGTCA+GGG | 0.618812 | 8.3:+11730438 | None:intergenic |
| TCTTCATGACTATGCAAAGA+CGG | 0.619165 | 8.3:-11730140 | MS.gene58040:CDS |
| CTAGAAAGATAATTTGAAGG+AGG | 0.619288 | 8.3:+11728429 | None:intergenic |
| AACGCCGTCGTCGACTTCGG+CGG | 0.619375 | 8.3:+11732744 | None:intergenic |
| GGACACATGGAATCCTCCAA+AGG | 0.619856 | 8.3:-11727739 | MS.gene58040:CDS |
| GGCGTGCAGCACTTGGCTTG+TGG | 0.620925 | 8.3:-11727982 | MS.gene58040:CDS |
| GACATCTTCATAATACGAGA+GGG | 0.621685 | 8.3:+11727408 | None:intergenic |
| TCAGACAGCATTCTGAGAGT+CGG | 0.626085 | 8.3:+11727887 | None:intergenic |
| GCTGTAATGTCTGCAATGCA+GGG | 0.627280 | 8.3:-11726971 | MS.gene58040:CDS |
| AAACAAACCTAACGATCCAA+AGG | 0.627463 | 8.3:-11732626 | MS.gene58040:intron |
| GGAATTGGACAATCCTGTGA+AGG | 0.628752 | 8.3:-11727323 | MS.gene58040:CDS |
| TCCTCCAAAGGGGATGATTG+CGG | 0.629680 | 8.3:-11727727 | MS.gene58040:CDS |
| TGCCTTCGAGAAGAAGAATG+AGG | 0.637009 | 8.3:+11728095 | None:intergenic |
| TGCTCGTGGTAACCACCGCA+AGG | 0.638172 | 8.3:-11728226 | MS.gene58040:CDS |
| AATTCCAGGTAATGGACACA+TGG | 0.638460 | 8.3:-11727752 | MS.gene58040:CDS |
| AGGTCAGGTAAATTCAAATG+GGG | 0.643683 | 8.3:-11727479 | MS.gene58040:CDS |
| ATAGCTTTATTGCCTTGCGG+TGG | 0.644670 | 8.3:+11728214 | None:intergenic |
| TCTCAGCTTGAATATGCTCG+TGG | 0.650885 | 8.3:-11728240 | MS.gene58040:CDS |
| GAATTTGAAGACGTAAATGG+AGG | 0.652933 | 8.3:-11727088 | MS.gene58040:CDS |
| CTGGCGATGAACATTGCACG+TGG | 0.654787 | 8.3:-11728294 | MS.gene58040:CDS |
| TCCTCCACAGAAGAATTAGA+GGG | 0.662228 | 8.3:+11727592 | None:intergenic |
| CCTTCCGCCGAAGTCGACGA+CGG | 0.663917 | 8.3:-11732748 | MS.gene58040:CDS |
| AGACATCTTCATAATACGAG+AGG | 0.664656 | 8.3:+11727407 | None:intergenic |
| TTGGAAATAAAGTTGCTTTG+GGG | 0.665560 | 8.3:-11730399 | MS.gene58040:CDS |
| ACGTGGAAGAGATTCATCCA+TGG | 0.672916 | 8.3:-11728277 | MS.gene58040:CDS |
| CATATTGCCCAACAGTCCAG+AGG | 0.674235 | 8.3:-11726906 | MS.gene58040:CDS |
| CTTCGGCGGAAGGAGAGTCG+CGG | 0.674763 | 8.3:+11732758 | None:intergenic |
| ATCAAGTAATAGAACAGACA+CGG | 0.680364 | 8.3:-11728184 | MS.gene58040:CDS |
| CGTATTAGGTTCCTGCCCAG+TGG | 0.693267 | 8.3:-11726806 | MS.gene58040:CDS |
| GACACAAAAGAACAGAAGGG+AGG | 0.694944 | 8.3:-11727457 | MS.gene58040:CDS |
| GAGAGTCGGAGCCACAAGAG+GGG | 0.698061 | 8.3:+11727901 | None:intergenic |
| AGTTCCTTCAGAGAAGATGG+AGG | 0.705068 | 8.3:-11727830 | MS.gene58040:CDS |
| GGGGACACAAAAGAACAGAA+GGG | 0.706066 | 8.3:-11727460 | MS.gene58040:CDS |
| CAAGAGATCAACATAAACTG+CGG | 0.708853 | 8.3:+11726874 | None:intergenic |
| ACACATGGAATCCTCCAAAG+GGG | 0.737500 | 8.3:-11727737 | MS.gene58040:CDS |
| CTATTTACACCTGAAAACTG+CGG | 0.737778 | 8.3:+11730352 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAGAATTTTAAATGTTT+TGG | - | chr8.3:11727647-11727666 | MS.gene58040:CDS | 10.0% |
| !!! | TTTAGAATTTTAAATGTTTT+GGG | - | chr8.3:11727648-11727667 | MS.gene58040:CDS | 10.0% |
| !!! | TTTCTTTAAAAATTATAATG+GGG | - | chr8.3:11729550-11729569 | MS.gene58040:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTGAG+GGG | - | chr8.3:11730330-11730349 | MS.gene58040:CDS | 10.0% |
| !! | AGTTAATTGAAATTGATATA+AGG | + | chr8.3:11729331-11729350 | None:intergenic | 15.0% |
| !! | GAAAGATAATATTATAAGTT+AGG | - | chr8.3:11728808-11728827 | MS.gene58040:intron | 15.0% |
| !! | TACAATTAGAGAATTTAAAA+AGG | + | chr8.3:11730828-11730847 | None:intergenic | 15.0% |
| !!! | ACTTATTCATGTAAATATTT+TGG | - | chr8.3:11728448-11728467 | MS.gene58040:CDS | 15.0% |
| !!! | CTTATTCATGTAAATATTTT+GGG | - | chr8.3:11728449-11728468 | MS.gene58040:CDS | 15.0% |
| !!! | GAAAGAAAATTTTATTAGAT+CGG | - | chr8.3:11727338-11727357 | MS.gene58040:CDS | 15.0% |
| !!! | TTATTCATGTAAATATTTTG+GGG | - | chr8.3:11728450-11728469 | MS.gene58040:CDS | 15.0% |
| !!! | TTCTTTAAAAATTATAATGG+GGG | - | chr8.3:11729551-11729570 | MS.gene58040:intron | 15.0% |
| !!! | TTTATTTTTTAATGATTGCA+AGG | - | chr8.3:11729730-11729749 | MS.gene58040:intron | 15.0% |
| !! | ACTTGTAAATATTATCTTTC+AGG | + | chr8.3:11728735-11728754 | None:intergenic | 20.0% |
| !! | ATTGAGTAATGATAATATCA+TGG | - | chr8.3:11727571-11727590 | MS.gene58040:CDS | 20.0% |
| !! | ATTTACAAGTTAAGAAATAC+TGG | - | chr8.3:11728745-11728764 | MS.gene58040:intron | 20.0% |
| !! | CTCCTTATAATTTATAATTG+TGG | - | chr8.3:11731583-11731602 | MS.gene58040:intron | 20.0% |
| !! | GAAACTATCAATAACAAATA+AGG | + | chr8.3:11728541-11728560 | None:intergenic | 20.0% |
| !! | GAATAAAACAGTAAAGTAAA+TGG | + | chr8.3:11730477-11730496 | None:intergenic | 20.0% |
| !! | TACGATAATATTATATTAGC+TGG | - | chr8.3:11729707-11729726 | MS.gene58040:intron | 20.0% |
| !! | TACTTATCATATTATTTGTC+TGG | - | chr8.3:11732408-11732427 | MS.gene58040:intron | 20.0% |
| !! | TATTATAAGTTAGGAAATAC+TGG | - | chr8.3:11728817-11728836 | MS.gene58040:intron | 20.0% |
| !! | TGAATATAAAACGTATTTGA+AGG | + | chr8.3:11729001-11729020 | None:intergenic | 20.0% |
| !! | TGAATCATTATTTGTTTGTT+TGG | - | chr8.3:11727763-11727782 | MS.gene58040:CDS | 20.0% |
| !! | TTTAATCACATTAATAGAGA+TGG | + | chr8.3:11730625-11730644 | None:intergenic | 20.0% |
| !! | TTTACATGAATAAGTATCAA+AGG | + | chr8.3:11728443-11728462 | None:intergenic | 20.0% |
| !!! | ACTTTTGTAAACAAAAAGTT+TGG | - | chr8.3:11728405-11728424 | MS.gene58040:CDS | 20.0% |
| !!! | ATTCAGTATGTGATTTATTT+TGG | - | chr8.3:11727887-11727906 | MS.gene58040:CDS | 20.0% |
| !!! | GTATTCTTTTATTCAAATGA+AGG | + | chr8.3:11728592-11728611 | None:intergenic | 20.0% |
| !!! | TACTTATCCTTTTTTTCTTT+GGG | - | chr8.3:11729095-11729114 | MS.gene58040:intron | 20.0% |
| !!! | TCTTAATTTTGTTAGTCAAT+GGG | - | chr8.3:11730781-11730800 | MS.gene58040:intron | 20.0% |
| !!! | TGAGTTTATTTTCTTGATAA+GGG | - | chr8.3:11727425-11727444 | MS.gene58040:CDS | 20.0% |
| !!! | TTCAGTATGTGATTTATTTT+GGG | - | chr8.3:11727888-11727907 | MS.gene58040:CDS | 20.0% |
| !!! | TTCAGTTTTCTAATACATAA+CGG | + | chr8.3:11728317-11728336 | None:intergenic | 20.0% |
| !!! | TTGAGTTTATTTTCTTGATA+AGG | - | chr8.3:11727424-11727443 | MS.gene58040:CDS | 20.0% |
| !!! | TTTCTTACTTCTTTTATTAG+CGG | - | chr8.3:11729811-11729830 | MS.gene58040:intron | 20.0% |
| ! | AAACTCACGCATTAAAATAA+TGG | + | chr8.3:11728564-11728583 | None:intergenic | 25.0% |
| ! | AACTCACGCATTAAAATAAT+GGG | + | chr8.3:11728563-11728582 | None:intergenic | 25.0% |
| ! | AATATACAGAATATAGATCC+TGG | + | chr8.3:11730594-11730613 | None:intergenic | 25.0% |
| ! | ACTTCATAATATAGCAATTG+CGG | - | chr8.3:11728120-11728139 | MS.gene58040:CDS | 25.0% |
| ! | AGACTTAGAAAAAAGAATTG+TGG | + | chr8.3:11728077-11728096 | None:intergenic | 25.0% |
| ! | ATAAACTCCCAAAGAAAAAA+AGG | + | chr8.3:11729105-11729124 | None:intergenic | 25.0% |
| ! | ATAAGGGAGAAGTTTAAAAA+GGG | - | chr8.3:11730280-11730299 | MS.gene58040:intron | 25.0% |
| ! | ATAATAAACAAGGATATACC+AGG | - | chr8.3:11730573-11730592 | MS.gene58040:intron | 25.0% |
| ! | ATCTTTCTGTATTATTACGA+CGG | - | chr8.3:11727704-11727723 | MS.gene58040:CDS | 25.0% |
| ! | CGCCACAATTATAAATTATA+AGG | + | chr8.3:11731588-11731607 | None:intergenic | 25.0% |
| ! | GAGTTTATTCAGAGAAAATA+TGG | - | chr8.3:11729117-11729136 | MS.gene58040:intron | 25.0% |
| ! | TAGAAAGATAATTTGAAGGA+GGG | + | chr8.3:11731159-11731178 | None:intergenic | 25.0% |
| ! | TCCTTCAAATTATCTTTCTA+GGG | - | chr8.3:11731159-11731178 | MS.gene58040:intron | 25.0% |
| ! | TGAAGTAATTTATAGCATCA+AGG | - | chr8.3:11728183-11728202 | MS.gene58040:CDS | 25.0% |
| ! | TGAATTAGATTGAATACCTT+TGG | + | chr8.3:11726979-11726998 | None:intergenic | 25.0% |
| ! | TTACGACTTAAATTCTTTGA+AGG | + | chr8.3:11732039-11732058 | None:intergenic | 25.0% |
| ! | TTATCATATTATTTGTCTGG+AGG | - | chr8.3:11732411-11732430 | MS.gene58040:intron | 25.0% |
| ! | TTATTTAAACTTACTCCACT+GGG | + | chr8.3:11732798-11732817 | None:intergenic | 25.0% |
| ! | TTGAAGTTCCTATATATTTC+AGG | - | chr8.3:11728096-11728115 | MS.gene58040:CDS | 25.0% |
| ! | TTTATTTAAACTTACTCCAC+TGG | + | chr8.3:11732799-11732818 | None:intergenic | 25.0% |
| !! | AATTACTTCAAGCAACTTTT+TGG | + | chr8.3:11728173-11728192 | None:intergenic | 25.0% |
| !! | AGCATTTTTAACAACAATCT+TGG | - | chr8.3:11731433-11731452 | MS.gene58040:CDS | 25.0% |
| !! | ATATACCATACCTCTTTTAT+GGG | + | chr8.3:11729507-11729526 | None:intergenic | 25.0% |
| !! | ATGAAGTACCTGAAATATAT+AGG | + | chr8.3:11728107-11728126 | None:intergenic | 25.0% |
| !! | ATTACTTCAAGCAACTTTTT+GGG | + | chr8.3:11728172-11728191 | None:intergenic | 25.0% |
| !! | GCATTTTTAACAACAATCTT+GGG | - | chr8.3:11731434-11731453 | MS.gene58040:CDS | 25.0% |
| !! | GTCTTAATTTTGTTAGTCAA+TGG | - | chr8.3:11730780-11730799 | MS.gene58040:intron | 25.0% |
| !! | TAGAAAGTATGTGAATTAGT+TGG | - | chr8.3:11727226-11727245 | MS.gene58040:CDS | 25.0% |
| !! | TATATACCATACCTCTTTTA+TGG | + | chr8.3:11729508-11729527 | None:intergenic | 25.0% |
| !! | TTCTTACTTCTTTTATTAGC+GGG | - | chr8.3:11729812-11729831 | MS.gene58040:intron | 25.0% |
| !! | TTGAAATTAGCAATTGGTTT+GGG | - | chr8.3:11730371-11730390 | MS.gene58040:CDS | 25.0% |
| !! | TTTTTCATGTTTGGTATTTG+AGG | - | chr8.3:11728271-11728290 | MS.gene58040:CDS | 25.0% |
| !!! | ATTATTTTAATGCGTGAGTT+TGG | - | chr8.3:11728563-11728582 | MS.gene58040:CDS | 25.0% |
| !!! | ATTTTGTTATTTTCTTCGTG+AGG | - | chr8.3:11727072-11727091 | MS.gene58040:CDS | 25.0% |
| !!! | CTACTTATCCTTTTTTTCTT+TGG | - | chr8.3:11729094-11729113 | MS.gene58040:intron | 25.0% |
| !!! | TAGCTTTAGTTTTTCATGTT+TGG | - | chr8.3:11728262-11728281 | MS.gene58040:CDS | 25.0% |
| !!! | TCAGTATGTGATTTATTTTG+GGG | - | chr8.3:11727889-11727908 | MS.gene58040:CDS | 25.0% |
| !!! | TGAAAGTTTGTTGTAGAATT+GGG | - | chr8.3:11730646-11730665 | MS.gene58040:intron | 25.0% |
| AAAAGTCGAAATAATGACCT+AGG | + | chr8.3:11728391-11728410 | None:intergenic | 30.0% | |
| AAAATGTGCTGCAATTGATA+AGG | - | chr8.3:11730263-11730282 | MS.gene58040:intron | 30.0% | |
| AAAGATTGATCCCATAAAAG+AGG | - | chr8.3:11729494-11729513 | MS.gene58040:intron | 30.0% | |
| AAATGTGCTGCAATTGATAA+GGG | - | chr8.3:11730264-11730283 | MS.gene58040:intron | 30.0% | |
| AATGTTTACCAAGTAAAAGC+TGG | - | chr8.3:11728871-11728890 | MS.gene58040:intron | 30.0% | |
| ACAAGTTAAGAAATACTGGT+GGG | - | chr8.3:11728749-11728768 | MS.gene58040:intron | 30.0% | |
| ACCTAACAGCATAATAAACA+AGG | - | chr8.3:11730563-11730582 | MS.gene58040:intron | 30.0% | |
| ACTTGAGAAAGCCAATATAT+TGG | - | chr8.3:11732641-11732660 | MS.gene58040:CDS | 30.0% | |
| ATCAAGTAATAGAACAGACA+CGG | - | chr8.3:11731402-11731421 | MS.gene58040:intron | 30.0% | |
| ATGAATAAGTATCAAAGGCT+CGG | + | chr8.3:11728438-11728457 | None:intergenic | 30.0% | |
| ATTAAAATGAAGGTAGACCT+AGG | - | chr8.3:11728371-11728390 | MS.gene58040:CDS | 30.0% | |
| CATCTTAATTGCTTCGTATT+AGG | - | chr8.3:11727028-11727047 | MS.gene58040:CDS | 30.0% | |
| CCTCTATTATCATTACTTCT+GGG | - | chr8.3:11730517-11730536 | MS.gene58040:intron | 30.0% | |
| CTAGAAAGATAATTTGAAGG+AGG | + | chr8.3:11731160-11731179 | None:intergenic | 30.0% | |
| CTCCTTCAAATTATCTTTCT+AGG | - | chr8.3:11731158-11731177 | MS.gene58040:intron | 30.0% | |
| CTGTAGAAGAGATAATCAAT+TGG | - | chr8.3:11732200-11732219 | MS.gene58040:intron | 30.0% | |
| CTTGAAATTAGCAATTGGTT+TGG | - | chr8.3:11730370-11730389 | MS.gene58040:CDS | 30.0% | |
| GAAAACGAAATCAAAGCAAT+CGG | + | chr8.3:11727009-11727028 | None:intergenic | 30.0% | |
| GATAAGGGAGAAGTTTAAAA+AGG | - | chr8.3:11730279-11730298 | MS.gene58040:intron | 30.0% | |
| GCTAACTTGAAATTAGCAAT+TGG | - | chr8.3:11730365-11730384 | MS.gene58040:CDS | 30.0% | |
| GGTGCATTTATTATCAACTT+GGG | - | chr8.3:11731455-11731474 | MS.gene58040:CDS | 30.0% | |
| GTTGAATTTGAAGACGTAAA+TGG | - | chr8.3:11732495-11732514 | MS.gene58040:intron | 30.0% | |
| TAAAAAGTTGTAGCCGTATT+AGG | - | chr8.3:11732766-11732785 | MS.gene58040:CDS | 30.0% | |
| TACAAGTTAAGAAATACTGG+TGG | - | chr8.3:11728748-11728767 | MS.gene58040:intron | 30.0% | |
| TACAATATTTAGTGTTGCGA+CGG | + | chr8.3:11729295-11729314 | None:intergenic | 30.0% | |
| TAGGTCAGGTAAATTCAAAT+GGG | - | chr8.3:11732106-11732125 | MS.gene58040:intron | 30.0% | |
| TATTCAACTTAATGCTGTTC+AGG | - | chr8.3:11729015-11729034 | MS.gene58040:intron | 30.0% | |
| TCCAGAATTTACATCTTTCT+AGG | - | chr8.3:11732327-11732346 | MS.gene58040:intron | 30.0% | |
| TCCTCTATTATCATTACTTC+TGG | - | chr8.3:11730516-11730535 | MS.gene58040:intron | 30.0% | |
| TCTAGCTAATTTAGCATATG+TGG | - | chr8.3:11732236-11732255 | MS.gene58040:intron | 30.0% | |
| TCTATTGGTATTCTTAAAGC+AGG | - | chr8.3:11728690-11728709 | MS.gene58040:CDS | 30.0% | |
| TGCTGTATGTGTATATCTAA+GGG | - | chr8.3:11730207-11730226 | MS.gene58040:intron | 30.0% | |
| TGGGTTCACAAAATTTAACT+AGG | - | chr8.3:11731125-11731144 | MS.gene58040:intron | 30.0% | |
| TTAATTTCCCAATTGGCAAA+TGG | - | chr8.3:11728477-11728496 | MS.gene58040:CDS | 30.0% | |
| TTAGGTCAGGTAAATTCAAA+TGG | - | chr8.3:11732105-11732124 | MS.gene58040:intron | 30.0% | |
| TTATGTTCTCTCTTCTGTTA+TGG | - | chr8.3:11728941-11728960 | MS.gene58040:intron | 30.0% | |
| TTCCAATAGTTGTGCTAAAA+GGG | - | chr8.3:11727396-11727415 | MS.gene58040:CDS | 30.0% | |
| TTGAGGAAAACAATACTTTG+AGG | + | chr8.3:11732558-11732577 | None:intergenic | 30.0% | |
| TTGCCAATTGGGAAATTAAT+TGG | + | chr8.3:11728476-11728495 | None:intergenic | 30.0% | |
| TTGCTGTATGTGTATATCTA+AGG | - | chr8.3:11730206-11730225 | MS.gene58040:intron | 30.0% | |
| TTGTTCAAATTCCTTCTTCT+GGG | - | chr8.3:11728665-11728684 | MS.gene58040:CDS | 30.0% | |
| TTTGTATACATGACAGTTAC+TGG | - | chr8.3:11727511-11727530 | MS.gene58040:CDS | 30.0% | |
| TTTGTTCAAATTCCTTCTTC+TGG | - | chr8.3:11728664-11728683 | MS.gene58040:CDS | 30.0% | |
| ! | GCATAAATTGATTTCTCTCT+CGG | + | chr8.3:11730096-11730115 | None:intergenic | 30.0% |
| ! | GTTGGAAATAAAGTTGCTTT+GGG | - | chr8.3:11729186-11729205 | MS.gene58040:intron | 30.0% |
| ! | GTTTTCTTCTATTCCGATTT+TGG | - | chr8.3:11730539-11730558 | MS.gene58040:intron | 30.0% |
| ! | TAAGGGCAATTTTTATGAGT+TGG | - | chr8.3:11727442-11727461 | MS.gene58040:CDS | 30.0% |
| ! | TCCTTGTTTATTATGCTGTT+AGG | + | chr8.3:11730567-11730586 | None:intergenic | 30.0% |
| ! | TCTTACTTCTTTTATTAGCG+GGG | - | chr8.3:11729813-11729832 | MS.gene58040:intron | 30.0% |
| ! | TGAGTGTTTTCAATTGTTGA+AGG | - | chr8.3:11728515-11728534 | MS.gene58040:CDS | 30.0% |
| ! | TGTAAAACTTTCTTGATAGC+TGG | - | chr8.3:11730706-11730725 | MS.gene58040:intron | 30.0% |
| ! | TTGGAAATAAAGTTGCTTTG+GGG | - | chr8.3:11729187-11729206 | MS.gene58040:intron | 30.0% |
| ! | TTGTTACTGATCATTTTGCA+AGG | - | chr8.3:11730431-11730450 | MS.gene58040:CDS | 30.0% |
| !! | AAATTATCTTTCTAGGGCTT+TGG | - | chr8.3:11731165-11731184 | MS.gene58040:intron | 30.0% |
| !! | AATTATAATGGGGGTGTTAA+TGG | - | chr8.3:11729560-11729579 | MS.gene58040:intron | 30.0% |
| !! | ATGTAAATTCTGGAACATTC+TGG | + | chr8.3:11732321-11732340 | None:intergenic | 30.0% |
| !! | CATTGATGCTACTTGATTTT+CGG | - | chr8.3:11727484-11727503 | MS.gene58040:CDS | 30.0% |
| !! | CTGAAAGTTTGTTGTAGAAT+TGG | - | chr8.3:11730645-11730664 | MS.gene58040:intron | 30.0% |
| !! | GTTTTATTCATCTTGTAGAG+AGG | - | chr8.3:11730488-11730507 | MS.gene58040:intron | 30.0% |
| !! | TTTGTTATTTCAACCTCTCT+AGG | - | chr8.3:11729407-11729426 | MS.gene58040:intron | 30.0% |
| !!! | GGATCAATCTTTTGAAATAG+GGG | + | chr8.3:11729486-11729505 | None:intergenic | 30.0% |
| !!! | GGGATCAATCTTTTGAAATA+GGG | + | chr8.3:11729487-11729506 | None:intergenic | 30.0% |
| !!! | GTATGTTACTTTTACACGTA+TGG | - | chr8.3:11728205-11728224 | MS.gene58040:CDS | 30.0% |
| !!! | GTGTTACTTTTCTTCATGAA+TGG | - | chr8.3:11727599-11727618 | MS.gene58040:CDS | 30.0% |
| !!! | TATGTGATTTATTTTGGGGA+TGG | - | chr8.3:11727893-11727912 | MS.gene58040:CDS | 30.0% |
| !!! | TGGGATCAATCTTTTGAAAT+AGG | + | chr8.3:11729488-11729507 | None:intergenic | 30.0% |
| AAACAAACCTAACGATCCAA+AGG | - | chr8.3:11726960-11726979 | MS.gene58040:CDS | 35.0% | |
| AAAGATAACTCAAGGCTTGA+TGG | + | chr8.3:11728030-11728049 | None:intergenic | 35.0% | |
| AAGATAACTCAAGGCTTGAT+GGG | + | chr8.3:11728029-11728048 | None:intergenic | 35.0% | |
| ACAAAATTTAACTAGGCCAG+CGG | - | chr8.3:11731132-11731151 | MS.gene58040:intron | 35.0% | |
| AGACATCTTCATAATACGAG+AGG | + | chr8.3:11732182-11732201 | None:intergenic | 35.0% | |
| AGATTTATCCTGTGAGAAAG+TGG | + | chr8.3:11731563-11731582 | None:intergenic | 35.0% | |
| AGATTTCAAAATCAGAGCCA+TGG | + | chr8.3:11731329-11731348 | None:intergenic | 35.0% | |
| AGCTATTGCAAAATTGAGAC+TGG | + | chr8.3:11728247-11728266 | None:intergenic | 35.0% | |
| AGGTCAGGTAAATTCAAATG+GGG | - | chr8.3:11732107-11732126 | MS.gene58040:intron | 35.0% | |
| ATATCTAAGGGAGATAGGAT+GGG | - | chr8.3:11730219-11730238 | MS.gene58040:intron | 35.0% | |
| ATGCTGTTAGGTACCAAAAT+CGG | + | chr8.3:11730555-11730574 | None:intergenic | 35.0% | |
| ATTAGCACTTGACCCTAAAT+CGG | + | chr8.3:11731035-11731054 | None:intergenic | 35.0% | |
| CAAGAGATCAACATAAACTG+CGG | + | chr8.3:11732715-11732734 | None:intergenic | 35.0% | |
| CAAGGCAATAAAGCTATTGA+TGG | - | chr8.3:11731378-11731397 | MS.gene58040:intron | 35.0% | |
| CAAGTTAAGAAATACTGGTG+GGG | - | chr8.3:11728750-11728769 | MS.gene58040:intron | 35.0% | |
| CACAACGAAAAGATAACTCA+AGG | + | chr8.3:11728038-11728057 | None:intergenic | 35.0% | |
| CATAAAAGTCTACATGCTGT+AGG | + | chr8.3:11728926-11728945 | None:intergenic | 35.0% | |
| CCCAGAAGTAATGATAATAG+AGG | + | chr8.3:11730520-11730539 | None:intergenic | 35.0% | |
| CGACAGCAAGATTAAAATGA+AGG | - | chr8.3:11728361-11728380 | MS.gene58040:CDS | 35.0% | |
| CGTTGGAAATAAAGTTGCTT+TGG | - | chr8.3:11729185-11729204 | MS.gene58040:intron | 35.0% | |
| CTATTTACACCTGAAAACTG+CGG | + | chr8.3:11729237-11729256 | None:intergenic | 35.0% | |
| CTTCAAACGATTTGTACTGT+AGG | + | chr8.3:11731965-11731984 | None:intergenic | 35.0% | |
| GAACTCGACATGATTTGATT+AGG | + | chr8.3:11731741-11731760 | None:intergenic | 35.0% | |
| GAAGATCAAATTCCAGGTAA+TGG | - | chr8.3:11731826-11731845 | MS.gene58040:intron | 35.0% | |
| GAATTTGAAGACGTAAATGG+AGG | - | chr8.3:11732498-11732517 | MS.gene58040:intron | 35.0% | |
| GACATCTTCATAATACGAGA+GGG | + | chr8.3:11732181-11732200 | None:intergenic | 35.0% | |
| GCCCTAGAAAGATAATTTGA+AGG | + | chr8.3:11731163-11731182 | None:intergenic | 35.0% | |
| GCCTAGAAAGATGTAAATTC+TGG | + | chr8.3:11732331-11732350 | None:intergenic | 35.0% | |
| GCTCTTAACAAGCTTGAAAA+TGG | + | chr8.3:11727967-11727986 | None:intergenic | 35.0% | |
| GCTTCTTTGCATTATCAATC+TGG | - | chr8.3:11726895-11726914 | MS.gene58040:CDS | 35.0% | |
| GGGTGAGATACATAAATGTT+GGG | - | chr8.3:11730161-11730180 | MS.gene58040:intron | 35.0% | |
| GGGTGCATTTATTATCAACT+TGG | - | chr8.3:11731454-11731473 | MS.gene58040:CDS | 35.0% | |
| GTGATGTAAGTAACGAGTAT+CGG | - | chr8.3:11727316-11727335 | MS.gene58040:CDS | 35.0% | |
| GTTACTTACATCACATCACA+TGG | + | chr8.3:11727310-11727329 | None:intergenic | 35.0% | |
| GTTCCAATAGTTGTGCTAAA+AGG | - | chr8.3:11727395-11727414 | MS.gene58040:CDS | 35.0% | |
| GTTTATGTTGATCTCTTGCT+TGG | - | chr8.3:11732717-11732736 | MS.gene58040:CDS | 35.0% | |
| TAATTTAGCATATGTGGAGC+TGG | - | chr8.3:11732242-11732261 | MS.gene58040:intron | 35.0% | |
| TATATCTAAGGGAGATAGGA+TGG | - | chr8.3:11730218-11730237 | MS.gene58040:intron | 35.0% | |
| TCCAATAGTTGTGCTAAAAG+GGG | - | chr8.3:11727397-11727416 | MS.gene58040:CDS | 35.0% | |
| TCTTCATGACTATGCAAAGA+CGG | - | chr8.3:11729446-11729465 | MS.gene58040:intron | 35.0% | |
| TCTTTGCATAGTCATGAAGA+TGG | + | chr8.3:11729446-11729465 | None:intergenic | 35.0% | |
| TGAACCCATATCCAAAAACA+TGG | + | chr8.3:11731113-11731132 | None:intergenic | 35.0% | |
| TGAGATTTGTGCATTCTCAT+GGG | - | chr8.3:11730138-11730157 | MS.gene58040:CDS | 35.0% | |
| TGCAGTTTCTGATTCTTACT+AGG | - | chr8.3:11731239-11731258 | MS.gene58040:intron | 35.0% | |
| TGCCTGTGTAACCAATATAT+TGG | + | chr8.3:11732655-11732674 | None:intergenic | 35.0% | |
| TGTGTATATCTAAGGGAGAT+AGG | - | chr8.3:11730214-11730233 | MS.gene58040:intron | 35.0% | |
| TTAAGTCGTAAAAACTCGCA+TGG | - | chr8.3:11732048-11732067 | MS.gene58040:intron | 35.0% | |
| TTGAATACCTTTGGATCGTT+AGG | + | chr8.3:11726970-11726989 | None:intergenic | 35.0% | |
| TTGAGATTTGTGCATTCTCA+TGG | - | chr8.3:11730137-11730156 | MS.gene58040:CDS | 35.0% | |
| TTGATCCCATAAAAGAGGTA+TGG | - | chr8.3:11729499-11729518 | MS.gene58040:intron | 35.0% | |
| ! | AGAGCAAAGGACAATGATTT+TGG | - | chr8.3:11727982-11728001 | MS.gene58040:CDS | 35.0% |
| ! | AGCCAATATATTGGTTACAC+AGG | - | chr8.3:11732650-11732669 | MS.gene58040:CDS | 35.0% |
| ! | AGTACAAATCGTTTGAAGTC+TGG | - | chr8.3:11731967-11731986 | MS.gene58040:intron | 35.0% |
| ! | ATGTTTTCAGAAGGCAAGTT+TGG | - | chr8.3:11731648-11731667 | MS.gene58040:intron | 35.0% |
| ! | TGATTATGCAGCCATGTTTT+TGG | - | chr8.3:11731099-11731118 | MS.gene58040:intron | 35.0% |
| ! | TTTTCAGTAGCAGTAGGTTT+AGG | - | chr8.3:11732087-11732106 | MS.gene58040:intron | 35.0% |
| !! | AAATTAGCAATTGGTTTGGG+TGG | - | chr8.3:11730374-11730393 | MS.gene58040:CDS | 35.0% |
| !! | AATTGCAGCACATTTTGAGT+GGG | + | chr8.3:11730259-11730278 | None:intergenic | 35.0% |
| !! | AGAAGAATTTGAGTTGCAAC+AGG | + | chr8.3:11729929-11729948 | None:intergenic | 35.0% |
| !! | ATAATGCAAAGAAGCGTCTT+TGG | + | chr8.3:11726890-11726909 | None:intergenic | 35.0% |
| !! | CAAAGGACAATGATTTTGGT+GGG | - | chr8.3:11727986-11728005 | MS.gene58040:CDS | 35.0% |
| !! | GATTGGCTGAATGTTTTCAT+TGG | - | chr8.3:11729970-11729989 | MS.gene58040:intron | 35.0% |
| !! | TCAATAGCTTTATTGCCTTG+CGG | + | chr8.3:11731378-11731397 | None:intergenic | 35.0% |
| !! | TGTCTGATGGCTTTAGAAAA+GGG | - | chr8.3:11731715-11731734 | MS.gene58040:intron | 35.0% |
| !! | TTCAAGCTTGTTAAGAGCAA+AGG | - | chr8.3:11727969-11727988 | MS.gene58040:CDS | 35.0% |
| !! | TTTTTGAGGGGATAACTGAA+GGG | - | chr8.3:11730342-11730361 | MS.gene58040:CDS | 35.0% |
| !!! | ACGGCTACAACTTTTTAGTT+TGG | + | chr8.3:11732763-11732782 | None:intergenic | 35.0% |
| !!! | TTTTTTGAGGGGATAACTGA+AGG | - | chr8.3:11730341-11730360 | MS.gene58040:CDS | 35.0% |
| AAAAAGGGAGGGATTACTGA+AGG | - | chr8.3:11730295-11730314 | MS.gene58040:intron | 40.0% | |
| AAAAGGGAGGGATTACTGAA+GGG | - | chr8.3:11730296-11730315 | MS.gene58040:intron | 40.0% | |
| AAACATCGAGCTGCAAGTAT+TGG | + | chr8.3:11731634-11731653 | None:intergenic | 40.0% | |
| AACATAAACTGCGGTAAGTG+TGG | + | chr8.3:11732706-11732725 | None:intergenic | 40.0% | |
| AACCAGATAATAGCCTAGAG+AGG | + | chr8.3:11729423-11729442 | None:intergenic | 40.0% | |
| AACCTCTCTAGGCTATTATC+TGG | - | chr8.3:11729418-11729437 | MS.gene58040:intron | 40.0% | |
| AAGCTAATGTTGGGCATGAT+TGG | - | chr8.3:11729953-11729972 | MS.gene58040:CDS | 40.0% | |
| AAGTAATCAGCAGCTTCCTT+TGG | + | chr8.3:11732393-11732412 | None:intergenic | 40.0% | |
| AATCATGCCCAACATTAGCT+TGG | + | chr8.3:11729954-11729973 | None:intergenic | 40.0% | |
| ACACCAGTTGATCCTTTCAT+TGG | + | chr8.3:11728974-11728993 | None:intergenic | 40.0% | |
| ACCAGTTGATCCTTTCATTG+GGG | + | chr8.3:11728972-11728991 | None:intergenic | 40.0% | |
| ACGGAAGAGTCAAATTCATC+TGG | + | chr8.3:11729276-11729295 | None:intergenic | 40.0% | |
| AGATTTGTGCATTCTCATGG+GGG | - | chr8.3:11730140-11730159 | MS.gene58040:CDS | 40.0% | |
| AGGAAAGAGAACACAGAGTT+AGG | + | chr8.3:11729598-11729617 | None:intergenic | 40.0% | |
| AGGGAGAAGTTTAAAAAGGG+AGG | - | chr8.3:11730283-11730302 | MS.gene58040:intron | 40.0% | |
| ATACTGGGTACAAAAGGTAG+TGG | + | chr8.3:11728625-11728644 | None:intergenic | 40.0% | |
| ATAGTTGCAGACTCTCTGTT+AGG | - | chr8.3:11730746-11730765 | MS.gene58040:intron | 40.0% | |
| ATCAGCAGCAGATTCACTAA+TGG | + | chr8.3:11731002-11731021 | None:intergenic | 40.0% | |
| ATCCATCCAGTTCCGATTTA+GGG | - | chr8.3:11731020-11731039 | MS.gene58040:intron | 40.0% | |
| ATCCTCCACAGAAGAATTAG+AGG | + | chr8.3:11731998-11732017 | None:intergenic | 40.0% | |
| CAAAATTTAACTAGGCCAGC+GGG | - | chr8.3:11731133-11731152 | MS.gene58040:intron | 40.0% | |
| CACAGTATACTGGGTACAAA+AGG | + | chr8.3:11728631-11728650 | None:intergenic | 40.0% | |
| CACCAGTTGATCCTTTCATT+GGG | + | chr8.3:11728973-11728992 | None:intergenic | 40.0% | |
| CCAATAGTTGTGCTAAAAGG+GGG | - | chr8.3:11727398-11727417 | MS.gene58040:CDS | 40.0% | |
| CTCTTTCCTAAAGCAGTCAA+CGG | - | chr8.3:11729609-11729628 | MS.gene58040:intron | 40.0% | |
| CTTCTTCCCAAGCTAATGTT+GGG | - | chr8.3:11729944-11729963 | MS.gene58040:CDS | 40.0% | |
| CTTTCTAGGCCATGTTTATG+CGG | - | chr8.3:11732341-11732360 | MS.gene58040:intron | 40.0% | |
| GAAAGAGAACACAGAGTTAG+GGG | + | chr8.3:11729596-11729615 | None:intergenic | 40.0% | |
| GAAATACTGGTGTAGATGAG+TGG | - | chr8.3:11728830-11728849 | MS.gene58040:intron | 40.0% | |
| GAGATTTGTGCATTCTCATG+GGG | - | chr8.3:11730139-11730158 | MS.gene58040:CDS | 40.0% | |
| GGAAAGAGAACACAGAGTTA+GGG | + | chr8.3:11729597-11729616 | None:intergenic | 40.0% | |
| GGGAGAAGTTTAAAAAGGGA+GGG | - | chr8.3:11730284-11730303 | MS.gene58040:intron | 40.0% | |
| GGGCCAATTAATTTCCCAAT+TGG | - | chr8.3:11728470-11728489 | MS.gene58040:CDS | 40.0% | |
| GGGGTGAGATACATAAATGT+TGG | - | chr8.3:11730160-11730179 | MS.gene58040:CDS | 40.0% | |
| GGTCTATGCACAGAAAATGT+GGG | - | chr8.3:11730182-11730201 | MS.gene58040:intron | 40.0% | |
| GTGAGAAATTGCAAGTAGAG+AGG | - | chr8.3:11732469-11732488 | MS.gene58040:intron | 40.0% | |
| GTTGTGGAAGATCAAATTCC+AGG | - | chr8.3:11731820-11731839 | MS.gene58040:intron | 40.0% | |
| TAAAAGCTGGTGCAGAAGAT+AGG | - | chr8.3:11728884-11728903 | MS.gene58040:intron | 40.0% | |
| TAACTAATTGTTCGTCGCTG+CGG | - | chr8.3:11731515-11731534 | MS.gene58040:intron | 40.0% | |
| TATGGTTTACCCCCAATGAA+AGG | - | chr8.3:11728959-11728978 | MS.gene58040:intron | 40.0% | |
| TCCTCCACAGAAGAATTAGA+GGG | + | chr8.3:11731997-11732016 | None:intergenic | 40.0% | |
| TCTACGCATTGAGAGCTAAA+AGG | + | chr8.3:11727674-11727693 | None:intergenic | 40.0% | |
| TCTTCTTCCCAAGCTAATGT+TGG | - | chr8.3:11729943-11729962 | MS.gene58040:CDS | 40.0% | |
| TGACTATGCAAAGACGGTAT+CGG | - | chr8.3:11729452-11729471 | MS.gene58040:intron | 40.0% | |
| TGCGAAGAATTCTTCTCTTC+AGG | - | chr8.3:11732530-11732549 | MS.gene58040:intron | 40.0% | |
| TTATTAGATCGGCGATGAAG+CGG | - | chr8.3:11727349-11727368 | MS.gene58040:CDS | 40.0% | |
| ! | ATCATGCCCAACATTAGCTT+GGG | + | chr8.3:11729953-11729972 | None:intergenic | 40.0% |
| ! | ATCCTTTATTTGCAGCTGTC+TGG | - | chr8.3:11730018-11730037 | MS.gene58040:intron | 40.0% |
| ! | CAATTGCAGCACATTTTGAG+TGG | + | chr8.3:11730260-11730279 | None:intergenic | 40.0% |
| ! | CTTTTGTACCCAGTATACTG+TGG | - | chr8.3:11728629-11728648 | MS.gene58040:CDS | 40.0% |
| ! | GCAAAGGACAATGATTTTGG+TGG | - | chr8.3:11727985-11728004 | MS.gene58040:CDS | 40.0% |
| ! | TATTGTTTTCCTCAAGCCAG+AGG | - | chr8.3:11732563-11732582 | MS.gene58040:intron | 40.0% |
| ! | TGAGCTGGATCATTTTGCTT+AGG | - | chr8.3:11730862-11730881 | MS.gene58040:intron | 40.0% |
| ! | TTGCTTGCTGAATAGACCAA+AGG | - | chr8.3:11732374-11732393 | MS.gene58040:intron | 40.0% |
| !! | AAAATGGAGGCAACTTGTTG+TGG | - | chr8.3:11731804-11731823 | MS.gene58040:intron | 40.0% |
| !! | AAGGCATTTTCAGTAGCAGT+AGG | - | chr8.3:11732081-11732100 | MS.gene58040:intron | 40.0% |
| !! | AATTCCAGGTAATGGACACA+TGG | - | chr8.3:11731834-11731853 | MS.gene58040:intron | 40.0% |
| !! | ACTTACCTGGAAAGAGCATT+TGG | - | chr8.3:11730893-11730912 | MS.gene58040:intron | 40.0% |
| !! | AGTGCGAATCAAGTTGACAA+TGG | - | chr8.3:11730923-11730942 | MS.gene58040:intron | 40.0% |
| !! | CAGCTGATTTTGATGCATCA+TGG | + | chr8.3:11729678-11729697 | None:intergenic | 40.0% |
| !! | CTGTCTGATGGCTTTAGAAA+AGG | - | chr8.3:11731714-11731733 | MS.gene58040:intron | 40.0% |
| !! | GTGCGAATCAAGTTGACAAT+GGG | - | chr8.3:11730924-11730943 | MS.gene58040:intron | 40.0% |
| !! | TTAGGATGTGTTGACTTACC+TGG | - | chr8.3:11730880-11730899 | MS.gene58040:intron | 40.0% |
| !! | TTGTTGGGTTGGAAAAATGG+AGG | - | chr8.3:11731791-11731810 | MS.gene58040:intron | 40.0% |
| !! | TTTTGAGGGGATAACTGAAG+GGG | - | chr8.3:11730343-11730362 | MS.gene58040:CDS | 40.0% |
| !!! | CTTCTCGTTTTGCTGTTTTC+AGG | + | chr8.3:11731267-11731286 | None:intergenic | 40.0% |
| !!! | GCAGCCATGTTTTTGGATAT+GGG | - | chr8.3:11731106-11731125 | MS.gene58040:intron | 40.0% |
| !!! | TGCAGCCATGTTTTTGGATA+TGG | - | chr8.3:11731105-11731124 | MS.gene58040:intron | 40.0% |
| AAAGGGAGGGATTACTGAAG+GGG | - | chr8.3:11730297-11730316 | MS.gene58040:CDS | 45.0% | |
| ACACATGGAATCCTCCAAAG+GGG | - | chr8.3:11731849-11731868 | MS.gene58040:intron | 45.0% | |
| ACATGTGCACTATTCTGAGC+TGG | - | chr8.3:11730847-11730866 | MS.gene58040:intron | 45.0% | |
| ACCAATAGAGACCCAGAAGA+AGG | + | chr8.3:11728679-11728698 | None:intergenic | 45.0% | |
| ACCGAAGCCATTTGCCAATT+GGG | + | chr8.3:11728487-11728506 | None:intergenic | 45.0% | |
| ACGTGGAAGAGATTCATCCA+TGG | - | chr8.3:11731309-11731328 | MS.gene58040:intron | 45.0% | |
| ACTCTCAGAATGCTGTCTGA+TGG | - | chr8.3:11731702-11731721 | MS.gene58040:intron | 45.0% | |
| ACTTGACCCTAAATCGGAAC+TGG | + | chr8.3:11731029-11731048 | None:intergenic | 45.0% | |
| AGAAGAATTCTTCGCAGCAG+TGG | + | chr8.3:11732526-11732545 | None:intergenic | 45.0% | |
| AGCAAAACGAGAAGTCAAGC+TGG | - | chr8.3:11731273-11731292 | MS.gene58040:intron | 45.0% | |
| AGCATATGTGGAGCTGGAAT+TGG | - | chr8.3:11732248-11732267 | MS.gene58040:intron | 45.0% | |
| AGGTTGGAGTTTGCGTTGTT+GGG | - | chr8.3:11731776-11731795 | MS.gene58040:intron | 45.0% | |
| AGTAGCAGTAGGTTTAGGTC+AGG | - | chr8.3:11732092-11732111 | MS.gene58040:intron | 45.0% | |
| AGTTATCGATGTCCCTTGCT+CGG | - | chr8.3:11731905-11731924 | MS.gene58040:intron | 45.0% | |
| AGTTCCTTCAGAGAAGATGG+AGG | - | chr8.3:11731756-11731775 | MS.gene58040:intron | 45.0% | |
| AGTTTGGCTAGAGCTTCTTG+TGG | + | chr8.3:11732747-11732766 | None:intergenic | 45.0% | |
| ATTGCGGAATTCTTCCGAGA+TGG | - | chr8.3:11728136-11728155 | MS.gene58040:CDS | 45.0% | |
| CAACACCAAATGCTCTTTCC+AGG | + | chr8.3:11730901-11730920 | None:intergenic | 45.0% | |
| CATAATACGAGAGGGAGTTC+TGG | + | chr8.3:11732173-11732192 | None:intergenic | 45.0% | |
| CCAGTTGATCCTTTCATTGG+GGG | + | chr8.3:11728971-11728990 | None:intergenic | 45.0% | |
| CTCCAGACAGCTGCAAATAA+AGG | + | chr8.3:11730023-11730042 | None:intergenic | 45.0% | |
| CTGGTGTAGATGAGTGGAAT+AGG | - | chr8.3:11728836-11728855 | MS.gene58040:intron | 45.0% | |
| CTTGCCCTCTAATTCTTCTG+TGG | - | chr8.3:11731990-11732009 | MS.gene58040:intron | 45.0% | |
| GAAGGAGCAGCAAAAAAAGC+TGG | - | chr8.3:11731537-11731556 | MS.gene58040:intron | 45.0% | |
| GACACAAAAGAACAGAAGGG+AGG | - | chr8.3:11732129-11732148 | MS.gene58040:intron | 45.0% | |
| GACACATGGAATCCTCCAAA+GGG | - | chr8.3:11731848-11731867 | MS.gene58040:intron | 45.0% | |
| GATCCATCCAGTTCCGATTT+AGG | - | chr8.3:11731019-11731038 | MS.gene58040:intron | 45.0% | |
| GATTCCATGTGTCCATTACC+TGG | + | chr8.3:11731841-11731860 | None:intergenic | 45.0% | |
| GATTTGTGCATTCTCATGGG+GGG | - | chr8.3:11730141-11730160 | MS.gene58040:CDS | 45.0% | |
| GCAATTTCTCACAGTCGTCT+TGG | + | chr8.3:11732461-11732480 | None:intergenic | 45.0% | |
| GCAGATTCACTAATGGTGAC+AGG | + | chr8.3:11730995-11731014 | None:intergenic | 45.0% | |
| GCTGTAATGTCTGCAATGCA+GGG | - | chr8.3:11732615-11732634 | MS.gene58040:intron | 45.0% | |
| GGAATTGGACAATCCTGTGA+AGG | - | chr8.3:11732263-11732282 | MS.gene58040:intron | 45.0% | |
| GGAGAGCTAGTTAACAACGT+TGG | - | chr8.3:11729168-11729187 | MS.gene58040:intron | 45.0% | |
| GGGGACACAAAAGAACAGAA+GGG | - | chr8.3:11732126-11732145 | MS.gene58040:intron | 45.0% | |
| GGGTCTATGCACAGAAAATG+TGG | - | chr8.3:11730181-11730200 | MS.gene58040:intron | 45.0% | |
| GTCACCAACCACAGTATACT+GGG | + | chr8.3:11728640-11728659 | None:intergenic | 45.0% | |
| GTCCTCATTCTTCTTCTCGA+AGG | - | chr8.3:11731489-11731508 | MS.gene58040:intron | 45.0% | |
| TACCGAAGCCATTTGCCAAT+TGG | + | chr8.3:11728488-11728507 | None:intergenic | 45.0% | |
| TCACAGTCGTCTTGGCTAAA+TGG | + | chr8.3:11732453-11732472 | None:intergenic | 45.0% | |
| TCCCAATTGGCAAATGGCTT+CGG | - | chr8.3:11728483-11728502 | MS.gene58040:CDS | 45.0% | |
| TCCTTCTTCTGGGTCTCTAT+TGG | - | chr8.3:11728675-11728694 | MS.gene58040:CDS | 45.0% | |
| TCCTTGATCCACATACGTCA+GGG | + | chr8.3:11729151-11729170 | None:intergenic | 45.0% | |
| TCGAGTTCCTTCAGAGAAGA+TGG | - | chr8.3:11731753-11731772 | MS.gene58040:intron | 45.0% | |
| TCTCAGCTTGAATATGCTCG+TGG | - | chr8.3:11731346-11731365 | MS.gene58040:intron | 45.0% | |
| TGCCTTCGAGAAGAAGAATG+AGG | + | chr8.3:11731494-11731513 | None:intergenic | 45.0% | |
| TGCTGTAATGTCTGCAATGC+AGG | - | chr8.3:11732614-11732633 | MS.gene58040:intron | 45.0% | |
| TGGGATCAGAACAACCATCT+CGG | + | chr8.3:11728153-11728172 | None:intergenic | 45.0% | |
| TGGGGACACAAAAGAACAGA+AGG | - | chr8.3:11732125-11732144 | MS.gene58040:intron | 45.0% | |
| TGTACCCAGTATACTGTGGT+TGG | - | chr8.3:11728633-11728652 | MS.gene58040:CDS | 45.0% | |
| TGTCACCAACCACAGTATAC+TGG | + | chr8.3:11728641-11728660 | None:intergenic | 45.0% | |
| TTAAACTTACTCCACTGGGC+AGG | + | chr8.3:11732794-11732813 | None:intergenic | 45.0% | |
| TTGACTTAGAGCTGCACCTT+AGG | + | chr8.3:11727542-11727561 | None:intergenic | 45.0% | |
| TTGATGCATCATGGCATGCA+AGG | + | chr8.3:11729669-11729688 | None:intergenic | 45.0% | |
| ! | ACAGTTACTGGTCTCACCTA+AGG | - | chr8.3:11727523-11727542 | MS.gene58040:CDS | 45.0% |
| ! | ACTTCTTTTATTAGCGGGGC+TGG | - | chr8.3:11729817-11729836 | MS.gene58040:intron | 45.0% |
| ! | CCCCCTTTTAGCACAACTAT+TGG | + | chr8.3:11727401-11727420 | None:intergenic | 45.0% |
| ! | CTTCTGCACCAGCTTTTACT+TGG | + | chr8.3:11728882-11728901 | None:intergenic | 45.0% |
| ! | CTTTATTTGCAGCTGTCTGG+AGG | - | chr8.3:11730021-11730040 | MS.gene58040:intron | 45.0% |
| ! | GCTCAAGTTGCAACTTTGCA+AGG | - | chr8.3:11731216-11731235 | MS.gene58040:intron | 45.0% |
| ! | TCAGACAGCATTCTGAGAGT+CGG | + | chr8.3:11731702-11731721 | None:intergenic | 45.0% |
| ! | TGCAGCTCGATGTTTTCAGA+AGG | - | chr8.3:11731639-11731658 | MS.gene58040:intron | 45.0% |
| !! | AAAGTTGCTTTGGGGTCCAA+AGG | - | chr8.3:11729195-11729214 | MS.gene58040:intron | 45.0% |
| !! | AGCAATTGGTTTGGGTGGTT+TGG | - | chr8.3:11730379-11730398 | MS.gene58040:CDS | 45.0% |
| !! | ATAGCTTTATTGCCTTGCGG+TGG | + | chr8.3:11731375-11731394 | None:intergenic | 45.0% |
| !! | CTGGAAAGAGCATTTGGTGT+TGG | - | chr8.3:11730899-11730918 | MS.gene58040:intron | 45.0% |
| !! | GCAAGTGAAGAGCATTCAAG+AGG | + | chr8.3:11731936-11731955 | None:intergenic | 45.0% |
| !! | GCAATTGGTTTGGGTGGTTT+GGG | - | chr8.3:11730380-11730399 | MS.gene58040:CDS | 45.0% |
| !! | GCGTTGTTGGGTTGGAAAAA+TGG | - | chr8.3:11731788-11731807 | MS.gene58040:intron | 45.0% |
| !! | TGCTAAGGCATTGCTTCCTT+TGG | + | chr8.3:11729214-11729233 | None:intergenic | 45.0% |
| !!! | TGCAAAGACGGTATCGGTTT+TGG | - | chr8.3:11729458-11729477 | MS.gene58040:intron | 45.0% |
| !!! | ATTTTCTTTAAAAATTATAA+TGG | - | chr8.3:11729548-11729567 | MS.gene58040:intron | 5.0% |
| !!! | TTTTCTTTAAAAATTATAAT+GGG | - | chr8.3:11729549-11729568 | MS.gene58040:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTGA+GGG | - | chr8.3:11730329-11730348 | MS.gene58040:CDS | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+AGG | - | chr8.3:11730328-11730347 | MS.gene58040:CDS | 5.0% |
| ATTGCGGTCCAGGTGAAGAT+GGG | - | chr8.3:11731875-11731894 | MS.gene58040:intron | 50.0% | |
| CACTGGGCAGGAACCTAATA+CGG | + | chr8.3:11732782-11732801 | None:intergenic | 50.0% | |
| CATATTGCCCAACAGTCCAG+AGG | - | chr8.3:11732680-11732699 | MS.gene58040:CDS | 50.0% | |
| CCAACCTCCATCTTCTCTGA+AGG | + | chr8.3:11731763-11731782 | None:intergenic | 50.0% | |
| CCCCCAATGAAAGGATCAAC+TGG | - | chr8.3:11728968-11728987 | MS.gene58040:intron | 50.0% | |
| CCTTCAGAGAAGATGGAGGT+TGG | - | chr8.3:11731760-11731779 | MS.gene58040:intron | 50.0% | |
| CTCCTTGATCCACATACGTC+AGG | + | chr8.3:11729152-11729171 | None:intergenic | 50.0% | |
| CTCTGGACTGTTGGGCAATA+TGG | + | chr8.3:11732682-11732701 | None:intergenic | 50.0% | |
| GAAATACTGGTGGGGATGAG+TGG | - | chr8.3:11728758-11728777 | MS.gene58040:intron | 50.0% | |
| GACCCTAAATCGGAACTGGA+TGG | + | chr8.3:11731025-11731044 | None:intergenic | 50.0% | |
| GAGGTTGGAGTTTGCGTTGT+TGG | - | chr8.3:11731775-11731794 | MS.gene58040:intron | 50.0% | |
| GAGTCTGCAACTATGAGTGC+AGG | + | chr8.3:11730740-11730759 | None:intergenic | 50.0% | |
| GCCCTCTAATTCTTCTGTGG+AGG | - | chr8.3:11731993-11732012 | MS.gene58040:intron | 50.0% | |
| GGACACATGGAATCCTCCAA+AGG | - | chr8.3:11731847-11731866 | MS.gene58040:intron | 50.0% | |
| GTGCGTGCATGCATGTATGT+AGG | - | chr8.3:11727790-11727809 | MS.gene58040:CDS | 50.0% | |
| TAATTGTGGCGTGCAGCACT+TGG | - | chr8.3:11731597-11731616 | MS.gene58040:intron | 50.0% | |
| TAATTGTTCGTCGCTGCGGA+AGG | - | chr8.3:11731519-11731538 | MS.gene58040:intron | 50.0% | |
| TCCCTGACGTATGTGGATCA+AGG | - | chr8.3:11729147-11729166 | MS.gene58040:intron | 50.0% | |
| TCCTCCAAAGGGGATGATTG+CGG | - | chr8.3:11731859-11731878 | MS.gene58040:intron | 50.0% | |
| TGGAGTTTGCGTTGTTGGGT+TGG | - | chr8.3:11731780-11731799 | MS.gene58040:intron | 50.0% | |
| TGGCAAATGGCTTCGGTAGA+TGG | - | chr8.3:11728490-11728509 | MS.gene58040:CDS | 50.0% | |
| ! | AAAGCTGGCCACTTTCTCAC+AGG | - | chr8.3:11731552-11731571 | MS.gene58040:intron | 50.0% |
| ! | ACCTGAAAACTGCGGTGCTA+AGG | + | chr8.3:11729229-11729248 | None:intergenic | 50.0% |
| ! | GTAGAGCCGTTGACTGCTTT+AGG | + | chr8.3:11729618-11729637 | None:intergenic | 50.0% |
| ! | TGTTTTCCTCAAGCCAGAGG+AGG | - | chr8.3:11732566-11732585 | MS.gene58040:intron | 50.0% |
| AAAGGGGATGATTGCGGTCC+AGG | - | chr8.3:11731865-11731884 | MS.gene58040:intron | 55.0% | |
| AAGTGTGGCCTCTGGACTGT+TGG | + | chr8.3:11732691-11732710 | None:intergenic | 55.0% | |
| ACAGAAGGGAGGAGCTAGTC+AGG | - | chr8.3:11732140-11732159 | MS.gene58040:intron | 55.0% | |
| ACCGCAATCATCCCCTTTGG+AGG | + | chr8.3:11731863-11731882 | None:intergenic | 55.0% | |
| AGCGTCTTTGGCAAGAGCGA+CGG | + | chr8.3:11726878-11726897 | None:intergenic | 55.0% | |
| AGGCCATGTTTATGCGGCAG+AGG | - | chr8.3:11732347-11732366 | MS.gene58040:intron | 55.0% | |
| AGTGTGGCCTCTGGACTGTT+GGG | + | chr8.3:11732690-11732709 | None:intergenic | 55.0% | |
| ATTGATGCCCTTGCCTCCTC+TGG | + | chr8.3:11732582-11732601 | None:intergenic | 55.0% | |
| CGAGCTTTCCCTGACGTATG+TGG | - | chr8.3:11729140-11729159 | MS.gene58040:intron | 55.0% | |
| CGTATTAGGTTCCTGCCCAG+TGG | - | chr8.3:11732780-11732799 | MS.gene58040:CDS | 55.0% | |
| CTGGCGATGAACATTGCACG+TGG | - | chr8.3:11731292-11731311 | MS.gene58040:intron | 55.0% | |
| CTGGTGGGGATGAGTGGAAT+AGG | - | chr8.3:11728764-11728783 | MS.gene58040:intron | 55.0% | |
| GAGCCTCTGCCGCATAAACA+TGG | + | chr8.3:11732353-11732372 | None:intergenic | 55.0% | |
| GATTGCGGTCCAGGTGAAGA+TGG | - | chr8.3:11731874-11731893 | MS.gene58040:intron | 55.0% | |
| TAATTTGAAGGAGGGCCCGC+TGG | + | chr8.3:11731151-11731170 | None:intergenic | 55.0% | |
| TCTACAAGCAGCCCCTCTTG+TGG | - | chr8.3:11731674-11731693 | MS.gene58040:intron | 55.0% | |
| TGAGAGTCGGAGCCACAAGA+GGG | + | chr8.3:11731689-11731708 | None:intergenic | 55.0% | |
| TGGACCGCAATCATCCCCTT+TGG | + | chr8.3:11731866-11731885 | None:intergenic | 55.0% | |
| ! | GCCTTAGCACCGCAGTTTTC+AGG | - | chr8.3:11729225-11729244 | MS.gene58040:intron | 55.0% |
| ! | GGTGGTTTGGGTCTGGGAAT+TGG | - | chr8.3:11730392-11730411 | MS.gene58040:CDS | 55.0% |
| ! | GGTTTGGGTGGTTTGGGTCT+GGG | - | chr8.3:11730386-11730405 | MS.gene58040:CDS | 55.0% |
| ! | TGGTTTGGGTGGTTTGGGTC+TGG | - | chr8.3:11730385-11730404 | MS.gene58040:CDS | 55.0% |
| !! | CTCGCATGGCGCTGATTCAA+AGG | - | chr8.3:11732062-11732081 | MS.gene58040:intron | 55.0% |
| !! | GAAAACGCCGTCGTCGACTT+CGG | + | chr8.3:11726848-11726867 | None:intergenic | 55.0% |
| !! | TCGCGGTTGGTGGTTGAAGA+AGG | + | chr8.3:11726814-11726833 | None:intergenic | 55.0% |
| ACTGCGGTAAGTGTGGCCTC+TGG | + | chr8.3:11732699-11732718 | None:intergenic | 60.0% | |
| CCTCAAGCCAGAGGAGGCAA+GGG | - | chr8.3:11732572-11732591 | MS.gene58040:intron | 60.0% | |
| CTGAGAGTCGGAGCCACAAG+AGG | + | chr8.3:11731690-11731709 | None:intergenic | 60.0% | |
| GAGAGTCGGAGCCACAAGAG+GGG | + | chr8.3:11731688-11731707 | None:intergenic | 60.0% | |
| GCAGCTGCAAGTGCCTTCAC+AGG | + | chr8.3:11732279-11732298 | None:intergenic | 60.0% | |
| TCCTCAAGCCAGAGGAGGCA+AGG | - | chr8.3:11732571-11732590 | MS.gene58040:intron | 60.0% | |
| TGCTCGTGGTAACCACCGCA+AGG | - | chr8.3:11731360-11731379 | MS.gene58040:intron | 60.0% | |
| TTCAGCCGCCCATCTTCACC+TGG | + | chr8.3:11731886-11731905 | None:intergenic | 60.0% | |
| !! | CAAGAGGCACTGCCGAGCAA+GGG | + | chr8.3:11731920-11731939 | None:intergenic | 60.0% |
| !! | TCAAGAGGCACTGCCGAGCA+AGG | + | chr8.3:11731921-11731940 | None:intergenic | 60.0% |
| CCTTCCGCCGAAGTCGACGA+CGG | - | chr8.3:11726838-11726857 | MS.gene58040:CDS | 65.0% | |
| CTTCGGCGGAAGGAGAGTCG+CGG | + | chr8.3:11726831-11726850 | None:intergenic | 65.0% | |
| GCGGTCCAGGTGAAGATGGG+CGG | - | chr8.3:11731878-11731897 | MS.gene58040:intron | 65.0% | |
| GGAAGGAGAGTCGCGGTTGG+TGG | + | chr8.3:11726824-11726843 | None:intergenic | 65.0% | |
| ! | CCCTTGCCTCCTCTGGCTTG+AGG | + | chr8.3:11732575-11732594 | None:intergenic | 65.0% |
| ! | GGCGTGCAGCACTTGGCTTG+TGG | - | chr8.3:11731604-11731623 | MS.gene58040:intron | 65.0% |
| !! | AACGCCGTCGTCGACTTCGG+CGG | + | chr8.3:11726845-11726864 | None:intergenic | 65.0% |
| GGCGGAAGGAGAGTCGCGGT+TGG | + | chr8.3:11726827-11726846 | None:intergenic | 70.0% | |
| !! | CCGTCGTCGACTTCGGCGGA+AGG | + | chr8.3:11726841-11726860 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 11726781 | 11732827 | 11726781 | ID=MS.gene58040 |
| chr8.3 | mRNA | 11726781 | 11732827 | 11726781 | ID=MS.gene58040.t1;Parent=MS.gene58040 |
| chr8.3 | exon | 11732627 | 11732827 | 11732627 | ID=MS.gene58040.t1.exon1;Parent=MS.gene58040.t1 |
| chr8.3 | CDS | 11732627 | 11732827 | 11732627 | ID=cds.MS.gene58040.t1;Parent=MS.gene58040.t1 |
| chr8.3 | exon | 11731404 | 11731490 | 11731404 | ID=MS.gene58040.t1.exon2;Parent=MS.gene58040.t1 |
| chr8.3 | CDS | 11731404 | 11731490 | 11731404 | ID=cds.MS.gene58040.t1;Parent=MS.gene58040.t1 |
| chr8.3 | exon | 11730297 | 11730479 | 11730297 | ID=MS.gene58040.t1.exon3;Parent=MS.gene58040.t1 |
| chr8.3 | CDS | 11730297 | 11730479 | 11730297 | ID=cds.MS.gene58040.t1;Parent=MS.gene58040.t1 |
| chr8.3 | exon | 11730093 | 11730179 | 11730093 | ID=MS.gene58040.t1.exon4;Parent=MS.gene58040.t1 |
| chr8.3 | CDS | 11730093 | 11730179 | 11730093 | ID=cds.MS.gene58040.t1;Parent=MS.gene58040.t1 |
| chr8.3 | exon | 11729912 | 11729983 | 11729912 | ID=MS.gene58040.t1.exon5;Parent=MS.gene58040.t1 |
| chr8.3 | CDS | 11729912 | 11729983 | 11729912 | ID=cds.MS.gene58040.t1;Parent=MS.gene58040.t1 |
| chr8.3 | exon | 11726781 | 11728724 | 11726781 | ID=MS.gene58040.t1.exon6;Parent=MS.gene58040.t1 |
| chr8.3 | CDS | 11726781 | 11728724 | 11726781 | ID=cds.MS.gene58040.t1;Parent=MS.gene58040.t1 |
| Gene Sequence |
| Protein sequence |
