AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59552


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59552.t1 MTR_8g027725 97.366 949 25 0 1 949 1 949 0.0 1916
MS.gene59552.t1 MTR_8g027725 95.785 949 25 1 1 949 1 934 0.0 1878
MS.gene59552.t1 MTR_7g117355 66.159 919 273 5 34 949 81 964 0.0 1253
MS.gene59552.t1 MTR_3g091310 57.392 859 314 11 124 949 224 1063 0.0 1009
MS.gene59552.t1 MTR_3g091310 57.392 859 314 11 124 949 130 969 0.0 1008
MS.gene59552.t1 MTR_1g008230 49.528 1060 398 15 1 949 1 1034 0.0 1002
MS.gene59552.t1 MTR_1g008230 56.736 772 290 7 201 949 6 756 0.0 886
MS.gene59552.t1 MTR_7g021365 32.353 476 265 14 509 949 592 1045 2.08e-55 209
MS.gene59552.t1 MTR_0097s0020 68.293 82 26 0 505 586 1 82 1.91e-33 124
MS.gene59552.t1 MTR_2g047220 68.293 82 26 0 505 586 1 82 1.91e-33 124
MS.gene59552.t1 MTR_1g012890 47.183 142 68 3 813 949 229 368 3.40e-32 129
MS.gene59552.t1 MTR_1g012910 47.183 142 68 3 813 949 369 508 5.40e-32 132
MS.gene59552.t1 MTR_1g012910 47.183 142 68 3 813 949 532 671 1.12e-31 132
MS.gene59552.t1 MTR_2g036060 38.424 203 110 7 743 939 993 1186 1.15e-28 124
MS.gene59552.t1 MTR_2g036060 38.424 203 110 7 743 939 968 1161 1.34e-28 124
MS.gene59552.t1 MTR_2g047818 66.667 69 23 0 505 573 1 69 4.25e-25 99.8
MS.gene59552.t1 MTR_7g021365 32.821 195 119 4 509 692 592 785 2.92e-22 103
MS.gene59552.t1 MTR_1g008250 80.000 50 10 0 900 949 2 51 2.86e-21 88.2
MS.gene59552.t1 MTR_1g086980 37.705 122 74 2 808 929 483 602 2.11e-20 97.1
MS.gene59552.t1 MTR_1g086980 37.705 122 74 2 808 929 683 802 2.81e-20 97.1
MS.gene59552.t1 MTR_1g086980 37.705 122 74 2 808 929 632 751 2.82e-20 97.1
MS.gene59552.t1 MTR_1g086980 37.705 122 74 2 808 929 663 782 3.09e-20 97.1
MS.gene59552.t1 MTR_1g086980 37.705 122 74 2 808 929 673 792 3.18e-20 97.1
MS.gene59552.t1 MTR_1g086980 37.705 122 74 2 808 929 611 730 3.24e-20 97.1
MS.gene59552.t1 MTR_1g098370 37.086 151 91 3 799 948 90 237 1.05e-19 94.0
MS.gene59552.t1 MTR_1g098000 36.424 151 92 3 799 948 87 234 3.32e-19 92.4
MS.gene59552.t1 MTR_5g016870 33.088 136 84 3 808 943 715 843 4.02e-19 93.6
MS.gene59552.t1 MTR_0097s0010 60.345 58 23 0 505 562 1 58 4.85e-19 82.8
MS.gene59552.t1 MTR_0071s0100 23.298 382 251 13 574 948 2 348 2.72e-17 85.5
MS.gene59552.t1 MTR_3g073320 32.778 180 104 7 521 686 280 456 3.41e-17 87.8
MS.gene59552.t1 MTR_3g073320 30.208 192 104 9 514 686 1024 1204 2.72e-13 75.1
MS.gene59552.t1 MTR_3g073320 32.778 180 104 7 521 686 293 469 4.95e-17 87.0
MS.gene59552.t1 MTR_3g073320 30.208 192 104 9 514 686 1037 1217 3.10e-13 74.7
MS.gene59552.t1 MTR_7g109560 33.058 121 79 2 808 928 613 731 4.23e-15 80.5
MS.gene59552.t1 MTR_6g059310 35.385 130 79 3 818 946 123 248 6.80e-15 77.4
MS.gene59552.t1 MTR_6g059310 35.385 130 79 3 818 946 123 248 7.27e-15 77.8
MS.gene59552.t1 MTR_8g042510 28.977 176 110 6 521 686 130 300 7.69e-15 77.0
MS.gene59552.t1 MTR_7g055660 31.967 122 81 2 808 929 583 702 1.57e-14 78.6
MS.gene59552.t1 MTR_3g088625 32.484 157 91 4 799 948 1210 1358 2.62e-14 78.6
MS.gene59552.t1 MTR_3g088625 32.484 157 91 4 799 948 1316 1464 2.76e-14 78.2
MS.gene59552.t1 MTR_5g013420 31.667 180 80 6 806 948 915 1088 3.35e-13 74.3
MS.gene59552.t1 MTR_5g013420 33.333 156 66 5 806 929 915 1064 1.22e-12 72.8
MS.gene59552.t1 MTR_1g086980 38.636 88 53 1 808 895 673 759 1.36e-12 72.4
MS.gene59552.t1 MTR_6g043250 50.877 57 27 1 411 467 36 91 1.62e-12 64.7
MS.gene59552.t1 MTR_8g078490 31.056 161 92 4 801 945 1092 1249 1.14e-11 69.7
MS.gene59552.t1 MTR_4g010830 31.613 155 68 5 806 928 806 954 5.53e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59552.t1 AT3G61740 58.009 924 343 17 34 949 96 982 0.0 1084
MS.gene59552.t1 AT3G61740 55.683 959 346 16 34 949 96 1018 0.0 1064
MS.gene59552.t1 AT4G27910 49.432 1056 398 19 1 949 1 1027 0.0 966
MS.gene59552.t1 AT5G53430 53.555 872 349 10 113 949 193 1043 0.0 964
MS.gene59552.t1 AT2G31650 32.397 463 268 16 509 949 599 1038 2.56e-64 236
MS.gene59552.t1 AT1G05830 32.976 467 264 17 509 949 616 1059 3.03e-62 230
MS.gene59552.t1 AT1G05830 32.976 467 264 17 509 949 616 1059 3.03e-62 230
MS.gene59552.t1 AT1G05830 32.976 467 264 17 509 949 616 1059 3.03e-62 230
MS.gene59552.t1 AT1G05830 32.976 467 264 17 509 949 616 1059 3.03e-62 230
MS.gene59552.t1 AT5G42400 40.244 164 85 4 787 949 1237 1388 1.26e-29 128
MS.gene59552.t1 AT5G42400 40.244 164 85 4 787 949 1237 1388 1.26e-29 128
MS.gene59552.t1 AT5G42400 40.244 164 85 4 787 949 1237 1388 1.26e-29 128
MS.gene59552.t1 AT5G42400 40.244 164 85 4 787 949 1237 1388 1.26e-29 128
MS.gene59552.t1 AT5G42400 40.244 164 85 4 787 949 1237 1388 1.26e-29 128
MS.gene59552.t1 AT5G42400 40.244 164 85 4 787 949 1237 1388 1.26e-29 128
MS.gene59552.t1 AT5G42400 40.244 164 85 4 787 949 1237 1388 1.26e-29 128
MS.gene59552.t1 AT5G42400 40.244 164 85 4 787 949 1237 1388 1.26e-29 128
MS.gene59552.t1 AT5G28340 57.971 69 28 1 278 346 9 76 1.11e-19 93.6
MS.gene59552.t1 AT1G76710 37.086 151 91 3 799 948 81 228 4.93e-19 92.0
MS.gene59552.t1 AT1G76710 37.086 151 91 3 799 948 81 228 5.28e-19 92.0
MS.gene59552.t1 AT1G76710 37.086 151 91 3 799 948 81 228 5.39e-19 92.0
MS.gene59552.t1 AT1G76710 37.086 151 91 3 799 948 81 228 5.39e-19 92.0
MS.gene59552.t1 AT3G14740 31.792 173 106 6 521 686 153 320 9.31e-19 89.4
MS.gene59552.t1 AT3G14740 31.792 173 106 6 521 686 153 320 9.49e-19 89.4
MS.gene59552.t1 AT2G23380 35.417 144 85 5 808 949 526 663 2.82e-18 90.5
MS.gene59552.t1 AT4G02020 33.094 139 86 3 808 946 708 839 3.53e-18 90.5
MS.gene59552.t1 AT2G23380 35.417 144 85 5 808 949 753 890 4.29e-18 90.5
MS.gene59552.t1 AT1G02580 37.097 124 74 3 806 928 543 663 5.97e-18 89.4
MS.gene59552.t1 AT1G77800 33.533 167 94 6 533 686 293 455 1.44e-17 89.0
MS.gene59552.t1 AT1G77800 33.533 167 94 6 533 686 293 455 1.53e-17 89.0
MS.gene59552.t1 AT1G77800 33.533 167 94 6 533 686 293 455 1.55e-17 89.0
MS.gene59552.t1 AT1G77800 33.533 167 94 6 533 686 293 455 1.60e-17 88.6
MS.gene59552.t1 AT1G77800 33.533 167 94 6 533 686 293 455 1.76e-17 88.6
MS.gene59552.t1 AT4G30860 36.364 132 79 3 818 948 337 464 1.83e-17 87.0
MS.gene59552.t1 AT3G59960 36.154 130 78 3 818 946 122 247 1.24e-15 79.0
MS.gene59552.t1 AT3G59960 36.154 130 78 3 818 946 122 247 1.24e-15 79.0
MS.gene59552.t1 AT3G59960 36.154 130 78 3 818 946 122 247 1.24e-15 79.0
MS.gene59552.t1 AT2G44150 35.385 130 79 3 818 946 127 252 1.41e-15 80.1
MS.gene59552.t1 AT3G59960 36.154 130 78 3 818 946 122 247 1.72e-15 79.3
MS.gene59552.t1 AT2G23740 34.899 149 79 4 818 949 1228 1375 1.24e-13 76.3
MS.gene59552.t1 AT2G23740 34.899 149 79 4 818 949 1235 1382 1.26e-13 76.3
MS.gene59552.t1 AT2G23740 34.899 149 79 4 818 949 1235 1382 1.26e-13 76.3
MS.gene59552.t1 AT2G23740 34.899 149 79 4 818 949 1235 1382 1.26e-13 76.3
MS.gene59552.t1 AT1G77300 30.573 157 94 4 799 948 1018 1166 3.51e-13 74.7
MS.gene59552.t1 AT1G77300 30.573 157 94 4 799 948 1018 1166 3.63e-13 74.7
MS.gene59552.t1 AT2G35160 34.109 129 73 3 807 929 611 733 1.19e-12 72.4
MS.gene59552.t1 AT1G77800 34.400 125 69 4 533 646 293 415 1.21e-12 72.8
MS.gene59552.t1 AT1G77800 34.400 125 69 4 533 646 293 415 1.21e-12 72.8
MS.gene59552.t1 AT2G35160 34.109 129 73 3 807 929 647 769 1.40e-12 72.4
MS.gene59552.t1 AT2G35160 34.109 129 73 3 807 929 647 769 1.40e-12 72.4
MS.gene59552.t1 AT2G35160 34.109 129 73 3 807 929 647 769 1.40e-12 72.4
MS.gene59552.t1 AT2G35160 34.109 129 73 3 807 929 647 769 1.40e-12 72.4
MS.gene59552.t1 AT4G02020 36.667 90 56 1 808 897 708 796 1.58e-12 72.0
MS.gene59552.t1 AT3G61723 70.270 37 11 0 337 373 3 39 6.13e-12 62.4

Find 242 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATCTTTGTTCAGATTTC+AGG 0.100271 8.4:-68539195 MS.gene59552:intron
AACAGTGAAGTTACAAATTA+TGG 0.207840 8.4:-68539874 MS.gene59552:CDS
CAGGGAACTTTCAGTTCTTC+TGG 0.223998 8.4:+68530641 None:intergenic
TCTCAGGTACCACAACATTT+TGG 0.240581 8.4:+68536674 None:intergenic
ATTCTTGGTGGACTGCTATT+TGG 0.247644 8.4:+68535630 None:intergenic
GAAATTGAAACGTTGTAAAT+TGG 0.263415 8.4:-68540010 MS.gene59552:CDS
GGACCCAGTCTTCATTCTTT+AGG 0.269616 8.4:-68531984 MS.gene59552:CDS
TTACTTTGGGTGATATTGTT+TGG 0.271509 8.4:-68539630 MS.gene59552:CDS
AATTTACAACGTTTCAATTT+CGG 0.282990 8.4:+68540012 None:intergenic
TAGAATTTGCTTCGGAAAAT+CGG 0.285797 8.4:-68531622 MS.gene59552:CDS
TGTTGCCTTTGTCCAGTAAA+AGG 0.291897 8.4:-68535530 MS.gene59552:intron
GCTTTGCACCATAGCATTCT+TGG 0.291938 8.4:+68535615 None:intergenic
GAGACCTGTTGAAGTTTATC+AGG 0.294726 8.4:+68539044 None:intergenic
TGAATCCTTAACCTTCTTCA+TGG 0.300831 8.4:+68537399 None:intergenic
TTCAGTTCTTCTGGCTCGTC+TGG 0.309159 8.4:+68530650 None:intergenic
GACTTGTATGTCAGTGATTC+CGG 0.309548 8.4:+68536818 None:intergenic
TTTATTCTTTCCTTGCAATC+TGG 0.316720 8.4:+68536851 None:intergenic
ACCATTCAGATGGTGGGAAT+TGG 0.319526 8.4:-68537195 MS.gene59552:CDS
TACTTTGGGTGATATTGTTT+GGG 0.325251 8.4:-68539629 MS.gene59552:CDS
CGACATCTCGCAGTAGAAAA+TGG 0.340301 8.4:+68534045 None:intergenic
GAAGAACATGAAGGTTGTTC+AGG 0.345458 8.4:-68539967 MS.gene59552:CDS
ATGAGCCAGTTCATGCAAAA+TGG 0.353592 8.4:-68535843 MS.gene59552:CDS
CGGCTTACAAATGAAGCTTT+GGG 0.361561 8.4:+68536566 None:intergenic
GGGAGTAATGGTTCTGGTTC+CGG 0.363567 8.4:-68539730 MS.gene59552:CDS
AAGAATAAATTGTAAATTAC+CGG 0.364799 8.4:-68536837 MS.gene59552:CDS
CTGTAGAAAATTTATGAACT+AGG 0.364864 8.4:-68530600 None:intergenic
AACTCAATTGAACAACTATA+AGG 0.365573 8.4:-68531955 MS.gene59552:intron
TGAACACTTACCTTGCAAAA+AGG 0.367242 8.4:+68536004 None:intergenic
ATTTGTAACTTCACTGTTCA+AGG 0.368020 8.4:+68539879 None:intergenic
TAATATACTGCGCAGTTCAT+AGG 0.368500 8.4:-68534315 MS.gene59552:intron
ACGGCTTACAAATGAAGCTT+TGG 0.368772 8.4:+68536565 None:intergenic
TCTCAGGTACCACACCGTTT+TGG 0.371155 8.4:+68536629 None:intergenic
GTTGGCAGAAGATGGTATTC+TGG 0.372034 8.4:-68539111 MS.gene59552:CDS
GAAATGCGGGAAGAGGTTTC+CGG 0.374872 8.4:-68539605 MS.gene59552:CDS
GAAGGAGGAAAGATGTTTAT+AGG 0.376220 8.4:-68539663 MS.gene59552:CDS
GGCGCAGATGAAAAGAATAA+TGG 0.377208 8.4:-68539694 MS.gene59552:CDS
TGAAGTATTCACTTCTTTCA+AGG 0.377921 8.4:-68531798 MS.gene59552:CDS
GTACCTAAGGTCTTCTAATA+AGG 0.380355 8.4:-68534019 MS.gene59552:intron
TGAAGACGATGGTAAGGTTA+TGG 0.393060 8.4:-68539761 MS.gene59552:CDS
AAATCACAAGGGATGCTTCC+GGG 0.397857 8.4:-68534139 MS.gene59552:CDS
AAAATCCTTGCATAGCAGTT+TGG 0.398088 8.4:+68530880 None:intergenic
GATTTCTACCGAACATTTCA+AGG 0.398977 8.4:-68537018 MS.gene59552:intron
CCATTCAGATGGTGGGAATT+GGG 0.399492 8.4:-68537194 MS.gene59552:intron
AGATGGAGTTTCCCAGGACT+TGG 0.402444 8.4:-68536045 MS.gene59552:CDS
GTTGTGATGGTTGCAATGTA+TGG 0.402866 8.4:-68537061 MS.gene59552:CDS
TGTGAAACCAGTACAGAATC+TGG 0.407311 8.4:+68534201 None:intergenic
GAGGAAAGATGTTTATAGGC+TGG 0.411099 8.4:-68539659 MS.gene59552:CDS
AGAGCAAACCGAGTGACTTT+CGG 0.411255 8.4:-68539154 MS.gene59552:CDS
AGGCTGGAGGAATTTACTTT+GGG 0.411864 8.4:-68539643 MS.gene59552:CDS
AAAATCACAAGGGATGCTTC+CGG 0.413938 8.4:-68534140 MS.gene59552:CDS
CTGGTTTCACATTCATCCCT+GGG 0.417723 8.4:-68534189 MS.gene59552:CDS
AAGAGGTTTCCGGCTTGGCC+TGG 0.418107 8.4:-68539595 MS.gene59552:CDS
GAAAATCTTAGAATTTGCTT+CGG 0.419047 8.4:-68531630 MS.gene59552:CDS
CAACACTCTCTTTCAACATC+GGG 0.421241 8.4:+68535548 None:intergenic
ACTGGTTTCACATTCATCCC+TGG 0.421878 8.4:-68534190 MS.gene59552:CDS
TAGGCTGGAGGAATTTACTT+TGG 0.423085 8.4:-68539644 MS.gene59552:CDS
CAAAACCATGAAGAAGGTTA+AGG 0.423490 8.4:-68537404 MS.gene59552:CDS
AGGGCAGGTTCCATGACCTC+AGG 0.423956 8.4:+68535312 None:intergenic
AGAATTTGCTTCGGAAAATC+GGG 0.428060 8.4:-68531621 MS.gene59552:CDS
TTATCTTTGTTCAGATTTCA+GGG 0.428755 8.4:-68539194 MS.gene59552:intron
ATGCTTCCGGGGATCAAGGC+TGG 0.430293 8.4:-68534127 MS.gene59552:CDS
CCATCCTGATAAACTTCAAC+AGG 0.433456 8.4:-68539048 MS.gene59552:CDS
TGTCATCGACTGTTGTGTTC+CGG 0.436160 8.4:-68539536 MS.gene59552:CDS
GGATTATGCTTGGGTGAAGC+AGG 0.437142 8.4:-68539361 MS.gene59552:CDS
CCATCGTCTTCAAAGCTTGA+CGG 0.441880 8.4:+68539772 None:intergenic
CCTGCTGCTGATCCAAGTCC+TGG 0.444147 8.4:+68536033 None:intergenic
AAAGATGTGCTATTTGTAGA+TGG 0.444969 8.4:-68535813 MS.gene59552:CDS
AGATCTACAAGAAGGAGATA+TGG 0.445312 8.4:-68531568 MS.gene59552:intron
CACACCACCATTAACTTCTC+AGG 0.449713 8.4:+68536613 None:intergenic
TTCGGAAAATCGGGTATTCA+TGG 0.452584 8.4:-68531612 MS.gene59552:CDS
CCTTCGCAGAATTCATGAAC+AGG 0.453057 8.4:-68539326 MS.gene59552:intron
TGCATTCCATGGTGAAGAAT+GGG 0.455058 8.4:-68534357 MS.gene59552:CDS
TTGCATTCCATGGTGAAGAA+TGG 0.456207 8.4:-68534358 MS.gene59552:CDS
ATTGAATTCATCGCGTAAAA+CGG 0.459710 8.4:-68539833 MS.gene59552:CDS
CAGAAGAAGCGTAAAGTGAA+TGG 0.462867 8.4:-68539940 MS.gene59552:CDS
AACATCACACAAAGTGTATC+CGG 0.463067 8.4:+68539517 None:intergenic
TGTGGTACCTGAGAAGTTAA+TGG 0.467633 8.4:-68536620 MS.gene59552:CDS
GGCGTTGGAGGAGGCAAAGT+TGG 0.467935 8.4:-68539129 MS.gene59552:CDS
ACAAAATTATCATCTGCAAC+AGG 0.469527 8.4:-68535771 MS.gene59552:intron
TGGTTCCGGTCTTAGTTTCG+AGG 0.470951 8.4:-68539716 MS.gene59552:CDS
TTCAGAAGATGGAGTTTCCC+AGG 0.472408 8.4:-68536051 MS.gene59552:CDS
AAGACCGGGAGTAATGGTTC+TGG 0.476354 8.4:-68539736 MS.gene59552:CDS
TCACCTTATTAGAAGACCTT+AGG 0.476989 8.4:+68534016 None:intergenic
GTTTGGGTAATCAAGGGAAC+CGG 0.479104 8.4:-68530855 MS.gene59552:CDS
TGAAAAGAATAATGGGAATG+TGG 0.479324 8.4:-68539686 MS.gene59552:CDS
GCGGGAAGAGGTTTCCGGCT+TGG 0.479870 8.4:-68539600 MS.gene59552:CDS
CGAGATGTCGTGTGTACCTA+AGG 0.485002 8.4:-68534032 MS.gene59552:CDS
ACCACAGCTAGCACAACATC+TGG 0.486192 8.4:+68537441 None:intergenic
CCAGGACTTGGATCAGCAGC+AGG 0.490183 8.4:-68536033 MS.gene59552:CDS
GTTGGGAGCTCTGCAAAGGC+AGG 0.490186 8.4:+68530622 None:intergenic
AGTATCGAGGTGAGCAGGTA+AGG 0.493486 8.4:-68531450 MS.gene59552:CDS
TCCTCCTACTTCCTTTGTGA+AGG 0.493625 8.4:-68535274 MS.gene59552:intron
GCGCAGATGAAAAGAATAAT+GGG 0.495452 8.4:-68539693 MS.gene59552:CDS
AGGGATGCTTCCGGGGATCA+AGG 0.495932 8.4:-68534131 MS.gene59552:CDS
AGAATATTACTGCCAGGATA+AGG 0.496995 8.4:-68539003 MS.gene59552:intron
TTCACCTAAAGAATGAAGAC+TGG 0.497731 8.4:+68531980 None:intergenic
TCCACTGATCTGTACTTCTC+AGG 0.498502 8.4:+68536658 None:intergenic
GCGAAAACCAATGTTTCTGC+TGG 0.498699 8.4:-68530820 MS.gene59552:CDS
GGAAGCGGACACCTAGTCAA+TGG 0.500569 8.4:-68536249 MS.gene59552:CDS
CCCAATTCCCACCATCTGAA+TGG 0.500807 8.4:+68537194 None:intergenic
TTTCTCGTGTGGTGGTCCTC+AGG 0.501726 8.4:-68539800 MS.gene59552:CDS
CTGTTGAAGTTTATCAGGAT+GGG 0.501868 8.4:+68539049 None:intergenic
AGTGCGGTTCTTGTGATTCA+AGG 0.503256 8.4:-68536270 MS.gene59552:CDS
GTGTGTCTTTCCCATTGACT+AGG 0.503391 8.4:+68536238 None:intergenic
ATATTGTTTGGGCGAAATGC+GGG 0.503789 8.4:-68539618 MS.gene59552:CDS
AAACTTACAGTTGCATTCCA+TGG 0.504246 8.4:-68534368 MS.gene59552:intron
GAAAAGAATAATGGGAATGT+GGG 0.505375 8.4:-68539685 MS.gene59552:CDS
TTGAATCAGGTATGTTGTGA+TGG 0.505695 8.4:-68537074 MS.gene59552:intron
CTTTCGGAAGGCGTTGGAGG+AGG 0.506561 8.4:-68539138 MS.gene59552:CDS
TGACTTTCGGAAGGCGTTGG+AGG 0.506677 8.4:-68539141 MS.gene59552:CDS
GTAATGTGCGCATCAAGAGC+TGG 0.508214 8.4:-68534612 MS.gene59552:CDS
ACAGAGCACATTTCAGAAGA+TGG 0.509287 8.4:-68536062 MS.gene59552:CDS
TTTGGGCGAAATGCGGGAAG+AGG 0.509911 8.4:-68539612 MS.gene59552:CDS
TTGCACCATAGCATTCTTGG+TGG 0.510554 8.4:+68535618 None:intergenic
CCCAAGTCCAGATTCTGTAC+TGG 0.512817 8.4:-68534208 MS.gene59552:CDS
GGCAATTATTCATTTGCTGA+GGG 0.520845 8.4:-68532006 MS.gene59552:CDS
ATGAGACCAGCCTTGATCCC+CGG 0.521645 8.4:+68534121 None:intergenic
GAAGCGGACACCTAGTCAAT+GGG 0.522934 8.4:-68536248 MS.gene59552:CDS
GGTAAGGTTATGGTGAAGAC+CGG 0.524855 8.4:-68539751 MS.gene59552:CDS
TTCTGGGAGCAAATATCCCC+AGG 0.525878 8.4:+68534172 None:intergenic
CCTGTTGAAGTTTATCAGGA+TGG 0.526051 8.4:+68539048 None:intergenic
AGAAGAAGCGTAAAGTGAAT+GGG 0.526974 8.4:-68539939 MS.gene59552:CDS
GCGTAGTGTCGCTGATCTGA+GGG 0.527297 8.4:-68531428 MS.gene59552:CDS
TGTTGAGTATCGAGGTGAGC+AGG 0.535058 8.4:-68531455 MS.gene59552:CDS
AACGCCTTCCGAAAGTCACT+CGG 0.535744 8.4:+68539146 None:intergenic
ACCAGTACAGAATCTGGACT+TGG 0.536071 8.4:+68534207 None:intergenic
ACACAACACCTTGAAATGTT+CGG 0.537628 8.4:+68537010 None:intergenic
GAGGCAAAGTTGGCAGAAGA+TGG 0.538729 8.4:-68539119 MS.gene59552:CDS
CACAACATCTCGACATCAGT+TGG 0.539933 8.4:+68535384 None:intergenic
GGTTCCGGTCTTAGTTTCGA+GGG 0.540386 8.4:-68539715 MS.gene59552:CDS
GAATGGGTTTAATTCTGAAG+TGG 0.540515 8.4:-68539923 MS.gene59552:CDS
TTCTTGACCAGCAGAAACAT+TGG 0.541331 8.4:+68530813 None:intergenic
AAGAACATGAAGGTTGTTCA+GGG 0.541469 8.4:-68539966 MS.gene59552:CDS
GAATGGACAGGATTATGCTT+GGG 0.545462 8.4:-68539370 MS.gene59552:intron
AAACATGAAACTTACTTCCA+TGG 0.547468 8.4:+68534584 None:intergenic
GAAAATCGGGTATTCATGGA+TGG 0.547979 8.4:-68531608 MS.gene59552:CDS
AAGAATATAGAGCTCAATGA+AGG 0.548000 8.4:-68534096 MS.gene59552:CDS
ATTCTAAGAATTCCGAGGGC+AGG 0.549882 8.4:+68535297 None:intergenic
ATCACCACACCAGGCCAAGC+CGG 0.552724 8.4:+68539586 None:intergenic
GGCGTAGTGTCGCTGATCTG+AGG 0.553284 8.4:-68531429 MS.gene59552:CDS
AAAATCGGGTATTCATGGAT+GGG 0.553512 8.4:-68531607 MS.gene59552:CDS
GTTACAAATTATGGTGGTGT+TGG 0.554532 8.4:-68539865 MS.gene59552:CDS
AATCACAAGGGATGCTTCCG+GGG 0.555174 8.4:-68534138 MS.gene59552:CDS
AAGATTTGGCACCATTCAGA+TGG 0.556646 8.4:-68537205 MS.gene59552:CDS
AATGGTGGTGTGCAATGGAA+TGG 0.558105 8.4:-68536602 MS.gene59552:CDS
GTTCTTGTGATTCAAGGAAG+CGG 0.558321 8.4:-68536264 MS.gene59552:CDS
CTACTATTGTCCAGATTGCA+AGG 0.558628 8.4:-68536861 MS.gene59552:CDS
TTGTGATGGTTGCAATGTAT+GGG 0.559716 8.4:-68537060 MS.gene59552:CDS
GCCATGCAAAACCATGAAGA+AGG 0.560202 8.4:-68537410 MS.gene59552:CDS
AAGCTTTGAAGACGATGGTA+AGG 0.560217 8.4:-68539767 MS.gene59552:CDS
TGGCAATTATTCATTTGCTG+AGG 0.560890 8.4:-68532007 MS.gene59552:CDS
GAGTGACTTTCGGAAGGCGT+TGG 0.561864 8.4:-68539144 MS.gene59552:CDS
GTAATTTGTAAACAAAGCCA+TGG 0.561944 8.4:-68534675 MS.gene59552:CDS
ATGGTGAAGACCGGGAGTAA+TGG 0.563395 8.4:-68539742 MS.gene59552:CDS
GAGGTCATGGAACCTGCCCT+CGG 0.563450 8.4:-68535309 MS.gene59552:CDS
TGTTCTTCGTCTTCACAATG+AGG 0.563771 8.4:+68539982 None:intergenic
GGACCGTCTTCACCATCTGC+AGG 0.565146 8.4:-68531777 MS.gene59552:intron
GATATTGTTTGGGCGAAATG+CGG 0.565798 8.4:-68539619 MS.gene59552:CDS
CAACTGATGTCGAGATGTTG+TGG 0.565944 8.4:-68535383 MS.gene59552:CDS
ATAATGGGAATGTGGGAAGG+AGG 0.566298 8.4:-68539678 MS.gene59552:CDS
TGATCGAGAATATTACTGCC+AGG 0.566597 8.4:-68539009 MS.gene59552:CDS
CAATGTTTGCATAGAAATTG+TGG 0.567408 8.4:+68537367 None:intergenic
TACAGTTGGGAGCTCTGCAA+AGG 0.568876 8.4:+68530618 None:intergenic
CAACAGTCGATGACAGATTG+AGG 0.570719 8.4:+68539544 None:intergenic
TGTAGTCCCATTCTTCACCA+TGG 0.570955 8.4:+68534351 None:intergenic
TAGATGGATCGAAGACTATG+AGG 0.571471 8.4:-68535797 MS.gene59552:CDS
AAGTTAATGGTGGTGTGCAA+TGG 0.572576 8.4:-68536607 MS.gene59552:CDS
ATTTGGCACCATTCAGATGG+TGG 0.573230 8.4:-68537202 MS.gene59552:CDS
CTGTTCATGAATTCTGCGAA+GGG 0.574205 8.4:+68539327 None:intergenic
TGAATGGACAGGATTATGCT+TGG 0.574373 8.4:-68539371 MS.gene59552:intron
TAATGTGCGCATCAAGAGCT+GGG 0.575324 8.4:-68534611 MS.gene59552:CDS
GAAGCAAAATATCGTTCAGA+AGG 0.576064 8.4:-68531406 MS.gene59552:CDS
TTCAGAATTATGTGCAAGTG+CGG 0.577589 8.4:-68536286 MS.gene59552:intron
CTGCTGCTGATCCAAGTCCT+GGG 0.578027 8.4:+68536034 None:intergenic
GATTGAGGAGCCTCTGAGAG+AGG 0.578453 8.4:+68539559 None:intergenic
CGAAAATCAAAACAATATTG+TGG 0.579418 8.4:-68537238 MS.gene59552:CDS
TCTATGCAAACATTGTGTCA+AGG 0.583134 8.4:-68537359 MS.gene59552:intron
TGCTTGGGTGAAGCAGGGAA+TGG 0.584229 8.4:-68539355 MS.gene59552:CDS
TTTGGCACCATTCAGATGGT+GGG 0.584432 8.4:-68537201 MS.gene59552:CDS
GCAACACTCTCTTTCAACAT+CGG 0.585397 8.4:+68535547 None:intergenic
CCTGTTCATGAATTCTGCGA+AGG 0.587486 8.4:+68539326 None:intergenic
AACTGATGTCGAGATGTTGT+GGG 0.587971 8.4:-68535382 MS.gene59552:CDS
TGTCATCGATGCAACACACA+AGG 0.589933 8.4:-68531124 MS.gene59552:CDS
GGGCAGGTTCCATGACCTCA+GGG 0.590080 8.4:+68535313 None:intergenic
CTATGGTGCAAAGCATGTGC+AGG 0.590091 8.4:-68535606 MS.gene59552:CDS
TCAGTGGAGAATAGCCAAAA+CGG 0.591088 8.4:-68536643 MS.gene59552:CDS
GCCAGATGTTGTGCTAGCTG+TGG 0.593894 8.4:-68537442 MS.gene59552:CDS
CTCACCTTCACAAAGGAAGT+AGG 0.599839 8.4:+68535270 None:intergenic
GCAGTCCACCAAGAATGCTA+TGG 0.605138 8.4:-68535623 MS.gene59552:CDS
GGGTTCATGTAACATGCGCT+TGG 0.606201 8.4:-68535362 MS.gene59552:CDS
AACTTTGATTGAAAATCACA+AGG 0.606658 8.4:-68534151 MS.gene59552:CDS
GAAAGATGTTTATAGGCTGG+AGG 0.608096 8.4:-68539656 MS.gene59552:CDS
GCTCGAAGAGATCTACAAGA+AGG 0.609921 8.4:-68531576 MS.gene59552:CDS
TATCTTTGTTCAGATTTCAG+GGG 0.611660 8.4:-68539193 MS.gene59552:intron
GCATGCCAAACTGCTATGCA+AGG 0.612793 8.4:-68530885 MS.gene59552:CDS
AGAATAATGGGAATGTGGGA+AGG 0.613504 8.4:-68539681 MS.gene59552:CDS
GGAACCAGAACCATTACTCC+CGG 0.615764 8.4:+68539732 None:intergenic
GTGGTGTGCAATGGAATGGA+AGG 0.617649 8.4:-68536598 MS.gene59552:CDS
ATATATGTAATACCTGCAGA+TGG 0.617912 8.4:+68531765 None:intergenic
TGCGCCCTCGAAACTAAGAC+CGG 0.618453 8.4:+68539711 None:intergenic
AGGAATTCTAAGAATTCCGA+GGG 0.620696 8.4:+68535293 None:intergenic
GATTATGCTTGGGTGAAGCA+GGG 0.621450 8.4:-68539360 MS.gene59552:CDS
ATATTGCCAGAGAGCTGATG+TGG 0.622303 8.4:-68532027 MS.gene59552:intron
AAAGTACGTTTCTCGTGTGG+TGG 0.623550 8.4:-68539808 MS.gene59552:CDS
AACACTCTCTTTCAACATCG+GGG 0.625295 8.4:+68535549 None:intergenic
ACCTTCACAAAGGAAGTAGG+AGG 0.625317 8.4:+68535273 None:intergenic
AAATCGGGTATTCATGGATG+GGG 0.626035 8.4:-68531606 MS.gene59552:CDS
GGAGAGTAGCCAAAATGTTG+TGG 0.630843 8.4:-68536683 MS.gene59552:CDS
TTGGGAGCTCTGCAAAGGCA+GGG 0.630942 8.4:+68530623 None:intergenic
AAGCTTGACGGAAGCACCTG+AGG 0.631434 8.4:+68539784 None:intergenic
GCAATTATTCATTTGCTGAG+GGG 0.633254 8.4:-68532005 MS.gene59552:CDS
TCACCTAAAGAATGAAGACT+GGG 0.633891 8.4:+68531981 None:intergenic
GTTTCCGGCTTGGCCTGGTG+TGG 0.635849 8.4:-68539590 MS.gene59552:CDS
AGAGGATCAATCACCACACC+AGG 0.636574 8.4:+68539577 None:intergenic
CCACAGGTTGTTGAGTATCG+AGG 0.636601 8.4:-68531463 MS.gene59552:intron
GTAAGGTTATGGTGAAGACC+GGG 0.636733 8.4:-68539750 MS.gene59552:CDS
CCGTCAAGCTTTGAAGACGA+TGG 0.636843 8.4:-68539772 MS.gene59552:CDS
ACACTCTCTTTCAACATCGG+GGG 0.637503 8.4:+68535550 None:intergenic
TGTGAAGACGAAGAACATGA+AGG 0.640852 8.4:-68539976 MS.gene59552:CDS
GTGAAAGTACGTTTCTCGTG+TGG 0.641655 8.4:-68539811 MS.gene59552:CDS
ACCTGAGAAGTACAGATCAG+TGG 0.642316 8.4:-68536659 MS.gene59552:CDS
CCAGTACAGAATCTGGACTT+GGG 0.646165 8.4:+68534208 None:intergenic
GAGGAATTCTAAGAATTCCG+AGG 0.654328 8.4:+68535292 None:intergenic
ATACCTGCAGATGGTGAAGA+CGG 0.654905 8.4:+68531774 None:intergenic
GGTGATTGATCCTCTCTCAG+AGG 0.657617 8.4:-68539569 MS.gene59552:CDS
AACAACTTGTACAAGAACCA+TGG 0.658445 8.4:+68534658 None:intergenic
AGTGAAGTTACAAATTATGG+TGG 0.661008 8.4:-68539871 MS.gene59552:CDS
GGAATCACAGTTGAGAGCGG+AGG 0.661946 8.4:-68539090 MS.gene59552:CDS
ATCAAGAGCTGGGTATACCA+TGG 0.669635 8.4:-68534601 MS.gene59552:CDS
ACTTTGATTGAAAATCACAA+GGG 0.676869 8.4:-68534150 MS.gene59552:CDS
TCTGGAATCACAGTTGAGAG+CGG 0.678051 8.4:-68539093 MS.gene59552:CDS
GTTGTTCAAGATCAGCGAGG+AGG 0.682159 8.4:-68531148 MS.gene59552:CDS
AGTCAATGGGAAAGACACAC+AGG 0.682407 8.4:-68536235 MS.gene59552:CDS
CCGTCATCTCACCTTCACAA+AGG 0.686588 8.4:+68535263 None:intergenic
CAAACCGAGTGACTTTCGGA+AGG 0.693452 8.4:-68539150 MS.gene59552:CDS
GGAGAATAGCCAAAACGGTG+TGG 0.693880 8.4:-68536638 MS.gene59552:CDS
TGTTCATGAATTCTGCGAAG+GGG 0.695344 8.4:+68539328 None:intergenic
GTCATCGATGCAACACACAA+GGG 0.700292 8.4:-68531123 MS.gene59552:CDS
TGGTTTCACATTCATCCCTG+GGG 0.704687 8.4:-68534188 MS.gene59552:CDS
TCTGGGAGCAAATATCCCCA+GGG 0.714516 8.4:+68534173 None:intergenic
GGTACCTGAGAAGTTAATGG+TGG 0.731665 8.4:-68536617 MS.gene59552:CDS
GCAGTTGTTCAAGATCAGCG+AGG 0.756185 8.4:-68531151 MS.gene59552:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr8.4 gene 68530601 68540067 68530601 ID=MS.gene59552
chr8.4 mRNA 68530601 68540067 68530601 ID=MS.gene59552.t1;Parent=MS.gene59552
chr8.4 exon 68539489 68540067 68539489 ID=MS.gene59552.t1.exon1;Parent=MS.gene59552.t1
chr8.4 CDS 68539489 68540067 68539489 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68539327 68539382 68539327 ID=MS.gene59552.t1.exon2;Parent=MS.gene59552.t1
chr8.4 CDS 68539327 68539382 68539327 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68539004 68539202 68539004 ID=MS.gene59552.t1.exon3;Parent=MS.gene59552.t1
chr8.4 CDS 68539004 68539202 68539004 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68537360 68537467 68537360 ID=MS.gene59552.t1.exon4;Parent=MS.gene59552.t1
chr8.4 CDS 68537360 68537467 68537360 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68537195 68537263 68537195 ID=MS.gene59552.t1.exon5;Parent=MS.gene59552.t1
chr8.4 CDS 68537195 68537263 68537195 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68537019 68537087 68537019 ID=MS.gene59552.t1.exon6;Parent=MS.gene59552.t1
chr8.4 CDS 68537019 68537087 68537019 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68536809 68536900 68536809 ID=MS.gene59552.t1.exon7;Parent=MS.gene59552.t1
chr8.4 CDS 68536809 68536900 68536809 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68536574 68536711 68536574 ID=MS.gene59552.t1.exon8;Parent=MS.gene59552.t1
chr8.4 CDS 68536574 68536711 68536574 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68536168 68536303 68536168 ID=MS.gene59552.t1.exon9;Parent=MS.gene59552.t1
chr8.4 CDS 68536168 68536303 68536168 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68536015 68536087 68536015 ID=MS.gene59552.t1.exon10;Parent=MS.gene59552.t1
chr8.4 CDS 68536015 68536087 68536015 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68535772 68535871 68535772 ID=MS.gene59552.t1.exon11;Parent=MS.gene59552.t1
chr8.4 CDS 68535772 68535871 68535772 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68535531 68535655 68535531 ID=MS.gene59552.t1.exon12;Parent=MS.gene59552.t1
chr8.4 CDS 68535531 68535655 68535531 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68535275 68535420 68535275 ID=MS.gene59552.t1.exon13;Parent=MS.gene59552.t1
chr8.4 CDS 68535275 68535420 68535275 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68534599 68534703 68534599 ID=MS.gene59552.t1.exon14;Parent=MS.gene59552.t1
chr8.4 CDS 68534599 68534703 68534599 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68534316 68534380 68534316 ID=MS.gene59552.t1.exon15;Parent=MS.gene59552.t1
chr8.4 CDS 68534316 68534380 68534316 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68534020 68534233 68534020 ID=MS.gene59552.t1.exon16;Parent=MS.gene59552.t1
chr8.4 CDS 68534020 68534233 68534020 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68531956 68532039 68531956 ID=MS.gene59552.t1.exon17;Parent=MS.gene59552.t1
chr8.4 CDS 68531956 68532039 68531956 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68531778 68531825 68531778 ID=MS.gene59552.t1.exon18;Parent=MS.gene59552.t1
chr8.4 CDS 68531778 68531825 68531778 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68531569 68531658 68531569 ID=MS.gene59552.t1.exon19;Parent=MS.gene59552.t1
chr8.4 CDS 68531569 68531658 68531569 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68531393 68531479 68531393 ID=MS.gene59552.t1.exon20;Parent=MS.gene59552.t1
chr8.4 CDS 68531393 68531479 68531393 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68531095 68531169 68531095 ID=MS.gene59552.t1.exon21;Parent=MS.gene59552.t1
chr8.4 CDS 68531095 68531169 68531095 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68530808 68530908 68530808 ID=MS.gene59552.t1.exon22;Parent=MS.gene59552.t1
chr8.4 CDS 68530808 68530908 68530808 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
chr8.4 exon 68530601 68530691 68530601 ID=MS.gene59552.t1.exon23;Parent=MS.gene59552.t1
chr8.4 CDS 68530601 68530691 68530601 ID=cds.MS.gene59552.t1;Parent=MS.gene59552.t1
Gene Sequence

>MS.gene59552

ATGGTGATTAAACGTAGTGTTAAAGTTGAAATGCCGAAATTGAAACGTTGTAAATTGGATGAGCCTCATTGTGAAGACGAAGAACATGAAGGTTGTTCAGGGAGTCAGAAGAAGCGTAAAGTGAATGGGTTTAATTCTGAAGTGGATTTTGACACTGGTTCTGCTTCCTTGAACAGTGAAGTTACAAATTATGGTGGTGTTGGCGAAGTTGAATTGAATTCATCGCGTAAAACGGTGAAAGTACGTTTCTCGTGTGGTGGTCCTCAGGTGCTTCCGTCAAGCTTTGAAGACGATGGTAAGGTTATGGTGAAGACCGGGAGTAATGGTTCTGGTTCCGGTCTTAGTTTCGAGGGCGCAGATGAAAAGAATAATGGGAATGTGGGAAGGAGGAAAGATGTTTATAGGCTGGAGGAATTTACTTTGGGTGATATTGTTTGGGCGAAATGCGGGAAGAGGTTTCCGGCTTGGCCTGGTGTGGTGATTGATCCTCTCTCAGAGGCTCCTCAATCTGTCATCGACTGTTGTGTTCCGGATACACTTTGTGTGATGTTTTTCGGTTATTCGAAAAATGGAACAAGGGTAATTGTTTTTATAAAAGTCTTGCTTATTTATTATTGTATTGTAAATTTGAGTTTTTGATTTTGCGTTTTTGGTGTTGAACTCTAAAAGAATTATGAATGGACAGGATTATGCTTGGGTGAAGCAGGGAATGGTATTCCCCTTCGCAGAATTCATGAACAGGTGTGTGTGGTTAGATGGTACTTGCTACAGTTGTTTCTGTTGGATTATTGGAGATTTAATCAGCAAGTTTTTTTTTTTTTTTTTAATTTTTTTTTAAGTTTTTAATTTTTTTATCTTTGTTCAGATTTCAGGGGCAGACACAATTGTTCAAGAGCAAACCGAGTGACTTTCGGAAGGCGTTGGAGGAGGCAAAGTTGGCAGAAGATGGTATTCTGGAATCACAGTTGAGAGCGGAGGAAATGACTGACTTAGAAGCCCATCCTGATAAACTTCAACAGGTCTCAACTTCAAATATTGATCGAGAATATTACTGCCAGGATAAGGTGATTTTTTTTATTTCTTTTTTACTTTTGTGTGTTTTGCATAAGAAAGTGGTTTATTTATTGGGATGTTATTTTTTTTTTTTTTTTGGTAACAAACTAGTGAAATATATGCATAGTTGCATACTATTACAGGACTAATGCTAACAATGAATAATAATTAGCAAACATTATCTGAGAGGATAATATGATCAATTGAAATGTTCGTATTGTTAGTTTAACAATGAATAATAATTAGCAAACATTATCTGAGAGGATAACATGATCAATTGAAATGTTGGTATTGTTAGTTTTTATGTTGAGGGTGGGGATCAACTCTTGAACTCCTTATCACTCCACTTCTTAACTCTCCCACCGTAGCCACCAAACCATCTTTATATCCAATATATAAGTGATTATGTGTAGTTATGTGCATGATAATAAAGTTCAACCATATCGGAATTAGGAGAGAGTATGAGGTGTTTATATATCTTTTAAGCCCAGTACTTCAATTGTGCGTGTCTTTGCAAGTATGTGGAGGGGTGAGTACTACAGTATCATAACTACAACTATTCCCCTAGGTAAAGTGAGTAAGCCATACAAAATGTACTCATTTAGGGGCAGCAGTATTGTCAAATAGCGGCTATAACGTAGTGAAATTTTGAACAAACTGCTTTTGTTGTGTGATACACGATTTAGTCCAAAACGTTGAAAAATAATGGATATAGTGTAACAAAATTTTAACTAACTTATATTTTCTGCAACCCGTGGTTGCAACACCTTTAGAGGGTAAGTTTTGACCCATGGTCAGGTCAGGCAAGCTCTTTATATGTGCATAGTTTTTTTAGTTTTTCATGGCCATCATGAAATATTAAAAGGACTACTAATAATTGTAAGCATTTACAACTGGTATCTATTACTCCAAACTTATAAAGCATTCAGCTGAACAAAAGACAGGTAATTAATATTGCAGCATGTTTCATAACCTTGAACCAAACAGGTTTAGAGATAAATTGTAATCATATAGACTGTACAAATTTGTAATTAATATTGGTGACACGTGTATTGCGAACTGACGGGTCCATTTTTTTGAGCATTATACATTTTAACAAGTTTAGGATATGAATTTATTGATACAACTAGTTGAAATGGAGATGTAACACTTGTACTGTTCCAGTCGTATTGATAAAACAAGTTGAAATGGAGATGTAAAACTTGTACTGTTCCAGTCGGTACAGACTTGTAGATACTATTTATCAACGGATTTTTATGATCTTGGATGAGATTGACTTGACTTCAAAATGTTTTTCTCTTGTCTAGAATAAATACTTAACAATTCTTTCTGAGAATATCTTCCGATTAATCTGCATGCTAAAGTTCCAATAGTCCATTCTAAAATGCAGATCGTAAGTCTTTTGTTGTGTTCTTGTTTGTTTTTATGTTGCTTTGTCCAGTAATTATGCTGAAAAGAAGATTAGGATAAGAGTTGACTGTAAAAAATTGTATCTCTTATAGACTCTGGTTATTTGTTTATTTTTATCCAGTGAATATATTGTGCAGGATGCCAGATGTTGTGCTAGCTGTGGTTTGATGTTGCCATGCAAAACCATGAAGAAGGTTAAGGATTCAAGTCATGCACCACAATTTCTATGCAAACATTGTGTCAAGGTTATACAGAAAGGCTTAATATAGTGCTTCAAAATTTTCACTAATTTTTTTTTCAATGTTAGATGATTTAAAAAAAGTTATATTCTGCTATTACAGTTACGAAAATCAAAACAATATTGTGGAATTTGCAAAAAGATTTGGCACCATTCAGATGGTGGGAATTGGGTGAGACTGTCTGTTGTCAATTTAGTTTCTTTCCTAATATTTATTTTAATATACTTTTGGTACAATAAATTCAAATTTTGATATCTTTTGGGAGCTCTTTGAATCAGGTATGTTGTGATGGTTGCAATGTATGGGTGCATGCTGAGTGTGATAAGATTTCTACCGAACATTTCAAGGTGTTGTGTCGTGGTTAATATGGAACAGTATACTAATTTCACATGATTGCTTTTTAAATACTTAGTTGGTTCACAAAGTGATTGAAATTGAATTTAAATGACTGGCTTCTGGTTGCAGGATCTGGAAAATACTGACTACTATTGTCCAGATTGCAAGGAAAGAATAAATTGTAAATTACCGGAATCACTGACATACAAGTCAAAAATCAAGTACATGTTAATCATCCATTGCTGTTTTCTTCTAATCCAGGGTATTCAGCATTTTATTTTATACTTTGAATCTTACTATGTGATATTTTTGAGACAGATCAGTGGAGAGTAGCCAAAATGTTGTGGTACCTGAGAAGTACAGATCAGTGGAGAATAGCCAAAACGGTGTGGTACCTGAGAAGTTAATGGTGGTGTGCAATGGAATGGAAGGAATTTACATCCCAAAGCTTCATTTGTAAGCCGTCAACCCTTCTTGGATATTATGGGATTGATAATCAACACACACACACACACACATTTATATTTATGTGTATATTCTGTTTTAATGTATACAAATCAATTTTATTTATGATTTTGCGTTTAACTATTACATGAGCATAATTCCAGTATTACTTGAAAAAGTAACTACTGTCAATCTTGATATGTCTACAAATCTGACTATTATCTTTACCATCAAAACAGTTTCAAAGACTTCCATTGAGTTGTTTGTGGTTGCATTTTTCAGAATTATGTGCAAGTGCGGTTCTTGTGATTCAAGGAAGCGGACACCTAGTCAATGGGAAAGACACACAGGAAGCAGAGCTAAAAAATGGAAATACAGTGTGAAAGTGAAAAGCACAATGCTACCGCTTGAAAAATGGGTTTGTATTAGTTCTTTCTGTATTGTGCCTTTCTTGTTACGAGGTGTTTCTTTCTCATTTTTGACTGACATCAACTACAGATCACAGAGCACATTTCAGAAGATGGAGTTTCCCAGGACTTGGATCAGCAGCAGGTGCTTGCCTTTTTGCAAGGTAAGTGTTCATTTCATGTAACTTTTATATACCAAAGCCTTAATTTTTTCTAGTTATGAAACATTCAGTTGCGCATCACTTGCATGCTTTCCCTTGAATATATCCGAAGGCAGAGATTTATTTATTTTTACTTGTTATGACAGAGAAGTATGAGCCAGTTCATGCAAAATGGACGACAGAAAGATGTGCTATTTGTAGATGGATCGAAGACTATGAGGATAACAAAATTATCATCTGCAACAGGTGTTTCAATTATTGTTGATCTTTACCCTTTTTTGTAGAATTATTTTGGACGATTCACATTTTGTTTCAAATTTACTAGGCGTTAAATTTACTAGGTTTTCTGGTTTATTATGCAGATGCCAAATAGCAGTCCACCAAGAATGCTATGGTGCAAAGCATGTGCAGGATTTTACTTCTTGGGTATGTAGAGTATGCGAAACCCCCGATGTTGAAAGAGAGTGTTGCCTTTGTCCAGTAAAAGGTACGTCAATCTAGTATTTTGGGCCAGTTTGAACTCTTTTTGTTCTTCCTGATCATTTATGTGATAAAGTGCTAATTTGCTTCTACTATATATGGAAAAATGATTTGCAGGTGGTGCTCTGAAGCCAACTGATGTCGAGATGTTGTGGGTTCATGTAACATGCGCTTGGTTTCAACGTGAAGTTGTTTTCAAAAACCCTGAGGTCATGGAACCTGCCCTCGGAATTCTTAGAATTCCTCCTACTTCCTTTGTGAAGGTGAGATGACGGGCTATAAGTTGATGTTATCATTTTTTAACCATTGGTTTCAGCTATAATGTTGACTTGTTTGGACACAGACCCAATATATAGAGAGAATGTATCAATTATAAGTCTTGCATAAAGATGAAAACTACCAGTTAATTATATCCCGAATGCATACTGGATGATTCTAAATTTGATTTGGCAGACAGTCCAAAATGTACCAGAAATCCAGAATGCATACTGGGCATGGTGTTCTGTTTTTTTGTATATCTTTAACTCGATATATTTTACACAAGTTGTACTCTACTTGATATTCGAACCAAAAGGCTTCATTCTTATGTATTTATGGATGACTATTCTTAAAGTTCATCCCTCCGAAGTACTCTCTGCTCAAATGTAATTCAACTCTAAATTCACTATATAATTTTCCACCTTCAGTTATATCTTTTTCTTCATTTATTCAGTAAGATATTGGCATAGTTGTAATTTAAATTACATTTGGCATTCCCTTCCATTTTTCTTTTATATTTAGGCTGGGCTGTATTCATAAACTAATGTTAATGTTTCTTGTCCACTGTGACTGCAGACTTGTGTAATTTGTAAACAAAGCCATGGTTCTTGTACAAGTTGTTGCAAGTGTTCTACTCATTTTCATGTAATGTGCGCATCAAGAGCTGGGTATACCATGGAAGTAAGTTTCATGTTTCTTTTAAGTTGATTAGGTTGATAAGAAACATTTGCTTTTTTCTTGATTTTTTCCTTCCTAGTCTCCTCTCTTTCTTTCGGAGGACTGGTGCATCCTTTGCGGTTCATCCAGAATAAATAATTTTTATGTATTTGAATTTATTCATGTGAGGATTACAAGAGCTTGGGAAATATGTTAATATTGTTTAGCCTTCAAACTTACAGTTGCATTCCATGGTGAAGAATGGGACTACAATAACAAAGAAGATAATATACTGCGCAGTTCATAGGTTTGTGCTCTAGTGACCGGTTATATATATTTTGCTATCTTCCTTTTTATTAATGATGTTTTATATGATAATTCATTATCAGAGTCCCAAGTCCAGATTCTGTACTGGTTTCACATTCATCCCTGGGGATATTTGCTCCCAGAACTTTGATTGAAAATCACAAGGGATGCTTCCGGGGATCAAGGCTGGTCTCATCAAAGAATATAGAGCTCAATGAAGGTTCATCCCGTGAAAATGATAGAGTCGAGCCATTTTCTACTGCGAGATGTCGTGTGTACCTAAGGTCTTCTAATAAGGTGATGATTCTATACATACTATATTATGGCCATAATAGTGTATTAACTGACCTATTCTTTTCCTTTTATTATGTTTTGTTTTATTTTATAATTTTTGTGGAAGAAATGATAATTTAACTTATTCATTCGTCGATATACAAGGATGCAATATTTGAGCAAAATTGGTTAGAAGAATACCTATGATGCACGACGATAATACTTTTATCAGATACGATACGTATCTGATACAATGATACATGATACACCGTTCTTTACAAATTATAGGATACAATACATTCATGATATGTATGCAAAAATTACAAAATATAATATTGAAGTAGATATCTAGGATGTCAATCATGCAAGCATGGAACAGTGGCCAGCCACCACTAGTAGACTAGGTGTATCAAACAATAAGGGTGCATGAGGTGTGTTGGTTTTCGCAGCAGTGCGACGTGGTTTTTTTCACGAAAGTGAAAGGGCATTTTGCACACTAAAGTTAGAGACGTTTCAGGGACATTTCTGGTATTTTGCACACTAAAAACCCTAATCTTCCTTTCCTTTCACGTTCCCTACACAAACTTCCTCCGCTCTGCGGCAGCAGAGACCTCTGTGTGGCCCAGACGCTGCTGAACCACTCTGTCGAGCCCAGCATTGTGCAGCAACCATACCAGGACATTCTGTTATTTGTGCAACAACCTTGAAAGCTTCATCTCAGACCATAGTTTAACTGTTTAAGTCGTAGGGACTTAAACTTGTTCGTTCCCTTGACTTTTGTTGATTTACATGTATGTTTTTAACAAGCTTATGAATATCTCGATATTCATAATATCGAGATATTATGTTAGCATCATAATTTATATAGTAGGATTAGTTTCTGATGTTAGAGTATTTTAGGTTATATCCTAAGATTGGTTATCATATTACTTGGTTATATTATCATGATTTTCCCCCTTATTTTGCTATTTATTTAGGATTAGGAGTCTTGCATTCCTGTAAATAGGGGTTAATGTTTAGTCTTTTGTGTCATCAAGTTATATTAGCAGTAATAATAATATTAAACCATCGTAATATTCAAAATCTTTATTATTTTATTGTCATCATTTTTTGTTTAAAAGTTAAAACCCATAACTTCACCATATAGTATGTAGTAACATCTTTATTCCTTTTTAGACTGCCAGGGACAAGTTTTAAGTTAAAAAAAATCTATGATCAGTTTTCTAGGTTACAATAGCAGTCTCAAATAGTTCCTCGAACATCATTGGCTGTCAGCAAGGCTTCCCAATTGATGGTTCCATTGCATTGTAAGGCACACAATAACGGAATTTTGATATTTCCATTTTTGCACTGAAGGATCATTTTTTCTTTGTTGTATAGTGTCTTCGGTTGGATACTTTTGTTTTCCTTCTCATCTAGTGTGAATTTTACAGAATGAACCCATTCAAGATAGTTCCTAGTTGGCTGCACCCTGATGGTAGAGGTTTTTGAGGGTTTTAGGGTTTCTTCTGTCATGGCCGTTTTCACATTTGTGGGAAGGTTTCTTCCGTCATGGTAGAGGTTTTAGAGGGATTCAGGGTTTCTTCTGTCATGGCCATTTTCACATTTGTGAGAAGGTTTCTACGTCAGAGCAAGATGCTCTGAATCTGATACCGTGTAATTTTTGGAGAGTAAATGACAATTTTATTTCTTATTTATTTGAAGTTGTACTAGAATGATAAACAGTACCAATTTGCTACAATCAGGGAAACGGAAATACAGATACTAAGGATAATAAACAAAACAGAAAATGGATCAGTTCTTAATCAGATAGTTCAGATTCTAATCTAATCTAAACTAATTCAAGTTGTTATATCTTATTGCTAACAAGCTTCTACTTATTTATAAGTCAACATATCCTTGGTTAGTTTGTCATATCAATGGCCATTCTTCAATGTTAAATCTTAACATTATATATATTTTGTCAATTTGGTCTCTTTACCACATTTTGTCCCATATTGCCAGAGAGCTGATGTGGCAATTATTCATTTGCTGAGGGGACCCAGTCTTCATTCTTTAGGTGAAATAACTCAATTGAACAACTATAAGGTAATTTTCACGGTCAGCATGATATATGTTTGACTTCATGCTTTTGAAATAAATAACTGGTCTTGCTTTTGACTGTAAAATGTGAAAGAAAAATGTTAATTTAATATCTTATAATATTGATTTGTGATAGGATGCTGAAGTATTCACTTCTTTCAAGGACCGTCTTCACCATCTGCAGGTATTACATATATTTTCATTTGCTAAAATTAATTGCTTGAATTGCTTATCTCAATTTTTAAAATCCCGTCTCTTATTTTTTTTTTTAATTTGAAGTAATTTTTTAATGTTTTGTAACAGAAAACTGAAAATCTTAGAATTTGCTTCGGAAAATCGGGTATTCATGGATGGGGTCTCTTTGCTCGAAGAGATCTACAAGAAGGAGATATGGTAACTTACTGTGTATTATTTTAATTAAGATGGTTTGCTTCAATTTCTTGTGAAGAAATAGAGTTCATGCTTGTTATGTTTGTCCACAGGTTGTTGAGTATCGAGGTGAGCAGGTAAGGCGTAGTGTCGCTGATCTGAGGGAAGCAAAATATCGTTCAGAAGGCAAAGATTGCTATGTGAGTCTCTTATTTAAGACGGATTGTACTACCAGTCTGTATTCTGCTTAACATAATGAAGCCTATAATAGTCACATTCAAAATGACATTATGTTTCATTCGTGTTATTTTAATTTCTTTCTATATTTGGTTCAAATGCCTGCATTAGACGGGTTCATGATTGCTGATAACATTTGAATTCATTCACTGCTATTCATAACACTAACTAATATAAATTATGCAGTTGTTCAAGATCAGCGAGGAGGTTGTCATCGATGCAACACACAAGGGCAATATAGCACGTTTAATAAACCACTCTGTACGTTTTTATTGGAAACTACTTGCAATGCGGGTTTTATTAAATATTGACTGAAAATTCTATGACTTGAGCTCAACTGTCCATTATGTTTTTTCTTTGAATATCAATTATGTGACTTTATATAAAGATATGTTACAATAGCAAACGAAAAACAGTATACTAATGTTCACTCTGATTTACTTTCAGTGCATGCCAAACTGCTATGCAAGGATTTTGAGTTTGGGTAATCAAGGGAACCGGATTGTTCTTATTGCGAAAACCAATGTTTCTGCTGGTCAAGAACTTACGTAAATTTCGTTCTGGATCCATGTTTGCGTATCTTTCAATGTGTACTCTCACATCTCCAAGCATGCATGGTATGTGGTATACTTGATTAACTTGTTTTTCTCTGATGTTGTAACAGGTATGATTACTTGTTCGATCCAGACGAGCCAGAAGAACTGAAAGTTCCCTGCCTTTGCAGAGCTCCCAACTGTAGAAAATTTATGAACTAG

Protein sequence

>MS.gene59552.t1

MVIKRSVKVEMPKLKRCKLDEPHCEDEEHEGCSGSQKKRKVNGFNSEVDFDTGSASLNSEVTNYGGVGEVELNSSRKTVKVRFSCGGPQVLPSSFEDDGKVMVKTGSNGSGSGLSFEGADEKNNGNVGRRKDVYRLEEFTLGDIVWAKCGKRFPAWPGVVIDPLSEAPQSVIDCCVPDTLCVMFFGYSKNGTRDYAWVKQGMVFPFAEFMNRFQGQTQLFKSKPSDFRKALEEAKLAEDGILESQLRAEEMTDLEAHPDKLQQVSTSNIDREYYCQDKDARCCASCGLMLPCKTMKKVKDSSHAPQFLCKHCVKLRKSKQYCGICKKIWHHSDGGNWVCCDGCNVWVHAECDKISTEHFKDLENTDYYCPDCKERINCKLPESLTYKSKIKSVESSQNVVVPEKYRSVENSQNGVVPEKLMVVCNGMEGIYIPKLHLIMCKCGSCDSRKRTPSQWERHTGSRAKKWKYSVKVKSTMLPLEKWITEHISEDGVSQDLDQQQVLAFLQEKYEPVHAKWTTERCAICRWIEDYEDNKIIICNRCQIAVHQECYGAKHVQDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFQREVVFKNPEVMEPALGILRIPPTSFVKTCVICKQSHGSCTSCCKCSTHFHVMCASRAGYTMELHSMVKNGTTITKKIIYCAVHRVPSPDSVLVSHSSLGIFAPRTLIENHKGCFRGSRLVSSKNIELNEGSSRENDRVEPFSTARCRVYLRSSNKRADVAIIHLLRGPSLHSLGEITQLNNYKDAEVFTSFKDRLHHLQKTENLRICFGKSGIHGWGLFARRDLQEGDMVVEYRGEQVRRSVADLREAKYRSEGKDCYLFKISEEVVIDATHKGNIARLINHSCMPNCYARILSLGNQGNRIVLIAKTNVSAGQELTYDYLFDPDEPEELKVPCLCRAPNCRKFMN