Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59583.t1 | XP_013444676.1 | 92.7 | 575 | 42 | 0 | 1 | 575 | 8 | 582 | 0.00E+00 | 1084.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59583.t1 | A0A314KSQ4 | 68.3 | 575 | 181 | 1 | 1 | 574 | 5 | 579 | 3.0e-243 | 842.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59583.t1 | A0A072TNA7 | 92.7 | 575 | 42 | 0 | 1 | 575 | 8 | 582 | 0.0e+00 | 1084.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051198 | MS.gene59583 | 0.805498 | 1.30E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene59583 | 0.814146 | 1.79E-51 | -1.69E-46 |
| MS.gene052037 | MS.gene59583 | 0.832637 | 8.44E-56 | -1.69E-46 |
| MS.gene052447 | MS.gene59583 | 0.808052 | 3.74E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene59583 | 0.816805 | 4.58E-52 | -1.69E-46 |
| MS.gene05423 | MS.gene59583 | 0.807625 | 4.61E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene59583 | 0.800258 | 1.57E-48 | -1.69E-46 |
| MS.gene056050 | MS.gene59583 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene59583 | 0.811025 | 8.60E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene59583 | 0.811271 | 7.61E-51 | -1.69E-46 |
| MS.gene058294 | MS.gene59583 | 0.807918 | 4.00E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene59583 | 0.819688 | 1.02E-52 | -1.69E-46 |
| MS.gene059439 | MS.gene59583 | 0.801009 | 1.10E-48 | -1.69E-46 |
| MS.gene060373 | MS.gene59583 | 0.802507 | 5.43E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59583 | MS.gene045936 | PPI |
| MS.gene59583 | MS.gene95748 | PPI |
| MS.gene59583 | MS.gene046033 | PPI |
| MS.gene59583 | MS.gene34650 | PPI |
| MS.gene59583 | MS.gene25516 | PPI |
| MS.gene59583 | MS.gene053964 | PPI |
| MS.gene59583 | MS.gene36841 | PPI |
| MS.gene59583 | MS.gene064168 | PPI |
| MS.gene59583 | MS.gene073214 | PPI |
| MS.gene59583 | MS.gene99230 | PPI |
| MS.gene59583 | MS.gene78774 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59583.t1 | MTR_8g027955 | 92.696 | 575 | 42 | 0 | 1 | 575 | 8 | 582 | 0.0 | 1110 |
| MS.gene59583.t1 | MTR_8g027920 | 88.870 | 575 | 64 | 0 | 1 | 575 | 1 | 575 | 0.0 | 1071 |
| MS.gene59583.t1 | MTR_8g027965 | 89.217 | 575 | 62 | 0 | 1 | 575 | 1 | 575 | 0.0 | 1065 |
| MS.gene59583.t1 | MTR_8g027970 | 79.130 | 575 | 120 | 0 | 1 | 575 | 1 | 575 | 0.0 | 971 |
| MS.gene59583.t1 | MTR_7g117110 | 73.575 | 579 | 149 | 1 | 1 | 575 | 1 | 579 | 0.0 | 911 |
| MS.gene59583.t1 | MTR_7g117110 | 74.378 | 402 | 99 | 1 | 1 | 398 | 1 | 402 | 0.0 | 631 |
| MS.gene59583.t1 | MTR_0102s0060 | 45.719 | 584 | 297 | 8 | 9 | 575 | 17 | 597 | 0.0 | 538 |
| MS.gene59583.t1 | MTR_5g016320 | 39.003 | 582 | 336 | 8 | 5 | 573 | 15 | 590 | 8.93e-144 | 429 |
| MS.gene59583.t1 | MTR_8g037720 | 62.305 | 321 | 95 | 2 | 259 | 575 | 137 | 435 | 3.34e-138 | 408 |
| MS.gene59583.t1 | MTR_8g037720 | 65.957 | 141 | 48 | 0 | 10 | 150 | 1 | 141 | 3.15e-53 | 187 |
| MS.gene59583.t1 | MTR_8g467000 | 36.960 | 579 | 343 | 7 | 11 | 571 | 15 | 589 | 7.52e-135 | 406 |
| MS.gene59583.t1 | MTR_0035s0150 | 38.053 | 565 | 336 | 8 | 12 | 571 | 21 | 576 | 1.64e-134 | 404 |
| MS.gene59583.t1 | MTR_4g045903 | 37.043 | 575 | 342 | 7 | 11 | 572 | 30 | 597 | 1.02e-132 | 400 |
| MS.gene59583.t1 | MTR_2g081860 | 37.113 | 582 | 341 | 7 | 11 | 571 | 14 | 591 | 1.27e-132 | 400 |
| MS.gene59583.t1 | MTR_1g088765 | 37.968 | 561 | 325 | 11 | 11 | 550 | 11 | 569 | 1.33e-124 | 379 |
| MS.gene59583.t1 | MTR_1g047730 | 62.977 | 262 | 82 | 3 | 318 | 575 | 112 | 362 | 6.00e-114 | 343 |
| MS.gene59583.t1 | MTR_1g047730 | 46.452 | 155 | 38 | 3 | 10 | 163 | 1 | 111 | 3.04e-28 | 116 |
| MS.gene59583.t1 | MTR_1g088765 | 38.407 | 427 | 241 | 10 | 142 | 550 | 3 | 425 | 8.80e-93 | 292 |
| MS.gene59583.t1 | MTR_7g094190 | 31.424 | 576 | 358 | 15 | 11 | 561 | 5 | 568 | 3.56e-85 | 276 |
| MS.gene59583.t1 | MTR_7g094190 | 31.364 | 440 | 272 | 12 | 140 | 561 | 41 | 468 | 5.48e-63 | 215 |
| MS.gene59583.t1 | MTR_7g094330 | 32.222 | 270 | 146 | 6 | 140 | 405 | 41 | 277 | 1.04e-36 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59583.t1 | AT2G46370 | 64.991 | 577 | 197 | 4 | 1 | 574 | 12 | 586 | 0.0 | 796 |
| MS.gene59583.t1 | AT2G46370 | 64.991 | 577 | 197 | 4 | 1 | 574 | 1 | 575 | 0.0 | 796 |
| MS.gene59583.t1 | AT2G46370 | 64.991 | 577 | 197 | 4 | 1 | 574 | 1 | 575 | 0.0 | 796 |
| MS.gene59583.t1 | AT2G46370 | 65.863 | 498 | 167 | 2 | 78 | 574 | 1 | 496 | 0.0 | 712 |
| MS.gene59583.t1 | AT4G03400 | 47.350 | 585 | 286 | 8 | 11 | 575 | 9 | 591 | 0.0 | 548 |
| MS.gene59583.t1 | AT4G03400 | 47.350 | 585 | 286 | 8 | 11 | 575 | 9 | 591 | 0.0 | 548 |
| MS.gene59583.t1 | AT4G27260 | 39.094 | 596 | 331 | 9 | 2 | 571 | 7 | 596 | 3.42e-143 | 427 |
| MS.gene59583.t1 | AT2G23170 | 39.649 | 570 | 331 | 7 | 12 | 573 | 21 | 585 | 1.58e-141 | 422 |
| MS.gene59583.t1 | AT1G23160 | 38.927 | 578 | 327 | 10 | 9 | 572 | 13 | 578 | 2.19e-139 | 417 |
| MS.gene59583.t1 | AT4G37390 | 38.957 | 575 | 331 | 9 | 12 | 571 | 22 | 591 | 5.84e-139 | 416 |
| MS.gene59583.t1 | AT2G14960 | 39.298 | 570 | 327 | 9 | 12 | 573 | 21 | 579 | 1.02e-138 | 415 |
| MS.gene59583.t1 | AT1G59500 | 40.035 | 572 | 323 | 10 | 12 | 571 | 22 | 585 | 1.03e-136 | 410 |
| MS.gene59583.t1 | AT5G54510 | 38.045 | 573 | 333 | 8 | 17 | 571 | 28 | 596 | 4.34e-135 | 407 |
| MS.gene59583.t1 | AT5G13320 | 38.169 | 579 | 334 | 10 | 8 | 571 | 5 | 574 | 3.70e-133 | 400 |
| MS.gene59583.t1 | AT5G13320 | 38.169 | 579 | 334 | 10 | 8 | 571 | 5 | 574 | 3.70e-133 | 400 |
| MS.gene59583.t1 | AT5G13320 | 38.169 | 579 | 334 | 10 | 8 | 571 | 20 | 589 | 3.87e-133 | 401 |
| MS.gene59583.t1 | AT1G48660 | 37.018 | 570 | 339 | 9 | 14 | 571 | 7 | 568 | 6.27e-131 | 395 |
| MS.gene59583.t1 | AT5G51470 | 38.581 | 578 | 334 | 9 | 3 | 571 | 6 | 571 | 3.48e-130 | 393 |
| MS.gene59583.t1 | AT1G48660 | 36.684 | 567 | 342 | 8 | 14 | 571 | 7 | 565 | 3.90e-130 | 392 |
| MS.gene59583.t1 | AT2G47750 | 37.759 | 580 | 343 | 10 | 5 | 571 | 3 | 577 | 6.72e-125 | 379 |
| MS.gene59583.t1 | AT5G13360 | 36.897 | 580 | 340 | 13 | 9 | 571 | 9 | 579 | 5.97e-121 | 370 |
| MS.gene59583.t1 | AT5G13360 | 36.897 | 580 | 340 | 13 | 9 | 571 | 9 | 579 | 5.97e-121 | 370 |
| MS.gene59583.t1 | AT5G13350 | 35.593 | 590 | 348 | 16 | 4 | 571 | 1 | 580 | 6.94e-121 | 369 |
| MS.gene59583.t1 | AT5G13350 | 35.593 | 590 | 348 | 16 | 4 | 571 | 1 | 580 | 6.94e-121 | 369 |
| MS.gene59583.t1 | AT5G13360 | 36.897 | 580 | 340 | 13 | 9 | 571 | 87 | 657 | 3.74e-120 | 370 |
| MS.gene59583.t1 | AT5G13370 | 36.780 | 590 | 341 | 15 | 4 | 571 | 1 | 580 | 6.75e-120 | 367 |
| MS.gene59583.t1 | AT1G28130 | 35.893 | 599 | 337 | 12 | 9 | 571 | 9 | 596 | 1.48e-117 | 361 |
| MS.gene59583.t1 | AT5G13380 | 36.411 | 574 | 335 | 13 | 17 | 571 | 47 | 609 | 2.32e-115 | 356 |
| MS.gene59583.t1 | AT5G51470 | 38.302 | 483 | 282 | 6 | 98 | 571 | 6 | 481 | 2.27e-105 | 326 |
| MS.gene59583.t1 | AT1G48670 | 33.510 | 567 | 307 | 11 | 16 | 571 | 10 | 517 | 7.99e-99 | 310 |
| MS.gene59583.t1 | AT1G48670 | 38.250 | 400 | 231 | 8 | 181 | 571 | 14 | 406 | 4.66e-91 | 286 |
| MS.gene59583.t1 | AT1G28130 | 35.982 | 453 | 247 | 9 | 152 | 571 | 11 | 453 | 2.45e-88 | 281 |
| MS.gene59583.t1 | AT1G48690 | 35.106 | 188 | 117 | 3 | 14 | 200 | 7 | 190 | 6.64e-26 | 105 |
Find 115 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACATGCCTTGAAGCTTTC+AGG | 0.188228 | 8.2:-69438063 | None:intergenic |
| GGAAACACTGAAGAAGATTT+TGG | 0.215335 | 8.2:+69437984 | MS.gene59583:CDS |
| TCAGAACATTTGAACAAGTT+TGG | 0.223044 | 8.2:+69439260 | MS.gene59583:CDS |
| CCTAATGCTAAGTATGTTCT+AGG | 0.223934 | 8.2:+69439454 | MS.gene59583:CDS |
| AACATAGTGTCCTGGTTCTT+TGG | 0.254133 | 8.2:-69440680 | None:intergenic |
| CATAATGCTCAAGAATCTTC+TGG | 0.275515 | 8.2:-69440858 | None:intergenic |
| ATTGGTCACTTACAAAGATT+TGG | 0.278435 | 8.2:+69438089 | MS.gene59583:CDS |
| CTTGAGCATTATGTTGGATT+AGG | 0.283059 | 8.2:+69440868 | MS.gene59583:CDS |
| GCTAACTCAGGAGCCTCTTT+AGG | 0.283945 | 8.2:-69439595 | None:intergenic |
| CCTCTGTTGACTTCTGAATA+TGG | 0.289061 | 8.2:+69439538 | MS.gene59583:CDS |
| CCTAGAACATACTTAGCATT+AGG | 0.297424 | 8.2:-69439454 | None:intergenic |
| GTTGTTAGTTGAGGAGAAAA+TGG | 0.315180 | 8.2:+69440624 | MS.gene59583:CDS |
| CAGAACATTTGAACAAGTTT+GGG | 0.318569 | 8.2:+69439261 | MS.gene59583:CDS |
| ATTCCTTTGAATCAACTTGA+TGG | 0.320686 | 8.2:+69439658 | MS.gene59583:CDS |
| CAGGACACTATGTTATCTTC+TGG | 0.331531 | 8.2:+69440689 | MS.gene59583:CDS |
| TGGATCAAGTTAGCTAGTTC+AGG | 0.340099 | 8.2:-69439379 | None:intergenic |
| TCAACTATTCTATTGATATA+AGG | 0.342032 | 8.2:-69438114 | None:intergenic |
| TTGCAGGCTTATACAGATAT+AGG | 0.345650 | 8.2:+69440458 | MS.gene59583:intron |
| AAGTTAGCTAGTTCAGGATT+TGG | 0.373912 | 8.2:-69439373 | None:intergenic |
| GCTGAATACTTGCAGAGTTT+AGG | 0.375997 | 8.2:+69438021 | MS.gene59583:CDS |
| CAAAGTGTTGCAAATATTGT+TGG | 0.376494 | 8.2:+69440942 | MS.gene59583:CDS |
| TGATGAATGTTGCACATGTT+TGG | 0.385814 | 8.2:+69440744 | MS.gene59583:CDS |
| TAGAGTGATTGGTGAAAATC+TGG | 0.387996 | 8.2:-69439154 | None:intergenic |
| CTTAAGGAAATATCAGTGAT+TGG | 0.397201 | 8.2:-69438168 | None:intergenic |
| AACTGATCCTGAAAGCTTCA+AGG | 0.401122 | 8.2:+69438056 | MS.gene59583:CDS |
| AATGCATAGGATTGAGCAAT+TGG | 0.406780 | 8.2:+69439407 | MS.gene59583:CDS |
| CTAGAACATACTTAGCATTA+GGG | 0.409837 | 8.2:-69439453 | None:intergenic |
| TCCGAACAAGTCGGAGTTCA+AGG | 0.425031 | 8.2:-69440825 | None:intergenic |
| GGACTGAATATTACATCATC+TGG | 0.427889 | 8.2:-69439133 | None:intergenic |
| AGCAAATTATCACAAACAAA+AGG | 0.430347 | 8.2:+69439019 | MS.gene59583:CDS |
| GCAAATTATCACAAACAAAA+GGG | 0.434836 | 8.2:+69439020 | MS.gene59583:CDS |
| CTGCAAAGAAACTTGATCTC+TGG | 0.436174 | 8.2:-69440523 | None:intergenic |
| CAATCACTGATATTTCCTTA+AGG | 0.436796 | 8.2:+69438169 | MS.gene59583:CDS |
| CAACAATATTTGCAACACTT+TGG | 0.436954 | 8.2:-69440941 | None:intergenic |
| TGCAACACTTTGGTGTTTGT+AGG | 0.437781 | 8.2:-69440931 | None:intergenic |
| AAGATTCTTGAGCATTATGT+TGG | 0.450012 | 8.2:+69440862 | MS.gene59583:CDS |
| CTTGTTCCTAAAGACAAAAG+AGG | 0.450622 | 8.2:-69438365 | None:intergenic |
| GAATCAACTTGATGGAACTA+AGG | 0.452348 | 8.2:+69439666 | MS.gene59583:CDS |
| ATTTACAGTACCTGCAGGAT+TGG | 0.452654 | 8.2:-69439752 | None:intergenic |
| TATATCAATAGAATAGTTGA+TGG | 0.455629 | 8.2:+69438117 | MS.gene59583:CDS |
| CAATGTTGATTGTGAGCATA+AGG | 0.455989 | 8.2:-69440552 | None:intergenic |
| TTCAAGACACCTAGGTGTAT+TGG | 0.458890 | 8.2:+69440907 | MS.gene59583:CDS |
| AATTCAAAGTAAGCAATTTG+AGG | 0.463474 | 8.2:-69439634 | None:intergenic |
| TTGCAGAGTTTAGGACTCAA+TGG | 0.466761 | 8.2:+69438030 | MS.gene59583:CDS |
| AATATGGTGCTTCTGAGGGT+TGG | 0.467338 | 8.2:+69439554 | MS.gene59583:CDS |
| TGCAGCTCTGGTACTAGTCA+AGG | 0.468076 | 8.2:+69438280 | MS.gene59583:intron |
| TTTCTCCTCAACTAACAACT+TGG | 0.471374 | 8.2:-69440620 | None:intergenic |
| TGATCTCTGGAGCTGAGTTA+TGG | 0.471692 | 8.2:-69440510 | None:intergenic |
| GTTCCATCAAGTTGATTCAA+AGG | 0.473335 | 8.2:-69439661 | None:intergenic |
| TTCTGAATATGGTGCTTCTG+AGG | 0.477242 | 8.2:+69439549 | MS.gene59583:CDS |
| CCCTTGAACTCCGACTTGTT+CGG | 0.477568 | 8.2:+69440824 | MS.gene59583:CDS |
| GAGAGGCTAACAAAGGATGC+TGG | 0.479734 | 8.2:+69437949 | MS.gene59583:CDS |
| AGGGATCATGACAGGTTCAA+TGG | 0.486740 | 8.2:+69439474 | MS.gene59583:CDS |
| TGAAAAGTAGTCCACATAAG+AGG | 0.487540 | 8.2:-69439183 | None:intergenic |
| AGAGGTGACAGTAGAGTGAT+TGG | 0.487873 | 8.2:-69439165 | None:intergenic |
| AAGCAGAACTAAAATAGCTC+TGG | 0.487883 | 8.2:-69440975 | None:intergenic |
| GACATAGCAATTCTAATGGA+TGG | 0.489863 | 8.2:-69439337 | None:intergenic |
| GGAGATGCGGTAAAGGTCAC+GGG | 0.492799 | 8.2:+69440484 | MS.gene59583:CDS |
| GCTGCTGTAGATGAAGCTTA+AGG | 0.493940 | 8.2:-69438999 | None:intergenic |
| ACAAATGTGTTCAGAAATCC+AGG | 0.498059 | 8.2:+69439067 | MS.gene59583:CDS |
| TTCATCGCATGTCTGTATCC+TGG | 0.504627 | 8.2:-69439085 | None:intergenic |
| AGGACACTATGTTATCTTCT+GGG | 0.504762 | 8.2:+69440690 | MS.gene59583:CDS |
| GGATGCTGGGAATGTTCAAA+AGG | 0.507958 | 8.2:+69437963 | MS.gene59583:CDS |
| TTTCTAGAACTAACATAGCC+AGG | 0.508065 | 8.2:-69440784 | None:intergenic |
| TTCAAATGTGAATCCTAAAG+AGG | 0.508857 | 8.2:+69439582 | MS.gene59583:CDS |
| AGGAGATGCGGTAAAGGTCA+CGG | 0.511505 | 8.2:+69440483 | MS.gene59583:CDS |
| CTTCAAGGCATGTGTTCCAT+TGG | 0.511917 | 8.2:+69438071 | MS.gene59583:CDS |
| CTCTACTGTCACCTCTTATG+TGG | 0.514303 | 8.2:+69439172 | MS.gene59583:CDS |
| GGTTTAACTGATGTGAAGAT+TGG | 0.514334 | 8.2:+69439706 | MS.gene59583:CDS |
| TCAATCCTATGCATTTCTTG+TGG | 0.525426 | 8.2:-69439399 | None:intergenic |
| TCTGAATATGGTGCTTCTGA+GGG | 0.529824 | 8.2:+69439550 | MS.gene59583:CDS |
| CTTGTTACTGATATCAAAGA+AGG | 0.530181 | 8.2:+69439289 | MS.gene59583:CDS |
| TCAAACAATTCAGCATTCCA+TGG | 0.540156 | 8.2:-69438319 | None:intergenic |
| TAGGCTAGGAGATGCGGTAA+AGG | 0.545407 | 8.2:+69440477 | MS.gene59583:CDS |
| CCGAACAAGTCGGAGTTCAA+GGG | 0.559483 | 8.2:-69440824 | None:intergenic |
| AGAGGCTAACAAAGGATGCT+GGG | 0.561325 | 8.2:+69437950 | MS.gene59583:CDS |
| CAATTGGTATGGATTGATAC+CGG | 0.565341 | 8.2:+69439423 | MS.gene59583:CDS |
| ATTGTTCTCACCAATCCTGC+AGG | 0.569627 | 8.2:+69439742 | MS.gene59583:CDS |
| AAATCTTTGTAAGTGACCAA+TGG | 0.572733 | 8.2:-69438087 | None:intergenic |
| ATCATCTGGACTGACACTAT+CGG | 0.577706 | 8.2:-69439119 | None:intergenic |
| GCAGCTCTGGTACTAGTCAA+GGG | 0.578389 | 8.2:+69438281 | MS.gene59583:intron |
| TAAGGTAGAGCTTGAGCCAG+TGG | 0.580352 | 8.2:+69439684 | MS.gene59583:CDS |
| TTCACATCAGTTAAACCCAC+TGG | 0.584475 | 8.2:-69439700 | None:intergenic |
| TTGATCCACAAGAAATGCAT+AGG | 0.591375 | 8.2:+69439394 | MS.gene59583:CDS |
| CAGAAGATAACATAGTGTCC+TGG | 0.592657 | 8.2:-69440688 | None:intergenic |
| CTAATGCTAAGTATGTTCTA+GGG | 0.593411 | 8.2:+69439455 | MS.gene59583:CDS |
| ATCGTCCAAGTTGTTAGTTG+AGG | 0.596707 | 8.2:+69440615 | MS.gene59583:CDS |
| AAGGTAGAGCTTGAGCCAGT+GGG | 0.598049 | 8.2:+69439685 | MS.gene59583:CDS |
| AAGTGATAGAAGAATTTGAG+AGG | 0.600729 | 8.2:+69437932 | MS.gene59583:CDS |
| ACAACATAAGTAGCTAACTC+AGG | 0.606822 | 8.2:-69439607 | None:intergenic |
| TGTTGGATTAGGTGCATCCG+CGG | 0.607062 | 8.2:+69440879 | MS.gene59583:CDS |
| TATGTTCTAGGGATCATGAC+AGG | 0.608440 | 8.2:+69439466 | MS.gene59583:CDS |
| CAGATATAGGCTAGGAGATG+CGG | 0.610483 | 8.2:+69440471 | MS.gene59583:CDS |
| GTTAGTTCTAGAAAAGTCAA+AGG | 0.611504 | 8.2:+69440793 | MS.gene59583:CDS |
| TTAGCATTAGGGAAAAGCTC+CGG | 0.616345 | 8.2:-69439442 | None:intergenic |
| AATAATTGAGAAATTTGACA+TGG | 0.619152 | 8.2:+69437906 | MS.gene59583:CDS |
| GGCTTATACAGATATAGGCT+AGG | 0.619603 | 8.2:+69440463 | MS.gene59583:intron |
| ATAGGATTGAGCAATTGGTA+TGG | 0.622644 | 8.2:+69439412 | MS.gene59583:CDS |
| TAGAAAAGTCAAAGGTATTG+CGG | 0.623191 | 8.2:+69440801 | MS.gene59583:CDS |
| GAACTCCGACTTGTTCGGAA+AGG | 0.630222 | 8.2:+69440829 | MS.gene59583:CDS |
| CAAATTATCACAAACAAAAG+GGG | 0.631674 | 8.2:+69439021 | MS.gene59583:CDS |
| CGGCTCAATTCAAGACACCT+AGG | 0.633848 | 8.2:+69440899 | MS.gene59583:CDS |
| ATTTCTGAACACATTTGTTG+TGG | 0.633999 | 8.2:-69439062 | None:intergenic |
| AGAATTTGAGAGGCTAACAA+AGG | 0.640125 | 8.2:+69437942 | MS.gene59583:CDS |
| GTTATCTTCTGGGAAATCAG+TGG | 0.640384 | 8.2:+69440700 | MS.gene59583:CDS |
| ATGTTCCTTTCCGAACAAGT+CGG | 0.642426 | 8.2:-69440834 | None:intergenic |
| GTTGAGACACTATGCAGGAG+AGG | 0.647395 | 8.2:+69439513 | MS.gene59583:CDS |
| ATTGATTTATCCAAAGAACC+AGG | 0.665402 | 8.2:+69440670 | MS.gene59583:CDS |
| AGGTGTCTTGAATTGAGCCG+CGG | 0.680345 | 8.2:-69440896 | None:intergenic |
| ATGTTCTGAAAGCATACACA+AGG | 0.681370 | 8.2:-69439246 | None:intergenic |
| AAATTATCACAAACAAAAGG+GGG | 0.682053 | 8.2:+69439022 | MS.gene59583:CDS |
| TTTGTAGGACCAATACACCT+AGG | 0.702315 | 8.2:-69440916 | None:intergenic |
| GGTTTGATATATCTTCACTG+TGG | 0.723029 | 8.2:-69438344 | None:intergenic |
| CCATATTCAGAAGTCAACAG+AGG | 0.745189 | 8.2:-69439538 | None:intergenic |
| GAGATGCGGTAAAGGTCACG+GGG | 0.752976 | 8.2:+69440485 | MS.gene59583:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAAAAACAAATGTTAA+GGG | + | chr8.2:69440145-69440164 | MS.gene59583:intron | 10.0% |
| !!! | TTAGTTTTTCAAATTATTAT+CGG | - | chr8.2:69438801-69438820 | None:intergenic | 10.0% |
| !!! | TTCATTTTTTAAATTACTAT+CGG | + | chr8.2:69438531-69438550 | MS.gene59583:intron | 10.0% |
| !! | AAAAATAAATTCATATAGCA+TGG | - | chr8.2:69438732-69438751 | None:intergenic | 15.0% |
| !! | GTTATAAAAAACAAATGTTA+AGG | + | chr8.2:69440144-69440163 | MS.gene59583:intron | 15.0% |
| !! | TATAAAAAACAAATGTTAAG+GGG | + | chr8.2:69440146-69440165 | MS.gene59583:intron | 15.0% |
| !!! | TAGTTTTTCAAATTATTATC+GGG | - | chr8.2:69438800-69438819 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTATAACCATTT+AGG | - | chr8.2:69440139-69440158 | None:intergenic | 15.0% |
| !! | AATAATTGAGAAATTTGACA+TGG | + | chr8.2:69437906-69437925 | MS.gene59583:CDS | 20.0% |
| !! | ATGTTTGTGATAATTAATCT+TGG | + | chr8.2:69440430-69440449 | MS.gene59583:intron | 20.0% |
| !! | CAATACTATATTATGTTGTA+AGG | + | chr8.2:69440059-69440078 | MS.gene59583:intron | 20.0% |
| !! | CTTACAACATAATATAGTAT+TGG | - | chr8.2:69440061-69440080 | None:intergenic | 20.0% |
| !! | GTTACATATTTAATGTGATT+AGG | - | chr8.2:69440260-69440279 | None:intergenic | 20.0% |
| !! | TACTAATTGCATGTAAAAAT+GGG | - | chr8.2:69440341-69440360 | None:intergenic | 20.0% |
| !! | TATATCAATAGAATAGTTGA+TGG | + | chr8.2:69438117-69438136 | MS.gene59583:CDS | 20.0% |
| !! | TCAACTATTCTATTGATATA+AGG | - | chr8.2:69438117-69438136 | None:intergenic | 20.0% |
| !! | TTCATTTCTCAAATTATCAT+TGG | - | chr8.2:69438639-69438658 | None:intergenic | 20.0% |
| !!! | AGTTTTTCAAATTATTATCG+GGG | - | chr8.2:69438799-69438818 | None:intergenic | 20.0% |
| !!! | ATTACTGGTTAGTTTATATT+GGG | + | chr8.2:69440027-69440046 | MS.gene59583:intron | 20.0% |
| ! | AAAAATATCACCAGGTAAAA+TGG | - | chr8.2:69440388-69440407 | None:intergenic | 25.0% |
| ! | AAATCTGTAAAAATATCACC+AGG | - | chr8.2:69440396-69440415 | None:intergenic | 25.0% |
| ! | AAATTATCACAAACAAAAGG+GGG | + | chr8.2:69439022-69439041 | MS.gene59583:CDS | 25.0% |
| ! | AATTCAAAGTAAGCAATTTG+AGG | - | chr8.2:69439637-69439656 | None:intergenic | 25.0% |
| ! | AGCAAATTATCACAAACAAA+AGG | + | chr8.2:69439019-69439038 | MS.gene59583:CDS | 25.0% |
| ! | AGTAAAGAATGAATGATTAC+TGG | + | chr8.2:69440012-69440031 | MS.gene59583:intron | 25.0% |
| ! | CAAATTATCACAAACAAAAG+GGG | + | chr8.2:69439021-69439040 | MS.gene59583:CDS | 25.0% |
| ! | GCAAATTATCACAAACAAAA+GGG | + | chr8.2:69439020-69439039 | MS.gene59583:CDS | 25.0% |
| ! | GTACTAATTGCATGTAAAAA+TGG | - | chr8.2:69440342-69440361 | None:intergenic | 25.0% |
| ! | TACTATATTATGTTGTAAGG+TGG | + | chr8.2:69440062-69440081 | MS.gene59583:intron | 25.0% |
| ! | TGTCAAATATAGACATGTAT+TGG | - | chr8.2:69438472-69438491 | None:intergenic | 25.0% |
| !! | ATTAATCTTGGATAATTTGC+AGG | + | chr8.2:69440442-69440461 | MS.gene59583:intron | 25.0% |
| !! | TTTTACACATTCAAATGAGA+AGG | - | chr8.2:69438222-69438241 | None:intergenic | 25.0% |
| !! | TTTTGACATAGCAATTCTAA+TGG | - | chr8.2:69439344-69439363 | None:intergenic | 25.0% |
| !!! | CAATTTAGTCCTTGTTATTA+AGG | + | chr8.2:69439907-69439926 | MS.gene59583:intron | 25.0% |
| !!! | GATTACTGGTTAGTTTATAT+TGG | + | chr8.2:69440026-69440045 | MS.gene59583:intron | 25.0% |
| AAAAAATTTACAGTACCTGC+AGG | - | chr8.2:69439760-69439779 | None:intergenic | 30.0% | |
| AAATCTTTGTAAGTGACCAA+TGG | - | chr8.2:69438090-69438109 | None:intergenic | 30.0% | |
| AAGATTCTTGAGCATTATGT+TGG | + | chr8.2:69440862-69440881 | MS.gene59583:CDS | 30.0% | |
| AAGTGATAGAAGAATTTGAG+AGG | + | chr8.2:69437932-69437951 | MS.gene59583:CDS | 30.0% | |
| ACTTCAATTATGTGCTACAT+AGG | - | chr8.2:69438437-69438456 | None:intergenic | 30.0% | |
| AGAGAGTTTCCTATCAAAAA+TGG | + | chr8.2:69438971-69438990 | MS.gene59583:intron | 30.0% | |
| AGTACTATGTTCCTTATGTA+GGG | - | chr8.2:69440236-69440255 | None:intergenic | 30.0% | |
| ATAATTGTGGAGGATTTGAT+TGG | + | chr8.2:69440085-69440104 | MS.gene59583:intron | 30.0% | |
| ATAGGAAACTCTCTACATAA+TGG | - | chr8.2:69438965-69438984 | None:intergenic | 30.0% | |
| ATTCCTTTGAATCAACTTGA+TGG | + | chr8.2:69439658-69439677 | MS.gene59583:CDS | 30.0% | |
| ATTGGTCACTTACAAAGATT+TGG | + | chr8.2:69438089-69438108 | MS.gene59583:CDS | 30.0% | |
| CAACAATATTTGCAACACTT+TGG | - | chr8.2:69440944-69440963 | None:intergenic | 30.0% | |
| CAATCACTGATATTTCCTTA+AGG | + | chr8.2:69438169-69438188 | MS.gene59583:CDS | 30.0% | |
| CAGAACATTTGAACAAGTTT+GGG | + | chr8.2:69439261-69439280 | MS.gene59583:CDS | 30.0% | |
| CGTATCATCAAGCATATAAA+AGG | - | chr8.2:69440180-69440199 | None:intergenic | 30.0% | |
| CTAATGCTAAGTATGTTCTA+GGG | + | chr8.2:69439455-69439474 | MS.gene59583:CDS | 30.0% | |
| CTAGAACATACTTAGCATTA+GGG | - | chr8.2:69439456-69439475 | None:intergenic | 30.0% | |
| CTTAAGGAAATATCAGTGAT+TGG | - | chr8.2:69438171-69438190 | None:intergenic | 30.0% | |
| CTTCAGATTAAAGATGTGTT+TGG | - | chr8.2:69438706-69438725 | None:intergenic | 30.0% | |
| CTTGTTACTGATATCAAAGA+AGG | + | chr8.2:69439289-69439308 | MS.gene59583:CDS | 30.0% | |
| GGAAGCAAAAATATATACCA+TGG | + | chr8.2:69438302-69438321 | MS.gene59583:CDS | 30.0% | |
| GGATACAAATCACCTAAATT+TGG | - | chr8.2:69440215-69440234 | None:intergenic | 30.0% | |
| GTGTAAAAGTTAGAAGTTTC+TGG | + | chr8.2:69438234-69438253 | MS.gene59583:intron | 30.0% | |
| TAGTACTATGTTCCTTATGT+AGG | - | chr8.2:69440237-69440256 | None:intergenic | 30.0% | |
| TCAGAACATTTGAACAAGTT+TGG | + | chr8.2:69439260-69439279 | MS.gene59583:CDS | 30.0% | |
| TCCATAACACCTTAATAACA+AGG | - | chr8.2:69439919-69439938 | None:intergenic | 30.0% | |
| TGAAGAGACTAATACTCTAA+AGG | - | chr8.2:69439830-69439849 | None:intergenic | 30.0% | |
| TTACATGCAATTAGTACTAG+TGG | + | chr8.2:69440345-69440364 | MS.gene59583:intron | 30.0% | |
| TTCAAATGTGAATCCTAAAG+AGG | + | chr8.2:69439582-69439601 | MS.gene59583:CDS | 30.0% | |
| ! | ATCAAACCTCTTTTGTCTTT+AGG | + | chr8.2:69438359-69438378 | MS.gene59583:CDS | 30.0% |
| ! | ATTGATTTATCCAAAGAACC+AGG | + | chr8.2:69440670-69440689 | MS.gene59583:CDS | 30.0% |
| ! | ATTTCTGAACACATTTGTTG+TGG | - | chr8.2:69439065-69439084 | None:intergenic | 30.0% |
| ! | TATGCTTATTCCATTTTACC+TGG | + | chr8.2:69440375-69440394 | MS.gene59583:intron | 30.0% |
| !! | CAAAGTGTTGCAAATATTGT+TGG | + | chr8.2:69440942-69440961 | MS.gene59583:CDS | 30.0% |
| !! | GTTAGTTCTAGAAAAGTCAA+AGG | + | chr8.2:69440793-69440812 | MS.gene59583:CDS | 30.0% |
| !! | TAGAAAAGTCAAAGGTATTG+CGG | + | chr8.2:69440801-69440820 | MS.gene59583:CDS | 30.0% |
| !! | TCCTTGTTATTAAGGTGTTA+TGG | + | chr8.2:69439915-69439934 | MS.gene59583:intron | 30.0% |
| AAAAAGTTGAGACACTATGC+AGG | + | chr8.2:69439508-69439527 | MS.gene59583:CDS | 35.0% | |
| AAGCAGAACTAAAATAGCTC+TGG | - | chr8.2:69440978-69440997 | None:intergenic | 35.0% | |
| AAGTTAGCTAGTTCAGGATT+TGG | - | chr8.2:69439376-69439395 | None:intergenic | 35.0% | |
| AATGCATAGGATTGAGCAAT+TGG | + | chr8.2:69439407-69439426 | MS.gene59583:CDS | 35.0% | |
| ACAAATGTGTTCAGAAATCC+AGG | + | chr8.2:69439067-69439086 | MS.gene59583:CDS | 35.0% | |
| ACAACATAAGTAGCTAACTC+AGG | - | chr8.2:69439610-69439629 | None:intergenic | 35.0% | |
| AGAATTTGAGAGGCTAACAA+AGG | + | chr8.2:69437942-69437961 | MS.gene59583:CDS | 35.0% | |
| AGGACACTATGTTATCTTCT+GGG | + | chr8.2:69440690-69440709 | MS.gene59583:CDS | 35.0% | |
| ATAGGATTGAGCAATTGGTA+TGG | + | chr8.2:69439412-69439431 | MS.gene59583:CDS | 35.0% | |
| CAGACATTTCTTCAATGTGT+CGG | + | chr8.2:69438887-69438906 | MS.gene59583:intron | 35.0% | |
| CATAATGCTCAAGAATCTTC+TGG | - | chr8.2:69440861-69440880 | None:intergenic | 35.0% | |
| CCTAATGCTAAGTATGTTCT+AGG | + | chr8.2:69439454-69439473 | MS.gene59583:CDS | 35.0% | |
| CCTAGAACATACTTAGCATT+AGG | - | chr8.2:69439457-69439476 | None:intergenic | 35.0% | |
| CGACGTATCAGTATCATATT+CGG | - | chr8.2:69438775-69438794 | None:intergenic | 35.0% | |
| CTTGAGCATTATGTTGGATT+AGG | + | chr8.2:69440868-69440887 | MS.gene59583:CDS | 35.0% | |
| CTTGTTCCTAAAGACAAAAG+AGG | - | chr8.2:69438368-69438387 | None:intergenic | 35.0% | |
| GAATCAACTTGATGGAACTA+AGG | + | chr8.2:69439666-69439685 | MS.gene59583:CDS | 35.0% | |
| GACATAGCAATTCTAATGGA+TGG | - | chr8.2:69439340-69439359 | None:intergenic | 35.0% | |
| GGACTGAATATTACATCATC+TGG | - | chr8.2:69439136-69439155 | None:intergenic | 35.0% | |
| GGTTTAACTGATGTGAAGAT+TGG | + | chr8.2:69439706-69439725 | MS.gene59583:CDS | 35.0% | |
| GGTTTGATATATCTTCACTG+TGG | - | chr8.2:69438347-69438366 | None:intergenic | 35.0% | |
| GTTGTTAGTTGAGGAGAAAA+TGG | + | chr8.2:69440624-69440643 | MS.gene59583:CDS | 35.0% | |
| GTTTCCTATCAAAAATGGCA+AGG | + | chr8.2:69438976-69438995 | MS.gene59583:CDS | 35.0% | |
| TAGAGTGATTGGTGAAAATC+TGG | - | chr8.2:69439157-69439176 | None:intergenic | 35.0% | |
| TATTTCCTGCCTATGAAGTA+CGG | + | chr8.2:69438591-69438610 | MS.gene59583:intron | 35.0% | |
| TCAAACAATTCAGCATTCCA+TGG | - | chr8.2:69438322-69438341 | None:intergenic | 35.0% | |
| TCAATCCTATGCATTTCTTG+TGG | - | chr8.2:69439402-69439421 | None:intergenic | 35.0% | |
| TGAAAAGTAGTCCACATAAG+AGG | - | chr8.2:69439186-69439205 | None:intergenic | 35.0% | |
| TGATACGATGTTGACATATG+TGG | + | chr8.2:69438493-69438512 | MS.gene59583:intron | 35.0% | |
| TGATGAATGTTGCACATGTT+TGG | + | chr8.2:69440744-69440763 | MS.gene59583:CDS | 35.0% | |
| TGTCTCATAGTCATACCTTA+AGG | - | chr8.2:69438187-69438206 | None:intergenic | 35.0% | |
| TGTTGTAAGGTGGATAATTG+TGG | + | chr8.2:69440072-69440091 | MS.gene59583:intron | 35.0% | |
| TTGATCCACAAGAAATGCAT+AGG | + | chr8.2:69439394-69439413 | MS.gene59583:CDS | 35.0% | |
| TTGCAGGCTTATACAGATAT+AGG | + | chr8.2:69440458-69440477 | MS.gene59583:intron | 35.0% | |
| TTTCTCCTCAACTAACAACT+TGG | - | chr8.2:69440623-69440642 | None:intergenic | 35.0% | |
| TTTCTGCTAGTTAGCTAGAA+TGG | + | chr8.2:69438921-69438940 | MS.gene59583:intron | 35.0% | |
| ! | CAATGTTGATTGTGAGCATA+AGG | - | chr8.2:69440555-69440574 | None:intergenic | 35.0% |
| ! | CAATTGGTATGGATTGATAC+CGG | + | chr8.2:69439423-69439442 | MS.gene59583:CDS | 35.0% |
| ! | GACAAAGCTTTTAGCCTAAA+TGG | + | chr8.2:69440122-69440141 | MS.gene59583:intron | 35.0% |
| ! | GACAAGTCTTTTATTGATCC+TGG | + | chr8.2:69440766-69440785 | MS.gene59583:CDS | 35.0% |
| ! | GATTTTTCTCCTATTCTCAC+TGG | + | chr8.2:69438141-69438160 | MS.gene59583:CDS | 35.0% |
| ! | GGAAACACTGAAGAAGATTT+TGG | + | chr8.2:69437984-69438003 | MS.gene59583:CDS | 35.0% |
| ! | GTGATTTGTATCCCTACATA+AGG | + | chr8.2:69440222-69440241 | MS.gene59583:intron | 35.0% |
| ! | TACTCTAAAGGCTGAATTGA+AGG | - | chr8.2:69439818-69439837 | None:intergenic | 35.0% |
| !! | ATGTTCTGAAAGCATACACA+AGG | - | chr8.2:69439249-69439268 | None:intergenic | 35.0% |
| !! | GTTCCATCAAGTTGATTCAA+AGG | - | chr8.2:69439664-69439683 | None:intergenic | 35.0% |
| !! | TTTCTAGAACTAACATAGCC+AGG | - | chr8.2:69440787-69440806 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTCCAGTGAGAAT+AGG | - | chr8.2:69438153-69438172 | None:intergenic | 35.0% |
| AACTGATCCTGAAAGCTTCA+AGG | + | chr8.2:69438056-69438075 | MS.gene59583:CDS | 40.0% | |
| ACCAACATGGGACCAAATTT+AGG | + | chr8.2:69440200-69440219 | MS.gene59583:intron | 40.0% | |
| ACCTAAATTTGGTCCCATGT+TGG | - | chr8.2:69440204-69440223 | None:intergenic | 40.0% | |
| ACTGACATGGTGTGATTTGA+AGG | - | chr8.2:69440310-69440329 | None:intergenic | 40.0% | |
| ATCATCTGGACTGACACTAT+CGG | - | chr8.2:69439122-69439141 | None:intergenic | 40.0% | |
| ATCGTCCAAGTTGTTAGTTG+AGG | + | chr8.2:69440615-69440634 | MS.gene59583:CDS | 40.0% | |
| ATGTTCCTTTCCGAACAAGT+CGG | - | chr8.2:69440837-69440856 | None:intergenic | 40.0% | |
| ATTTACAGTACCTGCAGGAT+TGG | - | chr8.2:69439755-69439774 | None:intergenic | 40.0% | |
| CAGAAGATAACATAGTGTCC+TGG | - | chr8.2:69440691-69440710 | None:intergenic | 40.0% | |
| CAGGACACTATGTTATCTTC+TGG | + | chr8.2:69440689-69440708 | MS.gene59583:CDS | 40.0% | |
| CCATATTCAGAAGTCAACAG+AGG | - | chr8.2:69439541-69439560 | None:intergenic | 40.0% | |
| CTGCAAAGAAACTTGATCTC+TGG | - | chr8.2:69440526-69440545 | None:intergenic | 40.0% | |
| GCTGAATACTTGCAGAGTTT+AGG | + | chr8.2:69438021-69438040 | MS.gene59583:CDS | 40.0% | |
| GGCTTATACAGATATAGGCT+AGG | + | chr8.2:69440463-69440482 | MS.gene59583:intron | 40.0% | |
| TACTATCGGTGTATACATGC+CGG | + | chr8.2:69438545-69438564 | MS.gene59583:intron | 40.0% | |
| TCTGAATATGGTGCTTCTGA+GGG | + | chr8.2:69439550-69439569 | MS.gene59583:CDS | 40.0% | |
| TGGATCAAGTTAGCTAGTTC+AGG | - | chr8.2:69439382-69439401 | None:intergenic | 40.0% | |
| TGTAAGGTGGATAATTGTGG+AGG | + | chr8.2:69440075-69440094 | MS.gene59583:intron | 40.0% | |
| TGTCTGACACCAATACACAT+GGG | + | chr8.2:69438860-69438879 | MS.gene59583:intron | 40.0% | |
| TTAGCATTAGGGAAAAGCTC+CGG | - | chr8.2:69439445-69439464 | None:intergenic | 40.0% | |
| TTCAAGACACCTAGGTGTAT+TGG | + | chr8.2:69440907-69440926 | MS.gene59583:CDS | 40.0% | |
| TTCACATCAGTTAAACCCAC+TGG | - | chr8.2:69439703-69439722 | None:intergenic | 40.0% | |
| TTCTGAATATGGTGCTTCTG+AGG | + | chr8.2:69439549-69439568 | MS.gene59583:CDS | 40.0% | |
| TTGTCTGACACCAATACACA+TGG | + | chr8.2:69438859-69438878 | MS.gene59583:intron | 40.0% | |
| TTTGTAGGACCAATACACCT+AGG | - | chr8.2:69440919-69440938 | None:intergenic | 40.0% | |
| ! | AACATAGTGTCCTGGTTCTT+TGG | - | chr8.2:69440683-69440702 | None:intergenic | 40.0% |
| ! | CTTGATGATACGACCAACAT+GGG | + | chr8.2:69440188-69440207 | MS.gene59583:intron | 40.0% |
| ! | GTCTGTTTTCCCATGTGTAT+TGG | - | chr8.2:69438872-69438891 | None:intergenic | 40.0% |
| ! | GTTATCTTCTGGGAAATCAG+TGG | + | chr8.2:69440700-69440719 | MS.gene59583:CDS | 40.0% |
| ! | TTGCAGAGTTTAGGACTCAA+TGG | + | chr8.2:69438030-69438049 | MS.gene59583:CDS | 40.0% |
| !! | CCTCTGTTGACTTCTGAATA+TGG | + | chr8.2:69439538-69439557 | MS.gene59583:CDS | 40.0% |
| !! | TATGTTCTAGGGATCATGAC+AGG | + | chr8.2:69439466-69439485 | MS.gene59583:CDS | 40.0% |
| !! | TGCAACACTTTGGTGTTTGT+AGG | - | chr8.2:69440934-69440953 | None:intergenic | 40.0% |
| !!! | AAGGCCTTGCCATTTTTGAT+AGG | - | chr8.2:69438983-69439002 | None:intergenic | 40.0% |
| ACACATGCCTTGAAGCTTTC+AGG | - | chr8.2:69438066-69438085 | None:intergenic | 45.0% | |
| AGAGGCTAACAAAGGATGCT+GGG | + | chr8.2:69437950-69437969 | MS.gene59583:CDS | 45.0% | |
| AGAGGTGACAGTAGAGTGAT+TGG | - | chr8.2:69439168-69439187 | None:intergenic | 45.0% | |
| AGGGATCATGACAGGTTCAA+TGG | + | chr8.2:69439474-69439493 | MS.gene59583:CDS | 45.0% | |
| ATACATGCCGGCGTCTATTT+AGG | + | chr8.2:69438557-69438576 | MS.gene59583:intron | 45.0% | |
| ATGGGATAGTGACACTGACA+TGG | - | chr8.2:69440323-69440342 | None:intergenic | 45.0% | |
| ATTGTTCTCACCAATCCTGC+AGG | + | chr8.2:69439742-69439761 | MS.gene59583:CDS | 45.0% | |
| CAAGTATGCAACGTCGTTGT+TGG | + | chr8.2:69438677-69438696 | MS.gene59583:intron | 45.0% | |
| CAGATATAGGCTAGGAGATG+CGG | + | chr8.2:69440471-69440490 | MS.gene59583:CDS | 45.0% | |
| CTCTACTGTCACCTCTTATG+TGG | + | chr8.2:69439172-69439191 | MS.gene59583:CDS | 45.0% | |
| CTGCCTATGAAGTACGGATA+CGG | + | chr8.2:69438597-69438616 | MS.gene59583:intron | 45.0% | |
| CTTCAAGGCATGTGTTCCAT+TGG | + | chr8.2:69438071-69438090 | MS.gene59583:CDS | 45.0% | |
| GCTGCTGTAGATGAAGCTTA+AGG | - | chr8.2:69439002-69439021 | None:intergenic | 45.0% | |
| GGATGCTGGGAATGTTCAAA+AGG | + | chr8.2:69437963-69437982 | MS.gene59583:CDS | 45.0% | |
| TTCATCGCATGTCTGTATCC+TGG | - | chr8.2:69439088-69439107 | None:intergenic | 45.0% | |
| ! | AATATGGTGCTTCTGAGGGT+TGG | + | chr8.2:69439554-69439573 | MS.gene59583:CDS | 45.0% |
| ! | GCTTGATGATACGACCAACA+TGG | + | chr8.2:69440187-69440206 | MS.gene59583:intron | 45.0% |
| !! | GTGTTGTGTTTTTGCAGCTC+TGG | + | chr8.2:69438268-69438287 | MS.gene59583:intron | 45.0% |
| !! | TGATCTCTGGAGCTGAGTTA+TGG | - | chr8.2:69440513-69440532 | None:intergenic | 45.0% |
| AAGGTAGAGCTTGAGCCAGT+GGG | + | chr8.2:69439685-69439704 | MS.gene59583:CDS | 50.0% | |
| AGGAGATGCGGTAAAGGTCA+CGG | + | chr8.2:69440483-69440502 | MS.gene59583:CDS | 50.0% | |
| AGGTGTCTTGAATTGAGCCG+CGG | - | chr8.2:69440899-69440918 | None:intergenic | 50.0% | |
| CCGAACAAGTCGGAGTTCAA+GGG | - | chr8.2:69440827-69440846 | None:intergenic | 50.0% | |
| CGGCTCAATTCAAGACACCT+AGG | + | chr8.2:69440899-69440918 | MS.gene59583:CDS | 50.0% | |
| CGTATCCGTACTTCATAGGC+AGG | - | chr8.2:69438599-69438618 | None:intergenic | 50.0% | |
| GAGAGGCTAACAAAGGATGC+TGG | + | chr8.2:69437949-69437968 | MS.gene59583:CDS | 50.0% | |
| GCTAACTCAGGAGCCTCTTT+AGG | - | chr8.2:69439598-69439617 | None:intergenic | 50.0% | |
| GTGCCGTATCCGTACTTCAT+AGG | - | chr8.2:69438603-69438622 | None:intergenic | 50.0% | |
| GTTGAGACACTATGCAGGAG+AGG | + | chr8.2:69439513-69439532 | MS.gene59583:CDS | 50.0% | |
| TAAGGTAGAGCTTGAGCCAG+TGG | + | chr8.2:69439684-69439703 | MS.gene59583:CDS | 50.0% | |
| TAGGCTAGGAGATGCGGTAA+AGG | + | chr8.2:69440477-69440496 | MS.gene59583:CDS | 50.0% | |
| TCCGAACAAGTCGGAGTTCA+AGG | - | chr8.2:69440828-69440847 | None:intergenic | 50.0% | |
| ! | CCCTTGAACTCCGACTTGTT+CGG | + | chr8.2:69440824-69440843 | MS.gene59583:CDS | 50.0% |
| ! | CGAAGCACCTAAATAGACGC+CGG | - | chr8.2:69438567-69438586 | None:intergenic | 50.0% |
| ! | GAACTCCGACTTGTTCGGAA+AGG | + | chr8.2:69440829-69440848 | MS.gene59583:CDS | 50.0% |
| ! | GCAGCTCTGGTACTAGTCAA+GGG | + | chr8.2:69438281-69438300 | MS.gene59583:intron | 50.0% |
| ! | TGCAGCTCTGGTACTAGTCA+AGG | + | chr8.2:69438280-69438299 | MS.gene59583:intron | 50.0% |
| ! | TGTTGGATTAGGTGCATCCG+CGG | + | chr8.2:69440879-69440898 | MS.gene59583:CDS | 50.0% |
| GAGATGCGGTAAAGGTCACG+GGG | + | chr8.2:69440485-69440504 | MS.gene59583:CDS | 55.0% | |
| GGAGATGCGGTAAAGGTCAC+GGG | + | chr8.2:69440484-69440503 | MS.gene59583:CDS | 55.0% | |
| ! | ACAAAAGGGGGTGTGACAGC+AGG | + | chr8.2:69439034-69439053 | MS.gene59583:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 69437898 | 69441005 | 69437898 | ID=MS.gene59583 |
| chr8.2 | mRNA | 69437898 | 69441005 | 69437898 | ID=MS.gene59583.t1;Parent=MS.gene59583 |
| chr8.2 | exon | 69437898 | 69438190 | 69437898 | ID=MS.gene59583.t1.exon1;Parent=MS.gene59583.t1 |
| chr8.2 | CDS | 69437898 | 69438190 | 69437898 | ID=cds.MS.gene59583.t1;Parent=MS.gene59583.t1 |
| chr8.2 | exon | 69438285 | 69438386 | 69438285 | ID=MS.gene59583.t1.exon2;Parent=MS.gene59583.t1 |
| chr8.2 | CDS | 69438285 | 69438386 | 69438285 | ID=cds.MS.gene59583.t1;Parent=MS.gene59583.t1 |
| chr8.2 | exon | 69438973 | 69439763 | 69438973 | ID=MS.gene59583.t1.exon3;Parent=MS.gene59583.t1 |
| chr8.2 | CDS | 69438973 | 69439763 | 69438973 | ID=cds.MS.gene59583.t1;Parent=MS.gene59583.t1 |
| chr8.2 | exon | 69440464 | 69441005 | 69440464 | ID=MS.gene59583.t1.exon4;Parent=MS.gene59583.t1 |
| chr8.2 | CDS | 69440464 | 69441005 | 69440464 | ID=cds.MS.gene59583.t1;Parent=MS.gene59583.t1 |
| Gene Sequence |
| Protein sequence |
