Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65399.t1 | XP_003604258.1 | 95 | 340 | 17 | 0 | 26 | 365 | 37 | 376 | 7.70E-180 | 639.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65399.t1 | P49243 | 71.1 | 342 | 94 | 2 | 26 | 364 | 64 | 403 | 1.3e-138 | 494.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65399.t1 | G7JEG5 | 95.0 | 340 | 17 | 0 | 26 | 365 | 37 | 376 | 5.5e-180 | 639.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050584 | MS.gene65399 | 0.823277 | 1.51E-53 | -1.69E-46 |
| MS.gene050585 | MS.gene65399 | 0.831518 | 1.60E-55 | -1.69E-46 |
| MS.gene050586 | MS.gene65399 | 0.813865 | 2.06E-51 | -1.69E-46 |
| MS.gene050587 | MS.gene65399 | 0.800003 | 1.77E-48 | -1.69E-46 |
| MS.gene050762 | MS.gene65399 | 0.805173 | 1.52E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene65399 | 0.806886 | 6.62E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene65399 | 0.841301 | 5.16E-58 | -1.69E-46 |
| MS.gene051789 | MS.gene65399 | 0.875127 | 3.94E-68 | -1.69E-46 |
| MS.gene052142 | MS.gene65399 | 0.803414 | 3.53E-49 | -1.69E-46 |
| MS.gene052967 | MS.gene65399 | 0.824201 | 9.18E-54 | -1.69E-46 |
| MS.gene053074 | MS.gene65399 | 0.895186 | 1.22E-75 | -1.69E-46 |
| MS.gene053204 | MS.gene65399 | 0.886185 | 4.26E-72 | -1.69E-46 |
| MS.gene054184 | MS.gene65399 | 0.829605 | 4.69E-55 | -1.69E-46 |
| MS.gene054185 | MS.gene65399 | 0.829903 | 3.97E-55 | -1.69E-46 |
| MS.gene054214 | MS.gene65399 | 0.805974 | 1.03E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene65399 | 0.804289 | 2.32E-49 | -1.69E-46 |
| MS.gene05456 | MS.gene65399 | 0.81839 | 2.01E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene65399 | 0.989013 | 2.49E-176 | -1.69E-46 |
| MS.gene055207 | MS.gene65399 | 0.816859 | 4.45E-52 | -1.69E-46 |
| MS.gene055359 | MS.gene65399 | 0.808425 | 3.12E-50 | -1.69E-46 |
| MS.gene057754 | MS.gene65399 | 0.803717 | 3.05E-49 | -1.69E-46 |
| MS.gene058168 | MS.gene65399 | 0.836897 | 7.15E-57 | -1.69E-46 |
| MS.gene059006 | MS.gene65399 | 0.868858 | 4.77E-66 | -1.69E-46 |
| MS.gene059124 | MS.gene65399 | 0.813942 | 1.98E-51 | -1.69E-46 |
| MS.gene060476 | MS.gene65399 | 0.802375 | 5.78E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65399.t1 | MTR_4g007180 | 95.000 | 340 | 17 | 0 | 26 | 365 | 37 | 376 | 0.0 | 659 |
| MS.gene65399.t1 | MTR_2g105100 | 72.941 | 340 | 92 | 0 | 26 | 365 | 57 | 396 | 0.0 | 521 |
| MS.gene65399.t1 | MTR_5g009640 | 65.700 | 207 | 52 | 1 | 159 | 365 | 168 | 355 | 2.77e-89 | 273 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65399.t1 | AT1G62640 | 71.053 | 342 | 94 | 2 | 26 | 364 | 64 | 403 | 0.0 | 513 |
| MS.gene65399.t1 | AT1G62640 | 71.053 | 342 | 94 | 2 | 26 | 364 | 64 | 403 | 0.0 | 513 |
Find 68 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTAAACGTCGAGTTCTTTC+AGG | 0.225004 | 4.3:+88191096 | MS.gene65399:CDS |
| CATGAATATGAATACTTCTT+TGG | 0.249673 | 4.3:-88193066 | None:intergenic |
| CCACTACATCAATAATTCTT+TGG | 0.266849 | 4.3:-88193377 | None:intergenic |
| ATTATTGCTGCTTCTGGCTT+TGG | 0.274041 | 4.3:+88193528 | MS.gene65399:CDS |
| TAATGCATCAGACTCAATTA+AGG | 0.282247 | 4.3:+88193026 | MS.gene65399:CDS |
| AGTTAGAAGTGGAAAGATTA+AGG | 0.293816 | 4.3:+88193497 | MS.gene65399:CDS |
| GGACAAATTATTGCTGCTTC+TGG | 0.294045 | 4.3:+88193522 | MS.gene65399:CDS |
| AGATGACGTGGCAATGTAAA+TGG | 0.296329 | 4.3:+88188887 | None:intergenic |
| GCTTTGGTGCTGGTCTTACT+TGG | 0.297418 | 4.3:+88193544 | MS.gene65399:CDS |
| TTTCAAAATGTTCTTGTAAT+CGG | 0.300523 | 4.3:+88192406 | MS.gene65399:CDS |
| GCATGTAGTGGATTTATCTT+TGG | 0.313034 | 4.3:+88192263 | MS.gene65399:CDS |
| TATCAGCTGCTAGTCACATT+AGG | 0.325626 | 4.3:+88192291 | MS.gene65399:CDS |
| ATCAGCTGCTAGTCACATTA+GGG | 0.332459 | 4.3:+88192292 | MS.gene65399:CDS |
| ATATCAAATGTGGCTGATTA+TGG | 0.349357 | 4.3:+88193432 | MS.gene65399:CDS |
| AGAAGTTCATGTATTCTGTT+TGG | 0.357805 | 4.3:+88192466 | MS.gene65399:CDS |
| GCTGCTTCTGGCTTTGGTGC+TGG | 0.385323 | 4.3:+88193534 | MS.gene65399:CDS |
| CTTTGGTGCTGGTCTTACTT+GGG | 0.392366 | 4.3:+88193545 | MS.gene65399:CDS |
| TGACTTTGGCACACTCTGTA+TGG | 0.403255 | 4.3:-88193124 | None:intergenic |
| CTCTTTCGAGATATATCGAT+TGG | 0.434773 | 4.3:+88192437 | MS.gene65399:CDS |
| GTGGCAATGTAAATGGCTTC+TGG | 0.442908 | 4.3:+88188894 | MS.gene65399:CDS |
| GAATATGAATACTTCTTTGG+AGG | 0.473078 | 4.3:-88193063 | None:intergenic |
| TAGTTGATACTTCTGATGAA+TGG | 0.482232 | 4.3:+88191052 | MS.gene65399:CDS |
| TGCTGCCTCTACTGATAAAG+TGG | 0.490848 | 4.3:-88191845 | None:intergenic |
| AATGCATCAGACTCAATTAA+GGG | 0.492850 | 4.3:+88193027 | MS.gene65399:CDS |
| GCTGTAATGTTATAAGCTGC+TGG | 0.494699 | 4.3:-88192239 | None:intergenic |
| TAGATGAACACACCAAGATT+AGG | 0.495759 | 4.3:-88191912 | None:intergenic |
| TGACTGGTTACTTCTCCATC+AGG | 0.499458 | 4.3:+88193191 | MS.gene65399:CDS |
| AGTGCTGACTCAATTGACTT+TGG | 0.500820 | 4.3:-88193138 | None:intergenic |
| AGAAGTGGAAAGATTAAGGA+AGG | 0.501824 | 4.3:+88193501 | MS.gene65399:CDS |
| CCAAAGAATTATTGATGTAG+TGG | 0.502244 | 4.3:+88193377 | MS.gene65399:CDS |
| TACCTGCATCCAGCATTGAC+TGG | 0.503751 | 4.3:+88193175 | MS.gene65399:CDS |
| TTTCAGATTTCAAAACAGCT+TGG | 0.504851 | 4.3:+88192203 | MS.gene65399:intron |
| AATTGAGTCAGCACTTCAAA+AGG | 0.505835 | 4.3:+88193146 | MS.gene65399:CDS |
| AATGCAGCATATAAAGAAGA+AGG | 0.507598 | 4.3:+88192997 | MS.gene65399:CDS |
| GAGAAGTAACCAGTCAATGC+TGG | 0.509382 | 4.3:-88193184 | None:intergenic |
| TTTGGTGCTGGTCTTACTTG+GGG | 0.514017 | 4.3:+88193546 | MS.gene65399:CDS |
| AACCAGTCAATGCTGGATGC+AGG | 0.515256 | 4.3:-88193177 | None:intergenic |
| TATTCATGCATACATATGAA+TGG | 0.524043 | 4.3:+88193081 | MS.gene65399:CDS |
| AAGTGCAGCTTCCATTCCAT+TGG | 0.525636 | 4.3:+88193461 | MS.gene65399:CDS |
| GGCTGCAAGCTGGTAGGATG+TGG | 0.526765 | 4.3:+88190982 | MS.gene65399:CDS |
| CTTTGCAGACTTGTTAGTCA+AGG | 0.528713 | 4.3:+88190961 | MS.gene65399:intron |
| AACTCGACGTTTACGAATCC+CGG | 0.530634 | 4.3:-88191088 | None:intergenic |
| AACATTACAGCTGCATGTAG+TGG | 0.532984 | 4.3:+88192251 | MS.gene65399:CDS |
| ATTCTGTTTGGAGATGCTGC+TGG | 0.537982 | 4.3:+88192478 | MS.gene65399:CDS |
| GAGATGGCAAAGGTTGATCC+AGG | 0.538042 | 4.3:+88191880 | MS.gene65399:CDS |
| TGCTGGTGCTGTTCTAGTAC+AGG | 0.539004 | 4.3:+88192495 | MS.gene65399:CDS |
| TCATTAGTAATCTCAAGAGT+TGG | 0.547090 | 4.3:-88191015 | None:intergenic |
| GAGTCAGCACTTCAAAAGGC+TGG | 0.548884 | 4.3:+88193150 | MS.gene65399:CDS |
| TTAGATGAATCAGTTAGAAG+TGG | 0.549460 | 4.3:+88193486 | MS.gene65399:CDS |
| GCGCCTAGGCGCAGATGACG+TGG | 0.550042 | 4.3:+88188875 | None:intergenic |
| ACTGATTCATCTAAAGCCAA+TGG | 0.554412 | 4.3:-88193477 | None:intergenic |
| TTCATCTAAAGCCAATGGAA+TGG | 0.563272 | 4.3:-88193472 | None:intergenic |
| CTTGACCACTTTATCAGTAG+AGG | 0.564880 | 4.3:+88191840 | MS.gene65399:CDS |
| AATGGATAAGTGTTCGCACC+GGG | 0.577062 | 4.3:+88191070 | MS.gene65399:CDS |
| AGGTGATGTTGACCTAATCT+TGG | 0.581165 | 4.3:+88191900 | MS.gene65399:CDS |
| GAATGGATAAGTGTTCGCAC+CGG | 0.581811 | 4.3:+88191069 | MS.gene65399:CDS |
| ATGCAGCATATAAAGAAGAA+GGG | 0.586575 | 4.3:+88192998 | MS.gene65399:CDS |
| CTTTATCAGTAGAGGCAGCA+AGG | 0.593587 | 4.3:+88191848 | MS.gene65399:CDS |
| TGTTAGTCAAGGCTGCAAGC+TGG | 0.594953 | 4.3:+88190972 | MS.gene65399:CDS |
| AGTCAAGGCTGCAAGCTGGT+AGG | 0.597236 | 4.3:+88190976 | MS.gene65399:CDS |
| AAGATTAGGTCAACATCACC+TGG | 0.602574 | 4.3:-88191898 | None:intergenic |
| TGCAGCATATAAAGAAGAAG+GGG | 0.606045 | 4.3:+88192999 | MS.gene65399:CDS |
| CAGAATACATGAACTTCTGT+CGG | 0.609245 | 4.3:-88192461 | None:intergenic |
| AGCAAGGAAAGCTCTTGAGA+TGG | 0.614431 | 4.3:+88191864 | MS.gene65399:CDS |
| GATTTGAATAGTGATGGTGA+TGG | 0.616422 | 4.3:+88192743 | MS.gene65399:CDS |
| TCAGCTGCTAGTCACATTAG+GGG | 0.630404 | 4.3:+88192293 | MS.gene65399:CDS |
| GAAAGCTCTTGAGATGGCAA+AGG | 0.633878 | 4.3:+88191870 | MS.gene65399:CDS |
| ATTGCAGGCGTGCAACTACG+AGG | 0.723991 | 4.3:+88192700 | MS.gene65399:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTATTTACAACATTT+AGG | - | chr4.3:88192361-88192380 | None:intergenic | 10.0% |
| !! | ATATAGTAATATATTTGATT+AGG | + | chr4.3:88193292-88193311 | MS.gene65399:intron | 10.0% |
| !! | GATTAAAAAAAATTAAAATC+AGG | + | chr4.3:88190891-88190910 | MS.gene65399:intron | 10.0% |
| !! | TAATCAAATATATTACTATA+TGG | - | chr4.3:88193293-88193312 | None:intergenic | 10.0% |
| !! | TATAGTAATATATTTGATTA+GGG | + | chr4.3:88193293-88193312 | MS.gene65399:intron | 10.0% |
| !! | TATATTGATAAAAGATTAAT+AGG | + | chr4.3:88190486-88190505 | MS.gene65399:intron | 10.0% |
| !!! | CTTTTTACTTATATAAAAAT+TGG | - | chr4.3:88192021-88192040 | None:intergenic | 10.0% |
| !!! | TTAATCATAAAAAAAAGTTT+TGG | - | chr4.3:88193253-88193272 | None:intergenic | 10.0% |
| !!! | TTTACATTAAATTTTAAAAG+TGG | - | chr4.3:88189145-88189164 | None:intergenic | 10.0% |
| !! | CTCTATAAATTAATAATTTC+AGG | - | chr4.3:88190457-88190476 | None:intergenic | 15.0% |
| !! | TCTAAATTAATAAATTTCTG+CGG | + | chr4.3:88190430-88190449 | MS.gene65399:intron | 15.0% |
| !!! | AAACTCTTTAATTTAATACT+CGG | - | chr4.3:88189630-88189649 | None:intergenic | 15.0% |
| !!! | AAGTAAAAAGTACATATATA+TGG | + | chr4.3:88192031-88192050 | MS.gene65399:intron | 15.0% |
| !!! | AATTTAGGGAAATTTATTTT+TGG | - | chr4.3:88193223-88193242 | None:intergenic | 15.0% |
| !!! | ATTAAATTTTAAAAGTGGTA+AGG | - | chr4.3:88189140-88189159 | None:intergenic | 15.0% |
| !!! | ATTATTTGTTATAAGATGTA+AGG | + | chr4.3:88189919-88189938 | MS.gene65399:intron | 15.0% |
| !!! | CATTTTTTTATAAATCAATG+AGG | + | chr4.3:88189428-88189447 | MS.gene65399:intron | 15.0% |
| !!! | TATTTTCATTGAGATTTAAA+TGG | + | chr4.3:88192626-88192645 | MS.gene65399:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | - | chr4.3:88189592-88189611 | None:intergenic | 15.0% |
| !!! | TTCATTTTATATTATACACT+AGG | - | chr4.3:88190074-88190093 | None:intergenic | 15.0% |
| !! | AAGATAATAATATTTCGACT+TGG | - | chr4.3:88189522-88189541 | None:intergenic | 20.0% |
| !! | AGATAATAATATTTCGACTT+GGG | - | chr4.3:88189521-88189540 | None:intergenic | 20.0% |
| !! | ATAACTAAATTATGGTTAGT+TGG | - | chr4.3:88190578-88190597 | None:intergenic | 20.0% |
| !! | ATATATTTGATTAGGGAAAA+AGG | + | chr4.3:88193300-88193319 | MS.gene65399:intron | 20.0% |
| !! | ATTTAGTTATCAACTAACTA+TGG | + | chr4.3:88190588-88190607 | MS.gene65399:intron | 20.0% |
| !! | CTATTCATTATAAACAAATG+TGG | + | chr4.3:88190626-88190645 | MS.gene65399:intron | 20.0% |
| !! | GAAGAAAAAAAAATGTAGTT+TGG | - | chr4.3:88191432-88191451 | None:intergenic | 20.0% |
| !! | TAAATACTGAATTATTAGCA+TGG | - | chr4.3:88193335-88193354 | None:intergenic | 20.0% |
| !! | TATATATCCAATGTCTTATA+AGG | + | chr4.3:88191686-88191705 | MS.gene65399:intron | 20.0% |
| !! | TGTAATAAAAAAAATTGCAC+AGG | - | chr4.3:88190823-88190842 | None:intergenic | 20.0% |
| !! | TTTCAAAATGTTCTTGTAAT+CGG | + | chr4.3:88192406-88192425 | MS.gene65399:CDS | 20.0% |
| !!! | AAATTGTTTTGAGATATTGT+TGG | + | chr4.3:88191244-88191263 | MS.gene65399:intron | 20.0% |
| !!! | AGTTACTTTTTGTTGAATTA+AGG | + | chr4.3:88192324-88192343 | MS.gene65399:intron | 20.0% |
| !!! | ATCAGTTGATAATATAAGTT+TGG | - | chr4.3:88191488-88191507 | None:intergenic | 20.0% |
| !!! | ATTCACATTTTCATCTAATA+TGG | - | chr4.3:88191639-88191658 | None:intergenic | 20.0% |
| !!! | ATTTACTTGTTGATAAATGT+AGG | + | chr4.3:88193350-88193369 | MS.gene65399:intron | 20.0% |
| !!! | GGTTTTTTATATAAGCAAAA+AGG | - | chr4.3:88192066-88192085 | None:intergenic | 20.0% |
| !!! | GTTAGTTGATAACTAAATTA+TGG | - | chr4.3:88190586-88190605 | None:intergenic | 20.0% |
| !!! | TAATAGTTCAGTTTAGTTTT+CGG | + | chr4.3:88191573-88191592 | MS.gene65399:intron | 20.0% |
| !!! | TTCACATTTTCATCTAATAT+GGG | - | chr4.3:88191638-88191657 | None:intergenic | 20.0% |
| !!! | TTTTGCTTATATAAAAAACC+AGG | + | chr4.3:88192066-88192085 | MS.gene65399:intron | 20.0% |
| !!! | TTTTTTCATTTTATGAATGC+AGG | + | chr4.3:88192376-88192395 | MS.gene65399:intron | 20.0% |
| ! | AAATTGAACCAAATCGTTAA+TGG | + | chr4.3:88191373-88191392 | MS.gene65399:intron | 25.0% |
| ! | AATAAAAAAAATTGCACAGG+AGG | - | chr4.3:88190820-88190839 | None:intergenic | 25.0% |
| ! | AGAAAAAGTGATATCAAATG+TGG | + | chr4.3:88193422-88193441 | MS.gene65399:CDS | 25.0% |
| ! | ATCCTCATTATTACACTAAT+AGG | - | chr4.3:88191301-88191320 | None:intergenic | 25.0% |
| ! | ATTAATATGACATTTATCCC+TGG | + | chr4.3:88189729-88189748 | MS.gene65399:intron | 25.0% |
| ! | CAATTTCTTCTACATACTTA+TGG | - | chr4.3:88191230-88191249 | None:intergenic | 25.0% |
| ! | CATGAATATGAATACTTCTT+TGG | - | chr4.3:88193069-88193088 | None:intergenic | 25.0% |
| ! | CGTAAACATCATAAATAGAA+TGG | + | chr4.3:88191141-88191160 | MS.gene65399:intron | 25.0% |
| ! | GTTATATATGTTTACATTGC+AGG | + | chr4.3:88192685-88192704 | MS.gene65399:intron | 25.0% |
| ! | TAAAATATGGTTCCAAGTTA+TGG | - | chr4.3:88190918-88190937 | None:intergenic | 25.0% |
| ! | TATGATGAAAACCATAAACA+TGG | - | chr4.3:88192569-88192588 | None:intergenic | 25.0% |
| ! | TATTCATGCATACATATGAA+TGG | + | chr4.3:88193081-88193100 | MS.gene65399:CDS | 25.0% |
| ! | TCTTACTCACATTTATTACT+AGG | - | chr4.3:88191612-88191631 | None:intergenic | 25.0% |
| ! | TTAAATTGATCACTCATTGT+GGG | + | chr4.3:88189386-88189405 | MS.gene65399:intron | 25.0% |
| ! | TTAATATGACATTTATCCCT+GGG | + | chr4.3:88189730-88189749 | MS.gene65399:intron | 25.0% |
| ! | TTAATGTAATCACATATCAC+CGG | - | chr4.3:88192825-88192844 | None:intergenic | 25.0% |
| !! | AAGATTAATAGGAAGTACAA+TGG | + | chr4.3:88190497-88190516 | MS.gene65399:intron | 25.0% |
| !! | ATTCTGTTTTCAATTGTTGA+TGG | + | chr4.3:88191274-88191293 | MS.gene65399:intron | 25.0% |
| !! | CGTAAATTAGTAACTAGTTT+AGG | - | chr4.3:88190275-88190294 | None:intergenic | 25.0% |
| !! | GACAATGTAAATTTTGCTTT+AGG | - | chr4.3:88189499-88189518 | None:intergenic | 25.0% |
| !! | GGTTTTCATCATAGTAAATA+GGG | + | chr4.3:88192576-88192595 | MS.gene65399:intron | 25.0% |
| !! | GTTTTCTCTAAATATAGTTC+TGG | - | chr4.3:88191410-88191429 | None:intergenic | 25.0% |
| !! | TGGTTTTCATCATAGTAAAT+AGG | + | chr4.3:88192575-88192594 | MS.gene65399:intron | 25.0% |
| !! | TTCTGTTTTCAATTGTTGAT+GGG | + | chr4.3:88191275-88191294 | MS.gene65399:intron | 25.0% |
| !! | TTGATAACTGTTACAAATCA+TGG | - | chr4.3:88189759-88189778 | None:intergenic | 25.0% |
| !! | TTGATTTTGCTTGATGTTTA+TGG | + | chr4.3:88191801-88191820 | MS.gene65399:intron | 25.0% |
| !!! | AATAGTTCAGTTTAGTTTTC+GGG | + | chr4.3:88191574-88191593 | MS.gene65399:intron | 25.0% |
| !!! | AATGTAAATTTTGCTTTAGG+TGG | - | chr4.3:88189496-88189515 | None:intergenic | 25.0% |
| !!! | ACATTTGATATCACTTTTTC+TGG | - | chr4.3:88193423-88193442 | None:intergenic | 25.0% |
| !!! | AGTTTTGATTTGAATAGTGA+TGG | + | chr4.3:88192737-88192756 | MS.gene65399:CDS | 25.0% |
| !!! | AGTTTTGGTCACTTAAATTT+AGG | - | chr4.3:88193238-88193257 | None:intergenic | 25.0% |
| !!! | ATGCAAACTTTTAAGAAGAA+AGG | - | chr4.3:88189071-88189090 | None:intergenic | 25.0% |
| !!! | CACTAGGTTTTAATAAGTTA+TGG | - | chr4.3:88190058-88190077 | None:intergenic | 25.0% |
| !!! | CTATATGGTATATCACTTTT+AGG | - | chr4.3:88193278-88193297 | None:intergenic | 25.0% |
| !!! | CTGTAACAAACTCTAAAATA+TGG | - | chr4.3:88190931-88190950 | None:intergenic | 25.0% |
| !!! | GTTTTGGTCACTTAAATTTA+GGG | - | chr4.3:88193237-88193256 | None:intergenic | 25.0% |
| !!! | TGAATTGAATTTGGCTTTTA+TGG | + | chr4.3:88191171-88191190 | MS.gene65399:intron | 25.0% |
| AAACAAGTCTTGAACTCATT+TGG | + | chr4.3:88188960-88188979 | MS.gene65399:intron | 30.0% | |
| AAATCAAGTCAAACCTTGTT+AGG | - | chr4.3:88191788-88191807 | None:intergenic | 30.0% | |
| AATCAAGTCAAACCTTGTTA+GGG | - | chr4.3:88191787-88191806 | None:intergenic | 30.0% | |
| AATGAGGATTGTTCATGATT+CGG | + | chr4.3:88191312-88191331 | MS.gene65399:intron | 30.0% | |
| AATGCAGCATATAAAGAAGA+AGG | + | chr4.3:88192997-88193016 | MS.gene65399:CDS | 30.0% | |
| AATGCATCAGACTCAATTAA+GGG | + | chr4.3:88193027-88193046 | MS.gene65399:CDS | 30.0% | |
| ACTTTACTATGAGTCTCTAT+GGG | + | chr4.3:88189663-88189682 | MS.gene65399:intron | 30.0% | |
| AGAAGTTCATGTATTCTGTT+TGG | + | chr4.3:88192466-88192485 | MS.gene65399:CDS | 30.0% | |
| AGTTAGAAGTGGAAAGATTA+AGG | + | chr4.3:88193497-88193516 | MS.gene65399:CDS | 30.0% | |
| ATATCAAATGTGGCTGATTA+TGG | + | chr4.3:88193432-88193451 | MS.gene65399:CDS | 30.0% | |
| ATGCAGCATATAAAGAAGAA+GGG | + | chr4.3:88192998-88193017 | MS.gene65399:CDS | 30.0% | |
| ATTTAACATAATAGTCGCCT+TGG | - | chr4.3:88190753-88190772 | None:intergenic | 30.0% | |
| ATTTGATTAGGGAAAAAGGT+TGG | + | chr4.3:88193304-88193323 | MS.gene65399:intron | 30.0% | |
| CAATGGTGAGAGTTATTTAT+AGG | + | chr4.3:88190514-88190533 | MS.gene65399:intron | 30.0% | |
| CATGTAAATGAAATTGTGGT+TGG | + | chr4.3:88190655-88190674 | MS.gene65399:intron | 30.0% | |
| CCAAAGAATTATTGATGTAG+TGG | + | chr4.3:88193377-88193396 | MS.gene65399:CDS | 30.0% | |
| CCACTACATCAATAATTCTT+TGG | - | chr4.3:88193380-88193399 | None:intergenic | 30.0% | |
| CCTCAAAAACCTTAATATTG+AGG | + | chr4.3:88190694-88190713 | MS.gene65399:intron | 30.0% | |
| CTGAAATGATTCTATGTGAA+CGG | + | chr4.3:88191455-88191474 | MS.gene65399:intron | 30.0% | |
| GAATATGAATACTTCTTTGG+AGG | - | chr4.3:88193066-88193085 | None:intergenic | 30.0% | |
| GAGATAAAAATTCGTCTCAT+AGG | + | chr4.3:88189817-88189836 | MS.gene65399:intron | 30.0% | |
| GATGCATGTAAATGAAATTG+TGG | + | chr4.3:88190651-88190670 | MS.gene65399:intron | 30.0% | |
| GTCTTCTGAATTGTGTAAAA+TGG | + | chr4.3:88189036-88189055 | MS.gene65399:intron | 30.0% | |
| GTTAAATTGATCACTCATTG+TGG | + | chr4.3:88189385-88189404 | MS.gene65399:intron | 30.0% | |
| TAATGCATCAGACTCAATTA+AGG | + | chr4.3:88193026-88193045 | MS.gene65399:CDS | 30.0% | |
| TCATTAGTAATCTCAAGAGT+TGG | - | chr4.3:88191018-88191037 | None:intergenic | 30.0% | |
| TCTACATACTTATGGAAACA+TGG | - | chr4.3:88191222-88191241 | None:intergenic | 30.0% | |
| TGTTATAAGATGTAAGGTGT+GGG | + | chr4.3:88189925-88189944 | MS.gene65399:intron | 30.0% | |
| TTAGATGAATCAGTTAGAAG+TGG | + | chr4.3:88193486-88193505 | MS.gene65399:CDS | 30.0% | |
| TTGTTATAAGATGTAAGGTG+TGG | + | chr4.3:88189924-88189943 | MS.gene65399:intron | 30.0% | |
| TTTCAGATTTCAAAACAGCT+TGG | + | chr4.3:88192203-88192222 | MS.gene65399:intron | 30.0% | |
| ! | ACTAAAGCAAACAAGTTTTG+AGG | + | chr4.3:88190170-88190189 | MS.gene65399:intron | 30.0% |
| ! | ATATAAGCAAAAAGGTGCAT+TGG | - | chr4.3:88192058-88192077 | None:intergenic | 30.0% |
| ! | CCTCAATATTAAGGTTTTTG+AGG | - | chr4.3:88190697-88190716 | None:intergenic | 30.0% |
| ! | CTAAATTATGGTTAGTTGGT+AGG | - | chr4.3:88190574-88190593 | None:intergenic | 30.0% |
| ! | TAAGGTTTCAGGTAAAAATG+TGG | + | chr4.3:88191704-88191723 | MS.gene65399:intron | 30.0% |
| ! | TAGTTGATACTTCTGATGAA+TGG | + | chr4.3:88191052-88191071 | MS.gene65399:CDS | 30.0% |
| ! | TCTACTTCAGATGATCTTTT+TGG | + | chr4.3:88191931-88191950 | MS.gene65399:CDS | 30.0% |
| !! | AATTTGCCTTTTTGTTTGGT+AGG | + | chr4.3:88190341-88190360 | MS.gene65399:intron | 30.0% |
| !! | ACTTTTAAGAAGAAAGGTCA+AGG | - | chr4.3:88189065-88189084 | None:intergenic | 30.0% |
| !! | AGAAATTCTAAGACATACCT+TGG | + | chr4.3:88190117-88190136 | MS.gene65399:intron | 30.0% |
| !! | CTAAATATAGTTCTGGTTCA+GGG | - | chr4.3:88191403-88191422 | None:intergenic | 30.0% |
| !! | GACTAATTTGCCTTTTTGTT+TGG | + | chr4.3:88190337-88190356 | MS.gene65399:intron | 30.0% |
| !! | TCTAAATATAGTTCTGGTTC+AGG | - | chr4.3:88191404-88191423 | None:intergenic | 30.0% |
| !!! | TTGATATCACTTTTTCTGGA+GGG | - | chr4.3:88193419-88193438 | None:intergenic | 30.0% |
| !!! | TTTGATATCACTTTTTCTGG+AGG | - | chr4.3:88193420-88193439 | None:intergenic | 30.0% |
| !!! | TTTTTTACATTGTCCCAAGT+CGG | + | chr4.3:88189564-88189583 | MS.gene65399:intron | 30.0% |
| AAAAAAATTGCACAGGAGGA+AGG | - | chr4.3:88190816-88190835 | None:intergenic | 35.0% | |
| AAAATAGACAAAATGCTCCG+AGG | + | chr4.3:88189179-88189198 | MS.gene65399:intron | 35.0% | |
| AATTGAGTCAGCACTTCAAA+AGG | + | chr4.3:88193146-88193165 | MS.gene65399:CDS | 35.0% | |
| ACACCAAAGAATCATAACTC+TGG | - | chr4.3:88191749-88191768 | None:intergenic | 35.0% | |
| ACCAAACCATTGTAACAGTT+CGG | - | chr4.3:88191352-88191371 | None:intergenic | 35.0% | |
| ACCAAAGAATCATAACTCTG+GGG | - | chr4.3:88191747-88191766 | None:intergenic | 35.0% | |
| ACCATAGTTTCACTTCATGT+AGG | + | chr4.3:88192968-88192987 | MS.gene65399:intron | 35.0% | |
| ACTGTACCTACCAAACAAAA+AGG | - | chr4.3:88190350-88190369 | None:intergenic | 35.0% | |
| AGAAAACCGAACTGTTACAA+TGG | + | chr4.3:88191343-88191362 | MS.gene65399:intron | 35.0% | |
| AGAAGTGGAAAGATTAAGGA+AGG | + | chr4.3:88193501-88193520 | MS.gene65399:CDS | 35.0% | |
| ATAGAGAGAAAACTCATTCG+AGG | + | chr4.3:88189853-88189872 | MS.gene65399:intron | 35.0% | |
| ATGAGGTGTAAAAGATAGAG+AGG | + | chr4.3:88189445-88189464 | MS.gene65399:intron | 35.0% | |
| CAAATGCGACCTCAATATTA+AGG | - | chr4.3:88190706-88190725 | None:intergenic | 35.0% | |
| CACCAAAGAATCATAACTCT+GGG | - | chr4.3:88191748-88191767 | None:intergenic | 35.0% | |
| CACTTTACTATGAGTCTCTA+TGG | + | chr4.3:88189662-88189681 | MS.gene65399:intron | 35.0% | |
| CAGAATACATGAACTTCTGT+CGG | - | chr4.3:88192464-88192483 | None:intergenic | 35.0% | |
| CCAATGTCTTATAAGGTTTC+AGG | + | chr4.3:88191693-88191712 | MS.gene65399:intron | 35.0% | |
| CCTGAAACCTTATAAGACAT+TGG | - | chr4.3:88191696-88191715 | None:intergenic | 35.0% | |
| CTAATTTACGTTGAGTCTCA+AGG | + | chr4.3:88190285-88190304 | MS.gene65399:intron | 35.0% | |
| CTATAACCAATACTAACCTG+AGG | - | chr4.3:88191964-88191983 | None:intergenic | 35.0% | |
| CTCTTTCGAGATATATCGAT+TGG | + | chr4.3:88192437-88192456 | MS.gene65399:CDS | 35.0% | |
| GGCCTATTAGTGTAATAATG+AGG | + | chr4.3:88191296-88191315 | MS.gene65399:intron | 35.0% | |
| GGCTAACTATACCATGTTTA+TGG | + | chr4.3:88192555-88192574 | MS.gene65399:intron | 35.0% | |
| GGTTACAGCTGAATTGAATT+TGG | + | chr4.3:88191162-88191181 | MS.gene65399:intron | 35.0% | |
| TAGAAATGTCGATACTGCAA+AGG | - | chr4.3:88192789-88192808 | None:intergenic | 35.0% | |
| TAGATGAACACACCAAGATT+AGG | - | chr4.3:88191915-88191934 | None:intergenic | 35.0% | |
| TGCAGCATATAAAGAAGAAG+GGG | + | chr4.3:88192999-88193018 | MS.gene65399:CDS | 35.0% | |
| TTAAAATCAGGGCCATAACT+TGG | + | chr4.3:88190903-88190922 | MS.gene65399:intron | 35.0% | |
| TTACAAATCATGGAATCCCA+GGG | - | chr4.3:88189749-88189768 | None:intergenic | 35.0% | |
| TTGATCAGTTCGTGAACTAT+CGG | + | chr4.3:88191514-88191533 | MS.gene65399:intron | 35.0% | |
| ! | AACAGTTCGGTTTTCTTTCT+TGG | - | chr4.3:88191339-88191358 | None:intergenic | 35.0% |
| ! | ACTGATTCATCTAAAGCCAA+TGG | - | chr4.3:88193480-88193499 | None:intergenic | 35.0% |
| ! | GATTTGAATAGTGATGGTGA+TGG | + | chr4.3:88192743-88192762 | MS.gene65399:CDS | 35.0% |
| ! | GTATCGACATTTCTAATCGA+AGG | + | chr4.3:88192794-88192813 | MS.gene65399:intron | 35.0% |
| ! | TTCATCTAAAGCCAATGGAA+TGG | - | chr4.3:88193475-88193494 | None:intergenic | 35.0% |
| ! | TTGACGACAATTTAAAGCCA+AGG | + | chr4.3:88190733-88190752 | MS.gene65399:intron | 35.0% |
| ! | TTTTGCATCCAAGAGCAAAA+TGG | + | chr4.3:88188930-88188949 | MS.gene65399:CDS | 35.0% |
| ! | TTTTTACATTGTCCCAAGTC+GGG | + | chr4.3:88189565-88189584 | MS.gene65399:intron | 35.0% |
| !! | AAGCACTGACACATATACAT+TGG | - | chr4.3:88192901-88192920 | None:intergenic | 35.0% |
| !! | ACTTTTGTTTGTCAACACTG+AGG | - | chr4.3:88192535-88192554 | None:intergenic | 35.0% |
| !! | CTCAGGTTAGTATTGGTTAT+AGG | + | chr4.3:88191962-88191981 | MS.gene65399:intron | 35.0% |
| !! | GCATGTAGTGGATTTATCTT+TGG | + | chr4.3:88192263-88192282 | MS.gene65399:CDS | 35.0% |
| !! | GTGTGGGTTGATTACATATT+AGG | + | chr4.3:88189941-88189960 | MS.gene65399:intron | 35.0% |
| !! | TCAGTGTTGACAAACAAAAG+TGG | + | chr4.3:88192534-88192553 | MS.gene65399:intron | 35.0% |
| !! | TTATGGTTAGTTGGTAGGTT+AGG | - | chr4.3:88190569-88190588 | None:intergenic | 35.0% |
| !!! | ACAAGTTTTGAGGAAATGGA+AGG | + | chr4.3:88190180-88190199 | MS.gene65399:intron | 35.0% |
| !!! | GCAAACAAGTTTTGAGGAAA+TGG | + | chr4.3:88190176-88190195 | MS.gene65399:intron | 35.0% |
| !!! | GGATCAGCTATTTTTCAATG+GGG | + | chr4.3:88193567-88193586 | MS.gene65399:CDS | 35.0% |
| !!! | GGGATCAGCTATTTTTCAAT+GGG | + | chr4.3:88193566-88193585 | MS.gene65399:CDS | 35.0% |
| !!! | TATTTTTGGTCCTTACCTGA+TGG | - | chr4.3:88193209-88193228 | None:intergenic | 35.0% |
| !!! | TGAATTTGGCTTTTATGGAG+TGG | + | chr4.3:88191176-88191195 | MS.gene65399:intron | 35.0% |
| AACATTACAGCTGCATGTAG+TGG | + | chr4.3:88192251-88192270 | MS.gene65399:CDS | 40.0% | |
| AAGATTAGGTCAACATCACC+TGG | - | chr4.3:88191901-88191920 | None:intergenic | 40.0% | |
| ACCGAACTGTTACAATGGTT+TGG | + | chr4.3:88191348-88191367 | MS.gene65399:intron | 40.0% | |
| AGGAAATGGAAGGTGATAAG+AGG | + | chr4.3:88190190-88190209 | MS.gene65399:intron | 40.0% | |
| AGGCGCAAAACAACTATGTT+TGG | - | chr4.3:88188992-88189011 | None:intergenic | 40.0% | |
| AGGTGATGTTGACCTAATCT+TGG | + | chr4.3:88191900-88191919 | MS.gene65399:CDS | 40.0% | |
| AGTTTCTCTCTTCCCTAACA+AGG | + | chr4.3:88191772-88191791 | MS.gene65399:intron | 40.0% | |
| AGTTTCTGCAATGTACTTCC+TGG | - | chr4.3:88192087-88192106 | None:intergenic | 40.0% | |
| ATCAGCTGCTAGTCACATTA+GGG | + | chr4.3:88192292-88192311 | MS.gene65399:CDS | 40.0% | |
| ATGTCGATACTGCAAAGGTA+AGG | - | chr4.3:88192784-88192803 | None:intergenic | 40.0% | |
| CAATCACAATCGTCATCACT+AGG | - | chr4.3:88189978-88189997 | None:intergenic | 40.0% | |
| CTTGACCACTTTATCAGTAG+AGG | + | chr4.3:88191840-88191859 | MS.gene65399:CDS | 40.0% | |
| GAAATGGAAGGTGATAAGAG+GGG | + | chr4.3:88190192-88190211 | MS.gene65399:intron | 40.0% | |
| GATACATTGACCATGGAAGT+TGG | + | chr4.3:88190238-88190257 | MS.gene65399:intron | 40.0% | |
| GCCTACATGAAGTGAAACTA+TGG | - | chr4.3:88192972-88192991 | None:intergenic | 40.0% | |
| GCTGTAATGTTATAAGCTGC+TGG | - | chr4.3:88192242-88192261 | None:intergenic | 40.0% | |
| GGAAATGGAAGGTGATAAGA+GGG | + | chr4.3:88190191-88190210 | MS.gene65399:intron | 40.0% | |
| GGCGCAAAACAACTATGTTT+GGG | - | chr4.3:88188991-88189010 | None:intergenic | 40.0% | |
| GTGAACTATCGGTCATAGTT+CGG | + | chr4.3:88191525-88191544 | MS.gene65399:intron | 40.0% | |
| GTGGTTAGATGTACCTAGTT+GGG | - | chr4.3:88189477-88189496 | None:intergenic | 40.0% | |
| GTGTAAAATGGCAACAACAC+TGG | + | chr4.3:88189014-88189033 | MS.gene65399:intron | 40.0% | |
| GTTACAAATCATGGAATCCC+AGG | - | chr4.3:88189750-88189769 | None:intergenic | 40.0% | |
| TATCAGCTGCTAGTCACATT+AGG | + | chr4.3:88192291-88192310 | MS.gene65399:CDS | 40.0% | |
| TGCTTGATGTTTATGGTTGC+AGG | + | chr4.3:88191808-88191827 | MS.gene65399:intron | 40.0% | |
| TTCCATAACCAGACAATCCT+CGG | - | chr4.3:88189199-88189218 | None:intergenic | 40.0% | |
| TTGATGTTTATGGTTGCAGG+TGG | + | chr4.3:88191811-88191830 | MS.gene65399:intron | 40.0% | |
| TTGTTTGTCAACACTGAGGA+AGG | - | chr4.3:88192531-88192550 | None:intergenic | 40.0% | |
| ! | GAAGTATCTACCAACTTCCA+TGG | - | chr4.3:88190251-88190270 | None:intergenic | 40.0% |
| ! | GGACAAATTATTGCTGCTTC+TGG | + | chr4.3:88193522-88193541 | MS.gene65399:CDS | 40.0% |
| ! | GTTGGTAGATACATTGACCA+TGG | + | chr4.3:88190231-88190250 | MS.gene65399:intron | 40.0% |
| ! | TCTAAGACATACCTTGGCAA+AGG | + | chr4.3:88190123-88190142 | MS.gene65399:intron | 40.0% |
| ! | TTTTGCGCCTAGGTGTAAAA+TGG | + | chr4.3:88189002-88189021 | MS.gene65399:intron | 40.0% |
| !! | AACATAGTTGTTTTGCGCCT+AGG | + | chr4.3:88188992-88189011 | MS.gene65399:intron | 40.0% |
| !! | AGTGCAGAAGAGTATTCATG+TGG | - | chr4.3:88189695-88189714 | None:intergenic | 40.0% |
| !! | AGTGCTGACTCAATTGACTT+TGG | - | chr4.3:88193141-88193160 | None:intergenic | 40.0% |
| !! | ATTATTGCTGCTTCTGGCTT+TGG | + | chr4.3:88193528-88193547 | MS.gene65399:CDS | 40.0% |
| !! | CTTTGCAGACTTGTTAGTCA+AGG | + | chr4.3:88190961-88190980 | MS.gene65399:intron | 40.0% |
| !! | GTGCAGAAGAGTATTCATGT+GGG | - | chr4.3:88189694-88189713 | None:intergenic | 40.0% |
| !! | TCAGATGATCTTTTTGGCAC+TGG | + | chr4.3:88191937-88191956 | MS.gene65399:CDS | 40.0% |
| !!! | GGGGATCAGCTATTTTTCAA+TGG | + | chr4.3:88193565-88193584 | MS.gene65399:CDS | 40.0% |
| !!! | GTTGTTGCCATTTTACACCT+AGG | - | chr4.3:88189012-88189031 | None:intergenic | 40.0% |
| AAAATGCTCCGAGGATTGTC+TGG | + | chr4.3:88189188-88189207 | MS.gene65399:intron | 45.0% | |
| AACTCGACGTTTACGAATCC+CGG | - | chr4.3:88191091-88191110 | None:intergenic | 45.0% | |
| AAGACATACCTTGGCAAAGG+AGG | + | chr4.3:88190126-88190145 | MS.gene65399:intron | 45.0% | |
| AAGTGCAGCTTCCATTCCAT+TGG | + | chr4.3:88193461-88193480 | MS.gene65399:CDS | 45.0% | |
| AATGGATAAGTGTTCGCACC+GGG | + | chr4.3:88191070-88191089 | MS.gene65399:CDS | 45.0% | |
| ACTGGTCCTCAGGTTAGTAT+TGG | + | chr4.3:88191955-88191974 | MS.gene65399:intron | 45.0% | |
| AGCAAGGAAAGCTCTTGAGA+TGG | + | chr4.3:88191864-88191883 | MS.gene65399:CDS | 45.0% | |
| AGGGTCAGCCATTAACGATT+TGG | - | chr4.3:88191384-88191403 | None:intergenic | 45.0% | |
| ATACCTTGGCAAAGGAGGTT+GGG | + | chr4.3:88190131-88190150 | MS.gene65399:intron | 45.0% | |
| ATTCTGTTTGGAGATGCTGC+TGG | + | chr4.3:88192478-88192497 | MS.gene65399:CDS | 45.0% | |
| CGCTGCAACGTAATTCTAAG+AGG | + | chr4.3:88190310-88190329 | MS.gene65399:intron | 45.0% | |
| CGTAAACGTCGAGTTCTTTC+AGG | + | chr4.3:88191096-88191115 | MS.gene65399:CDS | 45.0% | |
| CTTTATCAGTAGAGGCAGCA+AGG | + | chr4.3:88191848-88191867 | MS.gene65399:CDS | 45.0% | |
| GAAAGCTCTTGAGATGGCAA+AGG | + | chr4.3:88191870-88191889 | MS.gene65399:CDS | 45.0% | |
| GAATGGATAAGTGTTCGCAC+CGG | + | chr4.3:88191069-88191088 | MS.gene65399:CDS | 45.0% | |
| GAGAAGTAACCAGTCAATGC+TGG | - | chr4.3:88193187-88193206 | None:intergenic | 45.0% | |
| GCCCCAGAGTTATGATTCTT+TGG | + | chr4.3:88191743-88191762 | MS.gene65399:intron | 45.0% | |
| GGAAGATGAAGGAGTGAAGT+TGG | + | chr4.3:88190213-88190232 | MS.gene65399:intron | 45.0% | |
| GGTGGTTAGATGTACCTAGT+TGG | - | chr4.3:88189478-88189497 | None:intergenic | 45.0% | |
| GGTTACTTCTCCATCAGGTA+AGG | + | chr4.3:88193196-88193215 | MS.gene65399:intron | 45.0% | |
| GTGATAAGAGGGGAAGATGA+AGG | + | chr4.3:88190202-88190221 | MS.gene65399:intron | 45.0% | |
| GTGGCAATGTAAATGGCTTC+TGG | + | chr4.3:88188894-88188913 | MS.gene65399:CDS | 45.0% | |
| TCAGCTGCTAGTCACATTAG+GGG | + | chr4.3:88192293-88192312 | MS.gene65399:CDS | 45.0% | |
| TGACTTTGGCACACTCTGTA+TGG | - | chr4.3:88193127-88193146 | None:intergenic | 45.0% | |
| TGCTGCCTCTACTGATAAAG+TGG | - | chr4.3:88191848-88191867 | None:intergenic | 45.0% | |
| ! | TGACTGGTTACTTCTCCATC+AGG | + | chr4.3:88193191-88193210 | MS.gene65399:CDS | 45.0% |
| ! | TGCTGCTACCATTTTGCTCT+TGG | - | chr4.3:88188941-88188960 | None:intergenic | 45.0% |
| ! | TTTCTAATCGAAGGCGTGTC+CGG | + | chr4.3:88192803-88192822 | MS.gene65399:intron | 45.0% |
| !! | AGTTGGTAGGTTAGGTGGTT+AGG | - | chr4.3:88190561-88190580 | None:intergenic | 45.0% |
| !! | CTCTTTCGTGCGATTTGGTT+CGG | + | chr4.3:88191548-88191567 | MS.gene65399:intron | 45.0% |
| !! | CTTTGGTGCTGGTCTTACTT+GGG | + | chr4.3:88193545-88193564 | MS.gene65399:CDS | 45.0% |
| !! | TGGTTAGTTGGTAGGTTAGG+TGG | - | chr4.3:88190566-88190585 | None:intergenic | 45.0% |
| !! | TTTGGTGCTGGTCTTACTTG+GGG | + | chr4.3:88193546-88193565 | MS.gene65399:CDS | 45.0% |
| !! | ATTAAAAAAAATTAAAATCA+GGG | + | chr4.3:88190892-88190911 | MS.gene65399:intron | 5.0% |
| AAATTTGTCCGGTCCCGACT+TGG | - | chr4.3:88189581-88189600 | None:intergenic | 50.0% | |
| AACCAGTCAATGCTGGATGC+AGG | - | chr4.3:88193180-88193199 | None:intergenic | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | - | chr4.3:88189580-88189599 | None:intergenic | 50.0% | |
| AGAGAGGAGACATCCCAACT+AGG | + | chr4.3:88189461-88189480 | MS.gene65399:intron | 50.0% | |
| ATTCCCAACCTCCTTTGCCA+AGG | - | chr4.3:88190137-88190156 | None:intergenic | 50.0% | |
| CATACCTTGGCAAAGGAGGT+TGG | + | chr4.3:88190130-88190149 | MS.gene65399:intron | 50.0% | |
| CTCCGAGGATTGTCTGGTTA+TGG | + | chr4.3:88189194-88189213 | MS.gene65399:intron | 50.0% | |
| GAGTCAGCACTTCAAAAGGC+TGG | + | chr4.3:88193150-88193169 | MS.gene65399:CDS | 50.0% | |
| GCAAAGGAGGTTGGGAATCA+TGG | + | chr4.3:88190139-88190158 | MS.gene65399:intron | 50.0% | |
| TGTTAGTCAAGGCTGCAAGC+TGG | + | chr4.3:88190972-88190991 | MS.gene65399:CDS | 50.0% | |
| TTCGGCTCTTTCGTGCGATT+TGG | + | chr4.3:88191543-88191562 | MS.gene65399:intron | 50.0% | |
| ! | GAGATGGCAAAGGTTGATCC+AGG | + | chr4.3:88191880-88191899 | MS.gene65399:CDS | 50.0% |
| !! | GCTTTGGTGCTGGTCTTACT+TGG | + | chr4.3:88193544-88193563 | MS.gene65399:CDS | 50.0% |
| !! | TACCTGCATCCAGCATTGAC+TGG | + | chr4.3:88193175-88193194 | MS.gene65399:CDS | 50.0% |
| !! | TGCTGGTGCTGTTCTAGTAC+AGG | + | chr4.3:88192495-88192514 | MS.gene65399:CDS | 50.0% |
| !!! | TCTTTTTGGCACTGGTCCTC+AGG | + | chr4.3:88191945-88191964 | MS.gene65399:CDS | 50.0% |
| ACATTGTCCCAAGTCGGGAC+CGG | + | chr4.3:88189570-88189589 | MS.gene65399:intron | 55.0% | |
| AGTCAAGGCTGCAAGCTGGT+AGG | + | chr4.3:88190976-88190995 | MS.gene65399:CDS | 55.0% | |
| ATTGCAGGCGTGCAACTACG+AGG | + | chr4.3:88192700-88192719 | MS.gene65399:intron | 55.0% | |
| TTGCACAGGAGGAAGGCAAG+CGG | - | chr4.3:88190809-88190828 | None:intergenic | 55.0% | |
| GGCTGCAAGCTGGTAGGATG+TGG | + | chr4.3:88190982-88191001 | MS.gene65399:CDS | 60.0% | |
| TGCACAGGAGGAAGGCAAGC+GGG | - | chr4.3:88190808-88190827 | None:intergenic | 60.0% | |
| !! | GCTGCTTCTGGCTTTGGTGC+TGG | + | chr4.3:88193534-88193553 | MS.gene65399:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 88188889 | 88193593 | 88188889 | ID=MS.gene65399 |
| chr4.3 | mRNA | 88188889 | 88193593 | 88188889 | ID=MS.gene65399.t1;Parent=MS.gene65399 |
| chr4.3 | exon | 88188889 | 88188965 | 88188889 | ID=MS.gene65399.t1.exon1;Parent=MS.gene65399.t1 |
| chr4.3 | CDS | 88188889 | 88188965 | 88188889 | ID=cds.MS.gene65399.t1;Parent=MS.gene65399.t1 |
| chr4.3 | exon | 88190969 | 88191117 | 88190969 | ID=MS.gene65399.t1.exon2;Parent=MS.gene65399.t1 |
| chr4.3 | CDS | 88190969 | 88191117 | 88190969 | ID=cds.MS.gene65399.t1;Parent=MS.gene65399.t1 |
| chr4.3 | exon | 88191830 | 88191966 | 88191830 | ID=MS.gene65399.t1.exon3;Parent=MS.gene65399.t1 |
| chr4.3 | CDS | 88191830 | 88191966 | 88191830 | ID=cds.MS.gene65399.t1;Parent=MS.gene65399.t1 |
| chr4.3 | exon | 88192209 | 88192314 | 88192209 | ID=MS.gene65399.t1.exon4;Parent=MS.gene65399.t1 |
| chr4.3 | CDS | 88192209 | 88192314 | 88192209 | ID=cds.MS.gene65399.t1;Parent=MS.gene65399.t1 |
| chr4.3 | exon | 88192398 | 88192516 | 88192398 | ID=MS.gene65399.t1.exon5;Parent=MS.gene65399.t1 |
| chr4.3 | CDS | 88192398 | 88192516 | 88192398 | ID=cds.MS.gene65399.t1;Parent=MS.gene65399.t1 |
| chr4.3 | exon | 88192707 | 88192771 | 88192707 | ID=MS.gene65399.t1.exon6;Parent=MS.gene65399.t1 |
| chr4.3 | CDS | 88192707 | 88192771 | 88192707 | ID=cds.MS.gene65399.t1;Parent=MS.gene65399.t1 |
| chr4.3 | exon | 88192990 | 88193212 | 88192990 | ID=MS.gene65399.t1.exon7;Parent=MS.gene65399.t1 |
| chr4.3 | CDS | 88192990 | 88193212 | 88192990 | ID=cds.MS.gene65399.t1;Parent=MS.gene65399.t1 |
| chr4.3 | exon | 88193372 | 88193593 | 88193372 | ID=MS.gene65399.t1.exon8;Parent=MS.gene65399.t1 |
| chr4.3 | CDS | 88193372 | 88193593 | 88193372 | ID=cds.MS.gene65399.t1;Parent=MS.gene65399.t1 |
| Gene Sequence |
| Protein sequence |
