Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66639.t1 | XP_003605992.2 | 81.4 | 500 | 8 | 3 | 1 | 415 | 500 | 999 | 3.90E-220 | 773.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66639.t1 | Q9SHS7 | 76.4 | 504 | 30 | 4 | 1 | 415 | 503 | 1006 | 2.4e-210 | 732.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66639.t1 | G7JET4 | 81.4 | 500 | 8 | 3 | 1 | 415 | 500 | 999 | 2.8e-220 | 773.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049283 | MS.gene66639 | 0.845518 | 3.86E-59 | -1.69E-46 |
MS.gene049499 | MS.gene66639 | 0.811686 | 6.18E-51 | -1.69E-46 |
MS.gene049983 | MS.gene66639 | 0.852674 | 3.95E-61 | -1.69E-46 |
MS.gene050414 | MS.gene66639 | 0.80799 | 3.86E-50 | -1.69E-46 |
MS.gene050646 | MS.gene66639 | 0.824327 | 8.57E-54 | -1.69E-46 |
MS.gene050654 | MS.gene66639 | 0.848194 | 7.16E-60 | -1.69E-46 |
MS.gene050941 | MS.gene66639 | 0.826767 | 2.26E-54 | -1.69E-46 |
MS.gene051003 | MS.gene66639 | 0.814889 | 1.22E-51 | -1.69E-46 |
MS.gene051184 | MS.gene66639 | 0.812233 | 4.70E-51 | -1.69E-46 |
MS.gene052072 | MS.gene66639 | 0.809986 | 1.44E-50 | -1.69E-46 |
MS.gene052307 | MS.gene66639 | 0.825077 | 5.71E-54 | -1.69E-46 |
MS.gene052463 | MS.gene66639 | 0.814838 | 1.26E-51 | -1.69E-46 |
MS.gene053058 | MS.gene66639 | 0.81397 | 1.95E-51 | -1.69E-46 |
MS.gene053456 | MS.gene66639 | 0.802935 | 4.43E-49 | -1.69E-46 |
MS.gene053726 | MS.gene66639 | 0.841502 | 4.57E-58 | -1.69E-46 |
MS.gene054479 | MS.gene66639 | 0.811187 | 7.94E-51 | -1.69E-46 |
MS.gene055513 | MS.gene66639 | 0.808042 | 3.76E-50 | -1.69E-46 |
MS.gene055841 | MS.gene66639 | 0.801551 | 8.54E-49 | -1.69E-46 |
MS.gene055864 | MS.gene66639 | 0.802248 | 6.14E-49 | -1.69E-46 |
MS.gene056045 | MS.gene66639 | 0.820136 | 8.05E-53 | -1.69E-46 |
MS.gene056097 | MS.gene66639 | 0.829181 | 5.94E-55 | -1.69E-46 |
MS.gene056181 | MS.gene66639 | 0.81926 | 1.28E-52 | -1.69E-46 |
MS.gene056699 | MS.gene66639 | 0.801823 | 7.51E-49 | -1.69E-46 |
MS.gene056786 | MS.gene66639 | 0.800511 | 1.39E-48 | -1.69E-46 |
MS.gene056787 | MS.gene66639 | 0.810003 | 1.43E-50 | -1.69E-46 |
MS.gene057102 | MS.gene66639 | 0.810047 | 1.40E-50 | -1.69E-46 |
MS.gene057155 | MS.gene66639 | 0.811953 | 5.41E-51 | -1.69E-46 |
MS.gene058429 | MS.gene66639 | 0.801655 | 8.13E-49 | -1.69E-46 |
MS.gene058781 | MS.gene66639 | 0.803595 | 3.23E-49 | -1.69E-46 |
MS.gene060435 | MS.gene66639 | 0.810811 | 9.58E-51 | -1.69E-46 |
MS.gene060527 | MS.gene66639 | 0.802219 | 6.22E-49 | -1.69E-46 |
MS.gene060932 | MS.gene66639 | 0.822799 | 1.95E-53 | -1.69E-46 |
MS.gene060933 | MS.gene66639 | 0.844604 | 6.82E-59 | -1.69E-46 |
MS.gene060935 | MS.gene66639 | 0.854468 | 1.21E-61 | -1.69E-46 |
MS.gene060937 | MS.gene66639 | 0.861683 | 8.64E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66639.t1 | MTR_4g050540 | 79.600 | 500 | 17 | 4 | 1 | 415 | 500 | 999 | 0.0 | 767 |
MS.gene66639.t1 | MTR_2g087530 | 76.143 | 503 | 32 | 4 | 1 | 415 | 493 | 995 | 0.0 | 681 |
MS.gene66639.t1 | MTR_2g087530 | 75.944 | 503 | 32 | 5 | 1 | 415 | 381 | 882 | 0.0 | 672 |
MS.gene66639.t1 | MTR_1g089370 | 62.592 | 409 | 93 | 5 | 66 | 415 | 472 | 879 | 5.42e-161 | 475 |
MS.gene66639.t1 | MTR_1g079950 | 39.274 | 303 | 119 | 7 | 118 | 367 | 4 | 294 | 8.64e-58 | 192 |
MS.gene66639.t1 | MTR_1g079950 | 39.274 | 303 | 119 | 7 | 118 | 367 | 4 | 294 | 8.70e-58 | 192 |
MS.gene66639.t1 | MTR_1g079950 | 39.145 | 304 | 120 | 7 | 117 | 367 | 3 | 294 | 9.10e-58 | 192 |
MS.gene66639.t1 | MTR_1g079950 | 39.145 | 304 | 120 | 7 | 117 | 367 | 32 | 323 | 9.16e-58 | 193 |
MS.gene66639.t1 | MTR_5g081230 | 39.333 | 300 | 124 | 7 | 118 | 367 | 20 | 311 | 1.50e-57 | 191 |
MS.gene66639.t1 | MTR_7g116380 | 38.944 | 303 | 120 | 7 | 118 | 367 | 4 | 294 | 1.77e-57 | 191 |
MS.gene66639.t1 | MTR_7g116380 | 38.944 | 303 | 120 | 7 | 118 | 367 | 4 | 294 | 1.98e-57 | 191 |
MS.gene66639.t1 | MTR_7g112870 | 36.747 | 332 | 136 | 6 | 117 | 397 | 7 | 315 | 3.02e-57 | 191 |
MS.gene66639.t1 | MTR_1g074880 | 39.189 | 296 | 121 | 7 | 123 | 368 | 9 | 295 | 1.10e-56 | 189 |
MS.gene66639.t1 | MTR_1g074880 | 39.189 | 296 | 121 | 7 | 123 | 368 | 9 | 295 | 1.29e-56 | 189 |
MS.gene66639.t1 | MTR_8g098980 | 39.643 | 280 | 107 | 5 | 139 | 365 | 23 | 293 | 1.70e-55 | 186 |
MS.gene66639.t1 | MTR_1g043240 | 38.255 | 298 | 121 | 7 | 123 | 368 | 9 | 295 | 1.64e-53 | 181 |
MS.gene66639.t1 | MTR_8g005010 | 38.768 | 276 | 107 | 5 | 146 | 368 | 27 | 293 | 2.87e-53 | 179 |
MS.gene66639.t1 | MTR_1g074880 | 39.095 | 243 | 92 | 5 | 176 | 368 | 4 | 240 | 1.63e-46 | 161 |
MS.gene66639.t1 | MTR_1g074880 | 39.095 | 243 | 92 | 5 | 176 | 368 | 4 | 240 | 2.23e-46 | 160 |
MS.gene66639.t1 | MTR_1g079950 | 39.344 | 244 | 86 | 5 | 177 | 367 | 34 | 268 | 1.06e-45 | 160 |
MS.gene66639.t1 | MTR_8g062430 | 32.624 | 282 | 132 | 5 | 147 | 377 | 24 | 298 | 2.81e-40 | 145 |
MS.gene66639.t1 | MTR_5g037200 | 32.270 | 282 | 133 | 5 | 147 | 377 | 24 | 298 | 3.82e-39 | 142 |
MS.gene66639.t1 | MTR_7g107310 | 34.100 | 261 | 108 | 5 | 146 | 352 | 30 | 280 | 3.89e-39 | 143 |
MS.gene66639.t1 | MTR_5g093990 | 33.208 | 265 | 118 | 4 | 146 | 358 | 20 | 277 | 3.56e-37 | 137 |
MS.gene66639.t1 | MTR_8g085610 | 33.333 | 261 | 110 | 5 | 146 | 352 | 25 | 275 | 9.36e-37 | 136 |
MS.gene66639.t1 | MTR_8g085610 | 33.077 | 260 | 110 | 5 | 147 | 352 | 2 | 251 | 1.99e-36 | 135 |
MS.gene66639.t1 | MTR_1g039380 | 29.856 | 278 | 136 | 5 | 133 | 358 | 6 | 276 | 3.35e-33 | 127 |
MS.gene66639.t1 | MTR_1g039380 | 29.961 | 257 | 121 | 5 | 154 | 358 | 3 | 252 | 9.02e-31 | 119 |
MS.gene66639.t1 | MTR_3g452710 | 31.765 | 255 | 107 | 6 | 156 | 352 | 268 | 513 | 1.42e-28 | 117 |
MS.gene66639.t1 | MTR_3g452710 | 32.661 | 248 | 100 | 6 | 163 | 352 | 208 | 446 | 1.46e-28 | 117 |
MS.gene66639.t1 | MTR_2g100130 | 28.519 | 270 | 133 | 6 | 138 | 352 | 101 | 365 | 1.47e-28 | 116 |
MS.gene66639.t1 | MTR_2g100130 | 28.519 | 270 | 133 | 6 | 138 | 352 | 200 | 464 | 2.71e-28 | 116 |
MS.gene66639.t1 | MTR_2g100130 | 28.519 | 270 | 133 | 6 | 138 | 352 | 210 | 474 | 2.93e-28 | 116 |
MS.gene66639.t1 | MTR_2g100130 | 28.519 | 270 | 133 | 6 | 138 | 352 | 210 | 474 | 2.98e-28 | 116 |
MS.gene66639.t1 | MTR_2g100130 | 28.519 | 270 | 133 | 6 | 138 | 352 | 171 | 435 | 7.32e-28 | 115 |
MS.gene66639.t1 | MTR_2g100130 | 28.261 | 276 | 138 | 6 | 138 | 358 | 210 | 480 | 1.91e-27 | 114 |
MS.gene66639.t1 | MTR_5g037200 | 42.063 | 126 | 66 | 2 | 147 | 271 | 24 | 143 | 4.57e-27 | 107 |
MS.gene66639.t1 | MTR_2g100130 | 28.261 | 276 | 138 | 6 | 138 | 358 | 171 | 441 | 7.30e-27 | 112 |
MS.gene66639.t1 | MTR_2g100130 | 28.462 | 260 | 126 | 6 | 138 | 342 | 210 | 464 | 3.07e-26 | 110 |
MS.gene66639.t1 | MTR_8g072600 | 38.583 | 127 | 64 | 3 | 155 | 272 | 105 | 226 | 5.32e-19 | 88.2 |
MS.gene66639.t1 | MTR_8g072600 | 38.583 | 127 | 64 | 3 | 155 | 272 | 105 | 226 | 1.87e-18 | 87.4 |
MS.gene66639.t1 | MTR_2g100160 | 37.500 | 120 | 66 | 2 | 156 | 271 | 138 | 252 | 1.59e-16 | 81.3 |
MS.gene66639.t1 | MTR_2g099710 | 26.280 | 293 | 116 | 10 | 148 | 354 | 211 | 489 | 6.83e-13 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66639.t1 | AT2G27210 | 74.802 | 504 | 38 | 5 | 1 | 415 | 503 | 1006 | 0.0 | 699 |
MS.gene66639.t1 | AT2G27210 | 74.802 | 504 | 38 | 5 | 1 | 415 | 498 | 1001 | 0.0 | 699 |
MS.gene66639.t1 | AT1G08420 | 74.455 | 505 | 39 | 6 | 1 | 415 | 509 | 1013 | 0.0 | 688 |
MS.gene66639.t1 | AT1G08420 | 74.455 | 505 | 39 | 6 | 1 | 415 | 514 | 1018 | 0.0 | 688 |
MS.gene66639.t1 | AT4G03080 | 63.325 | 409 | 91 | 4 | 66 | 415 | 473 | 881 | 3.06e-170 | 499 |
MS.gene66639.t1 | AT1G03445 | 49.361 | 391 | 112 | 5 | 69 | 402 | 429 | 790 | 2.82e-118 | 363 |
MS.gene66639.t1 | AT1G03445 | 48.806 | 377 | 107 | 5 | 69 | 388 | 429 | 776 | 4.62e-111 | 344 |
MS.gene66639.t1 | AT5G59160 | 39.189 | 296 | 121 | 5 | 123 | 367 | 17 | 304 | 1.21e-58 | 194 |
MS.gene66639.t1 | AT5G59160 | 39.189 | 296 | 121 | 5 | 123 | 367 | 17 | 304 | 1.21e-58 | 194 |
MS.gene66639.t1 | AT5G59160 | 39.189 | 296 | 121 | 5 | 123 | 367 | 17 | 304 | 1.21e-58 | 194 |
MS.gene66639.t1 | AT2G29400 | 38.127 | 299 | 130 | 4 | 118 | 367 | 18 | 310 | 5.21e-58 | 192 |
MS.gene66639.t1 | AT2G39840 | 38.206 | 301 | 128 | 6 | 117 | 367 | 16 | 308 | 2.38e-57 | 191 |
MS.gene66639.t1 | AT5G27840 | 37.618 | 319 | 136 | 5 | 114 | 381 | 8 | 314 | 2.70e-57 | 191 |
MS.gene66639.t1 | AT5G27840 | 37.618 | 319 | 136 | 5 | 114 | 381 | 8 | 314 | 2.70e-57 | 191 |
MS.gene66639.t1 | AT5G27840 | 38.264 | 311 | 129 | 5 | 114 | 373 | 8 | 306 | 5.25e-57 | 190 |
MS.gene66639.t1 | AT5G27840 | 38.264 | 311 | 129 | 5 | 114 | 373 | 8 | 306 | 8.83e-57 | 190 |
MS.gene66639.t1 | AT3G46820 | 37.417 | 302 | 130 | 5 | 118 | 368 | 12 | 305 | 3.28e-56 | 188 |
MS.gene66639.t1 | AT3G05580 | 37.778 | 315 | 130 | 6 | 119 | 382 | 13 | 312 | 2.12e-55 | 186 |
MS.gene66639.t1 | AT1G64040 | 38.333 | 300 | 125 | 5 | 117 | 365 | 3 | 293 | 2.13e-55 | 186 |
MS.gene66639.t1 | AT4G11240 | 39.706 | 272 | 102 | 5 | 147 | 365 | 31 | 293 | 1.61e-53 | 181 |
MS.gene66639.t1 | AT5G43380 | 38.889 | 270 | 107 | 4 | 147 | 365 | 30 | 292 | 9.10e-53 | 179 |
MS.gene66639.t1 | AT5G43380 | 38.889 | 270 | 107 | 4 | 147 | 365 | 30 | 292 | 9.80e-53 | 179 |
MS.gene66639.t1 | AT5G43380 | 39.623 | 265 | 102 | 4 | 147 | 360 | 30 | 287 | 1.58e-52 | 179 |
MS.gene66639.t1 | AT1G10430 | 31.915 | 282 | 134 | 4 | 147 | 377 | 24 | 298 | 7.27e-40 | 144 |
MS.gene66639.t1 | AT1G10430 | 31.915 | 282 | 134 | 4 | 147 | 377 | 24 | 298 | 7.27e-40 | 144 |
MS.gene66639.t1 | AT1G59830 | 31.560 | 282 | 135 | 4 | 147 | 377 | 24 | 298 | 1.16e-39 | 144 |
MS.gene66639.t1 | AT3G05580 | 37.450 | 251 | 94 | 5 | 119 | 318 | 13 | 251 | 2.41e-39 | 142 |
MS.gene66639.t1 | AT1G69960 | 32.979 | 282 | 131 | 6 | 147 | 377 | 25 | 299 | 4.22e-39 | 142 |
MS.gene66639.t1 | AT4G26720 | 33.585 | 265 | 117 | 4 | 146 | 358 | 20 | 277 | 6.91e-39 | 142 |
MS.gene66639.t1 | AT3G58500 | 33.846 | 260 | 108 | 5 | 147 | 352 | 31 | 280 | 4.37e-38 | 140 |
MS.gene66639.t1 | AT5G55260 | 33.208 | 265 | 118 | 4 | 146 | 358 | 20 | 277 | 1.10e-37 | 139 |
MS.gene66639.t1 | AT2G42500 | 33.462 | 260 | 109 | 5 | 147 | 352 | 31 | 280 | 2.22e-37 | 138 |
MS.gene66639.t1 | AT3G19980 | 29.856 | 278 | 136 | 5 | 133 | 358 | 6 | 276 | 3.62e-33 | 126 |
MS.gene66639.t1 | AT1G50370 | 29.496 | 278 | 137 | 5 | 133 | 358 | 6 | 276 | 7.49e-33 | 125 |
MS.gene66639.t1 | AT5G55260 | 28.758 | 306 | 118 | 5 | 146 | 358 | 20 | 318 | 8.74e-30 | 118 |
MS.gene66639.t1 | AT1G59830 | 31.878 | 229 | 98 | 4 | 147 | 324 | 24 | 245 | 9.05e-30 | 116 |
MS.gene66639.t1 | AT2G42810 | 31.873 | 251 | 110 | 6 | 157 | 352 | 258 | 502 | 5.25e-28 | 116 |
MS.gene66639.t1 | AT2G42810 | 31.873 | 251 | 110 | 6 | 157 | 352 | 257 | 501 | 5.42e-28 | 116 |
MS.gene66639.t1 | AT2G42810 | 31.873 | 251 | 110 | 6 | 157 | 352 | 204 | 448 | 5.47e-28 | 115 |
MS.gene66639.t1 | AT2G42810 | 31.873 | 251 | 110 | 6 | 157 | 352 | 204 | 448 | 5.47e-28 | 115 |
MS.gene66639.t1 | AT2G42810 | 31.873 | 251 | 110 | 6 | 157 | 352 | 204 | 448 | 5.47e-28 | 115 |
MS.gene66639.t1 | AT2G42500 | 42.149 | 121 | 67 | 1 | 146 | 266 | 30 | 147 | 2.11e-27 | 107 |
MS.gene66639.t1 | AT2G42500 | 42.149 | 121 | 67 | 1 | 146 | 266 | 30 | 147 | 2.94e-27 | 107 |
MS.gene66639.t1 | AT2G42500 | 42.149 | 121 | 67 | 1 | 146 | 266 | 30 | 147 | 3.84e-27 | 107 |
MS.gene66639.t1 | AT2G42500 | 32.174 | 230 | 93 | 5 | 177 | 352 | 13 | 233 | 6.08e-27 | 108 |
MS.gene66639.t1 | AT5G63870 | 33.566 | 143 | 85 | 2 | 135 | 272 | 37 | 174 | 6.58e-19 | 87.0 |
MS.gene66639.t1 | AT5G63870 | 33.566 | 143 | 85 | 2 | 135 | 272 | 37 | 174 | 3.39e-18 | 86.3 |
MS.gene66639.t1 | AT5G63870 | 33.566 | 143 | 85 | 2 | 135 | 272 | 37 | 174 | 3.39e-18 | 86.3 |
MS.gene66639.t1 | AT1G48120 | 34.752 | 141 | 84 | 3 | 135 | 272 | 615 | 750 | 6.48e-15 | 77.8 |
MS.gene66639.t1 | AT5G10900 | 31.469 | 143 | 85 | 4 | 110 | 246 | 159 | 294 | 1.45e-13 | 72.8 |
MS.gene66639.t1 | AT5G10900 | 31.469 | 143 | 85 | 4 | 110 | 246 | 159 | 294 | 1.52e-13 | 72.8 |
MS.gene66639.t1 | AT5G10900 | 31.469 | 143 | 85 | 4 | 110 | 246 | 159 | 294 | 1.61e-13 | 72.8 |
Find 120 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAGCAGCAGTTGCACTTTC+TGG | 0.074910 | 4.3:+49251424 | None:intergenic |
AGGGCACCAATTAAAATATT+TGG | 0.147759 | 4.3:-49250656 | MS.gene66639:CDS |
TGACGTTCTGGCGAAGTTTC+TGG | 0.183902 | 4.3:+49247590 | None:intergenic |
AGAGACAAATATACCTTCTT+TGG | 0.185188 | 4.3:+49251364 | None:intergenic |
GTGATTTACATGGGCAGTTT+GGG | 0.211414 | 4.3:-49250634 | MS.gene66639:CDS |
GGTCCAGGGTTAGTTACTTT+TGG | 0.218224 | 4.3:-49249262 | MS.gene66639:CDS |
TGCTGGGGCGATATTAGTTT+TGG | 0.237880 | 4.3:-49247669 | MS.gene66639:CDS |
CACTGAAAATGCCTTGCTTC+AGG | 0.242308 | 4.3:-49252433 | MS.gene66639:CDS |
ACTCAATTCGAAAACCAAAA+AGG | 0.280052 | 4.3:+49249723 | None:intergenic |
AAGTCTTCTGCTTGCTTTGA+AGG | 0.285629 | 4.3:-49249893 | MS.gene66639:intron |
ATGCGCCTCTTTGACGAGTA+TGG | 0.303119 | 4.3:-49250605 | MS.gene66639:CDS |
GGTGATTTACATGGGCAGTT+TGG | 0.308128 | 4.3:-49250635 | MS.gene66639:CDS |
CGTATTAAATGAATATTGTT+TGG | 0.311742 | 4.3:+49249776 | None:intergenic |
GCAGAAGACTTATAGTTTCC+AGG | 0.339335 | 4.3:+49249905 | None:intergenic |
CATTAATATCTGCAGCTTCA+TGG | 0.365494 | 4.3:+49249747 | None:intergenic |
TCCATTCTCTTGCCGTGCCT+TGG | 0.370864 | 4.3:+49251765 | None:intergenic |
TCCTAGGAGATTATGTTGAT+AGG | 0.374773 | 4.3:-49249939 | MS.gene66639:CDS |
GGTAATGGATGAATCAGTTT+AGG | 0.384582 | 4.3:+49247626 | None:intergenic |
AACTGGTGGTTTCCAGCCAC+GGG | 0.386044 | 4.3:+49250772 | None:intergenic |
GAGACAAATATACCTTCTTT+GGG | 0.386185 | 4.3:+49251365 | None:intergenic |
GCAGAGACTGGTGGAGCATT+AGG | 0.392732 | 4.3:-49251514 | MS.gene66639:CDS |
GAAGGCAGACGGGTCAGTTA+TGG | 0.394505 | 4.3:-49251451 | MS.gene66639:CDS |
TAGCAAAGGAGTTGAGTATC+TGG | 0.402168 | 4.3:-49251839 | MS.gene66639:CDS |
ACTGAAAATGCCTTGCTTCA+GGG | 0.402168 | 4.3:-49252432 | MS.gene66639:CDS |
GTATCTTCAATATGACGTTC+TGG | 0.409956 | 4.3:+49247578 | None:intergenic |
AAGGCAGACGGGTCAGTTAT+GGG | 0.415806 | 4.3:-49251450 | MS.gene66639:CDS |
ATGACCGTGGTTCGCTGGCT+TGG | 0.419614 | 4.3:-49247295 | MS.gene66639:CDS |
ATTGATCAGTTTGAAAATGA+AGG | 0.423462 | 4.3:-49251469 | MS.gene66639:CDS |
CCTAGGAGATTATGTTGATA+GGG | 0.424523 | 4.3:-49249938 | MS.gene66639:CDS |
ACCTCTTAAAACCCCGTGGC+TGG | 0.426692 | 4.3:-49250784 | MS.gene66639:CDS |
ATGCCTTGCTTCAGGGGTCT+AGG | 0.428340 | 4.3:-49252425 | MS.gene66639:intron |
GCCAAGGCACGGCAAGAGAA+TGG | 0.432499 | 4.3:-49251766 | MS.gene66639:CDS |
CAAAATTCCATTACACGGTC+AGG | 0.433952 | 4.3:+49247904 | None:intergenic |
CGACCGAATGCTAGAGGTCC+AGG | 0.435844 | 4.3:-49249277 | MS.gene66639:CDS |
GAGCATTAGGTGGCATGGTT+AGG | 0.435993 | 4.3:-49251501 | MS.gene66639:CDS |
AAAATATTTGGTGATTTACA+TGG | 0.439355 | 4.3:-49250644 | MS.gene66639:CDS |
TCAGCCCCACGGTCCCGATC+AGG | 0.440492 | 4.3:+49251730 | None:intergenic |
GTGGTTATTGCCGCAGAGAC+TGG | 0.443202 | 4.3:-49251526 | MS.gene66639:CDS |
AATAGTTTGTAGCTGAGAAA+AGG | 0.445366 | 4.3:+49247794 | None:intergenic |
ACAGCATGAAACGGTTCTAT+AGG | 0.455231 | 4.3:-49249336 | MS.gene66639:CDS |
GCTATATCACCGGCAGTTGA+TGG | 0.459620 | 4.3:+49250578 | None:intergenic |
CTGAAAATGCCTTGCTTCAG+GGG | 0.460104 | 4.3:-49252431 | MS.gene66639:CDS |
GGTGAAAGTGCAGGTGGTAA+TGG | 0.462912 | 4.3:+49247611 | None:intergenic |
CTGTATGACAGTTGGTTCGC+TGG | 0.466427 | 4.3:+49250682 | None:intergenic |
CACTGGCTGCTGCCAAGGCA+CGG | 0.473002 | 4.3:-49251777 | MS.gene66639:CDS |
TGATCGGGACCGTGGGGCTG+AGG | 0.474950 | 4.3:-49251728 | MS.gene66639:CDS |
AACCAACTGTCATACAGCTT+AGG | 0.477320 | 4.3:-49250676 | MS.gene66639:CDS |
AGCAAATGACCGTGGTTCGC+TGG | 0.482727 | 4.3:-49247300 | MS.gene66639:CDS |
TATATCGATTATCTATTCCT+AGG | 0.483370 | 4.3:-49249955 | MS.gene66639:CDS |
TGCCACACTGGCTGCTGCCA+AGG | 0.487318 | 4.3:-49251782 | MS.gene66639:CDS |
ATAGGTACTGCAAATAATGC+TGG | 0.489726 | 4.3:-49247686 | MS.gene66639:intron |
TGATAGGGGCCAACACAGCC+TGG | 0.491899 | 4.3:-49249923 | MS.gene66639:CDS |
AACCCTGGACCTCTAGCATT+CGG | 0.502808 | 4.3:+49249274 | None:intergenic |
CCCTATCAACATAATCTCCT+AGG | 0.508047 | 4.3:+49249938 | None:intergenic |
AGGAGTTGAATCACCTGATC+GGG | 0.508379 | 4.3:-49251743 | MS.gene66639:CDS |
CGACCTCTAGTTGGTGTTGG+TGG | 0.514229 | 4.3:+49247332 | None:intergenic |
ACCAACTGTCATACAGCTTA+GGG | 0.516291 | 4.3:-49250675 | MS.gene66639:CDS |
AATTGAGTGCATTGAGAGGA+TGG | 0.519249 | 4.3:-49249708 | MS.gene66639:intron |
GAACTGGTGGTTTCCAGCCA+CGG | 0.524769 | 4.3:+49250771 | None:intergenic |
TAGGTACTGCAAATAATGCT+GGG | 0.528832 | 4.3:-49247685 | MS.gene66639:CDS |
TATCAATAGTGTCCCAAAGA+AGG | 0.529780 | 4.3:-49251377 | MS.gene66639:intron |
AATCACCTGATCGGGACCGT+GGG | 0.533321 | 4.3:-49251735 | MS.gene66639:CDS |
ACAGAGAATGACAGCGTGGA+AGG | 0.535847 | 4.3:-49249304 | MS.gene66639:CDS |
ATAGTTTGTAGCTGAGAAAA+GGG | 0.542289 | 4.3:+49247795 | None:intergenic |
TTATAGTTTCCAGGCTGTGT+TGG | 0.545135 | 4.3:+49249914 | None:intergenic |
TATTGAAGATACCTGGATGC+AGG | 0.546581 | 4.3:-49247567 | MS.gene66639:intron |
GCCCTAAGCTGTATGACAGT+TGG | 0.553062 | 4.3:+49250674 | None:intergenic |
TGATTTACATGGGCAGTTTG+GGG | 0.553499 | 4.3:-49250633 | MS.gene66639:CDS |
GTTGCAGCCTGACCGTGTAA+TGG | 0.556995 | 4.3:-49247911 | MS.gene66639:intron |
TTTGGGTAGGGATCTTGTGG+TGG | 0.559437 | 4.3:-49247651 | MS.gene66639:CDS |
ACCCCAAAAGTAACTAACCC+TGG | 0.560640 | 4.3:+49249259 | None:intergenic |
GAACCACGGTCATTTGCTAC+AGG | 0.562198 | 4.3:+49247305 | None:intergenic |
TTAAGAATGACAGCATGAAA+CGG | 0.563617 | 4.3:-49249345 | MS.gene66639:intron |
TGCCTTGGCAGCAGCCAGTG+TGG | 0.565287 | 4.3:+49251780 | None:intergenic |
AACGTCATATTGAAGATACC+TGG | 0.568523 | 4.3:-49247574 | MS.gene66639:CDS |
TTGACGGAATACCTGCATCC+AGG | 0.569460 | 4.3:+49247556 | None:intergenic |
GTTTGAAAATGAAGGCAGAC+GGG | 0.571368 | 4.3:-49251461 | MS.gene66639:CDS |
TGGTGGAGCATTAGGTGGCA+TGG | 0.578886 | 4.3:-49251506 | MS.gene66639:CDS |
GAGGAGTTGAATCACCTGAT+CGG | 0.581652 | 4.3:-49251744 | MS.gene66639:CDS |
CTGCTAGAAAGTTATTAGAT+CGG | 0.583835 | 4.3:-49251408 | MS.gene66639:CDS |
CTAGGGTAGCCTCAGCCCCA+CGG | 0.588762 | 4.3:+49251719 | None:intergenic |
AAATATTTGGTGATTTACAT+GGG | 0.589386 | 4.3:-49250643 | MS.gene66639:CDS |
AACAATATTCATTTAATACG+TGG | 0.589704 | 4.3:-49249773 | MS.gene66639:CDS |
TATTGCAAAATTCCATTACA+CGG | 0.589836 | 4.3:+49247899 | None:intergenic |
GCTGGAAACCACCAGTTCGA+CGG | 0.590734 | 4.3:-49250766 | MS.gene66639:CDS |
TTCTCAGCTACAAACTATTG+CGG | 0.593117 | 4.3:-49247790 | MS.gene66639:intron |
CTAGGAGATTATGTTGATAG+GGG | 0.594858 | 4.3:-49249937 | MS.gene66639:CDS |
GAAGTTTCTGGTGAAAGTGC+AGG | 0.596639 | 4.3:+49247602 | None:intergenic |
GAATCACCTGATCGGGACCG+TGG | 0.597024 | 4.3:-49251736 | MS.gene66639:CDS |
ACAGGAGGACGACCTCTAGT+TGG | 0.601390 | 4.3:+49247323 | None:intergenic |
CAGAGAATGACAGCGTGGAA+GGG | 0.602329 | 4.3:-49249303 | MS.gene66639:CDS |
GGACGACCTCTAGTTGGTGT+TGG | 0.603208 | 4.3:+49247329 | None:intergenic |
AGTTTGAAAATGAAGGCAGA+CGG | 0.607904 | 4.3:-49251462 | MS.gene66639:CDS |
GTTATTGCCGCAGAGACTGG+TGG | 0.610143 | 4.3:-49251523 | MS.gene66639:CDS |
GACCGAATGCTAGAGGTCCA+GGG | 0.611385 | 4.3:-49249276 | MS.gene66639:CDS |
TCCACGCTGTCATTCTCTGT+AGG | 0.611873 | 4.3:+49249307 | None:intergenic |
TTCGAATTGAGTGCATTGAG+AGG | 0.613732 | 4.3:-49249712 | MS.gene66639:CDS |
TATGGTTCACCATCAACTGC+CGG | 0.615823 | 4.3:-49250587 | MS.gene66639:CDS |
TGAAGCTATCAGTGCCACAC+TGG | 0.621819 | 4.3:-49251794 | MS.gene66639:CDS |
GCACATGAATGCGTGATGGA+TGG | 0.624035 | 4.3:-49247850 | MS.gene66639:CDS |
ATACCTAGACCCCTGAAGCA+AGG | 0.626170 | 4.3:+49252422 | None:intergenic |
GGGCTGCGACCGAATGCTAG+AGG | 0.627867 | 4.3:-49249283 | MS.gene66639:CDS |
AGGAACTTACGCTATATCAC+CGG | 0.628831 | 4.3:+49250568 | None:intergenic |
GAGACTGGTGGAGCATTAGG+TGG | 0.638450 | 4.3:-49251511 | MS.gene66639:CDS |
GTGAACCATACTCGTCAAAG+AGG | 0.650621 | 4.3:+49250600 | None:intergenic |
TTGAACAGGAGAACTAGCAA+AGG | 0.651766 | 4.3:-49251853 | MS.gene66639:intron |
TCGTGCACATGAATGCGTGA+TGG | 0.660261 | 4.3:-49247854 | MS.gene66639:CDS |
CCACGGTCATTTGCTACAGG+AGG | 0.670379 | 4.3:+49247308 | None:intergenic |
AAGGCACGGCAAGAGAATGG+AGG | 0.674733 | 4.3:-49251763 | MS.gene66639:CDS |
ATCACCTGATCGGGACCGTG+GGG | 0.676953 | 4.3:-49251734 | MS.gene66639:CDS |
GTTTCTGGTGAAAGTGCAGG+TGG | 0.678650 | 4.3:+49247605 | None:intergenic |
ACTGGTGGTTTCCAGCCACG+GGG | 0.683656 | 4.3:+49250773 | None:intergenic |
AGGTACTGCAAATAATGCTG+GGG | 0.686484 | 4.3:-49247684 | MS.gene66639:CDS |
AGACCACCAACACCAACTAG+AGG | 0.687730 | 4.3:-49247335 | MS.gene66639:CDS |
ATATCCAAGCCAGCGAACCA+CGG | 0.706438 | 4.3:+49247291 | None:intergenic |
CCTCCTGTAGCAAATGACCG+TGG | 0.727849 | 4.3:-49247308 | MS.gene66639:CDS |
ATCTTTGTGATAGTGCAGAG+AGG | 0.731261 | 4.3:-49250712 | MS.gene66639:CDS |
GCACACCTCTTAAAACCCCG+TGG | 0.733416 | 4.3:-49250788 | MS.gene66639:CDS |
TAATGCTCCACCAGTCTCTG+CGG | 0.733520 | 4.3:+49251516 | None:intergenic |
TCCTACAGAGAATGACAGCG+TGG | 0.743451 | 4.3:-49249308 | MS.gene66639:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTATAAATAATTTTTTTTG+GGG | - | chr4.3:49252354-49252373 | MS.gene66639:intron | 10.0% |
!! | GATCAAAATTAATTTCTATT+AGG | - | chr4.3:49248563-49248582 | MS.gene66639:intron | 15.0% |
!! | TAAATAGATATTACATATGA+TGG | - | chr4.3:49250578-49250597 | MS.gene66639:CDS | 15.0% |
!!! | AAAGTTTTTCATATAAATGA+TGG | + | chr4.3:49247868-49247887 | None:intergenic | 15.0% |
!!! | AAATCACCAAATATTTTAAT+TGG | + | chr4.3:49249092-49249111 | None:intergenic | 15.0% |
!!! | TAGTAAATTTTGATTACTAA+GGG | - | chr4.3:49248127-49248146 | MS.gene66639:intron | 15.0% |
!!! | TTATTTTCCCTATTAAATTT+TGG | - | chr4.3:49252019-49252038 | MS.gene66639:intron | 15.0% |
!! | AAAAAAATTATTTGCATGCA+TGG | - | chr4.3:49250217-49250236 | MS.gene66639:intron | 20.0% |
!! | AAAAAAGGAAAAATCTATTG+GGG | + | chr4.3:49247481-49247500 | None:intergenic | 20.0% |
!! | AAAAAATTATTTGCATGCAT+GGG | - | chr4.3:49250218-49250237 | MS.gene66639:intron | 20.0% |
!! | AAATTAGCAAGAGAAAAAAT+TGG | + | chr4.3:49249745-49249764 | None:intergenic | 20.0% |
!! | AACAATATTCATTTAATACG+TGG | - | chr4.3:49249966-49249985 | MS.gene66639:intron | 20.0% |
!! | ACAATCATTAATATATGACA+AGG | + | chr4.3:49251713-49251732 | None:intergenic | 20.0% |
!! | ATCTATTTATATCATTATCC+AGG | + | chr4.3:49250567-49250586 | None:intergenic | 20.0% |
!! | CAAAAAAGGAAAAATCTATT+GGG | + | chr4.3:49247482-49247501 | None:intergenic | 20.0% |
!! | CGTATTAAATGAATATTGTT+TGG | + | chr4.3:49249966-49249985 | None:intergenic | 20.0% |
!! | GAATAAATAGAAGATAAACT+GGG | - | chr4.3:49251118-49251137 | MS.gene66639:intron | 20.0% |
!! | TAGTGAGATAATAAAAACTA+GGG | + | chr4.3:49247814-49247833 | None:intergenic | 20.0% |
!! | TGAATAAATAGAAGATAAAC+TGG | - | chr4.3:49251117-49251136 | MS.gene66639:intron | 20.0% |
!! | TTAATAGGGAAAATAATTGA+AGG | + | chr4.3:49252015-49252034 | None:intergenic | 20.0% |
!! | TTATATGAAAAACTTTGAAC+AGG | - | chr4.3:49247872-49247891 | MS.gene66639:CDS | 20.0% |
!! | TTCATTTAATAGTTAAGCAA+TGG | - | chr4.3:49248600-49248619 | MS.gene66639:intron | 20.0% |
!! | TTTGACATTTAATCTATGAT+GGG | - | chr4.3:49247710-49247729 | MS.gene66639:intron | 20.0% |
!!! | AAAATATTTGGTGATTTACA+TGG | - | chr4.3:49249095-49249114 | MS.gene66639:intron | 20.0% |
!!! | AAATATTTGGTGATTTACAT+GGG | - | chr4.3:49249096-49249115 | MS.gene66639:intron | 20.0% |
!!! | ATAACATTTTGATATCAGAA+AGG | + | chr4.3:49251803-49251822 | None:intergenic | 20.0% |
!!! | ATACATGGTAAAACATTTTA+TGG | - | chr4.3:49250084-49250103 | MS.gene66639:intron | 20.0% |
!!! | ATTTATTCACCCTATTTTTT+TGG | + | chr4.3:49251106-49251125 | None:intergenic | 20.0% |
!!! | GTAGTAAATTTTGATTACTA+AGG | - | chr4.3:49248126-49248145 | MS.gene66639:intron | 20.0% |
!!! | TAGTTTTTATTATCTCACTA+GGG | - | chr4.3:49247814-49247833 | MS.gene66639:CDS | 20.0% |
!!! | TTTTGACATTTAATCTATGA+TGG | - | chr4.3:49247709-49247728 | MS.gene66639:intron | 20.0% |
! | AAAAAGATTGCAAACGATTT+AGG | + | chr4.3:49250769-49250788 | None:intergenic | 25.0% |
! | AAAAAGGAAAAATCTATTGG+GGG | + | chr4.3:49247480-49247499 | None:intergenic | 25.0% |
! | AAAAATTATTTGCATGCATG+GGG | - | chr4.3:49250219-49250238 | MS.gene66639:intron | 25.0% |
! | AAAGGGAATCTTAAAATTAG+AGG | + | chr4.3:49251654-49251673 | None:intergenic | 25.0% |
! | AACATTACATCCATCATAAA+AGG | + | chr4.3:49251672-49251691 | None:intergenic | 25.0% |
! | AATGATAAACACTATTAGAG+AGG | + | chr4.3:49248503-49248522 | None:intergenic | 25.0% |
! | ACACATGCCAAAATTTAATA+GGG | + | chr4.3:49252029-49252048 | None:intergenic | 25.0% |
! | ACATTACATCCATCATAAAA+GGG | + | chr4.3:49251671-49251690 | None:intergenic | 25.0% |
! | ACTTATATAAAACCATCCAT+GGG | + | chr4.3:49249202-49249221 | None:intergenic | 25.0% |
! | ATAATGTGAAAACACATGAT+TGG | - | chr4.3:49248538-49248557 | MS.gene66639:intron | 25.0% |
! | ATACCATCTTAAAATTTGGT+TGG | + | chr4.3:49251480-49251499 | None:intergenic | 25.0% |
! | ATATCATAGTATTCCATGAT+GGG | + | chr4.3:49249488-49249507 | None:intergenic | 25.0% |
! | ATGATAAACACTATTAGAGA+GGG | + | chr4.3:49248502-49248521 | None:intergenic | 25.0% |
! | ATTGATCAGTTTGAAAATGA+AGG | - | chr4.3:49248270-49248289 | MS.gene66639:intron | 25.0% |
! | CATATTACCAAATAACCTAT+TGG | + | chr4.3:49249287-49249306 | None:intergenic | 25.0% |
! | CTAGTGAGATAATAAAAACT+AGG | + | chr4.3:49247815-49247834 | None:intergenic | 25.0% |
! | CTGAAAACAAGTATATAAGT+GGG | - | chr4.3:49251407-49251426 | MS.gene66639:CDS | 25.0% |
! | GCAAAAAAGGAAAAATCTAT+TGG | + | chr4.3:49247483-49247502 | None:intergenic | 25.0% |
! | GGGTTAATACCAAAAAAATA+GGG | - | chr4.3:49251094-49251113 | MS.gene66639:intron | 25.0% |
! | GTGTCCATTTAAATATCTAT+TGG | - | chr4.3:49247769-49247788 | MS.gene66639:intron | 25.0% |
! | TAATGTGAAAACACATGATT+GGG | - | chr4.3:49248539-49248558 | MS.gene66639:intron | 25.0% |
! | TACACTTATAGTTGCAAAAA+AGG | + | chr4.3:49247496-49247515 | None:intergenic | 25.0% |
! | TACCATCTTAAAATTTGGTT+GGG | + | chr4.3:49251479-49251498 | None:intergenic | 25.0% |
! | TACTTATATAAAACCATCCA+TGG | + | chr4.3:49249203-49249222 | None:intergenic | 25.0% |
! | TATATCATAGTATTCCATGA+TGG | + | chr4.3:49249489-49249508 | None:intergenic | 25.0% |
! | TATGATTATGTGAAATTTGC+AGG | - | chr4.3:49249932-49249951 | MS.gene66639:CDS | 25.0% |
! | TATTGCAAAATTCCATTACA+CGG | + | chr4.3:49251843-49251862 | None:intergenic | 25.0% |
! | TCAGCCAATAGATATTTAAA+TGG | + | chr4.3:49247776-49247795 | None:intergenic | 25.0% |
! | TCTCATACCATCTTAAAATT+TGG | + | chr4.3:49251484-49251503 | None:intergenic | 25.0% |
! | TCTGAAAACAAGTATATAAG+TGG | - | chr4.3:49251406-49251425 | MS.gene66639:CDS | 25.0% |
! | TCTTCTATAAACTTGACAAT+AGG | - | chr4.3:49247631-49247650 | MS.gene66639:CDS | 25.0% |
! | TGGGTTAATACCAAAAAAAT+AGG | - | chr4.3:49251093-49251112 | MS.gene66639:intron | 25.0% |
! | TTAAATTTGTGCCATATAAG+AGG | - | chr4.3:49251746-49251765 | MS.gene66639:CDS | 25.0% |
! | TTGTCTATTTGTAGCTTAAA+AGG | - | chr4.3:49249261-49249280 | MS.gene66639:CDS | 25.0% |
! | TTTATTGAATTCATCAAGCT+TGG | - | chr4.3:49248869-49248888 | MS.gene66639:intron | 25.0% |
!! | AAATTTTGTGTGAAGTTCAA+AGG | + | chr4.3:49247604-49247623 | None:intergenic | 25.0% |
!! | AGTTTTTATTATCTCACTAG+GGG | - | chr4.3:49247815-49247834 | MS.gene66639:CDS | 25.0% |
!! | ATATTAAAACTTTTCCTCTC+TGG | - | chr4.3:49247840-49247859 | MS.gene66639:CDS | 25.0% |
!! | ATGGGAAAACATTTTATACA+TGG | - | chr4.3:49250069-49250088 | MS.gene66639:intron | 25.0% |
!! | ATTTAAATATCTATTGGCTG+AGG | - | chr4.3:49247775-49247794 | MS.gene66639:intron | 25.0% |
!! | TATATCGATTATCTATTCCT+AGG | - | chr4.3:49249784-49249803 | MS.gene66639:CDS | 25.0% |
!! | TATTCAAGTACATTTTTGTC+TGG | - | chr4.3:49248178-49248197 | MS.gene66639:intron | 25.0% |
!! | TTTAAATATCTATTGGCTGA+GGG | - | chr4.3:49247776-49247795 | MS.gene66639:intron | 25.0% |
!! | TTTATAAAATGGTTTGCAGT+TGG | - | chr4.3:49252213-49252232 | MS.gene66639:intron | 25.0% |
!!! | AAGTAATGGATAGTTACTTT+GGG | - | chr4.3:49249218-49249237 | MS.gene66639:intron | 25.0% |
!!! | AGTGTGATTTTTGAAATTAG+AGG | - | chr4.3:49247738-49247757 | MS.gene66639:intron | 25.0% |
!!! | ATTTTTTTGGTATTAACCCA+AGG | + | chr4.3:49251093-49251112 | None:intergenic | 25.0% |
!!! | CTAGTTTTTATTATCTCACT+AGG | - | chr4.3:49247813-49247832 | MS.gene66639:CDS | 25.0% |
!!! | GGATGGTTTTATATAAGTAA+TGG | - | chr4.3:49249204-49249223 | MS.gene66639:intron | 25.0% |
!!! | TAAGTAATGGATAGTTACTT+TGG | - | chr4.3:49249217-49249236 | MS.gene66639:intron | 25.0% |
!!! | TAATGTTTGTTGTTAGTTAC+AGG | - | chr4.3:49251685-49251704 | MS.gene66639:intron | 25.0% |
!!! | TATTAAATTTTGGCATGTGT+GGG | - | chr4.3:49252029-49252048 | MS.gene66639:intron | 25.0% |
!!! | TTTAAGATTCCCTTTTATGA+TGG | - | chr4.3:49251659-49251678 | MS.gene66639:intron | 25.0% |
AAAACAAGTATATAAGTGGG+AGG | - | chr4.3:49251410-49251429 | MS.gene66639:CDS | 30.0% | |
AAAATTATTTGCATGCATGG+GGG | - | chr4.3:49250220-49250239 | MS.gene66639:intron | 30.0% | |
AAGACAAGAATCAGTTAGAT+TGG | + | chr4.3:49249403-49249422 | None:intergenic | 30.0% | |
AAGATATTTGTTTCCCACTA+GGG | + | chr4.3:49248040-49248059 | None:intergenic | 30.0% | |
AATGCTGACATTTCCTTTAA+TGG | - | chr4.3:49248668-49248687 | MS.gene66639:intron | 30.0% | |
AATTAAACAGACGGTTTATC+CGG | + | chr4.3:49250171-49250190 | None:intergenic | 30.0% | |
ACTCAATTCGAAAACCAAAA+AGG | + | chr4.3:49250019-49250038 | None:intergenic | 30.0% | |
AGAATAAATAGAATCCTGAC+TGG | - | chr4.3:49251005-49251024 | MS.gene66639:intron | 30.0% | |
AGAGACAAATATACCTTCTT+TGG | + | chr4.3:49248378-49248397 | None:intergenic | 30.0% | |
AGGTATGAAAAACTCAACAT+CGG | + | chr4.3:49248821-49248840 | None:intergenic | 30.0% | |
AGTTTCTTAACCTTCTATGT+AGG | - | chr4.3:49248923-49248942 | MS.gene66639:intron | 30.0% | |
ATCAGATGCATTATTCTGAT+TGG | - | chr4.3:49248623-49248642 | MS.gene66639:intron | 30.0% | |
ATGGTAAGGAATTTCATACA+TGG | - | chr4.3:49250050-49250069 | MS.gene66639:intron | 30.0% | |
ATGTCAAAAGAAAACCACTT+TGG | + | chr4.3:49247698-49247717 | None:intergenic | 30.0% | |
ATTTAAGTATCTCTCTCTAG+TGG | + | chr4.3:49247370-49247389 | None:intergenic | 30.0% | |
CACAAGTTTAACCTCTTATA+TGG | + | chr4.3:49251760-49251779 | None:intergenic | 30.0% | |
CACACATGCCAAAATTTAAT+AGG | + | chr4.3:49252030-49252049 | None:intergenic | 30.0% | |
CATGTCTTTATACATAGTGT+TGG | + | chr4.3:49251311-49251330 | None:intergenic | 30.0% | |
CTATTGCAAAATACTAGGAT+TGG | - | chr4.3:49252309-49252328 | MS.gene66639:intron | 30.0% | |
CTCAATTCGAAAACCAAAAA+GGG | + | chr4.3:49250018-49250037 | None:intergenic | 30.0% | |
CTGATCTATTGCAAAATACT+AGG | - | chr4.3:49252304-49252323 | MS.gene66639:intron | 30.0% | |
CTGCTAGAAAGTTATTAGAT+CGG | - | chr4.3:49248331-49248350 | MS.gene66639:intron | 30.0% | |
GAAATAAATATGCTCCAAAG+TGG | - | chr4.3:49247681-49247700 | MS.gene66639:CDS | 30.0% | |
GAGAAGTGATTCAACAAAAT+AGG | + | chr4.3:49248841-49248860 | None:intergenic | 30.0% | |
GAGACAAATATACCTTCTTT+GGG | + | chr4.3:49248377-49248396 | None:intergenic | 30.0% | |
GGTTAAACTTGTGTATATTG+TGG | - | chr4.3:49251767-49251786 | MS.gene66639:CDS | 30.0% | |
GTATTGCTTATCAAGTTTGA+TGG | - | chr4.3:49249896-49249915 | MS.gene66639:CDS | 30.0% | |
GTTAATCGTTTGCAATCTTA+AGG | - | chr4.3:49250906-49250925 | MS.gene66639:intron | 30.0% | |
GTTTACATTGTGCTTTGATT+GGG | - | chr4.3:49249537-49249556 | MS.gene66639:intron | 30.0% | |
TAAAAGGCCAATAGGTTATT+TGG | - | chr4.3:49249277-49249296 | MS.gene66639:CDS | 30.0% | |
TAAACTTGTGTATATTGTGG+CGG | - | chr4.3:49251770-49251789 | MS.gene66639:CDS | 30.0% | |
TCATGCTGTCATTCTTAAAA+AGG | + | chr4.3:49250392-49250411 | None:intergenic | 30.0% | |
TCTCTAGTGTCAATTTAGAT+GGG | + | chr4.3:49250812-49250831 | None:intergenic | 30.0% | |
TGGTAAGGAATTTCATACAT+GGG | - | chr4.3:49250051-49250070 | MS.gene66639:intron | 30.0% | |
TGTGCATGTGTATATTTGAT+AGG | + | chr4.3:49252267-49252286 | None:intergenic | 30.0% | |
TGTTTACATTGTGCTTTGAT+TGG | - | chr4.3:49249536-49249555 | MS.gene66639:intron | 30.0% | |
TTAAGAATGACAGCATGAAA+CGG | - | chr4.3:49250394-49250413 | MS.gene66639:intron | 30.0% | |
TTAGAGGAAATATCAAATGC+TGG | + | chr4.3:49251638-49251657 | None:intergenic | 30.0% | |
! | AATAGTTTGTAGCTGAGAAA+AGG | + | chr4.3:49251948-49251967 | None:intergenic | 30.0% |
! | AATTTTAAGCAGCACTAAGA+GGG | + | chr4.3:49252241-49252260 | None:intergenic | 30.0% |
! | ACATTTAATCTATGATGGGA+GGG | - | chr4.3:49247714-49247733 | MS.gene66639:intron | 30.0% |
! | AGGGCACCAATTAAAATATT+TGG | - | chr4.3:49249083-49249102 | MS.gene66639:intron | 30.0% |
! | ATAGTTTGTAGCTGAGAAAA+GGG | + | chr4.3:49251947-49251966 | None:intergenic | 30.0% |
! | ATTATATTTGAAGCCATGCT+TGG | - | chr4.3:49250944-49250963 | MS.gene66639:intron | 30.0% |
! | ATTGTAATCTATCGACTATC+AGG | - | chr4.3:49249426-49249445 | MS.gene66639:intron | 30.0% |
! | TCTAGGTATGATAGGTTTTA+CGG | - | chr4.3:49247331-49247350 | MS.gene66639:CDS | 30.0% |
!! | ATAGTGTTGGTGGATAATAT+TGG | + | chr4.3:49251298-49251317 | None:intergenic | 30.0% |
!! | CTATTAAATTTTGGCATGTG+TGG | - | chr4.3:49252028-49252047 | MS.gene66639:intron | 30.0% |
!! | TAGTACAACTCTTTGAAGTT+GGG | + | chr4.3:49251565-49251584 | None:intergenic | 30.0% |
AAACTTAACCCCTACAAAAC+CGG | + | chr4.3:49251454-49251473 | None:intergenic | 35.0% | |
AACGTCATATTGAAGATACC+TGG | - | chr4.3:49252165-49252184 | MS.gene66639:intron | 35.0% | |
AACTTACTATTGAGTGCAGA+GGG | - | chr4.3:49248405-49248424 | MS.gene66639:intron | 35.0% | |
ACATCACATCTTTCTGATGA+TGG | - | chr4.3:49248763-49248782 | MS.gene66639:intron | 35.0% | |
ACTATTGCGGTATTTGTTCA+CGG | - | chr4.3:49251962-49251981 | MS.gene66639:intron | 35.0% | |
AGAATCAGTTAGATTGGTGA+TGG | + | chr4.3:49249397-49249416 | None:intergenic | 35.0% | |
AGTAGCATCAGTAAATGAGA+AGG | + | chr4.3:49251608-49251627 | None:intergenic | 35.0% | |
AGTTGTTATCAGTCTTACAC+CGG | - | chr4.3:49251372-49251391 | MS.gene66639:intron | 35.0% | |
AGTTTGAAAATGAAGGCAGA+CGG | - | chr4.3:49248277-49248296 | MS.gene66639:intron | 35.0% | |
ATGATTAAACCTGAATCTGG+AGG | - | chr4.3:49248062-49248081 | MS.gene66639:intron | 35.0% | |
CACATTCCATCTTACAACTA+GGG | + | chr4.3:49247428-49247447 | None:intergenic | 35.0% | |
CATCACATCTTTCTGATGAT+GGG | - | chr4.3:49248764-49248783 | MS.gene66639:intron | 35.0% | |
CATTAATATCTGCAGCTTCA+TGG | + | chr4.3:49249995-49250014 | None:intergenic | 35.0% | |
CCTAGGAGATTATGTTGATA+GGG | - | chr4.3:49249801-49249820 | MS.gene66639:intron | 35.0% | |
CTCTCTAGTGTCAATTTAGA+TGG | + | chr4.3:49250813-49250832 | None:intergenic | 35.0% | |
GAAGATATTTGTTTCCCACT+AGG | + | chr4.3:49248041-49248060 | None:intergenic | 35.0% | |
GCTATGAGGCAAGAAAAAAT+TGG | + | chr4.3:49249681-49249700 | None:intergenic | 35.0% | |
GGATAAACCGTCTGTTTAAT+TGG | - | chr4.3:49250170-49250189 | MS.gene66639:intron | 35.0% | |
GTAGCATCAGTAAATGAGAA+GGG | + | chr4.3:49251607-49251626 | None:intergenic | 35.0% | |
GTATCTTCAATATGACGTTC+TGG | + | chr4.3:49252164-49252183 | None:intergenic | 35.0% | |
GTTCCAAGTGATTTATTGAC+CGG | + | chr4.3:49250252-49250271 | None:intergenic | 35.0% | |
TAACTTACTATTGAGTGCAG+AGG | - | chr4.3:49248404-49248423 | MS.gene66639:intron | 35.0% | |
TATCAATAGTGTCCCAAAGA+AGG | - | chr4.3:49248362-49248381 | MS.gene66639:intron | 35.0% | |
TATTCAGCGTCCTATTACAA+TGG | - | chr4.3:49250282-49250301 | MS.gene66639:intron | 35.0% | |
TCAATCTAATCCCAAAAACC+AGG | - | chr4.3:49251149-49251168 | MS.gene66639:intron | 35.0% | |
TCCATGATTAAACCTGAATC+TGG | - | chr4.3:49248059-49248078 | MS.gene66639:intron | 35.0% | |
TCCTAGGAGATTATGTTGAT+AGG | - | chr4.3:49249800-49249819 | MS.gene66639:intron | 35.0% | |
TGTAGTAGAACGACAACAAA+AGG | + | chr4.3:49248746-49248765 | None:intergenic | 35.0% | |
TTCTCAGCTACAAACTATTG+CGG | - | chr4.3:49251949-49251968 | MS.gene66639:intron | 35.0% | |
TTGGTATTAACCCAAGGAAA+GGG | + | chr4.3:49251087-49251106 | None:intergenic | 35.0% | |
TTGTAGCTTAAAAGGCCAAT+AGG | - | chr4.3:49249269-49249288 | MS.gene66639:CDS | 35.0% | |
TTTGGTATTAACCCAAGGAA+AGG | + | chr4.3:49251088-49251107 | None:intergenic | 35.0% | |
! | AACATTGTGATTTTCTGCTC+AGG | - | chr4.3:49250117-49250136 | MS.gene66639:intron | 35.0% |
! | ACATTGTGATTTTCTGCTCA+GGG | - | chr4.3:49250118-49250137 | MS.gene66639:intron | 35.0% |
! | ATAGGTACTGCAAATAATGC+TGG | - | chr4.3:49252053-49252072 | MS.gene66639:intron | 35.0% |
! | CAATTTTAAGCAGCACTAAG+AGG | + | chr4.3:49252242-49252261 | None:intergenic | 35.0% |
! | CTAGGAGATTATGTTGATAG+GGG | - | chr4.3:49249802-49249821 | MS.gene66639:intron | 35.0% |
! | GACATTTAATCTATGATGGG+AGG | - | chr4.3:49247713-49247732 | MS.gene66639:intron | 35.0% |
! | GCAGATATTAATGCCCTTTT+TGG | - | chr4.3:49250002-49250021 | MS.gene66639:intron | 35.0% |
! | GTCTTTATACATAGTGTTGG+TGG | + | chr4.3:49251308-49251327 | None:intergenic | 35.0% |
! | TAGGTACTGCAAATAATGCT+GGG | - | chr4.3:49252054-49252073 | MS.gene66639:intron | 35.0% |
! | TCCAGATTCAGGTTTAATCA+TGG | + | chr4.3:49248063-49248082 | None:intergenic | 35.0% |
! | TTAATCAGTTGCATTTTGCC+TGG | - | chr4.3:49250546-49250565 | MS.gene66639:intron | 35.0% |
! | TTTTCAGACCTTATCTCATC+CGG | + | chr4.3:49251394-49251413 | None:intergenic | 35.0% |
!! | GGTAATGGATGAATCAGTTT+AGG | + | chr4.3:49252116-49252135 | None:intergenic | 35.0% |
!! | GTAGTACAACTCTTTGAAGT+TGG | + | chr4.3:49251566-49251585 | None:intergenic | 35.0% |
!! | TCATTTTTCCAAACCAAGCA+TGG | + | chr4.3:49250960-49250979 | None:intergenic | 35.0% |
!! | TGAAGGTACTGTGGATTTAT+AGG | - | chr4.3:49249863-49249882 | MS.gene66639:intron | 35.0% |
!! | TGGTGGAAAATGTTTTCAAG+TGG | - | chr4.3:49248441-49248460 | MS.gene66639:intron | 35.0% |
!! | TTATCAAGTTTGATGGTGTC+AGG | - | chr4.3:49249903-49249922 | MS.gene66639:CDS | 35.0% |
!! | TTGAAGCATCGTTTGATACT+TGG | - | chr4.3:49250719-49250738 | MS.gene66639:CDS | 35.0% |
!! | TTGTGCTGATGGATCTTTTA+TGG | - | chr4.3:49250317-49250336 | MS.gene66639:intron | 35.0% |
!! | TTTTGTCTGGAATGTTTCTC+AGG | - | chr4.3:49248191-49248210 | MS.gene66639:intron | 35.0% |
!!! | TTTTTTGGGGTGTTAATTGC+AGG | - | chr4.3:49252367-49252386 | MS.gene66639:intron | 35.0% |
AAAACCATCCATGGGAACTA+AGG | + | chr4.3:49249194-49249213 | None:intergenic | 40.0% | |
AACCAACTGTCATACAGCTT+AGG | - | chr4.3:49249063-49249082 | MS.gene66639:intron | 40.0% | |
AAGTCTTCTGCTTGCTTTGA+AGG | - | chr4.3:49249846-49249865 | MS.gene66639:intron | 40.0% | |
AAGTTCAAAGGCCCATTAGT+AGG | + | chr4.3:49247592-49247611 | None:intergenic | 40.0% | |
AATGAAAACCCCCCTACTAA+TGG | - | chr4.3:49247577-49247596 | MS.gene66639:CDS | 40.0% | |
AATTGAGTGCATTGAGAGGA+TGG | - | chr4.3:49250031-49250050 | MS.gene66639:intron | 40.0% | |
ACAGCATGAAACGGTTCTAT+AGG | - | chr4.3:49250403-49250422 | MS.gene66639:intron | 40.0% | |
ACCAACTGTCATACAGCTTA+GGG | - | chr4.3:49249064-49249083 | MS.gene66639:intron | 40.0% | |
ACTGAAAATGCCTTGCTTCA+GGG | - | chr4.3:49247307-49247326 | MS.gene66639:CDS | 40.0% | |
AGAGAGATGGAATTTGGACA+TGG | - | chr4.3:49250143-49250162 | MS.gene66639:intron | 40.0% | |
AGGAACTTACGCTATATCAC+CGG | + | chr4.3:49249174-49249193 | None:intergenic | 40.0% | |
AGTTCAAAGGCCCATTAGTA+GGG | + | chr4.3:49247591-49247610 | None:intergenic | 40.0% | |
ATGAAAACCCCCCTACTAAT+GGG | - | chr4.3:49247578-49247597 | MS.gene66639:CDS | 40.0% | |
ATTTCTGTGACAGTCTGCAT+CGG | - | chr4.3:49249560-49249579 | MS.gene66639:intron | 40.0% | |
CAAAATTCCATTACACGGTC+AGG | + | chr4.3:49251838-49251857 | None:intergenic | 40.0% | |
CAAGAAATGCACTCCACTAA+TGG | + | chr4.3:49249244-49249263 | None:intergenic | 40.0% | |
CCCTATCAACATAATCTCCT+AGG | + | chr4.3:49249804-49249823 | None:intergenic | 40.0% | |
GAGGAAGCCAATTAAACAGA+CGG | + | chr4.3:49250180-49250199 | None:intergenic | 40.0% | |
GATCCTGCTTCCATTGTAAT+AGG | + | chr4.3:49250295-49250314 | None:intergenic | 40.0% | |
GCACATTCCATCTTACAACT+AGG | + | chr4.3:49247429-49247448 | None:intergenic | 40.0% | |
GCAGAAGACTTATAGTTTCC+AGG | + | chr4.3:49249837-49249856 | None:intergenic | 40.0% | |
GGAATGCATGCAATGCATAT+CGG | + | chr4.3:49249467-49249486 | None:intergenic | 40.0% | |
GTAGAACGACAACAAAAGGA+AGG | + | chr4.3:49248742-49248761 | None:intergenic | 40.0% | |
GTGATTTACATGGGCAGTTT+GGG | - | chr4.3:49249105-49249124 | MS.gene66639:intron | 40.0% | |
GTTTGAAAATGAAGGCAGAC+GGG | - | chr4.3:49248278-49248297 | MS.gene66639:intron | 40.0% | |
TAGCAAAGGAGTTGAGTATC+TGG | - | chr4.3:49247900-49247919 | MS.gene66639:CDS | 40.0% | |
TATTGAAGATACCTGGATGC+AGG | - | chr4.3:49252172-49252191 | MS.gene66639:intron | 40.0% | |
TCCATCTTACAACTAGGGAA+AGG | + | chr4.3:49247423-49247442 | None:intergenic | 40.0% | |
TCCTTTAATGGCTCAGCAAT+GGG | - | chr4.3:49248680-49248699 | MS.gene66639:intron | 40.0% | |
TCCTTTCCCTAGTTGTAAGA+TGG | - | chr4.3:49247419-49247438 | MS.gene66639:intron | 40.0% | |
TCTGTTGATCTGATAGTCGA+TGG | - | chr4.3:49249636-49249655 | MS.gene66639:intron | 40.0% | |
TGATTTACATGGGCAGTTTG+GGG | - | chr4.3:49249106-49249125 | MS.gene66639:intron | 40.0% | |
TGCAAACGATTAACCCACTT+GGG | + | chr4.3:49250900-49250919 | None:intergenic | 40.0% | |
TGGTATTAACCCAAGGAAAG+GGG | + | chr4.3:49251086-49251105 | None:intergenic | 40.0% | |
TGTGCTATGACCTACATAGA+AGG | + | chr4.3:49248936-49248955 | None:intergenic | 40.0% | |
TTACATCCTAATGCGCTATG+AGG | + | chr4.3:49249695-49249714 | None:intergenic | 40.0% | |
TTATAGTTTCCAGGCTGTGT+TGG | + | chr4.3:49249828-49249847 | None:intergenic | 40.0% | |
TTCCTTTAATGGCTCAGCAA+TGG | - | chr4.3:49248679-49248698 | MS.gene66639:intron | 40.0% | |
TTCGAATTGAGTGCATTGAG+AGG | - | chr4.3:49250027-49250046 | MS.gene66639:intron | 40.0% | |
TTCTCAATTAGAGCTGCAAG+AGG | + | chr4.3:49250199-49250218 | None:intergenic | 40.0% | |
TTGAACAGGAGAACTAGCAA+AGG | - | chr4.3:49247886-49247905 | MS.gene66639:CDS | 40.0% | |
TTGCAAACGATTAACCCACT+TGG | + | chr4.3:49250901-49250920 | None:intergenic | 40.0% | |
TTTGATCTGTGTGTACAGCT+AGG | + | chr4.3:49251258-49251277 | None:intergenic | 40.0% | |
! | AGGTACTGCAAATAATGCTG+GGG | - | chr4.3:49252055-49252074 | MS.gene66639:intron | 40.0% |
! | ATCCTGACTGGAACAGTTTT+TGG | - | chr4.3:49251017-49251036 | MS.gene66639:intron | 40.0% |
! | ATCTTTGTGATAGTGCAGAG+AGG | - | chr4.3:49249027-49249046 | MS.gene66639:intron | 40.0% |
! | ATTTGAAGCCATGCTTGGTT+TGG | - | chr4.3:49250949-49250968 | MS.gene66639:intron | 40.0% |
! | TAGTTACTTTGGGCCATTAG+TGG | - | chr4.3:49249228-49249247 | MS.gene66639:intron | 40.0% |
! | TATAAATGATGGAGCCAGAG+AGG | + | chr4.3:49247857-49247876 | None:intergenic | 40.0% |
!! | AGATTATGGCTCCTGGTTTT+TGG | + | chr4.3:49251163-49251182 | None:intergenic | 40.0% |
!! | ATTTTGGCATGTGTGGGAAT+AGG | - | chr4.3:49252035-49252054 | MS.gene66639:intron | 40.0% |
!! | GATTATGGCTCCTGGTTTTT+GGG | + | chr4.3:49251162-49251181 | None:intergenic | 40.0% |
!! | GGCCCAACCAAATTTTAAGA+TGG | - | chr4.3:49251474-49251493 | MS.gene66639:CDS | 40.0% |
!! | GGTTTTGTAGGGGTTAAGTT+TGG | - | chr4.3:49251453-49251472 | MS.gene66639:CDS | 40.0% |
!!! | GGCGATATTAGTTTTGGGTA+GGG | - | chr4.3:49252076-49252095 | MS.gene66639:intron | 40.0% |
!!! | GTCCAGGGTTAGTTACTTTT+GGG | - | chr4.3:49250478-49250497 | MS.gene66639:intron | 40.0% |
!!! | TCCAGGGTTAGTTACTTTTG+GGG | - | chr4.3:49250479-49250498 | MS.gene66639:intron | 40.0% |
AACGATTAACCCACTTGGGT+TGG | + | chr4.3:49250896-49250915 | None:intergenic | 45.0% | |
AAGAAAAACTGCCGTCGAAC+TGG | + | chr4.3:49248987-49249006 | None:intergenic | 45.0% | |
ACCCATTGCTGAGCCATTAA+AGG | + | chr4.3:49248684-49248703 | None:intergenic | 45.0% | |
ACCCCAAAAGTAACTAACCC+TGG | + | chr4.3:49250483-49250502 | None:intergenic | 45.0% | |
AGCAAGTGGTCCAATTGGAT+AGG | + | chr4.3:49251508-49251527 | None:intergenic | 45.0% | |
AGCAGGATCAATTGTGCTGA+TGG | - | chr4.3:49250306-49250325 | MS.gene66639:intron | 45.0% | |
AGCCTGATTCCACCAGAATT+TGG | + | chr4.3:49248089-49248108 | None:intergenic | 45.0% | |
AGGAGTTGAATCACCTGATC+GGG | - | chr4.3:49247996-49248015 | MS.gene66639:intron | 45.0% | |
AGGGTGAGAGAGATGGAATT+TGG | - | chr4.3:49250137-49250156 | MS.gene66639:intron | 45.0% | |
AGGGTGCATATAACTGATGG+TGG | - | chr4.3:49248424-49248443 | MS.gene66639:intron | 45.0% | |
AGTGCATTGAGAGGATGGTA+AGG | - | chr4.3:49250036-49250055 | MS.gene66639:intron | 45.0% | |
AGTTCCTTAGTTCCCATGGA+TGG | - | chr4.3:49249187-49249206 | MS.gene66639:intron | 45.0% | |
ATGGAATTTGGACATGGCAC+CGG | - | chr4.3:49250149-49250168 | MS.gene66639:intron | 45.0% | |
CACTGAAAATGCCTTGCTTC+AGG | - | chr4.3:49247306-49247325 | MS.gene66639:CDS | 45.0% | |
CAGATTCAGGACAACACACT+CGG | + | chr4.3:49248796-49248815 | None:intergenic | 45.0% | |
CATGCAATGCATATCGGTGA+TGG | + | chr4.3:49249461-49249480 | None:intergenic | 45.0% | |
CATTGCATGCATTCCCATCA+TGG | - | chr4.3:49249472-49249491 | MS.gene66639:intron | 45.0% | |
CGTAAGTTCCTTAGTTCCCA+TGG | - | chr4.3:49249183-49249202 | MS.gene66639:intron | 45.0% | |
CGTCCTATTACAATGGAAGC+AGG | - | chr4.3:49250289-49250308 | MS.gene66639:intron | 45.0% | |
CTGAAAATGCCTTGCTTCAG+GGG | - | chr4.3:49247308-49247327 | MS.gene66639:CDS | 45.0% | |
GAGGAGTTGAATCACCTGAT+CGG | - | chr4.3:49247995-49248014 | MS.gene66639:intron | 45.0% | |
GCAGGAGGTAACAAACTAAG+TGG | + | chr4.3:49249375-49249394 | None:intergenic | 45.0% | |
GCCTGATTCCACCAGAATTT+GGG | + | chr4.3:49248088-49248107 | None:intergenic | 45.0% | |
GGTATGAGAGCCTATCCAAT+TGG | - | chr4.3:49251495-49251514 | MS.gene66639:CDS | 45.0% | |
GGTGATTTACATGGGCAGTT+TGG | - | chr4.3:49249104-49249123 | MS.gene66639:intron | 45.0% | |
GTCCAAAAACTGTTCCAGTC+AGG | + | chr4.3:49251022-49251041 | None:intergenic | 45.0% | |
GTCTTACACCGGATGAGATA+AGG | - | chr4.3:49251383-49251402 | MS.gene66639:CDS | 45.0% | |
GTGAACCATACTCGTCAAAG+AGG | + | chr4.3:49249142-49249161 | None:intergenic | 45.0% | |
GTTCAAAGGCCCATTAGTAG+GGG | + | chr4.3:49247590-49247609 | None:intergenic | 45.0% | |
TAATCACGAGTTCGGTCAGT+AGG | + | chr4.3:49251057-49251076 | None:intergenic | 45.0% | |
TATGGTTCACCATCAACTGC+CGG | - | chr4.3:49249152-49249171 | MS.gene66639:intron | 45.0% | |
TGGCCGGTCAATAAATCACT+TGG | - | chr4.3:49250246-49250265 | MS.gene66639:intron | 45.0% | |
TTCAAAGGCCCATTAGTAGG+GGG | + | chr4.3:49247589-49247608 | None:intergenic | 45.0% | |
TTCAGGGGTCTAGGTATGAT+AGG | - | chr4.3:49247323-49247342 | MS.gene66639:CDS | 45.0% | |
TTCTTGCCTCATAGCGCATT+AGG | - | chr4.3:49249686-49249705 | MS.gene66639:intron | 45.0% | |
! | AGTTCGACGGCAGTTTTTCT+TGG | - | chr4.3:49248986-49249005 | MS.gene66639:intron | 45.0% |
! | ATTTGCATGCATGGGGGTAT+TGG | - | chr4.3:49250226-49250245 | MS.gene66639:intron | 45.0% |
! | CAATTGGACCACTTGCTACT+GGG | - | chr4.3:49251511-49251530 | MS.gene66639:CDS | 45.0% |
! | CAGAGGGTGCATATAACTGA+TGG | - | chr4.3:49248421-49248440 | MS.gene66639:intron | 45.0% |
! | TGTCTGGAATGTTTCTCAGG+TGG | - | chr4.3:49248194-49248213 | MS.gene66639:intron | 45.0% |
!! | GAAGTTTCTGGTGAAAGTGC+AGG | + | chr4.3:49252140-49252159 | None:intergenic | 45.0% |
!! | TCAGTTAGATTGGTGATGGC+AGG | + | chr4.3:49249393-49249412 | None:intergenic | 45.0% |
!! | TGCTGGGGCGATATTAGTTT+TGG | - | chr4.3:49252070-49252089 | MS.gene66639:intron | 45.0% |
!! | TGCTTGCTTTGAAGGTACTG+TGG | - | chr4.3:49249854-49249873 | MS.gene66639:intron | 45.0% |
!!! | AGTTTTGGGTAGGGATCTTG+TGG | - | chr4.3:49252085-49252104 | MS.gene66639:intron | 45.0% |
!!! | GCTGGGGCGATATTAGTTTT+GGG | - | chr4.3:49252071-49252090 | MS.gene66639:intron | 45.0% |
!!! | GGGCGATATTAGTTTTGGGT+AGG | - | chr4.3:49252075-49252094 | MS.gene66639:intron | 45.0% |
!!! | GGTCCAGGGTTAGTTACTTT+TGG | - | chr4.3:49250477-49250496 | MS.gene66639:intron | 45.0% |
!!! | TGTTTTTAGCGCACAGACTG+AGG | + | chr4.3:49251186-49251205 | None:intergenic | 45.0% |
!!! | TCAAATATTTTTTTATAAAA+TGG | - | chr4.3:49252202-49252221 | MS.gene66639:intron | 5.0% |
!!! | TGTTATAAATAATTTTTTTT+GGG | - | chr4.3:49252353-49252372 | MS.gene66639:intron | 5.0% |
!!! | TTGTTATAAATAATTTTTTT+TGG | - | chr4.3:49252352-49252371 | MS.gene66639:intron | 5.0% |
!!! | TTTTATAAAAAAATATTTGA+CGG | + | chr4.3:49252202-49252221 | None:intergenic | 5.0% |
AAAAACTGCCGTCGAACTGG+TGG | + | chr4.3:49248984-49249003 | None:intergenic | 50.0% | |
AACCCTGGACCTCTAGCATT+CGG | + | chr4.3:49250468-49250487 | None:intergenic | 50.0% | |
AAGGCAGACGGGTCAGTTAT+GGG | - | chr4.3:49248289-49248308 | MS.gene66639:intron | 50.0% | |
ACAGAGAATGACAGCGTGGA+AGG | - | chr4.3:49250435-49250454 | MS.gene66639:intron | 50.0% | |
ACTGAGGAGATTATGGCTCC+TGG | + | chr4.3:49251170-49251189 | None:intergenic | 50.0% | |
AGACCACCAACACCAACTAG+AGG | - | chr4.3:49252404-49252423 | MS.gene66639:intron | 50.0% | |
ATACCTAGACCCCTGAAGCA+AGG | + | chr4.3:49247320-49247339 | None:intergenic | 50.0% | |
ATATCCAAGCCAGCGAACCA+CGG | + | chr4.3:49252451-49252470 | None:intergenic | 50.0% | |
ATGCGCCTCTTTGACGAGTA+TGG | - | chr4.3:49249134-49249153 | MS.gene66639:intron | 50.0% | |
ATTACCTAGGCCCCTTTCCT+TGG | - | chr4.3:49251073-49251092 | MS.gene66639:intron | 50.0% | |
CAGAGAATGACAGCGTGGAA+GGG | - | chr4.3:49250436-49250455 | MS.gene66639:intron | 50.0% | |
CCAGTAGCAAGTGGTCCAAT+TGG | + | chr4.3:49251513-49251532 | None:intergenic | 50.0% | |
CGAGTGTGTTGTCCTGAATC+TGG | - | chr4.3:49248794-49248813 | MS.gene66639:intron | 50.0% | |
CGCACAGACTGAGGAGATTA+TGG | + | chr4.3:49251177-49251196 | None:intergenic | 50.0% | |
CTAGCAGCAGTTGCACTTTC+TGG | + | chr4.3:49248318-49248337 | None:intergenic | 50.0% | |
CTCAACATCGGACCAGATTC+AGG | + | chr4.3:49248809-49248828 | None:intergenic | 50.0% | |
GAATCGAACCTGAGACCTCA+AGG | - | chr4.3:49250832-49250851 | MS.gene66639:intron | 50.0% | |
GAATCTGGAGGCCCAAATTC+TGG | - | chr4.3:49248074-49248093 | MS.gene66639:intron | 50.0% | |
GAATTTGGGCCTCCAGATTC+AGG | + | chr4.3:49248074-49248093 | None:intergenic | 50.0% | |
GACCGAACTCGTGATTACCT+AGG | - | chr4.3:49251060-49251079 | MS.gene66639:intron | 50.0% | |
GAGCATTAGGTGGCATGGTT+AGG | - | chr4.3:49248238-49248257 | MS.gene66639:intron | 50.0% | |
GCCCAAATTCTGGTGGAATC+AGG | - | chr4.3:49248084-49248103 | MS.gene66639:intron | 50.0% | |
GCCCTAAGCTGTATGACAGT+TGG | + | chr4.3:49249068-49249087 | None:intergenic | 50.0% | |
GCTATATCACCGGCAGTTGA+TGG | + | chr4.3:49249164-49249183 | None:intergenic | 50.0% | |
GGCCTAGGTAATCACGAGTT+CGG | + | chr4.3:49251065-49251084 | None:intergenic | 50.0% | |
TAATGCTCCACCAGTCTCTG+CGG | + | chr4.3:49248226-49248245 | None:intergenic | 50.0% | |
TAATGGCTCAGCAATGGGTC+AGG | - | chr4.3:49248685-49248704 | MS.gene66639:intron | 50.0% | |
TCAAAGGCCCATTAGTAGGG+GGG | + | chr4.3:49247588-49247607 | None:intergenic | 50.0% | |
TCCACGCTGTCATTCTCTGT+AGG | + | chr4.3:49250435-49250454 | None:intergenic | 50.0% | |
TCCTACAGAGAATGACAGCG+TGG | - | chr4.3:49250431-49250450 | MS.gene66639:intron | 50.0% | |
TCGTGCACATGAATGCGTGA+TGG | - | chr4.3:49251885-49251904 | MS.gene66639:intron | 50.0% | |
TGAAGCTATCAGTGCCACAC+TGG | - | chr4.3:49247945-49247964 | MS.gene66639:intron | 50.0% | |
TGACGTTCTGGCGAAGTTTC+TGG | + | chr4.3:49252152-49252171 | None:intergenic | 50.0% | |
TTACCTAGGCCCCTTTCCTT+GGG | - | chr4.3:49251074-49251093 | MS.gene66639:intron | 50.0% | |
TTGACGGAATACCTGCATCC+AGG | + | chr4.3:49252186-49252205 | None:intergenic | 50.0% | |
TTTGGGTAGGGATCTTGTGG+TGG | - | chr4.3:49252088-49252107 | MS.gene66639:intron | 50.0% | |
! | CCAATTGGACCACTTGCTAC+TGG | - | chr4.3:49251510-49251529 | MS.gene66639:CDS | 50.0% |
! | GAACCACGGTCATTTGCTAC+AGG | + | chr4.3:49252437-49252456 | None:intergenic | 50.0% |
! | GCACATGAATGCGTGATGGA+TGG | - | chr4.3:49251889-49251908 | MS.gene66639:intron | 50.0% |
! | GGTGAAAGTGCAGGTGGTAA+TGG | + | chr4.3:49252131-49252150 | None:intergenic | 50.0% |
! | TTGGCCTAGTGCTATTGGCT+TGG | + | chr4.3:49250877-49250896 | None:intergenic | 50.0% |
!! | AAAACCGGCTTGTAGGGTGA+AGG | + | chr4.3:49251439-49251458 | None:intergenic | 50.0% |
!! | AAACCGGCTTGTAGGGTGAA+GGG | + | chr4.3:49251438-49251457 | None:intergenic | 50.0% |
!! | ACCCTACAAGCCGGTTTTGT+AGG | - | chr4.3:49251441-49251460 | MS.gene66639:CDS | 50.0% |
!! | CCCTACAAAACCGGCTTGTA+GGG | + | chr4.3:49251445-49251464 | None:intergenic | 50.0% |
!! | CCCTACAAGCCGGTTTTGTA+GGG | - | chr4.3:49251442-49251461 | MS.gene66639:CDS | 50.0% |
!! | CCTACAAGCCGGTTTTGTAG+GGG | - | chr4.3:49251443-49251462 | MS.gene66639:CDS | 50.0% |
!! | CTGTATGACAGTTGGTTCGC+TGG | + | chr4.3:49249060-49249079 | None:intergenic | 50.0% |
!! | GTTAGATTGGTGATGGCAGG+AGG | + | chr4.3:49249390-49249409 | None:intergenic | 50.0% |
!! | GTTTCTGGTGAAAGTGCAGG+TGG | + | chr4.3:49252137-49252156 | None:intergenic | 50.0% |
!! | TGGCCTAGTGCTATTGGCTT+GGG | + | chr4.3:49250876-49250895 | None:intergenic | 50.0% |
!! | TTGGGTTGGCCTAGTGCTAT+TGG | + | chr4.3:49250882-49250901 | None:intergenic | 50.0% |
!!! | GGCTTTGAGCGTTTTGCTCA+GGG | - | chr4.3:49251910-49251929 | MS.gene66639:intron | 50.0% |
!!! | TGGCTTTGAGCGTTTTGCTC+AGG | - | chr4.3:49251909-49251928 | MS.gene66639:intron | 50.0% |
AACTGGTGGTTTCCAGCCAC+GGG | + | chr4.3:49248970-49248989 | None:intergenic | 55.0% | |
AAGGCACGGCAAGAGAATGG+AGG | - | chr4.3:49247976-49247995 | MS.gene66639:intron | 55.0% | |
AATCACCTGATCGGGACCGT+GGG | - | chr4.3:49248004-49248023 | MS.gene66639:intron | 55.0% | |
ACAGGAGGACGACCTCTAGT+TGG | + | chr4.3:49252419-49252438 | None:intergenic | 55.0% | |
ACCTCTTAAAACCCCGTGGC+TGG | - | chr4.3:49248955-49248974 | MS.gene66639:intron | 55.0% | |
AGCAAATGACCGTGGTTCGC+TGG | - | chr4.3:49252439-49252458 | MS.gene66639:CDS | 55.0% | |
AGCACTAGGCCAACCCAAGT+GGG | - | chr4.3:49250884-49250903 | MS.gene66639:intron | 55.0% | |
ATGCCTTGCTTCAGGGGTCT+AGG | - | chr4.3:49247314-49247333 | MS.gene66639:CDS | 55.0% | |
CCTCCTGTAGCAAATGACCG+TGG | - | chr4.3:49252431-49252450 | MS.gene66639:CDS | 55.0% | |
CTACTGGGTCTCTTGCTACC+GGG | - | chr4.3:49251526-49251545 | MS.gene66639:CDS | 55.0% | |
GAACTGGTGGTTTCCAGCCA+CGG | + | chr4.3:49248971-49248990 | None:intergenic | 55.0% | |
GAAGGCAGACGGGTCAGTTA+TGG | - | chr4.3:49248288-49248307 | MS.gene66639:intron | 55.0% | |
GACCGAATGCTAGAGGTCCA+GGG | - | chr4.3:49250463-49250482 | MS.gene66639:intron | 55.0% | |
GCAAGAGACCCAGTAGCAAG+TGG | + | chr4.3:49251522-49251541 | None:intergenic | 55.0% | |
GCACACCTCTTAAAACCCCG+TGG | - | chr4.3:49248951-49248970 | MS.gene66639:intron | 55.0% | |
GCTACTGGGTCTCTTGCTAC+CGG | - | chr4.3:49251525-49251544 | MS.gene66639:CDS | 55.0% | |
GCTGGAAACCACCAGTTCGA+CGG | - | chr4.3:49248973-49248992 | MS.gene66639:intron | 55.0% | |
GGTCCCAAGCCAATAGCACT+AGG | - | chr4.3:49250870-49250889 | MS.gene66639:intron | 55.0% | |
GTGGTTATTGCCGCAGAGAC+TGG | - | chr4.3:49248213-49248232 | MS.gene66639:intron | 55.0% | |
GTTATTGCCGCAGAGACTGG+TGG | - | chr4.3:49248216-49248235 | MS.gene66639:intron | 55.0% | |
GTTGCAGCCTGACCGTGTAA+TGG | - | chr4.3:49251828-49251847 | MS.gene66639:CDS | 55.0% | |
TAACCCAAGGAAAGGGGCCT+AGG | + | chr4.3:49251080-49251099 | None:intergenic | 55.0% | |
TAGCACTAGGCCAACCCAAG+TGG | - | chr4.3:49250883-49250902 | MS.gene66639:intron | 55.0% | |
TCCATTCTCTTGCCGTGCCT+TGG | + | chr4.3:49247977-49247996 | None:intergenic | 55.0% | |
TCGAACCTGAGACCTCAAGG+AGG | - | chr4.3:49250835-49250854 | MS.gene66639:intron | 55.0% | |
TCTGCTCAGGGTGAGAGAGA+TGG | - | chr4.3:49250130-49250149 | MS.gene66639:intron | 55.0% | |
TCTGGAGGCCCAAATTCTGG+TGG | - | chr4.3:49248077-49248096 | MS.gene66639:intron | 55.0% | |
! | CCACGGTCATTTGCTACAGG+AGG | + | chr4.3:49252434-49252453 | None:intergenic | 55.0% |
! | GAGACTGGTGGAGCATTAGG+TGG | - | chr4.3:49248228-49248247 | MS.gene66639:intron | 55.0% |
! | GCAGAGACTGGTGGAGCATT+AGG | - | chr4.3:49248225-49248244 | MS.gene66639:intron | 55.0% |
! | GGACGACCTCTAGTTGGTGT+TGG | + | chr4.3:49252413-49252432 | None:intergenic | 55.0% |
! | TGGTGGAGCATTAGGTGGCA+TGG | - | chr4.3:49248233-49248252 | MS.gene66639:intron | 55.0% |
!! | AGTGCTATTGGCTTGGGACC+TGG | + | chr4.3:49250870-49250889 | None:intergenic | 55.0% |
!! | CCCCTACAAAACCGGCTTGT+AGG | + | chr4.3:49251446-49251465 | None:intergenic | 55.0% |
!! | CGACCTCTAGTTGGTGTTGG+TGG | + | chr4.3:49252410-49252429 | None:intergenic | 55.0% |
!! | GTGCTATTGGCTTGGGACCT+GGG | + | chr4.3:49250869-49250888 | None:intergenic | 55.0% |
!! | TGAAGTTGGGTTGACCCGAG+TGG | + | chr4.3:49251552-49251571 | None:intergenic | 55.0% |
!!! | TCCAGCCACGGGGTTTTAAG+AGG | + | chr4.3:49248959-49248978 | None:intergenic | 55.0% |
ACTGGTGGTTTCCAGCCACG+GGG | + | chr4.3:49248969-49248988 | None:intergenic | 60.0% | |
ATCACCTGATCGGGACCGTG+GGG | - | chr4.3:49248005-49248024 | MS.gene66639:intron | 60.0% | |
CGACCGAATGCTAGAGGTCC+AGG | - | chr4.3:49250462-49250481 | MS.gene66639:intron | 60.0% | |
GAATCACCTGATCGGGACCG+TGG | - | chr4.3:49248003-49248022 | MS.gene66639:intron | 60.0% | |
GCACCCTTCACCCTACAAGC+CGG | - | chr4.3:49251432-49251451 | MS.gene66639:CDS | 60.0% | |
GCCAAGGCACGGCAAGAGAA+TGG | - | chr4.3:49247973-49247992 | MS.gene66639:intron | 60.0% | |
GTGCTCCTCCTTGAGGTCTC+AGG | + | chr4.3:49250843-49250862 | None:intergenic | 60.0% | |
TCTCTTGCTACCGGGCCACT+CGG | - | chr4.3:49251534-49251553 | MS.gene66639:intron | 60.0% | |
TGATAGGGGCCAACACAGCC+TGG | - | chr4.3:49249816-49249835 | MS.gene66639:intron | 60.0% | |
! | ATGACCGTGGTTCGCTGGCT+TGG | - | chr4.3:49252444-49252463 | MS.gene66639:CDS | 60.0% |
! | TCAAGGAGGAGCACACTCCC+AGG | - | chr4.3:49250849-49250868 | MS.gene66639:intron | 60.0% |
! | TGGGAGTGTGCTCCTCCTTG+AGG | + | chr4.3:49250850-49250869 | None:intergenic | 60.0% |
!! | GCATGCATGGGGGTATTGGC+CGG | - | chr4.3:49250230-49250249 | MS.gene66639:intron | 60.0% |
CTAGGGTAGCCTCAGCCCCA+CGG | + | chr4.3:49248023-49248042 | None:intergenic | 65.0% | |
CTCTTGCTACCGGGCCACTC+GGG | - | chr4.3:49251535-49251554 | MS.gene66639:intron | 65.0% | |
GGGCTGCGACCGAATGCTAG+AGG | - | chr4.3:49250456-49250475 | MS.gene66639:intron | 65.0% | |
GGGGCTGAGGCTACCCTAGT+GGG | - | chr4.3:49248024-49248043 | MS.gene66639:intron | 65.0% | |
TGCCTTGGCAGCAGCCAGTG+TGG | + | chr4.3:49247962-49247981 | None:intergenic | 65.0% | |
TGGGGCTGAGGCTACCCTAG+TGG | - | chr4.3:49248023-49248042 | MS.gene66639:intron | 65.0% | |
! | CACTGGCTGCTGCCAAGGCA+CGG | - | chr4.3:49247962-49247981 | MS.gene66639:intron | 65.0% |
! | TGCCACACTGGCTGCTGCCA+AGG | - | chr4.3:49247957-49247976 | MS.gene66639:intron | 65.0% |
!! | TTGGGTTGACCCGAGTGGCC+CGG | + | chr4.3:49251547-49251566 | None:intergenic | 65.0% |
TCAGCCCCACGGTCCCGATC+AGG | + | chr4.3:49248012-49248031 | None:intergenic | 70.0% | |
TGATCGGGACCGTGGGGCTG+AGG | - | chr4.3:49248011-49248030 | MS.gene66639:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 49247289 | 49252472 | 49247289 | ID=MS.gene66639 |
chr4.3 | mRNA | 49247289 | 49252472 | 49247289 | ID=MS.gene66639.t1;Parent=MS.gene66639 |
chr4.3 | exon | 49252426 | 49252472 | 49252426 | ID=MS.gene66639.t1.exon1;Parent=MS.gene66639.t1 |
chr4.3 | CDS | 49252426 | 49252472 | 49252426 | ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1 |
chr4.3 | exon | 49251720 | 49251867 | 49251720 | ID=MS.gene66639.t1.exon2;Parent=MS.gene66639.t1 |
chr4.3 | CDS | 49251720 | 49251867 | 49251720 | ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1 |
chr4.3 | exon | 49251378 | 49251548 | 49251378 | ID=MS.gene66639.t1.exon3;Parent=MS.gene66639.t1 |
chr4.3 | CDS | 49251378 | 49251548 | 49251378 | ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1 |
chr4.3 | exon | 49250578 | 49250816 | 49250578 | ID=MS.gene66639.t1.exon4;Parent=MS.gene66639.t1 |
chr4.3 | CDS | 49250578 | 49250816 | 49250578 | ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1 |
chr4.3 | exon | 49249894 | 49249978 | 49249894 | ID=MS.gene66639.t1.exon5;Parent=MS.gene66639.t1 |
chr4.3 | CDS | 49249894 | 49249978 | 49249894 | ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1 |
chr4.3 | exon | 49249709 | 49249807 | 49249709 | ID=MS.gene66639.t1.exon6;Parent=MS.gene66639.t1 |
chr4.3 | CDS | 49249709 | 49249807 | 49249709 | ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1 |
chr4.3 | exon | 49249261 | 49249362 | 49249261 | ID=MS.gene66639.t1.exon7;Parent=MS.gene66639.t1 |
chr4.3 | CDS | 49249261 | 49249362 | 49249261 | ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1 |
chr4.3 | exon | 49247791 | 49247926 | 49247791 | ID=MS.gene66639.t1.exon8;Parent=MS.gene66639.t1 |
chr4.3 | CDS | 49247791 | 49247926 | 49247791 | ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1 |
chr4.3 | exon | 49247568 | 49247704 | 49247568 | ID=MS.gene66639.t1.exon9;Parent=MS.gene66639.t1 |
chr4.3 | CDS | 49247568 | 49247704 | 49247568 | ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1 |
chr4.3 | exon | 49247289 | 49247372 | 49247289 | ID=MS.gene66639.t1.exon10;Parent=MS.gene66639.t1 |
chr4.3 | CDS | 49247289 | 49247372 | 49247289 | ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1 |
Gene Sequence |
Protein sequence |