AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene66639


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66639.t1 MTR_4g050540 79.600 500 17 4 1 415 500 999 0.0 767
MS.gene66639.t1 MTR_2g087530 76.143 503 32 4 1 415 493 995 0.0 681
MS.gene66639.t1 MTR_2g087530 75.944 503 32 5 1 415 381 882 0.0 672
MS.gene66639.t1 MTR_1g089370 62.592 409 93 5 66 415 472 879 5.42e-161 475
MS.gene66639.t1 MTR_1g079950 39.274 303 119 7 118 367 4 294 8.64e-58 192
MS.gene66639.t1 MTR_1g079950 39.274 303 119 7 118 367 4 294 8.70e-58 192
MS.gene66639.t1 MTR_1g079950 39.145 304 120 7 117 367 3 294 9.10e-58 192
MS.gene66639.t1 MTR_1g079950 39.145 304 120 7 117 367 32 323 9.16e-58 193
MS.gene66639.t1 MTR_5g081230 39.333 300 124 7 118 367 20 311 1.50e-57 191
MS.gene66639.t1 MTR_7g116380 38.944 303 120 7 118 367 4 294 1.77e-57 191
MS.gene66639.t1 MTR_7g116380 38.944 303 120 7 118 367 4 294 1.98e-57 191
MS.gene66639.t1 MTR_7g112870 36.747 332 136 6 117 397 7 315 3.02e-57 191
MS.gene66639.t1 MTR_1g074880 39.189 296 121 7 123 368 9 295 1.10e-56 189
MS.gene66639.t1 MTR_1g074880 39.189 296 121 7 123 368 9 295 1.29e-56 189
MS.gene66639.t1 MTR_8g098980 39.643 280 107 5 139 365 23 293 1.70e-55 186
MS.gene66639.t1 MTR_1g043240 38.255 298 121 7 123 368 9 295 1.64e-53 181
MS.gene66639.t1 MTR_8g005010 38.768 276 107 5 146 368 27 293 2.87e-53 179
MS.gene66639.t1 MTR_1g074880 39.095 243 92 5 176 368 4 240 1.63e-46 161
MS.gene66639.t1 MTR_1g074880 39.095 243 92 5 176 368 4 240 2.23e-46 160
MS.gene66639.t1 MTR_1g079950 39.344 244 86 5 177 367 34 268 1.06e-45 160
MS.gene66639.t1 MTR_8g062430 32.624 282 132 5 147 377 24 298 2.81e-40 145
MS.gene66639.t1 MTR_5g037200 32.270 282 133 5 147 377 24 298 3.82e-39 142
MS.gene66639.t1 MTR_7g107310 34.100 261 108 5 146 352 30 280 3.89e-39 143
MS.gene66639.t1 MTR_5g093990 33.208 265 118 4 146 358 20 277 3.56e-37 137
MS.gene66639.t1 MTR_8g085610 33.333 261 110 5 146 352 25 275 9.36e-37 136
MS.gene66639.t1 MTR_8g085610 33.077 260 110 5 147 352 2 251 1.99e-36 135
MS.gene66639.t1 MTR_1g039380 29.856 278 136 5 133 358 6 276 3.35e-33 127
MS.gene66639.t1 MTR_1g039380 29.961 257 121 5 154 358 3 252 9.02e-31 119
MS.gene66639.t1 MTR_3g452710 31.765 255 107 6 156 352 268 513 1.42e-28 117
MS.gene66639.t1 MTR_3g452710 32.661 248 100 6 163 352 208 446 1.46e-28 117
MS.gene66639.t1 MTR_2g100130 28.519 270 133 6 138 352 101 365 1.47e-28 116
MS.gene66639.t1 MTR_2g100130 28.519 270 133 6 138 352 200 464 2.71e-28 116
MS.gene66639.t1 MTR_2g100130 28.519 270 133 6 138 352 210 474 2.93e-28 116
MS.gene66639.t1 MTR_2g100130 28.519 270 133 6 138 352 210 474 2.98e-28 116
MS.gene66639.t1 MTR_2g100130 28.519 270 133 6 138 352 171 435 7.32e-28 115
MS.gene66639.t1 MTR_2g100130 28.261 276 138 6 138 358 210 480 1.91e-27 114
MS.gene66639.t1 MTR_5g037200 42.063 126 66 2 147 271 24 143 4.57e-27 107
MS.gene66639.t1 MTR_2g100130 28.261 276 138 6 138 358 171 441 7.30e-27 112
MS.gene66639.t1 MTR_2g100130 28.462 260 126 6 138 342 210 464 3.07e-26 110
MS.gene66639.t1 MTR_8g072600 38.583 127 64 3 155 272 105 226 5.32e-19 88.2
MS.gene66639.t1 MTR_8g072600 38.583 127 64 3 155 272 105 226 1.87e-18 87.4
MS.gene66639.t1 MTR_2g100160 37.500 120 66 2 156 271 138 252 1.59e-16 81.3
MS.gene66639.t1 MTR_2g099710 26.280 293 116 10 148 354 211 489 6.83e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66639.t1 AT2G27210 74.802 504 38 5 1 415 503 1006 0.0 699
MS.gene66639.t1 AT2G27210 74.802 504 38 5 1 415 498 1001 0.0 699
MS.gene66639.t1 AT1G08420 74.455 505 39 6 1 415 509 1013 0.0 688
MS.gene66639.t1 AT1G08420 74.455 505 39 6 1 415 514 1018 0.0 688
MS.gene66639.t1 AT4G03080 63.325 409 91 4 66 415 473 881 3.06e-170 499
MS.gene66639.t1 AT1G03445 49.361 391 112 5 69 402 429 790 2.82e-118 363
MS.gene66639.t1 AT1G03445 48.806 377 107 5 69 388 429 776 4.62e-111 344
MS.gene66639.t1 AT5G59160 39.189 296 121 5 123 367 17 304 1.21e-58 194
MS.gene66639.t1 AT5G59160 39.189 296 121 5 123 367 17 304 1.21e-58 194
MS.gene66639.t1 AT5G59160 39.189 296 121 5 123 367 17 304 1.21e-58 194
MS.gene66639.t1 AT2G29400 38.127 299 130 4 118 367 18 310 5.21e-58 192
MS.gene66639.t1 AT2G39840 38.206 301 128 6 117 367 16 308 2.38e-57 191
MS.gene66639.t1 AT5G27840 37.618 319 136 5 114 381 8 314 2.70e-57 191
MS.gene66639.t1 AT5G27840 37.618 319 136 5 114 381 8 314 2.70e-57 191
MS.gene66639.t1 AT5G27840 38.264 311 129 5 114 373 8 306 5.25e-57 190
MS.gene66639.t1 AT5G27840 38.264 311 129 5 114 373 8 306 8.83e-57 190
MS.gene66639.t1 AT3G46820 37.417 302 130 5 118 368 12 305 3.28e-56 188
MS.gene66639.t1 AT3G05580 37.778 315 130 6 119 382 13 312 2.12e-55 186
MS.gene66639.t1 AT1G64040 38.333 300 125 5 117 365 3 293 2.13e-55 186
MS.gene66639.t1 AT4G11240 39.706 272 102 5 147 365 31 293 1.61e-53 181
MS.gene66639.t1 AT5G43380 38.889 270 107 4 147 365 30 292 9.10e-53 179
MS.gene66639.t1 AT5G43380 38.889 270 107 4 147 365 30 292 9.80e-53 179
MS.gene66639.t1 AT5G43380 39.623 265 102 4 147 360 30 287 1.58e-52 179
MS.gene66639.t1 AT1G10430 31.915 282 134 4 147 377 24 298 7.27e-40 144
MS.gene66639.t1 AT1G10430 31.915 282 134 4 147 377 24 298 7.27e-40 144
MS.gene66639.t1 AT1G59830 31.560 282 135 4 147 377 24 298 1.16e-39 144
MS.gene66639.t1 AT3G05580 37.450 251 94 5 119 318 13 251 2.41e-39 142
MS.gene66639.t1 AT1G69960 32.979 282 131 6 147 377 25 299 4.22e-39 142
MS.gene66639.t1 AT4G26720 33.585 265 117 4 146 358 20 277 6.91e-39 142
MS.gene66639.t1 AT3G58500 33.846 260 108 5 147 352 31 280 4.37e-38 140
MS.gene66639.t1 AT5G55260 33.208 265 118 4 146 358 20 277 1.10e-37 139
MS.gene66639.t1 AT2G42500 33.462 260 109 5 147 352 31 280 2.22e-37 138
MS.gene66639.t1 AT3G19980 29.856 278 136 5 133 358 6 276 3.62e-33 126
MS.gene66639.t1 AT1G50370 29.496 278 137 5 133 358 6 276 7.49e-33 125
MS.gene66639.t1 AT5G55260 28.758 306 118 5 146 358 20 318 8.74e-30 118
MS.gene66639.t1 AT1G59830 31.878 229 98 4 147 324 24 245 9.05e-30 116
MS.gene66639.t1 AT2G42810 31.873 251 110 6 157 352 258 502 5.25e-28 116
MS.gene66639.t1 AT2G42810 31.873 251 110 6 157 352 257 501 5.42e-28 116
MS.gene66639.t1 AT2G42810 31.873 251 110 6 157 352 204 448 5.47e-28 115
MS.gene66639.t1 AT2G42810 31.873 251 110 6 157 352 204 448 5.47e-28 115
MS.gene66639.t1 AT2G42810 31.873 251 110 6 157 352 204 448 5.47e-28 115
MS.gene66639.t1 AT2G42500 42.149 121 67 1 146 266 30 147 2.11e-27 107
MS.gene66639.t1 AT2G42500 42.149 121 67 1 146 266 30 147 2.94e-27 107
MS.gene66639.t1 AT2G42500 42.149 121 67 1 146 266 30 147 3.84e-27 107
MS.gene66639.t1 AT2G42500 32.174 230 93 5 177 352 13 233 6.08e-27 108
MS.gene66639.t1 AT5G63870 33.566 143 85 2 135 272 37 174 6.58e-19 87.0
MS.gene66639.t1 AT5G63870 33.566 143 85 2 135 272 37 174 3.39e-18 86.3
MS.gene66639.t1 AT5G63870 33.566 143 85 2 135 272 37 174 3.39e-18 86.3
MS.gene66639.t1 AT1G48120 34.752 141 84 3 135 272 615 750 6.48e-15 77.8
MS.gene66639.t1 AT5G10900 31.469 143 85 4 110 246 159 294 1.45e-13 72.8
MS.gene66639.t1 AT5G10900 31.469 143 85 4 110 246 159 294 1.52e-13 72.8
MS.gene66639.t1 AT5G10900 31.469 143 85 4 110 246 159 294 1.61e-13 72.8

Find 120 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGCAGCAGTTGCACTTTC+TGG 0.074910 4.3:+49251424 None:intergenic
AGGGCACCAATTAAAATATT+TGG 0.147759 4.3:-49250656 MS.gene66639:CDS
TGACGTTCTGGCGAAGTTTC+TGG 0.183902 4.3:+49247590 None:intergenic
AGAGACAAATATACCTTCTT+TGG 0.185188 4.3:+49251364 None:intergenic
GTGATTTACATGGGCAGTTT+GGG 0.211414 4.3:-49250634 MS.gene66639:CDS
GGTCCAGGGTTAGTTACTTT+TGG 0.218224 4.3:-49249262 MS.gene66639:CDS
TGCTGGGGCGATATTAGTTT+TGG 0.237880 4.3:-49247669 MS.gene66639:CDS
CACTGAAAATGCCTTGCTTC+AGG 0.242308 4.3:-49252433 MS.gene66639:CDS
ACTCAATTCGAAAACCAAAA+AGG 0.280052 4.3:+49249723 None:intergenic
AAGTCTTCTGCTTGCTTTGA+AGG 0.285629 4.3:-49249893 MS.gene66639:intron
ATGCGCCTCTTTGACGAGTA+TGG 0.303119 4.3:-49250605 MS.gene66639:CDS
GGTGATTTACATGGGCAGTT+TGG 0.308128 4.3:-49250635 MS.gene66639:CDS
CGTATTAAATGAATATTGTT+TGG 0.311742 4.3:+49249776 None:intergenic
GCAGAAGACTTATAGTTTCC+AGG 0.339335 4.3:+49249905 None:intergenic
CATTAATATCTGCAGCTTCA+TGG 0.365494 4.3:+49249747 None:intergenic
TCCATTCTCTTGCCGTGCCT+TGG 0.370864 4.3:+49251765 None:intergenic
TCCTAGGAGATTATGTTGAT+AGG 0.374773 4.3:-49249939 MS.gene66639:CDS
GGTAATGGATGAATCAGTTT+AGG 0.384582 4.3:+49247626 None:intergenic
AACTGGTGGTTTCCAGCCAC+GGG 0.386044 4.3:+49250772 None:intergenic
GAGACAAATATACCTTCTTT+GGG 0.386185 4.3:+49251365 None:intergenic
GCAGAGACTGGTGGAGCATT+AGG 0.392732 4.3:-49251514 MS.gene66639:CDS
GAAGGCAGACGGGTCAGTTA+TGG 0.394505 4.3:-49251451 MS.gene66639:CDS
TAGCAAAGGAGTTGAGTATC+TGG 0.402168 4.3:-49251839 MS.gene66639:CDS
ACTGAAAATGCCTTGCTTCA+GGG 0.402168 4.3:-49252432 MS.gene66639:CDS
GTATCTTCAATATGACGTTC+TGG 0.409956 4.3:+49247578 None:intergenic
AAGGCAGACGGGTCAGTTAT+GGG 0.415806 4.3:-49251450 MS.gene66639:CDS
ATGACCGTGGTTCGCTGGCT+TGG 0.419614 4.3:-49247295 MS.gene66639:CDS
ATTGATCAGTTTGAAAATGA+AGG 0.423462 4.3:-49251469 MS.gene66639:CDS
CCTAGGAGATTATGTTGATA+GGG 0.424523 4.3:-49249938 MS.gene66639:CDS
ACCTCTTAAAACCCCGTGGC+TGG 0.426692 4.3:-49250784 MS.gene66639:CDS
ATGCCTTGCTTCAGGGGTCT+AGG 0.428340 4.3:-49252425 MS.gene66639:intron
GCCAAGGCACGGCAAGAGAA+TGG 0.432499 4.3:-49251766 MS.gene66639:CDS
CAAAATTCCATTACACGGTC+AGG 0.433952 4.3:+49247904 None:intergenic
CGACCGAATGCTAGAGGTCC+AGG 0.435844 4.3:-49249277 MS.gene66639:CDS
GAGCATTAGGTGGCATGGTT+AGG 0.435993 4.3:-49251501 MS.gene66639:CDS
AAAATATTTGGTGATTTACA+TGG 0.439355 4.3:-49250644 MS.gene66639:CDS
TCAGCCCCACGGTCCCGATC+AGG 0.440492 4.3:+49251730 None:intergenic
GTGGTTATTGCCGCAGAGAC+TGG 0.443202 4.3:-49251526 MS.gene66639:CDS
AATAGTTTGTAGCTGAGAAA+AGG 0.445366 4.3:+49247794 None:intergenic
ACAGCATGAAACGGTTCTAT+AGG 0.455231 4.3:-49249336 MS.gene66639:CDS
GCTATATCACCGGCAGTTGA+TGG 0.459620 4.3:+49250578 None:intergenic
CTGAAAATGCCTTGCTTCAG+GGG 0.460104 4.3:-49252431 MS.gene66639:CDS
GGTGAAAGTGCAGGTGGTAA+TGG 0.462912 4.3:+49247611 None:intergenic
CTGTATGACAGTTGGTTCGC+TGG 0.466427 4.3:+49250682 None:intergenic
CACTGGCTGCTGCCAAGGCA+CGG 0.473002 4.3:-49251777 MS.gene66639:CDS
TGATCGGGACCGTGGGGCTG+AGG 0.474950 4.3:-49251728 MS.gene66639:CDS
AACCAACTGTCATACAGCTT+AGG 0.477320 4.3:-49250676 MS.gene66639:CDS
AGCAAATGACCGTGGTTCGC+TGG 0.482727 4.3:-49247300 MS.gene66639:CDS
TATATCGATTATCTATTCCT+AGG 0.483370 4.3:-49249955 MS.gene66639:CDS
TGCCACACTGGCTGCTGCCA+AGG 0.487318 4.3:-49251782 MS.gene66639:CDS
ATAGGTACTGCAAATAATGC+TGG 0.489726 4.3:-49247686 MS.gene66639:intron
TGATAGGGGCCAACACAGCC+TGG 0.491899 4.3:-49249923 MS.gene66639:CDS
AACCCTGGACCTCTAGCATT+CGG 0.502808 4.3:+49249274 None:intergenic
CCCTATCAACATAATCTCCT+AGG 0.508047 4.3:+49249938 None:intergenic
AGGAGTTGAATCACCTGATC+GGG 0.508379 4.3:-49251743 MS.gene66639:CDS
CGACCTCTAGTTGGTGTTGG+TGG 0.514229 4.3:+49247332 None:intergenic
ACCAACTGTCATACAGCTTA+GGG 0.516291 4.3:-49250675 MS.gene66639:CDS
AATTGAGTGCATTGAGAGGA+TGG 0.519249 4.3:-49249708 MS.gene66639:intron
GAACTGGTGGTTTCCAGCCA+CGG 0.524769 4.3:+49250771 None:intergenic
TAGGTACTGCAAATAATGCT+GGG 0.528832 4.3:-49247685 MS.gene66639:CDS
TATCAATAGTGTCCCAAAGA+AGG 0.529780 4.3:-49251377 MS.gene66639:intron
AATCACCTGATCGGGACCGT+GGG 0.533321 4.3:-49251735 MS.gene66639:CDS
ACAGAGAATGACAGCGTGGA+AGG 0.535847 4.3:-49249304 MS.gene66639:CDS
ATAGTTTGTAGCTGAGAAAA+GGG 0.542289 4.3:+49247795 None:intergenic
TTATAGTTTCCAGGCTGTGT+TGG 0.545135 4.3:+49249914 None:intergenic
TATTGAAGATACCTGGATGC+AGG 0.546581 4.3:-49247567 MS.gene66639:intron
GCCCTAAGCTGTATGACAGT+TGG 0.553062 4.3:+49250674 None:intergenic
TGATTTACATGGGCAGTTTG+GGG 0.553499 4.3:-49250633 MS.gene66639:CDS
GTTGCAGCCTGACCGTGTAA+TGG 0.556995 4.3:-49247911 MS.gene66639:intron
TTTGGGTAGGGATCTTGTGG+TGG 0.559437 4.3:-49247651 MS.gene66639:CDS
ACCCCAAAAGTAACTAACCC+TGG 0.560640 4.3:+49249259 None:intergenic
GAACCACGGTCATTTGCTAC+AGG 0.562198 4.3:+49247305 None:intergenic
TTAAGAATGACAGCATGAAA+CGG 0.563617 4.3:-49249345 MS.gene66639:intron
TGCCTTGGCAGCAGCCAGTG+TGG 0.565287 4.3:+49251780 None:intergenic
AACGTCATATTGAAGATACC+TGG 0.568523 4.3:-49247574 MS.gene66639:CDS
TTGACGGAATACCTGCATCC+AGG 0.569460 4.3:+49247556 None:intergenic
GTTTGAAAATGAAGGCAGAC+GGG 0.571368 4.3:-49251461 MS.gene66639:CDS
TGGTGGAGCATTAGGTGGCA+TGG 0.578886 4.3:-49251506 MS.gene66639:CDS
GAGGAGTTGAATCACCTGAT+CGG 0.581652 4.3:-49251744 MS.gene66639:CDS
CTGCTAGAAAGTTATTAGAT+CGG 0.583835 4.3:-49251408 MS.gene66639:CDS
CTAGGGTAGCCTCAGCCCCA+CGG 0.588762 4.3:+49251719 None:intergenic
AAATATTTGGTGATTTACAT+GGG 0.589386 4.3:-49250643 MS.gene66639:CDS
AACAATATTCATTTAATACG+TGG 0.589704 4.3:-49249773 MS.gene66639:CDS
TATTGCAAAATTCCATTACA+CGG 0.589836 4.3:+49247899 None:intergenic
GCTGGAAACCACCAGTTCGA+CGG 0.590734 4.3:-49250766 MS.gene66639:CDS
TTCTCAGCTACAAACTATTG+CGG 0.593117 4.3:-49247790 MS.gene66639:intron
CTAGGAGATTATGTTGATAG+GGG 0.594858 4.3:-49249937 MS.gene66639:CDS
GAAGTTTCTGGTGAAAGTGC+AGG 0.596639 4.3:+49247602 None:intergenic
GAATCACCTGATCGGGACCG+TGG 0.597024 4.3:-49251736 MS.gene66639:CDS
ACAGGAGGACGACCTCTAGT+TGG 0.601390 4.3:+49247323 None:intergenic
CAGAGAATGACAGCGTGGAA+GGG 0.602329 4.3:-49249303 MS.gene66639:CDS
GGACGACCTCTAGTTGGTGT+TGG 0.603208 4.3:+49247329 None:intergenic
AGTTTGAAAATGAAGGCAGA+CGG 0.607904 4.3:-49251462 MS.gene66639:CDS
GTTATTGCCGCAGAGACTGG+TGG 0.610143 4.3:-49251523 MS.gene66639:CDS
GACCGAATGCTAGAGGTCCA+GGG 0.611385 4.3:-49249276 MS.gene66639:CDS
TCCACGCTGTCATTCTCTGT+AGG 0.611873 4.3:+49249307 None:intergenic
TTCGAATTGAGTGCATTGAG+AGG 0.613732 4.3:-49249712 MS.gene66639:CDS
TATGGTTCACCATCAACTGC+CGG 0.615823 4.3:-49250587 MS.gene66639:CDS
TGAAGCTATCAGTGCCACAC+TGG 0.621819 4.3:-49251794 MS.gene66639:CDS
GCACATGAATGCGTGATGGA+TGG 0.624035 4.3:-49247850 MS.gene66639:CDS
ATACCTAGACCCCTGAAGCA+AGG 0.626170 4.3:+49252422 None:intergenic
GGGCTGCGACCGAATGCTAG+AGG 0.627867 4.3:-49249283 MS.gene66639:CDS
AGGAACTTACGCTATATCAC+CGG 0.628831 4.3:+49250568 None:intergenic
GAGACTGGTGGAGCATTAGG+TGG 0.638450 4.3:-49251511 MS.gene66639:CDS
GTGAACCATACTCGTCAAAG+AGG 0.650621 4.3:+49250600 None:intergenic
TTGAACAGGAGAACTAGCAA+AGG 0.651766 4.3:-49251853 MS.gene66639:intron
TCGTGCACATGAATGCGTGA+TGG 0.660261 4.3:-49247854 MS.gene66639:CDS
CCACGGTCATTTGCTACAGG+AGG 0.670379 4.3:+49247308 None:intergenic
AAGGCACGGCAAGAGAATGG+AGG 0.674733 4.3:-49251763 MS.gene66639:CDS
ATCACCTGATCGGGACCGTG+GGG 0.676953 4.3:-49251734 MS.gene66639:CDS
GTTTCTGGTGAAAGTGCAGG+TGG 0.678650 4.3:+49247605 None:intergenic
ACTGGTGGTTTCCAGCCACG+GGG 0.683656 4.3:+49250773 None:intergenic
AGGTACTGCAAATAATGCTG+GGG 0.686484 4.3:-49247684 MS.gene66639:CDS
AGACCACCAACACCAACTAG+AGG 0.687730 4.3:-49247335 MS.gene66639:CDS
ATATCCAAGCCAGCGAACCA+CGG 0.706438 4.3:+49247291 None:intergenic
CCTCCTGTAGCAAATGACCG+TGG 0.727849 4.3:-49247308 MS.gene66639:CDS
ATCTTTGTGATAGTGCAGAG+AGG 0.731261 4.3:-49250712 MS.gene66639:CDS
GCACACCTCTTAAAACCCCG+TGG 0.733416 4.3:-49250788 MS.gene66639:CDS
TAATGCTCCACCAGTCTCTG+CGG 0.733520 4.3:+49251516 None:intergenic
TCCTACAGAGAATGACAGCG+TGG 0.743451 4.3:-49249308 MS.gene66639:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTATAAATAATTTTTTTTG+GGG - chr4.3:49252354-49252373 MS.gene66639:intron 10.0%
!! GATCAAAATTAATTTCTATT+AGG - chr4.3:49248563-49248582 MS.gene66639:intron 15.0%
!! TAAATAGATATTACATATGA+TGG - chr4.3:49250578-49250597 MS.gene66639:CDS 15.0%
!!! AAAGTTTTTCATATAAATGA+TGG + chr4.3:49247868-49247887 None:intergenic 15.0%
!!! AAATCACCAAATATTTTAAT+TGG + chr4.3:49249092-49249111 None:intergenic 15.0%
!!! TAGTAAATTTTGATTACTAA+GGG - chr4.3:49248127-49248146 MS.gene66639:intron 15.0%
!!! TTATTTTCCCTATTAAATTT+TGG - chr4.3:49252019-49252038 MS.gene66639:intron 15.0%
!! AAAAAAATTATTTGCATGCA+TGG - chr4.3:49250217-49250236 MS.gene66639:intron 20.0%
!! AAAAAAGGAAAAATCTATTG+GGG + chr4.3:49247481-49247500 None:intergenic 20.0%
!! AAAAAATTATTTGCATGCAT+GGG - chr4.3:49250218-49250237 MS.gene66639:intron 20.0%
!! AAATTAGCAAGAGAAAAAAT+TGG + chr4.3:49249745-49249764 None:intergenic 20.0%
!! AACAATATTCATTTAATACG+TGG - chr4.3:49249966-49249985 MS.gene66639:intron 20.0%
!! ACAATCATTAATATATGACA+AGG + chr4.3:49251713-49251732 None:intergenic 20.0%
!! ATCTATTTATATCATTATCC+AGG + chr4.3:49250567-49250586 None:intergenic 20.0%
!! CAAAAAAGGAAAAATCTATT+GGG + chr4.3:49247482-49247501 None:intergenic 20.0%
!! CGTATTAAATGAATATTGTT+TGG + chr4.3:49249966-49249985 None:intergenic 20.0%
!! GAATAAATAGAAGATAAACT+GGG - chr4.3:49251118-49251137 MS.gene66639:intron 20.0%
!! TAGTGAGATAATAAAAACTA+GGG + chr4.3:49247814-49247833 None:intergenic 20.0%
!! TGAATAAATAGAAGATAAAC+TGG - chr4.3:49251117-49251136 MS.gene66639:intron 20.0%
!! TTAATAGGGAAAATAATTGA+AGG + chr4.3:49252015-49252034 None:intergenic 20.0%
!! TTATATGAAAAACTTTGAAC+AGG - chr4.3:49247872-49247891 MS.gene66639:CDS 20.0%
!! TTCATTTAATAGTTAAGCAA+TGG - chr4.3:49248600-49248619 MS.gene66639:intron 20.0%
!! TTTGACATTTAATCTATGAT+GGG - chr4.3:49247710-49247729 MS.gene66639:intron 20.0%
!!! AAAATATTTGGTGATTTACA+TGG - chr4.3:49249095-49249114 MS.gene66639:intron 20.0%
!!! AAATATTTGGTGATTTACAT+GGG - chr4.3:49249096-49249115 MS.gene66639:intron 20.0%
!!! ATAACATTTTGATATCAGAA+AGG + chr4.3:49251803-49251822 None:intergenic 20.0%
!!! ATACATGGTAAAACATTTTA+TGG - chr4.3:49250084-49250103 MS.gene66639:intron 20.0%
!!! ATTTATTCACCCTATTTTTT+TGG + chr4.3:49251106-49251125 None:intergenic 20.0%
!!! GTAGTAAATTTTGATTACTA+AGG - chr4.3:49248126-49248145 MS.gene66639:intron 20.0%
!!! TAGTTTTTATTATCTCACTA+GGG - chr4.3:49247814-49247833 MS.gene66639:CDS 20.0%
!!! TTTTGACATTTAATCTATGA+TGG - chr4.3:49247709-49247728 MS.gene66639:intron 20.0%
! AAAAAGATTGCAAACGATTT+AGG + chr4.3:49250769-49250788 None:intergenic 25.0%
! AAAAAGGAAAAATCTATTGG+GGG + chr4.3:49247480-49247499 None:intergenic 25.0%
! AAAAATTATTTGCATGCATG+GGG - chr4.3:49250219-49250238 MS.gene66639:intron 25.0%
! AAAGGGAATCTTAAAATTAG+AGG + chr4.3:49251654-49251673 None:intergenic 25.0%
! AACATTACATCCATCATAAA+AGG + chr4.3:49251672-49251691 None:intergenic 25.0%
! AATGATAAACACTATTAGAG+AGG + chr4.3:49248503-49248522 None:intergenic 25.0%
! ACACATGCCAAAATTTAATA+GGG + chr4.3:49252029-49252048 None:intergenic 25.0%
! ACATTACATCCATCATAAAA+GGG + chr4.3:49251671-49251690 None:intergenic 25.0%
! ACTTATATAAAACCATCCAT+GGG + chr4.3:49249202-49249221 None:intergenic 25.0%
! ATAATGTGAAAACACATGAT+TGG - chr4.3:49248538-49248557 MS.gene66639:intron 25.0%
! ATACCATCTTAAAATTTGGT+TGG + chr4.3:49251480-49251499 None:intergenic 25.0%
! ATATCATAGTATTCCATGAT+GGG + chr4.3:49249488-49249507 None:intergenic 25.0%
! ATGATAAACACTATTAGAGA+GGG + chr4.3:49248502-49248521 None:intergenic 25.0%
! ATTGATCAGTTTGAAAATGA+AGG - chr4.3:49248270-49248289 MS.gene66639:intron 25.0%
! CATATTACCAAATAACCTAT+TGG + chr4.3:49249287-49249306 None:intergenic 25.0%
! CTAGTGAGATAATAAAAACT+AGG + chr4.3:49247815-49247834 None:intergenic 25.0%
! CTGAAAACAAGTATATAAGT+GGG - chr4.3:49251407-49251426 MS.gene66639:CDS 25.0%
! GCAAAAAAGGAAAAATCTAT+TGG + chr4.3:49247483-49247502 None:intergenic 25.0%
! GGGTTAATACCAAAAAAATA+GGG - chr4.3:49251094-49251113 MS.gene66639:intron 25.0%
! GTGTCCATTTAAATATCTAT+TGG - chr4.3:49247769-49247788 MS.gene66639:intron 25.0%
! TAATGTGAAAACACATGATT+GGG - chr4.3:49248539-49248558 MS.gene66639:intron 25.0%
! TACACTTATAGTTGCAAAAA+AGG + chr4.3:49247496-49247515 None:intergenic 25.0%
! TACCATCTTAAAATTTGGTT+GGG + chr4.3:49251479-49251498 None:intergenic 25.0%
! TACTTATATAAAACCATCCA+TGG + chr4.3:49249203-49249222 None:intergenic 25.0%
! TATATCATAGTATTCCATGA+TGG + chr4.3:49249489-49249508 None:intergenic 25.0%
! TATGATTATGTGAAATTTGC+AGG - chr4.3:49249932-49249951 MS.gene66639:CDS 25.0%
! TATTGCAAAATTCCATTACA+CGG + chr4.3:49251843-49251862 None:intergenic 25.0%
! TCAGCCAATAGATATTTAAA+TGG + chr4.3:49247776-49247795 None:intergenic 25.0%
! TCTCATACCATCTTAAAATT+TGG + chr4.3:49251484-49251503 None:intergenic 25.0%
! TCTGAAAACAAGTATATAAG+TGG - chr4.3:49251406-49251425 MS.gene66639:CDS 25.0%
! TCTTCTATAAACTTGACAAT+AGG - chr4.3:49247631-49247650 MS.gene66639:CDS 25.0%
! TGGGTTAATACCAAAAAAAT+AGG - chr4.3:49251093-49251112 MS.gene66639:intron 25.0%
! TTAAATTTGTGCCATATAAG+AGG - chr4.3:49251746-49251765 MS.gene66639:CDS 25.0%
! TTGTCTATTTGTAGCTTAAA+AGG - chr4.3:49249261-49249280 MS.gene66639:CDS 25.0%
! TTTATTGAATTCATCAAGCT+TGG - chr4.3:49248869-49248888 MS.gene66639:intron 25.0%
!! AAATTTTGTGTGAAGTTCAA+AGG + chr4.3:49247604-49247623 None:intergenic 25.0%
!! AGTTTTTATTATCTCACTAG+GGG - chr4.3:49247815-49247834 MS.gene66639:CDS 25.0%
!! ATATTAAAACTTTTCCTCTC+TGG - chr4.3:49247840-49247859 MS.gene66639:CDS 25.0%
!! ATGGGAAAACATTTTATACA+TGG - chr4.3:49250069-49250088 MS.gene66639:intron 25.0%
!! ATTTAAATATCTATTGGCTG+AGG - chr4.3:49247775-49247794 MS.gene66639:intron 25.0%
!! TATATCGATTATCTATTCCT+AGG - chr4.3:49249784-49249803 MS.gene66639:CDS 25.0%
!! TATTCAAGTACATTTTTGTC+TGG - chr4.3:49248178-49248197 MS.gene66639:intron 25.0%
!! TTTAAATATCTATTGGCTGA+GGG - chr4.3:49247776-49247795 MS.gene66639:intron 25.0%
!! TTTATAAAATGGTTTGCAGT+TGG - chr4.3:49252213-49252232 MS.gene66639:intron 25.0%
!!! AAGTAATGGATAGTTACTTT+GGG - chr4.3:49249218-49249237 MS.gene66639:intron 25.0%
!!! AGTGTGATTTTTGAAATTAG+AGG - chr4.3:49247738-49247757 MS.gene66639:intron 25.0%
!!! ATTTTTTTGGTATTAACCCA+AGG + chr4.3:49251093-49251112 None:intergenic 25.0%
!!! CTAGTTTTTATTATCTCACT+AGG - chr4.3:49247813-49247832 MS.gene66639:CDS 25.0%
!!! GGATGGTTTTATATAAGTAA+TGG - chr4.3:49249204-49249223 MS.gene66639:intron 25.0%
!!! TAAGTAATGGATAGTTACTT+TGG - chr4.3:49249217-49249236 MS.gene66639:intron 25.0%
!!! TAATGTTTGTTGTTAGTTAC+AGG - chr4.3:49251685-49251704 MS.gene66639:intron 25.0%
!!! TATTAAATTTTGGCATGTGT+GGG - chr4.3:49252029-49252048 MS.gene66639:intron 25.0%
!!! TTTAAGATTCCCTTTTATGA+TGG - chr4.3:49251659-49251678 MS.gene66639:intron 25.0%
AAAACAAGTATATAAGTGGG+AGG - chr4.3:49251410-49251429 MS.gene66639:CDS 30.0%
AAAATTATTTGCATGCATGG+GGG - chr4.3:49250220-49250239 MS.gene66639:intron 30.0%
AAGACAAGAATCAGTTAGAT+TGG + chr4.3:49249403-49249422 None:intergenic 30.0%
AAGATATTTGTTTCCCACTA+GGG + chr4.3:49248040-49248059 None:intergenic 30.0%
AATGCTGACATTTCCTTTAA+TGG - chr4.3:49248668-49248687 MS.gene66639:intron 30.0%
AATTAAACAGACGGTTTATC+CGG + chr4.3:49250171-49250190 None:intergenic 30.0%
ACTCAATTCGAAAACCAAAA+AGG + chr4.3:49250019-49250038 None:intergenic 30.0%
AGAATAAATAGAATCCTGAC+TGG - chr4.3:49251005-49251024 MS.gene66639:intron 30.0%
AGAGACAAATATACCTTCTT+TGG + chr4.3:49248378-49248397 None:intergenic 30.0%
AGGTATGAAAAACTCAACAT+CGG + chr4.3:49248821-49248840 None:intergenic 30.0%
AGTTTCTTAACCTTCTATGT+AGG - chr4.3:49248923-49248942 MS.gene66639:intron 30.0%
ATCAGATGCATTATTCTGAT+TGG - chr4.3:49248623-49248642 MS.gene66639:intron 30.0%
ATGGTAAGGAATTTCATACA+TGG - chr4.3:49250050-49250069 MS.gene66639:intron 30.0%
ATGTCAAAAGAAAACCACTT+TGG + chr4.3:49247698-49247717 None:intergenic 30.0%
ATTTAAGTATCTCTCTCTAG+TGG + chr4.3:49247370-49247389 None:intergenic 30.0%
CACAAGTTTAACCTCTTATA+TGG + chr4.3:49251760-49251779 None:intergenic 30.0%
CACACATGCCAAAATTTAAT+AGG + chr4.3:49252030-49252049 None:intergenic 30.0%
CATGTCTTTATACATAGTGT+TGG + chr4.3:49251311-49251330 None:intergenic 30.0%
CTATTGCAAAATACTAGGAT+TGG - chr4.3:49252309-49252328 MS.gene66639:intron 30.0%
CTCAATTCGAAAACCAAAAA+GGG + chr4.3:49250018-49250037 None:intergenic 30.0%
CTGATCTATTGCAAAATACT+AGG - chr4.3:49252304-49252323 MS.gene66639:intron 30.0%
CTGCTAGAAAGTTATTAGAT+CGG - chr4.3:49248331-49248350 MS.gene66639:intron 30.0%
GAAATAAATATGCTCCAAAG+TGG - chr4.3:49247681-49247700 MS.gene66639:CDS 30.0%
GAGAAGTGATTCAACAAAAT+AGG + chr4.3:49248841-49248860 None:intergenic 30.0%
GAGACAAATATACCTTCTTT+GGG + chr4.3:49248377-49248396 None:intergenic 30.0%
GGTTAAACTTGTGTATATTG+TGG - chr4.3:49251767-49251786 MS.gene66639:CDS 30.0%
GTATTGCTTATCAAGTTTGA+TGG - chr4.3:49249896-49249915 MS.gene66639:CDS 30.0%
GTTAATCGTTTGCAATCTTA+AGG - chr4.3:49250906-49250925 MS.gene66639:intron 30.0%
GTTTACATTGTGCTTTGATT+GGG - chr4.3:49249537-49249556 MS.gene66639:intron 30.0%
TAAAAGGCCAATAGGTTATT+TGG - chr4.3:49249277-49249296 MS.gene66639:CDS 30.0%
TAAACTTGTGTATATTGTGG+CGG - chr4.3:49251770-49251789 MS.gene66639:CDS 30.0%
TCATGCTGTCATTCTTAAAA+AGG + chr4.3:49250392-49250411 None:intergenic 30.0%
TCTCTAGTGTCAATTTAGAT+GGG + chr4.3:49250812-49250831 None:intergenic 30.0%
TGGTAAGGAATTTCATACAT+GGG - chr4.3:49250051-49250070 MS.gene66639:intron 30.0%
TGTGCATGTGTATATTTGAT+AGG + chr4.3:49252267-49252286 None:intergenic 30.0%
TGTTTACATTGTGCTTTGAT+TGG - chr4.3:49249536-49249555 MS.gene66639:intron 30.0%
TTAAGAATGACAGCATGAAA+CGG - chr4.3:49250394-49250413 MS.gene66639:intron 30.0%
TTAGAGGAAATATCAAATGC+TGG + chr4.3:49251638-49251657 None:intergenic 30.0%
! AATAGTTTGTAGCTGAGAAA+AGG + chr4.3:49251948-49251967 None:intergenic 30.0%
! AATTTTAAGCAGCACTAAGA+GGG + chr4.3:49252241-49252260 None:intergenic 30.0%
! ACATTTAATCTATGATGGGA+GGG - chr4.3:49247714-49247733 MS.gene66639:intron 30.0%
! AGGGCACCAATTAAAATATT+TGG - chr4.3:49249083-49249102 MS.gene66639:intron 30.0%
! ATAGTTTGTAGCTGAGAAAA+GGG + chr4.3:49251947-49251966 None:intergenic 30.0%
! ATTATATTTGAAGCCATGCT+TGG - chr4.3:49250944-49250963 MS.gene66639:intron 30.0%
! ATTGTAATCTATCGACTATC+AGG - chr4.3:49249426-49249445 MS.gene66639:intron 30.0%
! TCTAGGTATGATAGGTTTTA+CGG - chr4.3:49247331-49247350 MS.gene66639:CDS 30.0%
!! ATAGTGTTGGTGGATAATAT+TGG + chr4.3:49251298-49251317 None:intergenic 30.0%
!! CTATTAAATTTTGGCATGTG+TGG - chr4.3:49252028-49252047 MS.gene66639:intron 30.0%
!! TAGTACAACTCTTTGAAGTT+GGG + chr4.3:49251565-49251584 None:intergenic 30.0%
AAACTTAACCCCTACAAAAC+CGG + chr4.3:49251454-49251473 None:intergenic 35.0%
AACGTCATATTGAAGATACC+TGG - chr4.3:49252165-49252184 MS.gene66639:intron 35.0%
AACTTACTATTGAGTGCAGA+GGG - chr4.3:49248405-49248424 MS.gene66639:intron 35.0%
ACATCACATCTTTCTGATGA+TGG - chr4.3:49248763-49248782 MS.gene66639:intron 35.0%
ACTATTGCGGTATTTGTTCA+CGG - chr4.3:49251962-49251981 MS.gene66639:intron 35.0%
AGAATCAGTTAGATTGGTGA+TGG + chr4.3:49249397-49249416 None:intergenic 35.0%
AGTAGCATCAGTAAATGAGA+AGG + chr4.3:49251608-49251627 None:intergenic 35.0%
AGTTGTTATCAGTCTTACAC+CGG - chr4.3:49251372-49251391 MS.gene66639:intron 35.0%
AGTTTGAAAATGAAGGCAGA+CGG - chr4.3:49248277-49248296 MS.gene66639:intron 35.0%
ATGATTAAACCTGAATCTGG+AGG - chr4.3:49248062-49248081 MS.gene66639:intron 35.0%
CACATTCCATCTTACAACTA+GGG + chr4.3:49247428-49247447 None:intergenic 35.0%
CATCACATCTTTCTGATGAT+GGG - chr4.3:49248764-49248783 MS.gene66639:intron 35.0%
CATTAATATCTGCAGCTTCA+TGG + chr4.3:49249995-49250014 None:intergenic 35.0%
CCTAGGAGATTATGTTGATA+GGG - chr4.3:49249801-49249820 MS.gene66639:intron 35.0%
CTCTCTAGTGTCAATTTAGA+TGG + chr4.3:49250813-49250832 None:intergenic 35.0%
GAAGATATTTGTTTCCCACT+AGG + chr4.3:49248041-49248060 None:intergenic 35.0%
GCTATGAGGCAAGAAAAAAT+TGG + chr4.3:49249681-49249700 None:intergenic 35.0%
GGATAAACCGTCTGTTTAAT+TGG - chr4.3:49250170-49250189 MS.gene66639:intron 35.0%
GTAGCATCAGTAAATGAGAA+GGG + chr4.3:49251607-49251626 None:intergenic 35.0%
GTATCTTCAATATGACGTTC+TGG + chr4.3:49252164-49252183 None:intergenic 35.0%
GTTCCAAGTGATTTATTGAC+CGG + chr4.3:49250252-49250271 None:intergenic 35.0%
TAACTTACTATTGAGTGCAG+AGG - chr4.3:49248404-49248423 MS.gene66639:intron 35.0%
TATCAATAGTGTCCCAAAGA+AGG - chr4.3:49248362-49248381 MS.gene66639:intron 35.0%
TATTCAGCGTCCTATTACAA+TGG - chr4.3:49250282-49250301 MS.gene66639:intron 35.0%
TCAATCTAATCCCAAAAACC+AGG - chr4.3:49251149-49251168 MS.gene66639:intron 35.0%
TCCATGATTAAACCTGAATC+TGG - chr4.3:49248059-49248078 MS.gene66639:intron 35.0%
TCCTAGGAGATTATGTTGAT+AGG - chr4.3:49249800-49249819 MS.gene66639:intron 35.0%
TGTAGTAGAACGACAACAAA+AGG + chr4.3:49248746-49248765 None:intergenic 35.0%
TTCTCAGCTACAAACTATTG+CGG - chr4.3:49251949-49251968 MS.gene66639:intron 35.0%
TTGGTATTAACCCAAGGAAA+GGG + chr4.3:49251087-49251106 None:intergenic 35.0%
TTGTAGCTTAAAAGGCCAAT+AGG - chr4.3:49249269-49249288 MS.gene66639:CDS 35.0%
TTTGGTATTAACCCAAGGAA+AGG + chr4.3:49251088-49251107 None:intergenic 35.0%
! AACATTGTGATTTTCTGCTC+AGG - chr4.3:49250117-49250136 MS.gene66639:intron 35.0%
! ACATTGTGATTTTCTGCTCA+GGG - chr4.3:49250118-49250137 MS.gene66639:intron 35.0%
! ATAGGTACTGCAAATAATGC+TGG - chr4.3:49252053-49252072 MS.gene66639:intron 35.0%
! CAATTTTAAGCAGCACTAAG+AGG + chr4.3:49252242-49252261 None:intergenic 35.0%
! CTAGGAGATTATGTTGATAG+GGG - chr4.3:49249802-49249821 MS.gene66639:intron 35.0%
! GACATTTAATCTATGATGGG+AGG - chr4.3:49247713-49247732 MS.gene66639:intron 35.0%
! GCAGATATTAATGCCCTTTT+TGG - chr4.3:49250002-49250021 MS.gene66639:intron 35.0%
! GTCTTTATACATAGTGTTGG+TGG + chr4.3:49251308-49251327 None:intergenic 35.0%
! TAGGTACTGCAAATAATGCT+GGG - chr4.3:49252054-49252073 MS.gene66639:intron 35.0%
! TCCAGATTCAGGTTTAATCA+TGG + chr4.3:49248063-49248082 None:intergenic 35.0%
! TTAATCAGTTGCATTTTGCC+TGG - chr4.3:49250546-49250565 MS.gene66639:intron 35.0%
! TTTTCAGACCTTATCTCATC+CGG + chr4.3:49251394-49251413 None:intergenic 35.0%
!! GGTAATGGATGAATCAGTTT+AGG + chr4.3:49252116-49252135 None:intergenic 35.0%
!! GTAGTACAACTCTTTGAAGT+TGG + chr4.3:49251566-49251585 None:intergenic 35.0%
!! TCATTTTTCCAAACCAAGCA+TGG + chr4.3:49250960-49250979 None:intergenic 35.0%
!! TGAAGGTACTGTGGATTTAT+AGG - chr4.3:49249863-49249882 MS.gene66639:intron 35.0%
!! TGGTGGAAAATGTTTTCAAG+TGG - chr4.3:49248441-49248460 MS.gene66639:intron 35.0%
!! TTATCAAGTTTGATGGTGTC+AGG - chr4.3:49249903-49249922 MS.gene66639:CDS 35.0%
!! TTGAAGCATCGTTTGATACT+TGG - chr4.3:49250719-49250738 MS.gene66639:CDS 35.0%
!! TTGTGCTGATGGATCTTTTA+TGG - chr4.3:49250317-49250336 MS.gene66639:intron 35.0%
!! TTTTGTCTGGAATGTTTCTC+AGG - chr4.3:49248191-49248210 MS.gene66639:intron 35.0%
!!! TTTTTTGGGGTGTTAATTGC+AGG - chr4.3:49252367-49252386 MS.gene66639:intron 35.0%
AAAACCATCCATGGGAACTA+AGG + chr4.3:49249194-49249213 None:intergenic 40.0%
AACCAACTGTCATACAGCTT+AGG - chr4.3:49249063-49249082 MS.gene66639:intron 40.0%
AAGTCTTCTGCTTGCTTTGA+AGG - chr4.3:49249846-49249865 MS.gene66639:intron 40.0%
AAGTTCAAAGGCCCATTAGT+AGG + chr4.3:49247592-49247611 None:intergenic 40.0%
AATGAAAACCCCCCTACTAA+TGG - chr4.3:49247577-49247596 MS.gene66639:CDS 40.0%
AATTGAGTGCATTGAGAGGA+TGG - chr4.3:49250031-49250050 MS.gene66639:intron 40.0%
ACAGCATGAAACGGTTCTAT+AGG - chr4.3:49250403-49250422 MS.gene66639:intron 40.0%
ACCAACTGTCATACAGCTTA+GGG - chr4.3:49249064-49249083 MS.gene66639:intron 40.0%
ACTGAAAATGCCTTGCTTCA+GGG - chr4.3:49247307-49247326 MS.gene66639:CDS 40.0%
AGAGAGATGGAATTTGGACA+TGG - chr4.3:49250143-49250162 MS.gene66639:intron 40.0%
AGGAACTTACGCTATATCAC+CGG + chr4.3:49249174-49249193 None:intergenic 40.0%
AGTTCAAAGGCCCATTAGTA+GGG + chr4.3:49247591-49247610 None:intergenic 40.0%
ATGAAAACCCCCCTACTAAT+GGG - chr4.3:49247578-49247597 MS.gene66639:CDS 40.0%
ATTTCTGTGACAGTCTGCAT+CGG - chr4.3:49249560-49249579 MS.gene66639:intron 40.0%
CAAAATTCCATTACACGGTC+AGG + chr4.3:49251838-49251857 None:intergenic 40.0%
CAAGAAATGCACTCCACTAA+TGG + chr4.3:49249244-49249263 None:intergenic 40.0%
CCCTATCAACATAATCTCCT+AGG + chr4.3:49249804-49249823 None:intergenic 40.0%
GAGGAAGCCAATTAAACAGA+CGG + chr4.3:49250180-49250199 None:intergenic 40.0%
GATCCTGCTTCCATTGTAAT+AGG + chr4.3:49250295-49250314 None:intergenic 40.0%
GCACATTCCATCTTACAACT+AGG + chr4.3:49247429-49247448 None:intergenic 40.0%
GCAGAAGACTTATAGTTTCC+AGG + chr4.3:49249837-49249856 None:intergenic 40.0%
GGAATGCATGCAATGCATAT+CGG + chr4.3:49249467-49249486 None:intergenic 40.0%
GTAGAACGACAACAAAAGGA+AGG + chr4.3:49248742-49248761 None:intergenic 40.0%
GTGATTTACATGGGCAGTTT+GGG - chr4.3:49249105-49249124 MS.gene66639:intron 40.0%
GTTTGAAAATGAAGGCAGAC+GGG - chr4.3:49248278-49248297 MS.gene66639:intron 40.0%
TAGCAAAGGAGTTGAGTATC+TGG - chr4.3:49247900-49247919 MS.gene66639:CDS 40.0%
TATTGAAGATACCTGGATGC+AGG - chr4.3:49252172-49252191 MS.gene66639:intron 40.0%
TCCATCTTACAACTAGGGAA+AGG + chr4.3:49247423-49247442 None:intergenic 40.0%
TCCTTTAATGGCTCAGCAAT+GGG - chr4.3:49248680-49248699 MS.gene66639:intron 40.0%
TCCTTTCCCTAGTTGTAAGA+TGG - chr4.3:49247419-49247438 MS.gene66639:intron 40.0%
TCTGTTGATCTGATAGTCGA+TGG - chr4.3:49249636-49249655 MS.gene66639:intron 40.0%
TGATTTACATGGGCAGTTTG+GGG - chr4.3:49249106-49249125 MS.gene66639:intron 40.0%
TGCAAACGATTAACCCACTT+GGG + chr4.3:49250900-49250919 None:intergenic 40.0%
TGGTATTAACCCAAGGAAAG+GGG + chr4.3:49251086-49251105 None:intergenic 40.0%
TGTGCTATGACCTACATAGA+AGG + chr4.3:49248936-49248955 None:intergenic 40.0%
TTACATCCTAATGCGCTATG+AGG + chr4.3:49249695-49249714 None:intergenic 40.0%
TTATAGTTTCCAGGCTGTGT+TGG + chr4.3:49249828-49249847 None:intergenic 40.0%
TTCCTTTAATGGCTCAGCAA+TGG - chr4.3:49248679-49248698 MS.gene66639:intron 40.0%
TTCGAATTGAGTGCATTGAG+AGG - chr4.3:49250027-49250046 MS.gene66639:intron 40.0%
TTCTCAATTAGAGCTGCAAG+AGG + chr4.3:49250199-49250218 None:intergenic 40.0%
TTGAACAGGAGAACTAGCAA+AGG - chr4.3:49247886-49247905 MS.gene66639:CDS 40.0%
TTGCAAACGATTAACCCACT+TGG + chr4.3:49250901-49250920 None:intergenic 40.0%
TTTGATCTGTGTGTACAGCT+AGG + chr4.3:49251258-49251277 None:intergenic 40.0%
! AGGTACTGCAAATAATGCTG+GGG - chr4.3:49252055-49252074 MS.gene66639:intron 40.0%
! ATCCTGACTGGAACAGTTTT+TGG - chr4.3:49251017-49251036 MS.gene66639:intron 40.0%
! ATCTTTGTGATAGTGCAGAG+AGG - chr4.3:49249027-49249046 MS.gene66639:intron 40.0%
! ATTTGAAGCCATGCTTGGTT+TGG - chr4.3:49250949-49250968 MS.gene66639:intron 40.0%
! TAGTTACTTTGGGCCATTAG+TGG - chr4.3:49249228-49249247 MS.gene66639:intron 40.0%
! TATAAATGATGGAGCCAGAG+AGG + chr4.3:49247857-49247876 None:intergenic 40.0%
!! AGATTATGGCTCCTGGTTTT+TGG + chr4.3:49251163-49251182 None:intergenic 40.0%
!! ATTTTGGCATGTGTGGGAAT+AGG - chr4.3:49252035-49252054 MS.gene66639:intron 40.0%
!! GATTATGGCTCCTGGTTTTT+GGG + chr4.3:49251162-49251181 None:intergenic 40.0%
!! GGCCCAACCAAATTTTAAGA+TGG - chr4.3:49251474-49251493 MS.gene66639:CDS 40.0%
!! GGTTTTGTAGGGGTTAAGTT+TGG - chr4.3:49251453-49251472 MS.gene66639:CDS 40.0%
!!! GGCGATATTAGTTTTGGGTA+GGG - chr4.3:49252076-49252095 MS.gene66639:intron 40.0%
!!! GTCCAGGGTTAGTTACTTTT+GGG - chr4.3:49250478-49250497 MS.gene66639:intron 40.0%
!!! TCCAGGGTTAGTTACTTTTG+GGG - chr4.3:49250479-49250498 MS.gene66639:intron 40.0%
AACGATTAACCCACTTGGGT+TGG + chr4.3:49250896-49250915 None:intergenic 45.0%
AAGAAAAACTGCCGTCGAAC+TGG + chr4.3:49248987-49249006 None:intergenic 45.0%
ACCCATTGCTGAGCCATTAA+AGG + chr4.3:49248684-49248703 None:intergenic 45.0%
ACCCCAAAAGTAACTAACCC+TGG + chr4.3:49250483-49250502 None:intergenic 45.0%
AGCAAGTGGTCCAATTGGAT+AGG + chr4.3:49251508-49251527 None:intergenic 45.0%
AGCAGGATCAATTGTGCTGA+TGG - chr4.3:49250306-49250325 MS.gene66639:intron 45.0%
AGCCTGATTCCACCAGAATT+TGG + chr4.3:49248089-49248108 None:intergenic 45.0%
AGGAGTTGAATCACCTGATC+GGG - chr4.3:49247996-49248015 MS.gene66639:intron 45.0%
AGGGTGAGAGAGATGGAATT+TGG - chr4.3:49250137-49250156 MS.gene66639:intron 45.0%
AGGGTGCATATAACTGATGG+TGG - chr4.3:49248424-49248443 MS.gene66639:intron 45.0%
AGTGCATTGAGAGGATGGTA+AGG - chr4.3:49250036-49250055 MS.gene66639:intron 45.0%
AGTTCCTTAGTTCCCATGGA+TGG - chr4.3:49249187-49249206 MS.gene66639:intron 45.0%
ATGGAATTTGGACATGGCAC+CGG - chr4.3:49250149-49250168 MS.gene66639:intron 45.0%
CACTGAAAATGCCTTGCTTC+AGG - chr4.3:49247306-49247325 MS.gene66639:CDS 45.0%
CAGATTCAGGACAACACACT+CGG + chr4.3:49248796-49248815 None:intergenic 45.0%
CATGCAATGCATATCGGTGA+TGG + chr4.3:49249461-49249480 None:intergenic 45.0%
CATTGCATGCATTCCCATCA+TGG - chr4.3:49249472-49249491 MS.gene66639:intron 45.0%
CGTAAGTTCCTTAGTTCCCA+TGG - chr4.3:49249183-49249202 MS.gene66639:intron 45.0%
CGTCCTATTACAATGGAAGC+AGG - chr4.3:49250289-49250308 MS.gene66639:intron 45.0%
CTGAAAATGCCTTGCTTCAG+GGG - chr4.3:49247308-49247327 MS.gene66639:CDS 45.0%
GAGGAGTTGAATCACCTGAT+CGG - chr4.3:49247995-49248014 MS.gene66639:intron 45.0%
GCAGGAGGTAACAAACTAAG+TGG + chr4.3:49249375-49249394 None:intergenic 45.0%
GCCTGATTCCACCAGAATTT+GGG + chr4.3:49248088-49248107 None:intergenic 45.0%
GGTATGAGAGCCTATCCAAT+TGG - chr4.3:49251495-49251514 MS.gene66639:CDS 45.0%
GGTGATTTACATGGGCAGTT+TGG - chr4.3:49249104-49249123 MS.gene66639:intron 45.0%
GTCCAAAAACTGTTCCAGTC+AGG + chr4.3:49251022-49251041 None:intergenic 45.0%
GTCTTACACCGGATGAGATA+AGG - chr4.3:49251383-49251402 MS.gene66639:CDS 45.0%
GTGAACCATACTCGTCAAAG+AGG + chr4.3:49249142-49249161 None:intergenic 45.0%
GTTCAAAGGCCCATTAGTAG+GGG + chr4.3:49247590-49247609 None:intergenic 45.0%
TAATCACGAGTTCGGTCAGT+AGG + chr4.3:49251057-49251076 None:intergenic 45.0%
TATGGTTCACCATCAACTGC+CGG - chr4.3:49249152-49249171 MS.gene66639:intron 45.0%
TGGCCGGTCAATAAATCACT+TGG - chr4.3:49250246-49250265 MS.gene66639:intron 45.0%
TTCAAAGGCCCATTAGTAGG+GGG + chr4.3:49247589-49247608 None:intergenic 45.0%
TTCAGGGGTCTAGGTATGAT+AGG - chr4.3:49247323-49247342 MS.gene66639:CDS 45.0%
TTCTTGCCTCATAGCGCATT+AGG - chr4.3:49249686-49249705 MS.gene66639:intron 45.0%
! AGTTCGACGGCAGTTTTTCT+TGG - chr4.3:49248986-49249005 MS.gene66639:intron 45.0%
! ATTTGCATGCATGGGGGTAT+TGG - chr4.3:49250226-49250245 MS.gene66639:intron 45.0%
! CAATTGGACCACTTGCTACT+GGG - chr4.3:49251511-49251530 MS.gene66639:CDS 45.0%
! CAGAGGGTGCATATAACTGA+TGG - chr4.3:49248421-49248440 MS.gene66639:intron 45.0%
! TGTCTGGAATGTTTCTCAGG+TGG - chr4.3:49248194-49248213 MS.gene66639:intron 45.0%
!! GAAGTTTCTGGTGAAAGTGC+AGG + chr4.3:49252140-49252159 None:intergenic 45.0%
!! TCAGTTAGATTGGTGATGGC+AGG + chr4.3:49249393-49249412 None:intergenic 45.0%
!! TGCTGGGGCGATATTAGTTT+TGG - chr4.3:49252070-49252089 MS.gene66639:intron 45.0%
!! TGCTTGCTTTGAAGGTACTG+TGG - chr4.3:49249854-49249873 MS.gene66639:intron 45.0%
!!! AGTTTTGGGTAGGGATCTTG+TGG - chr4.3:49252085-49252104 MS.gene66639:intron 45.0%
!!! GCTGGGGCGATATTAGTTTT+GGG - chr4.3:49252071-49252090 MS.gene66639:intron 45.0%
!!! GGGCGATATTAGTTTTGGGT+AGG - chr4.3:49252075-49252094 MS.gene66639:intron 45.0%
!!! GGTCCAGGGTTAGTTACTTT+TGG - chr4.3:49250477-49250496 MS.gene66639:intron 45.0%
!!! TGTTTTTAGCGCACAGACTG+AGG + chr4.3:49251186-49251205 None:intergenic 45.0%
!!! TCAAATATTTTTTTATAAAA+TGG - chr4.3:49252202-49252221 MS.gene66639:intron 5.0%
!!! TGTTATAAATAATTTTTTTT+GGG - chr4.3:49252353-49252372 MS.gene66639:intron 5.0%
!!! TTGTTATAAATAATTTTTTT+TGG - chr4.3:49252352-49252371 MS.gene66639:intron 5.0%
!!! TTTTATAAAAAAATATTTGA+CGG + chr4.3:49252202-49252221 None:intergenic 5.0%
AAAAACTGCCGTCGAACTGG+TGG + chr4.3:49248984-49249003 None:intergenic 50.0%
AACCCTGGACCTCTAGCATT+CGG + chr4.3:49250468-49250487 None:intergenic 50.0%
AAGGCAGACGGGTCAGTTAT+GGG - chr4.3:49248289-49248308 MS.gene66639:intron 50.0%
ACAGAGAATGACAGCGTGGA+AGG - chr4.3:49250435-49250454 MS.gene66639:intron 50.0%
ACTGAGGAGATTATGGCTCC+TGG + chr4.3:49251170-49251189 None:intergenic 50.0%
AGACCACCAACACCAACTAG+AGG - chr4.3:49252404-49252423 MS.gene66639:intron 50.0%
ATACCTAGACCCCTGAAGCA+AGG + chr4.3:49247320-49247339 None:intergenic 50.0%
ATATCCAAGCCAGCGAACCA+CGG + chr4.3:49252451-49252470 None:intergenic 50.0%
ATGCGCCTCTTTGACGAGTA+TGG - chr4.3:49249134-49249153 MS.gene66639:intron 50.0%
ATTACCTAGGCCCCTTTCCT+TGG - chr4.3:49251073-49251092 MS.gene66639:intron 50.0%
CAGAGAATGACAGCGTGGAA+GGG - chr4.3:49250436-49250455 MS.gene66639:intron 50.0%
CCAGTAGCAAGTGGTCCAAT+TGG + chr4.3:49251513-49251532 None:intergenic 50.0%
CGAGTGTGTTGTCCTGAATC+TGG - chr4.3:49248794-49248813 MS.gene66639:intron 50.0%
CGCACAGACTGAGGAGATTA+TGG + chr4.3:49251177-49251196 None:intergenic 50.0%
CTAGCAGCAGTTGCACTTTC+TGG + chr4.3:49248318-49248337 None:intergenic 50.0%
CTCAACATCGGACCAGATTC+AGG + chr4.3:49248809-49248828 None:intergenic 50.0%
GAATCGAACCTGAGACCTCA+AGG - chr4.3:49250832-49250851 MS.gene66639:intron 50.0%
GAATCTGGAGGCCCAAATTC+TGG - chr4.3:49248074-49248093 MS.gene66639:intron 50.0%
GAATTTGGGCCTCCAGATTC+AGG + chr4.3:49248074-49248093 None:intergenic 50.0%
GACCGAACTCGTGATTACCT+AGG - chr4.3:49251060-49251079 MS.gene66639:intron 50.0%
GAGCATTAGGTGGCATGGTT+AGG - chr4.3:49248238-49248257 MS.gene66639:intron 50.0%
GCCCAAATTCTGGTGGAATC+AGG - chr4.3:49248084-49248103 MS.gene66639:intron 50.0%
GCCCTAAGCTGTATGACAGT+TGG + chr4.3:49249068-49249087 None:intergenic 50.0%
GCTATATCACCGGCAGTTGA+TGG + chr4.3:49249164-49249183 None:intergenic 50.0%
GGCCTAGGTAATCACGAGTT+CGG + chr4.3:49251065-49251084 None:intergenic 50.0%
TAATGCTCCACCAGTCTCTG+CGG + chr4.3:49248226-49248245 None:intergenic 50.0%
TAATGGCTCAGCAATGGGTC+AGG - chr4.3:49248685-49248704 MS.gene66639:intron 50.0%
TCAAAGGCCCATTAGTAGGG+GGG + chr4.3:49247588-49247607 None:intergenic 50.0%
TCCACGCTGTCATTCTCTGT+AGG + chr4.3:49250435-49250454 None:intergenic 50.0%
TCCTACAGAGAATGACAGCG+TGG - chr4.3:49250431-49250450 MS.gene66639:intron 50.0%
TCGTGCACATGAATGCGTGA+TGG - chr4.3:49251885-49251904 MS.gene66639:intron 50.0%
TGAAGCTATCAGTGCCACAC+TGG - chr4.3:49247945-49247964 MS.gene66639:intron 50.0%
TGACGTTCTGGCGAAGTTTC+TGG + chr4.3:49252152-49252171 None:intergenic 50.0%
TTACCTAGGCCCCTTTCCTT+GGG - chr4.3:49251074-49251093 MS.gene66639:intron 50.0%
TTGACGGAATACCTGCATCC+AGG + chr4.3:49252186-49252205 None:intergenic 50.0%
TTTGGGTAGGGATCTTGTGG+TGG - chr4.3:49252088-49252107 MS.gene66639:intron 50.0%
! CCAATTGGACCACTTGCTAC+TGG - chr4.3:49251510-49251529 MS.gene66639:CDS 50.0%
! GAACCACGGTCATTTGCTAC+AGG + chr4.3:49252437-49252456 None:intergenic 50.0%
! GCACATGAATGCGTGATGGA+TGG - chr4.3:49251889-49251908 MS.gene66639:intron 50.0%
! GGTGAAAGTGCAGGTGGTAA+TGG + chr4.3:49252131-49252150 None:intergenic 50.0%
! TTGGCCTAGTGCTATTGGCT+TGG + chr4.3:49250877-49250896 None:intergenic 50.0%
!! AAAACCGGCTTGTAGGGTGA+AGG + chr4.3:49251439-49251458 None:intergenic 50.0%
!! AAACCGGCTTGTAGGGTGAA+GGG + chr4.3:49251438-49251457 None:intergenic 50.0%
!! ACCCTACAAGCCGGTTTTGT+AGG - chr4.3:49251441-49251460 MS.gene66639:CDS 50.0%
!! CCCTACAAAACCGGCTTGTA+GGG + chr4.3:49251445-49251464 None:intergenic 50.0%
!! CCCTACAAGCCGGTTTTGTA+GGG - chr4.3:49251442-49251461 MS.gene66639:CDS 50.0%
!! CCTACAAGCCGGTTTTGTAG+GGG - chr4.3:49251443-49251462 MS.gene66639:CDS 50.0%
!! CTGTATGACAGTTGGTTCGC+TGG + chr4.3:49249060-49249079 None:intergenic 50.0%
!! GTTAGATTGGTGATGGCAGG+AGG + chr4.3:49249390-49249409 None:intergenic 50.0%
!! GTTTCTGGTGAAAGTGCAGG+TGG + chr4.3:49252137-49252156 None:intergenic 50.0%
!! TGGCCTAGTGCTATTGGCTT+GGG + chr4.3:49250876-49250895 None:intergenic 50.0%
!! TTGGGTTGGCCTAGTGCTAT+TGG + chr4.3:49250882-49250901 None:intergenic 50.0%
!!! GGCTTTGAGCGTTTTGCTCA+GGG - chr4.3:49251910-49251929 MS.gene66639:intron 50.0%
!!! TGGCTTTGAGCGTTTTGCTC+AGG - chr4.3:49251909-49251928 MS.gene66639:intron 50.0%
AACTGGTGGTTTCCAGCCAC+GGG + chr4.3:49248970-49248989 None:intergenic 55.0%
AAGGCACGGCAAGAGAATGG+AGG - chr4.3:49247976-49247995 MS.gene66639:intron 55.0%
AATCACCTGATCGGGACCGT+GGG - chr4.3:49248004-49248023 MS.gene66639:intron 55.0%
ACAGGAGGACGACCTCTAGT+TGG + chr4.3:49252419-49252438 None:intergenic 55.0%
ACCTCTTAAAACCCCGTGGC+TGG - chr4.3:49248955-49248974 MS.gene66639:intron 55.0%
AGCAAATGACCGTGGTTCGC+TGG - chr4.3:49252439-49252458 MS.gene66639:CDS 55.0%
AGCACTAGGCCAACCCAAGT+GGG - chr4.3:49250884-49250903 MS.gene66639:intron 55.0%
ATGCCTTGCTTCAGGGGTCT+AGG - chr4.3:49247314-49247333 MS.gene66639:CDS 55.0%
CCTCCTGTAGCAAATGACCG+TGG - chr4.3:49252431-49252450 MS.gene66639:CDS 55.0%
CTACTGGGTCTCTTGCTACC+GGG - chr4.3:49251526-49251545 MS.gene66639:CDS 55.0%
GAACTGGTGGTTTCCAGCCA+CGG + chr4.3:49248971-49248990 None:intergenic 55.0%
GAAGGCAGACGGGTCAGTTA+TGG - chr4.3:49248288-49248307 MS.gene66639:intron 55.0%
GACCGAATGCTAGAGGTCCA+GGG - chr4.3:49250463-49250482 MS.gene66639:intron 55.0%
GCAAGAGACCCAGTAGCAAG+TGG + chr4.3:49251522-49251541 None:intergenic 55.0%
GCACACCTCTTAAAACCCCG+TGG - chr4.3:49248951-49248970 MS.gene66639:intron 55.0%
GCTACTGGGTCTCTTGCTAC+CGG - chr4.3:49251525-49251544 MS.gene66639:CDS 55.0%
GCTGGAAACCACCAGTTCGA+CGG - chr4.3:49248973-49248992 MS.gene66639:intron 55.0%
GGTCCCAAGCCAATAGCACT+AGG - chr4.3:49250870-49250889 MS.gene66639:intron 55.0%
GTGGTTATTGCCGCAGAGAC+TGG - chr4.3:49248213-49248232 MS.gene66639:intron 55.0%
GTTATTGCCGCAGAGACTGG+TGG - chr4.3:49248216-49248235 MS.gene66639:intron 55.0%
GTTGCAGCCTGACCGTGTAA+TGG - chr4.3:49251828-49251847 MS.gene66639:CDS 55.0%
TAACCCAAGGAAAGGGGCCT+AGG + chr4.3:49251080-49251099 None:intergenic 55.0%
TAGCACTAGGCCAACCCAAG+TGG - chr4.3:49250883-49250902 MS.gene66639:intron 55.0%
TCCATTCTCTTGCCGTGCCT+TGG + chr4.3:49247977-49247996 None:intergenic 55.0%
TCGAACCTGAGACCTCAAGG+AGG - chr4.3:49250835-49250854 MS.gene66639:intron 55.0%
TCTGCTCAGGGTGAGAGAGA+TGG - chr4.3:49250130-49250149 MS.gene66639:intron 55.0%
TCTGGAGGCCCAAATTCTGG+TGG - chr4.3:49248077-49248096 MS.gene66639:intron 55.0%
! CCACGGTCATTTGCTACAGG+AGG + chr4.3:49252434-49252453 None:intergenic 55.0%
! GAGACTGGTGGAGCATTAGG+TGG - chr4.3:49248228-49248247 MS.gene66639:intron 55.0%
! GCAGAGACTGGTGGAGCATT+AGG - chr4.3:49248225-49248244 MS.gene66639:intron 55.0%
! GGACGACCTCTAGTTGGTGT+TGG + chr4.3:49252413-49252432 None:intergenic 55.0%
! TGGTGGAGCATTAGGTGGCA+TGG - chr4.3:49248233-49248252 MS.gene66639:intron 55.0%
!! AGTGCTATTGGCTTGGGACC+TGG + chr4.3:49250870-49250889 None:intergenic 55.0%
!! CCCCTACAAAACCGGCTTGT+AGG + chr4.3:49251446-49251465 None:intergenic 55.0%
!! CGACCTCTAGTTGGTGTTGG+TGG + chr4.3:49252410-49252429 None:intergenic 55.0%
!! GTGCTATTGGCTTGGGACCT+GGG + chr4.3:49250869-49250888 None:intergenic 55.0%
!! TGAAGTTGGGTTGACCCGAG+TGG + chr4.3:49251552-49251571 None:intergenic 55.0%
!!! TCCAGCCACGGGGTTTTAAG+AGG + chr4.3:49248959-49248978 None:intergenic 55.0%
ACTGGTGGTTTCCAGCCACG+GGG + chr4.3:49248969-49248988 None:intergenic 60.0%
ATCACCTGATCGGGACCGTG+GGG - chr4.3:49248005-49248024 MS.gene66639:intron 60.0%
CGACCGAATGCTAGAGGTCC+AGG - chr4.3:49250462-49250481 MS.gene66639:intron 60.0%
GAATCACCTGATCGGGACCG+TGG - chr4.3:49248003-49248022 MS.gene66639:intron 60.0%
GCACCCTTCACCCTACAAGC+CGG - chr4.3:49251432-49251451 MS.gene66639:CDS 60.0%
GCCAAGGCACGGCAAGAGAA+TGG - chr4.3:49247973-49247992 MS.gene66639:intron 60.0%
GTGCTCCTCCTTGAGGTCTC+AGG + chr4.3:49250843-49250862 None:intergenic 60.0%
TCTCTTGCTACCGGGCCACT+CGG - chr4.3:49251534-49251553 MS.gene66639:intron 60.0%
TGATAGGGGCCAACACAGCC+TGG - chr4.3:49249816-49249835 MS.gene66639:intron 60.0%
! ATGACCGTGGTTCGCTGGCT+TGG - chr4.3:49252444-49252463 MS.gene66639:CDS 60.0%
! TCAAGGAGGAGCACACTCCC+AGG - chr4.3:49250849-49250868 MS.gene66639:intron 60.0%
! TGGGAGTGTGCTCCTCCTTG+AGG + chr4.3:49250850-49250869 None:intergenic 60.0%
!! GCATGCATGGGGGTATTGGC+CGG - chr4.3:49250230-49250249 MS.gene66639:intron 60.0%
CTAGGGTAGCCTCAGCCCCA+CGG + chr4.3:49248023-49248042 None:intergenic 65.0%
CTCTTGCTACCGGGCCACTC+GGG - chr4.3:49251535-49251554 MS.gene66639:intron 65.0%
GGGCTGCGACCGAATGCTAG+AGG - chr4.3:49250456-49250475 MS.gene66639:intron 65.0%
GGGGCTGAGGCTACCCTAGT+GGG - chr4.3:49248024-49248043 MS.gene66639:intron 65.0%
TGCCTTGGCAGCAGCCAGTG+TGG + chr4.3:49247962-49247981 None:intergenic 65.0%
TGGGGCTGAGGCTACCCTAG+TGG - chr4.3:49248023-49248042 MS.gene66639:intron 65.0%
! CACTGGCTGCTGCCAAGGCA+CGG - chr4.3:49247962-49247981 MS.gene66639:intron 65.0%
! TGCCACACTGGCTGCTGCCA+AGG - chr4.3:49247957-49247976 MS.gene66639:intron 65.0%
!! TTGGGTTGACCCGAGTGGCC+CGG + chr4.3:49251547-49251566 None:intergenic 65.0%
TCAGCCCCACGGTCCCGATC+AGG + chr4.3:49248012-49248031 None:intergenic 70.0%
TGATCGGGACCGTGGGGCTG+AGG - chr4.3:49248011-49248030 MS.gene66639:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 49247289 49252472 49247289 ID=MS.gene66639
chr4.3 mRNA 49247289 49252472 49247289 ID=MS.gene66639.t1;Parent=MS.gene66639
chr4.3 exon 49252426 49252472 49252426 ID=MS.gene66639.t1.exon1;Parent=MS.gene66639.t1
chr4.3 CDS 49252426 49252472 49252426 ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1
chr4.3 exon 49251720 49251867 49251720 ID=MS.gene66639.t1.exon2;Parent=MS.gene66639.t1
chr4.3 CDS 49251720 49251867 49251720 ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1
chr4.3 exon 49251378 49251548 49251378 ID=MS.gene66639.t1.exon3;Parent=MS.gene66639.t1
chr4.3 CDS 49251378 49251548 49251378 ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1
chr4.3 exon 49250578 49250816 49250578 ID=MS.gene66639.t1.exon4;Parent=MS.gene66639.t1
chr4.3 CDS 49250578 49250816 49250578 ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1
chr4.3 exon 49249894 49249978 49249894 ID=MS.gene66639.t1.exon5;Parent=MS.gene66639.t1
chr4.3 CDS 49249894 49249978 49249894 ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1
chr4.3 exon 49249709 49249807 49249709 ID=MS.gene66639.t1.exon6;Parent=MS.gene66639.t1
chr4.3 CDS 49249709 49249807 49249709 ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1
chr4.3 exon 49249261 49249362 49249261 ID=MS.gene66639.t1.exon7;Parent=MS.gene66639.t1
chr4.3 CDS 49249261 49249362 49249261 ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1
chr4.3 exon 49247791 49247926 49247791 ID=MS.gene66639.t1.exon8;Parent=MS.gene66639.t1
chr4.3 CDS 49247791 49247926 49247791 ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1
chr4.3 exon 49247568 49247704 49247568 ID=MS.gene66639.t1.exon9;Parent=MS.gene66639.t1
chr4.3 CDS 49247568 49247704 49247568 ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1
chr4.3 exon 49247289 49247372 49247289 ID=MS.gene66639.t1.exon10;Parent=MS.gene66639.t1
chr4.3 CDS 49247289 49247372 49247289 ID=cds.MS.gene66639.t1;Parent=MS.gene66639.t1
Gene Sequence

>MS.gene66639

ATGTATACTGATATCAGCACTGAAAATGCCTTGCTTCAGGGGTCTAGGTATGATAGGTTTTACGGTAATTACACTCTACCACTAGAGAGAGATACTTAAATTATACATCATATTATGATTTTAATTATAATCCTTTCCCTAGTTGTAAGATGGAATGTGCTTCACTTTAGTACATATAATGCAATAAACCCCCAATAGATTTTTCCTTTTTTGCAACTATAAGTGTAATTAGCAACTAATTGTGAAAACTTTATCATTGATTTTAGTAATTTAAATTATGAAATGACAAATGAAAACCCCCCTACTAATGGGCCTTTGAACTTCACACAAAATTTTCTTTTATCTTCTATAAACTTGACAATAGGAGTGCAAATTATACTGAAAGTCAGAGAGAAATAAATATGCTCCAAAGTGGTTTTCTTTTGACATTTAATCTATGATGGGAGGGAAGTGTGATTTTTGAAATTAGAGGAGAGAGTAGTGTCCATTTAAATATCTATTGGCTGAGGGAAGTACAGTTTTCCCTAGTTTTTATTATCTCACTAGGGGAAATATTAAAACTTTTCCTCTCTGGCTCCATCATTTATATGAAAAACTTTGAACAGGAGAACTAGCAAAGGAGTTGAGTATCTGGTTGAAGCATCTGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCCAAGGCACGGCAAGAGAATGGAGGAGTTGAATCACCTGATCGGGACCGTGGGGCTGAGGCTACCCTAGTGGGAAACAAATATCTTCCATGATTAAACCTGAATCTGGAGGCCCAAATTCTGGTGGAATCAGGCTGCATCACAGAGCTGTGAGTAGTAAATTTTGATTACTAAGGGAAATATCTACTGTCAAGTTTTCATGATATATTCAAGTACATTTTTGTCTGGAATGTTTCTCAGGTGGTTATTGCCGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGGCAGCTTTCAATTGATCAGTTTGAAAATGAAGGCAGACGGGTCAGTTATGGGACTCCAGAAAGTGCAACTGCTGCTAGAAAGTTATTAGATCGGCAGATGTCTATCAATAGTGTCCCAAAGAAGGTATATTTGTCTCTAATAACTAACTTACTATTGAGTGCAGAGGGTGCATATAACTGATGGTGGAAAATGTTTTCAAGTGGCTATAACATGTACTGTCATTTCATTAAATATTTCACCCTCTCTAATAGTGTTTATCATTGTCAAACTCAATTAAATAATGTGAAAACACATGATTGGGTGATCAAAATTAATTTCTATTAGGAAAGTTATATACATTTCATTTAATAGTTAAGCAATGGATCAGATGCATTATTCTGATTGGTTTTAAACAACACAAATTATTTAATGCTGACATTTCCTTTAATGGCTCAGCAATGGGTCAGGTGCAGAACATCTGATAAGTTATGTTCATTAACCTTCCTTTTGTTGTCGTTCTACTACATCACATCTTTCTGATGATGGGTATAATCCGAGTGTGTTGTCCTGAATCTGGTCCGATGTTGAGTTTTTCATACCTATTTTGTTGAATCACTTCTCATACTTATTTTATTGAATTCATCAAGCTTGGCTTCATTTTATGCTCAGCTTGTTTCTAATTAAGTTTCTTAACCTTCTATGTAGGTCATAGCACACCTCTTAAAACCCCGTGGCTGGAAACCACCAGTTCGACGGCAGTTTTTCTTGGATTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAGAGGATATTTTCCAGCGAACCAACTGTCATACAGCTTAGGGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTGATGCGCCTCTTTGACGAGTATGGTTCACCATCAACTGCCGGTGATATAGCGTAAGTTCCTTAGTTCCCATGGATGGTTTTATATAAGTAATGGATAGTTACTTTGGGCCATTAGTGGAGTGCATTTCTTGTCTATTTGTAGCTTAAAAGGCCAATAGGTTATTTGGTAATATGTCTAAGCATGCTTATTAATGTATCAAGATGTCAAAACGACAGCTTGCATTATTTAATTCGTTGTGCCACTTAGTTTGTTACCTCCTGCCATCACCAATCTAACTGATTCTTGTCTTTGCATTGTAATCTATCGACTATCAGGTATCAATTGCCATCACCGATATGCATTGCATGCATTCCCATCATGGAATACTATGATATAAATCTTTTTCTTTTTTAGTTTTTTTTTTGTTTACATTGTGCTTTGATTGGGATTTCTGTGACAGTCTGCATCGGATAACAATATGATATATTGTGAGATTTAGTGCATAAAAACGAAAAAAAATTCATCTGTTGATCTGATAGTCGATGGTTAGAATAAAATAATGATGCCAATTTTTTCTTGCCTCATAGCGCATTAGGATGTAAATTGCATAATTATAACTATGTATGCATCCAATTTTTTCTCTTGCTAATTTTGTGTTAATGACAATCAGATATATCGATTATCTATTCCTAGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATAAGTCTTCTGCTTGCTTTGAAGGTACTGTGGATTTATAGGCTGTTTCTTTGTATTGCTTATCAAGTTTGATGGTGTCAGGTTTATGTATGATTATGTGAAATTTGCAGGTTGAGTATCCAAACAATATTCATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTTCGAATTGAGTGCATTGAGAGGATGGTAAGGAATTTCATACATGGGAAAACATTTTATACATGGTAAAACATTTTATGGATACTGAAGCAACATTGTGATTTTCTGCTCAGGGTGAGAGAGATGGAATTTGGACATGGCACCGGATAAACCGTCTGTTTAATTGGCTTCCTCTTGCAGCTCTAATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGCCGGTCAATAAATCACTTGGAACAAATCGAGAATATTCAGCGTCCTATTACAATGGAAGCAGGATCAATTGTGCTGATGGATCTTTTATGGTTAGTGCATTTCTATGCTCTTGCATGTTGATGATAATTTATTTTCACAACCTTTTTAAGAATGACAGCATGAAACGGTTCTATAGGTCTGATCCTACAGAGAATGACAGCGTGGAAGGGCTGCGACCGAATGCTAGAGGTCCAGGGTTAGTTACTTTTGGGGTGAGTGATTTTTACTTGCTTATTTTGCAAATGATTATTATTTTATTAATCAGTTGCATTTTGCCTGGATAATGATATAAATAGATATTACATATGATGGTAAGTATTTTGATACTGATTCATACAATTTATTTGATTGAATTTATGAACATAGAATGCTCATGTACTGATTTTTTCTTCATTCTAGAAATTATATTGATTGATTTGTGTACTGAGTTTTGAAGCATCGTTTGATACTTGGAGATCAATTGTACAATATTTATGTCCTAAATCGTTTGCAATCTTTTTTTTTGAAGAAGCTAAATTAGCCCATCTAAATTGACACTAGAGAGAATCGAACCTGAGACCTCAAGGAGGAGCACACTCCCAGGTCCCAAGCCAATAGCACTAGGCCAACCCAAGTGGGTTAATCGTTTGCAATCTTAAGGCACATCTGTTAGACAATTATATTTGAAGCCATGCTTGGTTTGGAAAAATGATTTACATTTATTTACAACTGATTACAGAATAAATAGAATCCTGACTGGAACAGTTTTTGGACAAACTTTTCTTACCTACTGACCGAACTCGTGATTACCTAGGCCCCTTTCCTTGGGTTAATACCAAAAAAATAGGGTGAATAAATAGAAGATAAACTGGGTCTGAACATCAATCTAATCCCAAAAACCAGGAGCCATAATCTCCTCAGTCTGTGCGCTAAAAACAGAAAAAAAGAAAATAATACACTTGAGCTTATTAAAACAAATTGTTAATGCCTAGCTGTACACACAGATCAAATGATTTTCATTTTTTCACCAATATTATCCACCAACACTATGTATAAAGACATGAAGTACGAAAGAAAACAAAGCTGATTATTTCATCTATTTGTAGTTGTTATCAGTCTTACACCGGATGAGATAAGGTCTGAAAACAAGTATATAAGTGGGAGGCACCCTTCACCCTACAAGCCGGTTTTGTAGGGGTTAAGTTTGGCCCAACCAAATTTTAAGATGGTATGAGAGCCTATCCAATTGGACCACTTGCTACTGGGTCTCTTGCTACCGGGCCACTCGGGTCAACCCAACTTCAAAGAGTTGTACTACATTTATGACTCATATATTCCCTTCTCATTTACTGATGCTACTGTCATTGCCAGCATTTGATATTTCCTCTAATTTTAAGATTCCCTTTTATGATGGATGTAATGTTTGTTGTTAGTTACAGGCGCCTTGTCATATATTAATGATTGTACTTTTTTGAATATTAAATTTGTGCCATATAAGAGGTTAAACTTGTGTATATTGTGGCGGTATTATGCCTTTCTGATATCAAAATGTTATCTGCTGTTGCAGCCTGACCGTGTAATGGAATTTTGCAATAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGCGTGATGGATGGCTTTGAGCGTTTTGCTCAGGGACATTTAATCACCCTTTTCTCAGCTACAAACTATTGCGGTATTTGTTCACGGCTTGTACTTTGTACATTTCACATCTCTCCTTCAATTATTTTCCCTATTAAATTTTGGCATGTGTGGGAATAGGTACTGCAAATAATGCTGGGGCGATATTAGTTTTGGGTAGGGATCTTGTGGTGGTTCCTAAACTGATTCATCCATTACCACCTGCACTTTCACCAGAAACTTCGCCAGAACGTCATATTGAAGATACCTGGATGCAGGTATTCCGTCAAATATTTTTTTATAAAATGGTTTGCAGTTGGCACCCTCTTAGTGCTGCTTAAAATTGCACCTATCAAATATACACATGCACATCTAAGTAAATTTCGAACTGATCTATTGCAAAATACTAGGATTGGACTTTCTCTTTGCACTTTATTTGTTATAAATAATTTTTTTTGGGGTGTTAATTGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGTCGTCCTCCTGTAGCAAATGACCGTGGTTCGCTGGCTTGGATATAG

Protein sequence

>MS.gene66639.t1

MYTDISTENALLQGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGGVESPDRDRGAEATLVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVIQLRAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNIHLIRGNHEAADINALFGFRIECIERMNDSMKRFYRSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSPETSPERHIEDTWMQELNANRPPTPTRGRPPVANDRGSLAWI