Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68028.t1 | XP_003612115.1 | 93.5 | 709 | 44 | 1 | 1 | 709 | 1 | 707 | 0.00E+00 | 1354.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68028.t1 | Q9SD34 | 42.6 | 230 | 118 | 5 | 10 | 229 | 44 | 269 | 2.3e-43 | 178.7 |
| MS.gene68028.t1 | Q9SD34 | 26.1 | 257 | 144 | 8 | 234 | 484 | 636 | 852 | 2.6e-10 | 68.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68028.t1 | G7KGD1 | 93.5 | 709 | 44 | 1 | 1 | 709 | 1 | 707 | 0.0e+00 | 1354.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene68028 | 0.813731 | 2.21E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene68028 | 0.816424 | 5.57E-52 | -1.69E-46 |
| MS.gene050213 | MS.gene68028 | 0.821122 | 4.78E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene68028 | 0.836865 | 7.28E-57 | -1.69E-46 |
| MS.gene050646 | MS.gene68028 | 0.814753 | 1.31E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene68028 | 0.820446 | 6.83E-53 | -1.69E-46 |
| MS.gene050669 | MS.gene68028 | 0.821127 | 4.76E-53 | -1.69E-46 |
| MS.gene050759 | MS.gene68028 | 0.808103 | 3.65E-50 | -1.69E-46 |
| MS.gene050962 | MS.gene68028 | 0.80522 | 1.48E-49 | -1.69E-46 |
| MS.gene051226 | MS.gene68028 | 0.822504 | 2.29E-53 | -1.69E-46 |
| MS.gene051821 | MS.gene68028 | 0.806934 | 6.46E-50 | -1.69E-46 |
| MS.gene051823 | MS.gene68028 | 0.826041 | 3.37E-54 | -1.69E-46 |
| MS.gene052016 | MS.gene68028 | 0.904562 | 1.08E-79 | -1.69E-46 |
| MS.gene052118 | MS.gene68028 | 0.816575 | 5.15E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene68028 | 0.804727 | 1.88E-49 | -1.69E-46 |
| MS.gene053620 | MS.gene68028 | 0.859154 | 5.03E-63 | -1.69E-46 |
| MS.gene053726 | MS.gene68028 | 0.800424 | 1.45E-48 | -1.69E-46 |
| MS.gene054178 | MS.gene68028 | 0.839072 | 1.97E-57 | -1.69E-46 |
| MS.gene054617 | MS.gene68028 | 0.811344 | 7.34E-51 | -1.69E-46 |
| MS.gene054892 | MS.gene68028 | 0.873455 | 1.45E-67 | -1.69E-46 |
| MS.gene054893 | MS.gene68028 | 0.873547 | 1.35E-67 | -1.69E-46 |
| MS.gene057155 | MS.gene68028 | 0.811532 | 6.68E-51 | -1.69E-46 |
| MS.gene057422 | MS.gene68028 | 0.802647 | 5.08E-49 | -1.69E-46 |
| MS.gene057622 | MS.gene68028 | 0.811974 | 5.35E-51 | -1.69E-46 |
| MS.gene058429 | MS.gene68028 | 0.801948 | 7.08E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene68028 | 0.801086 | 1.06E-48 | -1.69E-46 |
| MS.gene060259 | MS.gene68028 | 0.819964 | 8.81E-53 | -1.69E-46 |
| MS.gene060413 | MS.gene68028 | 0.815431 | 9.28E-52 | -1.69E-46 |
| MS.gene060522 | MS.gene68028 | 0.834336 | 3.18E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene68028 | 0.803712 | 3.06E-49 | -1.69E-46 |
| MS.gene060964 | MS.gene68028 | 0.804451 | 2.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68028.t1 | MTR_5g021450 | 95.910 | 709 | 27 | 1 | 1 | 709 | 1 | 707 | 0.0 | 1369 |
| MS.gene68028.t1 | MTR_5g021450 | 91.961 | 709 | 28 | 2 | 1 | 709 | 1 | 680 | 0.0 | 1296 |
| MS.gene68028.t1 | MTR_5g021500 | 65.236 | 233 | 73 | 5 | 33 | 262 | 60 | 287 | 1.65e-91 | 311 |
| MS.gene68028.t1 | MTR_5g021500 | 41.667 | 504 | 192 | 11 | 251 | 696 | 650 | 1109 | 1.14e-83 | 288 |
| MS.gene68028.t1 | MTR_3g117490 | 58.696 | 184 | 74 | 2 | 63 | 245 | 220 | 402 | 1.10e-67 | 243 |
| MS.gene68028.t1 | MTR_3g117490 | 59.649 | 57 | 23 | 0 | 336 | 392 | 917 | 973 | 2.34e-14 | 77.8 |
| MS.gene68028.t1 | MTR_3g064280 | 36.184 | 152 | 90 | 3 | 71 | 218 | 15 | 163 | 4.93e-23 | 105 |
| MS.gene68028.t1 | MTR_3g064270 | 35.526 | 152 | 91 | 3 | 71 | 218 | 15 | 163 | 7.19e-23 | 104 |
| MS.gene68028.t1 | MTR_3g064250 | 34.839 | 155 | 94 | 3 | 65 | 215 | 9 | 160 | 9.92e-23 | 104 |
| MS.gene68028.t1 | MTR_3g064300 | 42.857 | 112 | 61 | 2 | 65 | 174 | 7 | 117 | 2.94e-22 | 97.8 |
| MS.gene68028.t1 | MTR_3g064260 | 36.184 | 152 | 90 | 3 | 71 | 218 | 15 | 163 | 2.96e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68028.t1 | AT2G18090 | 60.000 | 175 | 67 | 2 | 62 | 234 | 70 | 243 | 7.08e-72 | 249 |
| MS.gene68028.t1 | AT2G18090 | 40.777 | 103 | 47 | 3 | 336 | 433 | 458 | 551 | 1.21e-11 | 68.6 |
| MS.gene68028.t1 | AT2G18090 | 60.000 | 175 | 67 | 2 | 62 | 234 | 70 | 243 | 1.10e-71 | 249 |
| MS.gene68028.t1 | AT2G18090 | 55.769 | 52 | 23 | 0 | 336 | 387 | 458 | 509 | 2.46e-11 | 67.8 |
| MS.gene68028.t1 | AT3G51120 | 51.515 | 231 | 96 | 6 | 10 | 229 | 44 | 269 | 2.57e-67 | 241 |
| MS.gene68028.t1 | AT3G51120 | 47.436 | 78 | 38 | 1 | 324 | 398 | 716 | 793 | 2.95e-14 | 77.4 |
| MS.gene68028.t1 | AT2G16485 | 53.631 | 179 | 80 | 3 | 70 | 247 | 598 | 774 | 3.28e-57 | 212 |
| MS.gene68028.t1 | AT2G16485 | 50.909 | 55 | 27 | 0 | 334 | 388 | 1292 | 1346 | 1.77e-11 | 68.6 |
| MS.gene68028.t1 | AT2G16485 | 53.631 | 179 | 80 | 3 | 70 | 247 | 598 | 774 | 3.58e-57 | 211 |
| MS.gene68028.t1 | AT2G16485 | 50.909 | 55 | 27 | 0 | 334 | 388 | 1307 | 1361 | 1.76e-11 | 68.6 |
| MS.gene68028.t1 | AT5G63700 | 35.849 | 159 | 93 | 4 | 74 | 226 | 25 | 180 | 1.37e-25 | 112 |
| MS.gene68028.t1 | AT5G63700 | 35.849 | 159 | 93 | 4 | 74 | 226 | 25 | 180 | 1.99e-25 | 111 |
Find 192 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGAAGTGAATGGAAATT+TGG | 0.118164 | 5.3:-12320155 | MS.gene68028:CDS |
| CATAATCAGCAAACTATATC+TGG | 0.196965 | 5.3:-12319749 | MS.gene68028:CDS |
| TGAGCGGCAATGATACATTT+TGG | 0.197931 | 5.3:+12320587 | None:intergenic |
| TGATTCAGTTTCAAATCTTT+TGG | 0.228594 | 5.3:-12319993 | MS.gene68028:CDS |
| CCCTTAGCCTTCTTGTTTAT+AGG | 0.232558 | 5.3:+12321000 | None:intergenic |
| TGACAAGAAATTTCACATTT+AGG | 0.235639 | 5.3:+12320283 | None:intergenic |
| CTCCTTTCCCAGGTATTTGC+TGG | 0.263713 | 5.3:-12319545 | MS.gene68028:CDS |
| CCTCGCTCTGCTTGACAATC+TGG | 0.265321 | 5.3:+12320461 | None:intergenic |
| CAGATTCATCTGTACCATTA+GGG | 0.289928 | 5.3:+12320410 | None:intergenic |
| TCACCTCCGGTGACCGGAAT+TGG | 0.295953 | 5.3:+12323119 | None:intergenic |
| CAACTGTGAACAACAGTCTT+TGG | 0.297579 | 5.3:-12320566 | MS.gene68028:CDS |
| CATCCCTTGCACAAGGAATA+TGG | 0.304040 | 5.3:+12321480 | None:intergenic |
| CTTTAAGATGATGACGCTTC+CGG | 0.306685 | 5.3:+12321073 | None:intergenic |
| TTGGAAGTGAATGGAAATTT+GGG | 0.307833 | 5.3:-12320154 | MS.gene68028:CDS |
| GTATGCTTCATTTGCTTTGA+TGG | 0.312007 | 5.3:-12322951 | MS.gene68028:CDS |
| ACAGATTCATCTGTACCATT+AGG | 0.319043 | 5.3:+12320409 | None:intergenic |
| GAACAGTGCCCAAGGAATTA+AGG | 0.342151 | 5.3:-12321373 | MS.gene68028:intron |
| GAGAATCCGGGGCAATCTTC+TGG | 0.344732 | 5.3:-12320064 | MS.gene68028:CDS |
| ACAGCCAGTTTGGCATTATC+AGG | 0.350770 | 5.3:-12320764 | MS.gene68028:CDS |
| CACAGCAACGACATACTAAA+AGG | 0.351524 | 5.3:+12320718 | None:intergenic |
| TCTCTCCAGATCTCAGAATA+TGG | 0.356724 | 5.3:-12320672 | MS.gene68028:CDS |
| AGACCATTACCTTAATTCCT+TGG | 0.360246 | 5.3:+12321364 | None:intergenic |
| GGAATTGGAGGTGGAATTAC+CGG | 0.365038 | 5.3:+12323134 | None:intergenic |
| ATCAATGATGGCACTGATGC+AGG | 0.365231 | 5.3:-12320856 | MS.gene68028:CDS |
| TTTAAGATGATGACGCTTCC+GGG | 0.365840 | 5.3:+12321074 | None:intergenic |
| TGGATGATGGCAGCACTCTT+TGG | 0.372356 | 5.3:-12320034 | MS.gene68028:CDS |
| CCCATGGAAATTGATGAGTT+TGG | 0.376010 | 5.3:+12319520 | None:intergenic |
| CAGGGATGGAACAGCCAGTT+TGG | 0.377541 | 5.3:-12320774 | MS.gene68028:CDS |
| AACTGTGAACAACAGTCTTT+GGG | 0.383075 | 5.3:-12320565 | MS.gene68028:CDS |
| TCATCGTTGCTTCACTCTAC+AGG | 0.389729 | 5.3:-12320793 | MS.gene68028:CDS |
| GGTAATTCCACCTCCAATTC+CGG | 0.395388 | 5.3:-12323132 | MS.gene68028:CDS |
| CCTTTACCTGCATCAAAATC+TGG | 0.396203 | 5.3:+12319857 | None:intergenic |
| GGCAATCTTCTGGTCAGAAC+TGG | 0.396564 | 5.3:-12320054 | MS.gene68028:CDS |
| TCCTTCGGCTTCTTCACAAC+CGG | 0.406432 | 5.3:+12322984 | None:intergenic |
| GACCATTACCTTAATTCCTT+GGG | 0.410068 | 5.3:+12321365 | None:intergenic |
| AGAAGGCTAAGGGAAATGTT+TGG | 0.415137 | 5.3:-12320990 | MS.gene68028:CDS |
| CATACATCTTCTTCATCCTT+CGG | 0.416063 | 5.3:+12322969 | None:intergenic |
| ATCCGACATTGAAGAGAATC+CGG | 0.417257 | 5.3:-12320077 | MS.gene68028:CDS |
| TGGCATTATCAGGATCCAAC+TGG | 0.422939 | 5.3:-12320754 | MS.gene68028:CDS |
| CACATTTAGCTCACAGGTAG+TGG | 0.423134 | 5.3:+12320924 | None:intergenic |
| ACCCTCCATATTCTGAGATC+TGG | 0.425115 | 5.3:+12320667 | None:intergenic |
| GATCCAACTGGGAAGGTTCA+TGG | 0.426904 | 5.3:-12320742 | MS.gene68028:CDS |
| GAAGGCTAAGGGAAATGTTT+GGG | 0.432087 | 5.3:-12320989 | MS.gene68028:CDS |
| GGTCACCGGAGGTGAATTTA+CGG | 0.433119 | 5.3:-12323111 | MS.gene68028:CDS |
| TGCACATCTGCTTGCTGAAA+CGG | 0.437547 | 5.3:+12319770 | None:intergenic |
| GTTTGGTTCCAGCAAATACC+TGG | 0.442053 | 5.3:+12319537 | None:intergenic |
| TATGTGCAGGCTCCTTTCCC+AGG | 0.444452 | 5.3:-12319555 | MS.gene68028:intron |
| CCACCCACCGATTCAGAAAC+CGG | 0.448120 | 5.3:-12323153 | MS.gene68028:CDS |
| ATTTCCATTTCTCAGCTAAA+CGG | 0.448596 | 5.3:+12322729 | None:intergenic |
| GGTTCCAATGGGTCTTCTGA+GGG | 0.448819 | 5.3:-12320133 | MS.gene68028:CDS |
| GGAATTACCGGTTTCTGAAT+CGG | 0.449437 | 5.3:+12323146 | None:intergenic |
| TACTGTTCATGTTCATGCTC+CGG | 0.454195 | 5.3:-12323003 | MS.gene68028:CDS |
| CTTAAAGTTGACACTGGTTG+TGG | 0.455952 | 5.3:-12321057 | MS.gene68028:CDS |
| GGATCCTGATAATGCCAAAC+TGG | 0.456226 | 5.3:+12320760 | None:intergenic |
| ATCTACTATACAGGAATTCT+CGG | 0.459300 | 5.3:+12321032 | None:intergenic |
| CACTTGTTCTATGTGATCAT+CGG | 0.460519 | 5.3:-12322923 | MS.gene68028:intron |
| ACTATTTGAATCTACTATAC+AGG | 0.461919 | 5.3:+12321023 | None:intergenic |
| CCCCGGATTCTCTTCAATGT+CGG | 0.462369 | 5.3:+12320075 | None:intergenic |
| GGGTTCCAATGGGTCTTCTG+AGG | 0.463383 | 5.3:-12320134 | MS.gene68028:CDS |
| TCTGAGGGTCCGAGTAATAG+TGG | 0.465669 | 5.3:-12320118 | MS.gene68028:CDS |
| GTTTCAAGACTAGGAGAGTC+TGG | 0.467881 | 5.3:-12320832 | MS.gene68028:CDS |
| AAATGTTTGGGACAGTGTCT+TGG | 0.472814 | 5.3:-12320977 | MS.gene68028:CDS |
| GGTGATGCTCTGAGCTCCTC+AGG | 0.475026 | 5.3:-12319836 | MS.gene68028:CDS |
| GGAAAATAAAGAAAATAGTC+AGG | 0.478338 | 5.3:-12320527 | MS.gene68028:CDS |
| CAAGCAGAGCGAGGAAGAAA+AGG | 0.480349 | 5.3:-12320452 | MS.gene68028:CDS |
| CGAAATGAATACTAATGAAT+CGG | 0.480617 | 5.3:-12320881 | MS.gene68028:CDS |
| TTCTCATCAAAGGCAGTTGA+AGG | 0.484294 | 5.3:+12320232 | None:intergenic |
| AAAATAGTCATTAGTGAAGA+AGG | 0.484940 | 5.3:+12319472 | None:intergenic |
| GTCATTCAAATTCTCATCAA+AGG | 0.485039 | 5.3:+12320222 | None:intergenic |
| CGGAACCTTCCGCCGAAGAG+TGG | 0.485800 | 5.3:-12319937 | MS.gene68028:CDS |
| GACAGTGTCTTGGACGGTGT+TGG | 0.488955 | 5.3:-12320967 | MS.gene68028:CDS |
| TCCGACATTGAAGAGAATCC+GGG | 0.491196 | 5.3:-12320076 | MS.gene68028:CDS |
| CACATCAATATCCCACTCTT+CGG | 0.493275 | 5.3:+12319925 | None:intergenic |
| ATAATCAGCAAACTATATCT+GGG | 0.493948 | 5.3:-12319748 | MS.gene68028:CDS |
| GCTATAACTGATTGTTTACA+AGG | 0.495168 | 5.3:-12319890 | MS.gene68028:CDS |
| TCCTATAAACAAGAAGGCTA+AGG | 0.495961 | 5.3:-12321001 | MS.gene68028:CDS |
| GTAAATTCACCTCCGGTGAC+CGG | 0.501037 | 5.3:+12323113 | None:intergenic |
| ACCAAACTCATCAATTTCCA+TGG | 0.504868 | 5.3:-12319521 | MS.gene68028:CDS |
| CCTCCGGTGACCGGAATTGG+AGG | 0.506169 | 5.3:+12323122 | None:intergenic |
| AATGGAAATTTGGGTTCCAA+TGG | 0.512272 | 5.3:-12320145 | MS.gene68028:CDS |
| TGAACATGAACAGTACCTTT+CGG | 0.514543 | 5.3:+12323011 | None:intergenic |
| TTGTCCTAAGGCGTATCATC+CGG | 0.517465 | 5.3:-12322780 | MS.gene68028:CDS |
| GGTAGTGCAAGGTGTACGTC+GGG | 0.517896 | 5.3:+12320253 | None:intergenic |
| CGGTTGCTCATTTGCTACAG+TGG | 0.521421 | 5.3:+12319790 | None:intergenic |
| CATCGTTGCTTCACTCTACA+GGG | 0.522838 | 5.3:-12320792 | MS.gene68028:CDS |
| ATGGAAATTTGGGTTCCAAT+GGG | 0.523751 | 5.3:-12320144 | MS.gene68028:CDS |
| TTTGGATGCAGTAGCGGCGG+AGG | 0.526604 | 5.3:-12319975 | MS.gene68028:CDS |
| AATGAATCGGCAATCAATGA+TGG | 0.530611 | 5.3:-12320868 | MS.gene68028:CDS |
| TCAATGATGGCACTGATGCA+GGG | 0.532158 | 5.3:-12320855 | MS.gene68028:CDS |
| CCTTCCACCACTTCATCAGA+AGG | 0.532926 | 5.3:+12320196 | None:intergenic |
| CCTATAAACAAGAAGGCTAA+GGG | 0.533302 | 5.3:-12321000 | MS.gene68028:CDS |
| TTCTGACCAGAAGATTGCCC+CGG | 0.533652 | 5.3:+12320058 | None:intergenic |
| CCGGTGACCGGAATTGGAGG+TGG | 0.534965 | 5.3:+12323125 | None:intergenic |
| AACTTACGAGGTGGACCCCA+TGG | 0.535838 | 5.3:+12319504 | None:intergenic |
| GTGTACTGGTTGTACTTGAA+AGG | 0.537125 | 5.3:-12321183 | MS.gene68028:CDS |
| TGCTGTTCGTGCGAGTTGCA+AGG | 0.542742 | 5.3:-12321106 | MS.gene68028:CDS |
| CCACCTCCAATTCCGGTCAC+CGG | 0.545856 | 5.3:-12323125 | MS.gene68028:CDS |
| AGTGTCTTGGACGGTGTTGG+AGG | 0.546056 | 5.3:-12320964 | MS.gene68028:CDS |
| TTTGGGAGCCAATGTTACAT+TGG | 0.547021 | 5.3:-12320548 | MS.gene68028:CDS |
| TTCTGGTCAGAACTGGATGA+TGG | 0.548380 | 5.3:-12320047 | MS.gene68028:CDS |
| TCACTTTGCCCACTATTACT+CGG | 0.553393 | 5.3:+12320109 | None:intergenic |
| AAATGTGAAATTTCTTGTCA+TGG | 0.555258 | 5.3:-12320280 | MS.gene68028:CDS |
| GCAGATGGGAATATCAGTGA+TGG | 0.557781 | 5.3:-12320340 | MS.gene68028:CDS |
| ATATCCCACTCTTCGGCGGA+AGG | 0.557902 | 5.3:+12319932 | None:intergenic |
| GCACGAACAGCACCTTTCCA+AGG | 0.558666 | 5.3:+12321117 | None:intergenic |
| GATGAAGTGGTGGAAGGTCA+TGG | 0.560027 | 5.3:-12320190 | MS.gene68028:CDS |
| GCAGAGCGAGGAAGAAAAGG+TGG | 0.561088 | 5.3:-12320449 | MS.gene68028:CDS |
| CCAAACTCATCAATTTCCAT+GGG | 0.564845 | 5.3:-12319520 | MS.gene68028:CDS |
| ATTACCGGTTTCTGAATCGG+TGG | 0.566267 | 5.3:+12323149 | None:intergenic |
| TGTATTCACATTTAGCTCAC+AGG | 0.568532 | 5.3:+12320918 | None:intergenic |
| TGCTTCATTTGCTTTGATGG+TGG | 0.571881 | 5.3:-12322948 | MS.gene68028:CDS |
| AAATAGTCCTATAAACAAGA+AGG | 0.573367 | 5.3:-12321007 | MS.gene68028:CDS |
| GATATTGATGTGTTCACTGA+TGG | 0.573671 | 5.3:-12319914 | MS.gene68028:CDS |
| TGGCATCTATGTAGCGATTG+TGG | 0.573894 | 5.3:-12321534 | MS.gene68028:CDS |
| AATAAAGAAAATAGTCAGGA+TGG | 0.574172 | 5.3:-12320523 | MS.gene68028:CDS |
| TCTGAACATACTCCGATGAT+CGG | 0.575445 | 5.3:-12323086 | MS.gene68028:CDS |
| CTTGCACAAGGAATATGGAC+AGG | 0.580161 | 5.3:+12321485 | None:intergenic |
| GATGAATCTGTTAAGAGCAA+CGG | 0.581049 | 5.3:-12320397 | MS.gene68028:CDS |
| GGCATTATCAGGATCCAACT+GGG | 0.585946 | 5.3:-12320753 | MS.gene68028:CDS |
| GTTTGTGCGGAGCATGCTTG+AGG | 0.586691 | 5.3:-12321413 | MS.gene68028:CDS |
| GGACCATGAACCTTCCCAGT+TGG | 0.586869 | 5.3:+12320739 | None:intergenic |
| GGAACCTTCCGCCGAAGAGT+GGG | 0.589294 | 5.3:-12319936 | MS.gene68028:CDS |
| AGAAACCGTAAATTCACCTC+CGG | 0.589738 | 5.3:+12323106 | None:intergenic |
| TGTCCATATTCCTTGTGCAA+GGG | 0.590101 | 5.3:-12321483 | MS.gene68028:CDS |
| CAACGCTACCGACGCTGACG+TGG | 0.591602 | 5.3:-12323060 | MS.gene68028:CDS |
| AGTGTGACTACACAAGCAGA+TGG | 0.591958 | 5.3:-12320355 | MS.gene68028:CDS |
| CCGGTTTCTGAATCGGTGGG+TGG | 0.593008 | 5.3:+12323153 | None:intergenic |
| GATTCATCTGTACCATTAGG+GGG | 0.594328 | 5.3:+12320412 | None:intergenic |
| CCTTCTGATGAAGTGGTGGA+AGG | 0.595557 | 5.3:-12320196 | MS.gene68028:CDS |
| CATCATCTTAAAGTTGACAC+TGG | 0.595832 | 5.3:-12321063 | MS.gene68028:CDS |
| CTGATCGAGAACAGTGCCCA+AGG | 0.596069 | 5.3:-12321381 | MS.gene68028:CDS |
| CACGCCGGATGATACGCCTT+AGG | 0.596118 | 5.3:+12322776 | None:intergenic |
| CTCCAGATCTCAGAATATGG+AGG | 0.596407 | 5.3:-12320669 | MS.gene68028:CDS |
| CGGACCCTCAGAAGACCCAT+TGG | 0.597449 | 5.3:+12320129 | None:intergenic |
| CAATGATGGCACTGATGCAG+GGG | 0.597789 | 5.3:-12320854 | MS.gene68028:CDS |
| CTGTCCATATTCCTTGTGCA+AGG | 0.598848 | 5.3:-12321484 | MS.gene68028:CDS |
| TTACCGGTTTCTGAATCGGT+GGG | 0.600204 | 5.3:+12323150 | None:intergenic |
| ATTTGCTACAGTGGATTGAG+AGG | 0.601818 | 5.3:+12319799 | None:intergenic |
| TCTGCTTGTGTAGTCACACT+AGG | 0.601867 | 5.3:+12320358 | None:intergenic |
| GATGCAGGGGTTTCAAGACT+AGG | 0.604571 | 5.3:-12320841 | MS.gene68028:CDS |
| GTTGCTTCACTCTACAGGGA+TGG | 0.604743 | 5.3:-12320788 | MS.gene68028:CDS |
| TTTGCTACAGTGGATTGAGA+GGG | 0.605774 | 5.3:+12319800 | None:intergenic |
| GTAGCGTTGACTCCGATCAT+CGG | 0.605933 | 5.3:+12323074 | None:intergenic |
| TCCAGATCTCAGAATATGGA+GGG | 0.608096 | 5.3:-12320668 | MS.gene68028:CDS |
| CGCTACCGACGCTGACGTGG+CGG | 0.608936 | 5.3:-12323057 | MS.gene68028:CDS |
| CAGATGGGAATATCAGTGAT+GGG | 0.610058 | 5.3:-12320339 | MS.gene68028:CDS |
| GTTGCAAGGTTCAAACTCCC+CGG | 0.610227 | 5.3:-12321092 | MS.gene68028:CDS |
| ATCAATATCCCACTCTTCGG+CGG | 0.610806 | 5.3:+12319928 | None:intergenic |
| CTGAGGGTCCGAGTAATAGT+GGG | 0.616707 | 5.3:-12320117 | MS.gene68028:CDS |
| TTCCAGCAAATACCTGGGAA+AGG | 0.617718 | 5.3:+12319543 | None:intergenic |
| AAACGCGGTCGTCCGCCGAA+AGG | 0.620370 | 5.3:-12323026 | MS.gene68028:CDS |
| ATGAAGTGGTGGAAGGTCAT+GGG | 0.621645 | 5.3:-12320189 | MS.gene68028:CDS |
| GACTGTTGTTCACAGTTGAG+CGG | 0.623812 | 5.3:+12320571 | None:intergenic |
| GTGTGACTACACAAGCAGAT+GGG | 0.629009 | 5.3:-12320354 | MS.gene68028:CDS |
| TTGAAACTGAATCATCAACT+AGG | 0.629198 | 5.3:+12320002 | None:intergenic |
| TTCATCTGTACCATTAGGGG+GGG | 0.630127 | 5.3:+12320414 | None:intergenic |
| TTAAGATGATGACGCTTCCG+GGG | 0.630843 | 5.3:+12321075 | None:intergenic |
| CCTCCAATTCCGGTCACCGG+AGG | 0.631834 | 5.3:-12323122 | MS.gene68028:CDS |
| TTATCAGGATCCAACTGGGA+AGG | 0.637004 | 5.3:-12320749 | MS.gene68028:CDS |
| CAGAGCGAGGAAGAAAAGGT+GGG | 0.637763 | 5.3:-12320448 | MS.gene68028:CDS |
| GAATCTGTTAAGAGCAACGG+AGG | 0.639328 | 5.3:-12320394 | MS.gene68028:CDS |
| AATATCAGTGATGGGCAAAG+TGG | 0.641070 | 5.3:-12320331 | MS.gene68028:CDS |
| CCAGATTGTCAAGCAGAGCG+AGG | 0.642283 | 5.3:-12320461 | MS.gene68028:CDS |
| GTTAGTGTCAGAGCAAACAA+AGG | 0.643829 | 5.3:-12321435 | MS.gene68028:CDS |
| ACTCACCGCCACGTCAGCGT+CGG | 0.643993 | 5.3:+12323052 | None:intergenic |
| GACAGGTATAGCACATGTAG+TGG | 0.644673 | 5.3:+12321502 | None:intergenic |
| TTTGGTTCCAGCAAATACCT+GGG | 0.645945 | 5.3:+12319538 | None:intergenic |
| TGACAAACCTTCTGATGAAG+TGG | 0.646213 | 5.3:-12320203 | MS.gene68028:CDS |
| AGATTCATCTGTACCATTAG+GGG | 0.648209 | 5.3:+12320411 | None:intergenic |
| TCGTTGCTGTGCAAGTTGAA+AGG | 0.650161 | 5.3:-12320706 | MS.gene68028:CDS |
| ATTCATCTGTACCATTAGGG+GGG | 0.651828 | 5.3:+12320413 | None:intergenic |
| AGGCAGTTGAAGGTAGTGCA+AGG | 0.655786 | 5.3:+12320242 | None:intergenic |
| CAAACCTTCTGATGAAGTGG+TGG | 0.658297 | 5.3:-12320200 | MS.gene68028:CDS |
| AGAGCAAACAAAGGTTTGTG+CGG | 0.664820 | 5.3:-12321426 | MS.gene68028:CDS |
| TAATCAGCAAACTATATCTG+GGG | 0.665489 | 5.3:-12319747 | MS.gene68028:CDS |
| AGGTAGTGCAAGGTGTACGT+CGG | 0.666824 | 5.3:+12320252 | None:intergenic |
| TGTGTAGTCACACTAGGAGA+CGG | 0.667876 | 5.3:+12320364 | None:intergenic |
| GTTTGGGACAGTGTCTTGGA+CGG | 0.669837 | 5.3:-12320973 | MS.gene68028:CDS |
| TTAGCTGAGAAATGGAAATG+TGG | 0.673734 | 5.3:-12322725 | MS.gene68028:intron |
| TAGAGAAACAACTTACGAGG+TGG | 0.675171 | 5.3:+12319495 | None:intergenic |
| ATGGTCTTAGCAATGCAACA+AGG | 0.681952 | 5.3:-12320504 | MS.gene68028:CDS |
| TCATCTCGTTTAACACACGC+CGG | 0.683606 | 5.3:+12322761 | None:intergenic |
| GGAGGAGAAACACAGTGTCA+CGG | 0.684082 | 5.3:-12319957 | MS.gene68028:CDS |
| TGTGAAATTTCTTGTCATGG+TGG | 0.684535 | 5.3:-12320277 | MS.gene68028:CDS |
| CCGACATTGAAGAGAATCCG+GGG | 0.685264 | 5.3:-12320075 | MS.gene68028:CDS |
| TCCGGTTGTGAAGAAGCCGA+AGG | 0.686799 | 5.3:-12322985 | MS.gene68028:CDS |
| GGGTAAATGTAAATCACCTG+AGG | 0.697059 | 5.3:+12319820 | None:intergenic |
| AGGTAGAGAAACAACTTACG+AGG | 0.715989 | 5.3:+12319492 | None:intergenic |
| ACATGAACAGTACCTTTCGG+CGG | 0.743025 | 5.3:+12323014 | None:intergenic |
| AATCTGTTAAGAGCAACGGA+GGG | 0.752755 | 5.3:-12320393 | MS.gene68028:CDS |
| CAAACTCATCAATTTCCATG+GGG | 0.762481 | 5.3:-12319519 | MS.gene68028:CDS |
| GTGGCGGTGAGTAAGAAACG+CGG | 0.821614 | 5.3:-12323041 | MS.gene68028:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAATAAACGATTTTAT+CGG | + | chr5.3:12319821-12319840 | None:intergenic | 10.0% |
| !! | ATATAATTGTATGTAATCAA+TGG | - | chr5.3:12322967-12322986 | MS.gene68028:CDS | 15.0% |
| !! | TATAATTGTATGTAATCAAT+GGG | - | chr5.3:12322968-12322987 | MS.gene68028:CDS | 15.0% |
| !!! | AATGTTATTCTTTCTATTTT+AGG | - | chr5.3:12319844-12319863 | MS.gene68028:CDS | 15.0% |
| !!! | ATGTTATTCTTTCTATTTTA+GGG | - | chr5.3:12319845-12319864 | MS.gene68028:CDS | 15.0% |
| !! | AAAAACGTGAATGAAAAATT+AGG | - | chr5.3:12320722-12320741 | MS.gene68028:CDS | 20.0% |
| !! | AAAACGTGAATGAAAAATTA+GGG | - | chr5.3:12320723-12320742 | MS.gene68028:CDS | 20.0% |
| !! | AATTGAACTTAATTATGAGT+TGG | - | chr5.3:12320028-12320047 | MS.gene68028:CDS | 20.0% |
| !! | CTCTATATTTGAAAGTAAAA+TGG | - | chr5.3:12320341-12320360 | MS.gene68028:CDS | 20.0% |
| !! | TTTATACATGAAAAGCTTAA+TGG | - | chr5.3:12321354-12321373 | MS.gene68028:intron | 20.0% |
| !!! | ACTTATTTTAAATGACGTTT+CGG | + | chr5.3:12320132-12320151 | None:intergenic | 20.0% |
| !!! | AGTTTAAATTTAGATTTGCT+AGG | - | chr5.3:12323045-12323064 | MS.gene68028:CDS | 20.0% |
| !!! | ATGTGATTGTTTTTCTTTTA+TGG | - | chr5.3:12320253-12320272 | MS.gene68028:CDS | 20.0% |
| !!! | ATTAAGCTTTTCATGTATAA+AGG | + | chr5.3:12321355-12321374 | None:intergenic | 20.0% |
| !!! | ATTTTTATTTGAGTGTCTAA+TGG | - | chr5.3:12321049-12321068 | MS.gene68028:CDS | 20.0% |
| !!! | TGTGATTGTTTTTCTTTTAT+GGG | - | chr5.3:12320254-12320273 | MS.gene68028:CDS | 20.0% |
| !!! | TGTTATTCTTTCTATTTTAG+GGG | - | chr5.3:12319846-12319865 | MS.gene68028:CDS | 20.0% |
| !!! | TGTTATTTTTGTGTTTATTG+TGG | - | chr5.3:12319949-12319968 | MS.gene68028:CDS | 20.0% |
| !!! | TTAAGCTTTTCATGTATAAA+GGG | + | chr5.3:12321354-12321373 | None:intergenic | 20.0% |
| !!! | TTTATTTTCCAATGTAACAT+TGG | + | chr5.3:12322112-12322131 | None:intergenic | 20.0% |
| ! | AAAAACAGGAATGAAAATGT+AGG | - | chr5.3:12320676-12320695 | MS.gene68028:CDS | 25.0% |
| ! | AAAACAGGAATGAAAATGTA+GGG | - | chr5.3:12320677-12320696 | MS.gene68028:CDS | 25.0% |
| ! | AAATAGTCCTATAAACAAGA+AGG | - | chr5.3:12321642-12321661 | MS.gene68028:intron | 25.0% |
| ! | AAATGTGAAATTTCTTGTCA+TGG | - | chr5.3:12322369-12322388 | MS.gene68028:intron | 25.0% |
| ! | AATAAAGAAAATAGTCAGGA+TGG | - | chr5.3:12322126-12322145 | MS.gene68028:intron | 25.0% |
| ! | ACTATTTGAATCTACTATAC+AGG | + | chr5.3:12321629-12321648 | None:intergenic | 25.0% |
| ! | ATAAAACATGATCTATGCAA+GGG | + | chr5.3:12320828-12320847 | None:intergenic | 25.0% |
| ! | ATAATCAGCAAACTATATCT+GGG | - | chr5.3:12322901-12322920 | MS.gene68028:intron | 25.0% |
| ! | CGAAATGAATACTAATGAAT+CGG | - | chr5.3:12321768-12321787 | MS.gene68028:intron | 25.0% |
| ! | GATAAAAAATTGGAAGTGAA+TGG | - | chr5.3:12322486-12322505 | MS.gene68028:intron | 25.0% |
| ! | GGAAAATAAAGAAAATAGTC+AGG | - | chr5.3:12322122-12322141 | MS.gene68028:intron | 25.0% |
| ! | TACCAATATCATATAGATCA+AGG | + | chr5.3:12320594-12320613 | None:intergenic | 25.0% |
| ! | TATAAAACATGATCTATGCA+AGG | + | chr5.3:12320829-12320848 | None:intergenic | 25.0% |
| ! | TCATGGGAATGATAAAAAAT+TGG | - | chr5.3:12322476-12322495 | MS.gene68028:intron | 25.0% |
| ! | TCTACTGATGATTAGAATTT+GGG | - | chr5.3:12320101-12320120 | MS.gene68028:CDS | 25.0% |
| ! | TGACAAGAAATTTCACATTT+AGG | + | chr5.3:12322369-12322388 | None:intergenic | 25.0% |
| ! | TTCCTTGATCTATATGATAT+TGG | - | chr5.3:12320589-12320608 | MS.gene68028:CDS | 25.0% |
| ! | TTCTACTGATGATTAGAATT+TGG | - | chr5.3:12320100-12320119 | MS.gene68028:CDS | 25.0% |
| !! | GAATTTAGTGTCTTTGTTTA+TGG | - | chr5.3:12320496-12320515 | MS.gene68028:CDS | 25.0% |
| !! | TATATTTTACACAAGACCAA+CGG | + | chr5.3:12323013-12323032 | None:intergenic | 25.0% |
| !! | TGATTCAGTTTCAAATCTTT+TGG | - | chr5.3:12322656-12322675 | MS.gene68028:intron | 25.0% |
| !!! | AAGTTTTATTTTGTGCAAAG+TGG | - | chr5.3:12320148-12320167 | MS.gene68028:CDS | 25.0% |
| !!! | TTTTTTTTTTTGCATTGCCT+AGG | - | chr5.3:12321091-12321110 | MS.gene68028:CDS | 25.0% |
| AAACATGTGGATAAATGTCT+TGG | - | chr5.3:12320890-12320909 | MS.gene68028:CDS | 30.0% | |
| ACTAAATTCATGCCTAATGA+AGG | + | chr5.3:12320485-12320504 | None:intergenic | 30.0% | |
| ATAAATGTCTTGGATTATGC+AGG | - | chr5.3:12320900-12320919 | MS.gene68028:CDS | 30.0% | |
| ATCTACTATACAGGAATTCT+CGG | + | chr5.3:12321620-12321639 | None:intergenic | 30.0% | |
| ATGGAAATTGTTGAAGATCA+AGG | - | chr5.3:12320515-12320534 | MS.gene68028:CDS | 30.0% | |
| ATTGGAAGTGAATGGAAATT+TGG | - | chr5.3:12322494-12322513 | MS.gene68028:intron | 30.0% | |
| ATTTCCATTTCTCAGCTAAA+CGG | + | chr5.3:12319923-12319942 | None:intergenic | 30.0% | |
| CAAAGATGTACTAATTTGGA+AGG | - | chr5.3:12320772-12320791 | MS.gene68028:CDS | 30.0% | |
| CATAATCAGCAAACTATATC+TGG | - | chr5.3:12322900-12322919 | MS.gene68028:intron | 30.0% | |
| CTAAATTCATGCCTAATGAA+GGG | + | chr5.3:12320484-12320503 | None:intergenic | 30.0% | |
| CTAATCAATCAATTATGTGC+AGG | - | chr5.3:12323081-12323100 | MS.gene68028:CDS | 30.0% | |
| GCTATAACTGATTGTTTACA+AGG | - | chr5.3:12322759-12322778 | MS.gene68028:CDS | 30.0% | |
| GTCATTCAAATTCTCATCAA+AGG | + | chr5.3:12322430-12322449 | None:intergenic | 30.0% | |
| GTGTCAAAGATGTACTAATT+TGG | - | chr5.3:12320768-12320787 | MS.gene68028:CDS | 30.0% | |
| TAATCAGCAAACTATATCTG+GGG | - | chr5.3:12322902-12322921 | MS.gene68028:intron | 30.0% | |
| TACAATAGATTTCTCATGCA+TGG | - | chr5.3:12320847-12320866 | MS.gene68028:CDS | 30.0% | |
| TGATCAGCTTGTCAAAAATA+GGG | + | chr5.3:12321013-12321032 | None:intergenic | 30.0% | |
| TTGAAACTGAATCATCAACT+AGG | + | chr5.3:12322650-12322669 | None:intergenic | 30.0% | |
| TTGGAAGTGAATGGAAATTT+GGG | - | chr5.3:12322495-12322514 | MS.gene68028:intron | 30.0% | |
| ! | ATATTTTACACAAGACCAAC+GGG | + | chr5.3:12323012-12323031 | None:intergenic | 30.0% |
| ! | TTGGTATGTTACTTCATGTT+TGG | - | chr5.3:12320608-12320627 | MS.gene68028:CDS | 30.0% |
| !!! | AAAGTGGTTATTTTGAACGA+AGG | - | chr5.3:12322334-12322353 | MS.gene68028:intron | 30.0% |
| !!! | AAGTGGTTATTTTGAACGAA+GGG | - | chr5.3:12322335-12322354 | MS.gene68028:intron | 30.0% |
| AACTGTGAACAACAGTCTTT+GGG | - | chr5.3:12322084-12322103 | MS.gene68028:intron | 35.0% | |
| AATGAATCGGCAATCAATGA+TGG | - | chr5.3:12321781-12321800 | MS.gene68028:intron | 35.0% | |
| AATTGTTGAAGATCAAGGAG+TGG | - | chr5.3:12320520-12320539 | MS.gene68028:CDS | 35.0% | |
| ACAGATTCATCTGTACCATT+AGG | + | chr5.3:12322243-12322262 | None:intergenic | 35.0% | |
| ACCAAACTCATCAATTTCCA+TGG | - | chr5.3:12323128-12323147 | MS.gene68028:CDS | 35.0% | |
| AGACCATTACCTTAATTCCT+TGG | + | chr5.3:12321288-12321307 | None:intergenic | 35.0% | |
| AGATTCATCTGTACCATTAG+GGG | + | chr5.3:12322241-12322260 | None:intergenic | 35.0% | |
| CAAACTCATCAATTTCCATG+GGG | - | chr5.3:12323130-12323149 | MS.gene68028:CDS | 35.0% | |
| CAAGGAAAGAGAGAGAATTA+GGG | + | chr5.3:12320576-12320595 | None:intergenic | 35.0% | |
| CACTTGTTCTATGTGATCAT+CGG | - | chr5.3:12319726-12319745 | MS.gene68028:CDS | 35.0% | |
| CAGATTCATCTGTACCATTA+GGG | + | chr5.3:12322242-12322261 | None:intergenic | 35.0% | |
| CATACATCTTCTTCATCCTT+CGG | + | chr5.3:12319683-12319702 | None:intergenic | 35.0% | |
| CATCATCTTAAAGTTGACAC+TGG | - | chr5.3:12321586-12321605 | MS.gene68028:intron | 35.0% | |
| CCAAACTCATCAATTTCCAT+GGG | - | chr5.3:12323129-12323148 | MS.gene68028:CDS | 35.0% | |
| CCTATAAACAAGAAGGCTAA+GGG | - | chr5.3:12321649-12321668 | MS.gene68028:intron | 35.0% | |
| CGCACTAAAAAAATAGCACA+AGG | + | chr5.3:12321402-12321421 | None:intergenic | 35.0% | |
| GACCATTACCTTAATTCCTT+GGG | + | chr5.3:12321287-12321306 | None:intergenic | 35.0% | |
| GATATTGATGTGTTCACTGA+TGG | - | chr5.3:12322735-12322754 | MS.gene68028:CDS | 35.0% | |
| GATGAATCTGTTAAGAGCAA+CGG | - | chr5.3:12322252-12322271 | MS.gene68028:intron | 35.0% | |
| GTATGCTTCATTTGCTTTGA+TGG | - | chr5.3:12319698-12319717 | MS.gene68028:intron | 35.0% | |
| GTGATCAGCTTGTCAAAAAT+AGG | + | chr5.3:12321014-12321033 | None:intergenic | 35.0% | |
| TCAAGGAAAGAGAGAGAATT+AGG | + | chr5.3:12320577-12320596 | None:intergenic | 35.0% | |
| TCCTATAAACAAGAAGGCTA+AGG | - | chr5.3:12321648-12321667 | MS.gene68028:intron | 35.0% | |
| TGAACATGAACAGTACCTTT+CGG | + | chr5.3:12319641-12319660 | None:intergenic | 35.0% | |
| TGCTTGTGTATTTGATGTCT+GGG | - | chr5.3:12320447-12320466 | MS.gene68028:CDS | 35.0% | |
| TGTGAAATTTCTTGTCATGG+TGG | - | chr5.3:12322372-12322391 | MS.gene68028:intron | 35.0% | |
| TTAGCTGAGAAATGGAAATG+TGG | - | chr5.3:12319924-12319943 | MS.gene68028:CDS | 35.0% | |
| TTCAAAAACTCCTGAAGTTG+AGG | - | chr5.3:12322932-12322951 | MS.gene68028:CDS | 35.0% | |
| TTGCTTGTGTATTTGATGTC+TGG | - | chr5.3:12320446-12320465 | MS.gene68028:CDS | 35.0% | |
| ! | AAATCTTTTGGATGCAGTAG+CGG | - | chr5.3:12322668-12322687 | MS.gene68028:intron | 35.0% |
| ! | AATGGAAATTTGGGTTCCAA+TGG | - | chr5.3:12322504-12322523 | MS.gene68028:intron | 35.0% |
| ! | AGCTTTTCATGTATAAAGGG+AGG | + | chr5.3:12321351-12321370 | None:intergenic | 35.0% |
| ! | ATGGAAATTTGGGTTCCAAT+GGG | - | chr5.3:12322505-12322524 | MS.gene68028:intron | 35.0% |
| ! | ATGTTACTTCATGTTTGGTG+AGG | - | chr5.3:12320613-12320632 | MS.gene68028:CDS | 35.0% |
| ! | CATTCACGTTTTTGTGATTC+TGG | + | chr5.3:12320715-12320734 | None:intergenic | 35.0% |
| ! | GCTTTTCATGTATAAAGGGA+GGG | + | chr5.3:12321350-12321369 | None:intergenic | 35.0% |
| ! | TGTATTCACATTTAGCTCAC+AGG | + | chr5.3:12321734-12321753 | None:intergenic | 35.0% |
| ! | TGTTACTTCATGTTTGGTGA+GGG | - | chr5.3:12320614-12320633 | MS.gene68028:CDS | 35.0% |
| ! | TTTTCCGTTTAGCTGAGAAA+TGG | - | chr5.3:12319916-12319935 | MS.gene68028:CDS | 35.0% |
| !! | AGTATCTTTTCAAGGTGTAC+TGG | - | chr5.3:12321452-12321471 | MS.gene68028:CDS | 35.0% |
| !! | ATACTACCAGATTTTGATGC+AGG | - | chr5.3:12322786-12322805 | MS.gene68028:CDS | 35.0% |
| !! | ATTTTGATGATAGAAGCAGC+TGG | - | chr5.3:12321428-12321447 | MS.gene68028:CDS | 35.0% |
| !! | GTGTTTTTGCTTGAAACATG+TGG | - | chr5.3:12320877-12320896 | MS.gene68028:CDS | 35.0% |
| !! | TTTTGATGATAGAAGCAGCT+GGG | - | chr5.3:12321429-12321448 | MS.gene68028:CDS | 35.0% |
| !!! | GCTATTTTTTTAGTGCGAAG+TGG | - | chr5.3:12321405-12321424 | MS.gene68028:CDS | 35.0% |
| !!! | TTTTTTTGCATTGCCTAGGT+TGG | - | chr5.3:12321095-12321114 | MS.gene68028:CDS | 35.0% |
| AATCTGTTAAGAGCAACGGA+GGG | - | chr5.3:12322256-12322275 | MS.gene68028:intron | 40.0% | |
| AATGGTTCGTGTCTTTGTTC+TGG | - | chr5.3:12320359-12320378 | MS.gene68028:CDS | 40.0% | |
| AGAAACCGTAAATTCACCTC+CGG | + | chr5.3:12319546-12319565 | None:intergenic | 40.0% | |
| AGAAGGCTAAGGGAAATGTT+TGG | - | chr5.3:12321659-12321678 | MS.gene68028:intron | 40.0% | |
| AGAGCAAACAAAGGTTTGTG+CGG | - | chr5.3:12321223-12321242 | MS.gene68028:CDS | 40.0% | |
| AGGTAGAGAAACAACTTACG+AGG | + | chr5.3:12323160-12323179 | None:intergenic | 40.0% | |
| ATCCGACATTGAAGAGAATC+CGG | - | chr5.3:12322572-12322591 | MS.gene68028:intron | 40.0% | |
| ATGGTTCGTGTCTTTGTTCT+GGG | - | chr5.3:12320360-12320379 | MS.gene68028:CDS | 40.0% | |
| ATTCATCTGTACCATTAGGG+GGG | + | chr5.3:12322239-12322258 | None:intergenic | 40.0% | |
| CAACTGTGAACAACAGTCTT+TGG | - | chr5.3:12322083-12322102 | MS.gene68028:intron | 40.0% | |
| CACAGCAACGACATACTAAA+AGG | + | chr5.3:12321934-12321953 | None:intergenic | 40.0% | |
| CACATCAATATCCCACTCTT+CGG | + | chr5.3:12322727-12322746 | None:intergenic | 40.0% | |
| CAGATGGGAATATCAGTGAT+GGG | - | chr5.3:12322310-12322329 | MS.gene68028:intron | 40.0% | |
| CAGCTTGTCAAAAATAGGGA+AGG | + | chr5.3:12321009-12321028 | None:intergenic | 40.0% | |
| CCCATGGAAATTGATGAGTT+TGG | + | chr5.3:12323132-12323151 | None:intergenic | 40.0% | |
| CCTTTACCTGCATCAAAATC+TGG | + | chr5.3:12322795-12322814 | None:intergenic | 40.0% | |
| CGAGCTAAAAATCCTTGGAA+AGG | - | chr5.3:12321520-12321539 | MS.gene68028:CDS | 40.0% | |
| CTTGTGTATTTGATGTCTGG+GGG | - | chr5.3:12320449-12320468 | MS.gene68028:CDS | 40.0% | |
| GAAGGCTAAGGGAAATGTTT+GGG | - | chr5.3:12321660-12321679 | MS.gene68028:intron | 40.0% | |
| GATCCCAAATTCCCAATACT+TGG | + | chr5.3:12320645-12320664 | None:intergenic | 40.0% | |
| GATTCATCTGTACCATTAGG+GGG | + | chr5.3:12322240-12322259 | None:intergenic | 40.0% | |
| GCTTGTGTATTTGATGTCTG+GGG | - | chr5.3:12320448-12320467 | MS.gene68028:CDS | 40.0% | |
| GGGTAAATGTAAATCACCTG+AGG | + | chr5.3:12322832-12322851 | None:intergenic | 40.0% | |
| GTTAGTGTCAGAGCAAACAA+AGG | - | chr5.3:12321214-12321233 | MS.gene68028:CDS | 40.0% | |
| TACTGTTCATGTTCATGCTC+CGG | - | chr5.3:12319646-12319665 | MS.gene68028:intron | 40.0% | |
| TAGAGAAACAACTTACGAGG+TGG | + | chr5.3:12323157-12323176 | None:intergenic | 40.0% | |
| TCACTTTGCCCACTATTACT+CGG | + | chr5.3:12322543-12322562 | None:intergenic | 40.0% | |
| TCCAGATCTCAGAATATGGA+GGG | - | chr5.3:12321981-12322000 | MS.gene68028:intron | 40.0% | |
| TCCTTCGAGCTAAAAATCCT+TGG | - | chr5.3:12321515-12321534 | MS.gene68028:CDS | 40.0% | |
| TCTCTCCAGATCTCAGAATA+TGG | - | chr5.3:12321977-12321996 | MS.gene68028:intron | 40.0% | |
| TCTGAACATACTCCGATGAT+CGG | - | chr5.3:12319563-12319582 | MS.gene68028:intron | 40.0% | |
| TGACAAACCTTCTGATGAAG+TGG | - | chr5.3:12322446-12322465 | MS.gene68028:intron | 40.0% | |
| TGCCCAAGGAATTAAGGTAA+TGG | - | chr5.3:12321282-12321301 | MS.gene68028:intron | 40.0% | |
| TGCTTCATTTGCTTTGATGG+TGG | - | chr5.3:12319701-12319720 | MS.gene68028:intron | 40.0% | |
| TGTCCATATTCCTTGTGCAA+GGG | - | chr5.3:12321166-12321185 | MS.gene68028:CDS | 40.0% | |
| TTCATGTATAAAGGGAGGGA+GGG | + | chr5.3:12321346-12321365 | None:intergenic | 40.0% | |
| TTCTCATCAAAGGCAGTTGA+AGG | + | chr5.3:12322420-12322439 | None:intergenic | 40.0% | |
| TTGTGTATTTGATGTCTGGG+GGG | - | chr5.3:12320450-12320469 | MS.gene68028:CDS | 40.0% | |
| TTTCATGTATAAAGGGAGGG+AGG | + | chr5.3:12321347-12321366 | None:intergenic | 40.0% | |
| TTTGGGAGCCAATGTTACAT+TGG | - | chr5.3:12322101-12322120 | MS.gene68028:intron | 40.0% | |
| ! | AAATGTTTGGGACAGTGTCT+TGG | - | chr5.3:12321672-12321691 | MS.gene68028:intron | 40.0% |
| ! | ATGGTCTTAGCAATGCAACA+AGG | - | chr5.3:12322145-12322164 | MS.gene68028:intron | 40.0% |
| ! | ATTGGGAATTTGGGATCCTT+GGG | - | chr5.3:12320648-12320667 | MS.gene68028:CDS | 40.0% |
| ! | ATTGTTGCTGGTTGAGAAGA+TGG | - | chr5.3:12320403-12320422 | MS.gene68028:CDS | 40.0% |
| ! | ATTTTACGCACCTCAACTTC+AGG | + | chr5.3:12322945-12322964 | None:intergenic | 40.0% |
| ! | CCCTTAGCCTTCTTGTTTAT+AGG | + | chr5.3:12321652-12321671 | None:intergenic | 40.0% |
| ! | CTTAAAGTTGACACTGGTTG+TGG | - | chr5.3:12321592-12321611 | MS.gene68028:intron | 40.0% |
| ! | GAGCGGCAATGATACATTTT+GGG | + | chr5.3:12322064-12322083 | None:intergenic | 40.0% |
| ! | TATTGGGAATTTGGGATCCT+TGG | - | chr5.3:12320647-12320666 | MS.gene68028:CDS | 40.0% |
| ! | TGAGCGGCAATGATACATTT+TGG | + | chr5.3:12322065-12322084 | None:intergenic | 40.0% |
| ! | TTTAAGATGATGACGCTTCC+GGG | + | chr5.3:12321578-12321597 | None:intergenic | 40.0% |
| ! | TTTGGTTCCAGCAAATACCT+GGG | + | chr5.3:12323114-12323133 | None:intergenic | 40.0% |
| ! | TTTTGTACATCCCTTGCACA+AGG | + | chr5.3:12321179-12321198 | None:intergenic | 40.0% |
| !! | AATATCAGTGATGGGCAAAG+TGG | - | chr5.3:12322318-12322337 | MS.gene68028:intron | 40.0% |
| !! | ATTTGCTACAGTGGATTGAG+AGG | + | chr5.3:12322853-12322872 | None:intergenic | 40.0% |
| !! | CCAGATTTTGATGCAGGTAA+AGG | - | chr5.3:12322792-12322811 | MS.gene68028:intron | 40.0% |
| !! | CTATTTTAGGGGTTGTCCTA+AGG | - | chr5.3:12319857-12319876 | MS.gene68028:CDS | 40.0% |
| !! | CTTTAAGATGATGACGCTTC+CGG | + | chr5.3:12321579-12321598 | None:intergenic | 40.0% |
| !! | GGAATTACCGGTTTCTGAAT+CGG | + | chr5.3:12319506-12319525 | None:intergenic | 40.0% |
| !! | GTGTACTGGTTGTACTTGAA+AGG | - | chr5.3:12321466-12321485 | MS.gene68028:CDS | 40.0% |
| !! | TTTGCTACAGTGGATTGAGA+GGG | + | chr5.3:12322852-12322871 | None:intergenic | 40.0% |
| !!! | TCCAAGGATTTTTAGCTCGA+AGG | + | chr5.3:12321519-12321538 | None:intergenic | 40.0% |
| ACAGCCAGTTTGGCATTATC+AGG | - | chr5.3:12321885-12321904 | MS.gene68028:intron | 45.0% | |
| ACATGAACAGTACCTTTCGG+CGG | + | chr5.3:12319638-12319657 | None:intergenic | 45.0% | |
| AGTGTGACTACACAAGCAGA+TGG | - | chr5.3:12322294-12322313 | MS.gene68028:intron | 45.0% | |
| ATCAATATCCCACTCTTCGG+CGG | + | chr5.3:12322724-12322743 | None:intergenic | 45.0% | |
| CAAACCTTCTGATGAAGTGG+TGG | - | chr5.3:12322449-12322468 | MS.gene68028:intron | 45.0% | |
| CATCCCTTGCACAAGGAATA+TGG | + | chr5.3:12321172-12321191 | None:intergenic | 45.0% | |
| CATCGTTGCTTCACTCTACA+GGG | - | chr5.3:12321857-12321876 | MS.gene68028:intron | 45.0% | |
| CCAAATTCCCAATACTTGGC+CGG | + | chr5.3:12320641-12320660 | None:intergenic | 45.0% | |
| CTCCAGATCTCAGAATATGG+AGG | - | chr5.3:12321980-12321999 | MS.gene68028:intron | 45.0% | |
| CTGTCCATATTCCTTGTGCA+AGG | - | chr5.3:12321165-12321184 | MS.gene68028:CDS | 45.0% | |
| CTTGCACAAGGAATATGGAC+AGG | + | chr5.3:12321167-12321186 | None:intergenic | 45.0% | |
| GAACAGTGCCCAAGGAATTA+AGG | - | chr5.3:12321276-12321295 | MS.gene68028:intron | 45.0% | |
| GAATCTGTTAAGAGCAACGG+AGG | - | chr5.3:12322255-12322274 | MS.gene68028:intron | 45.0% | |
| GACAGGTATAGCACATGTAG+TGG | + | chr5.3:12321150-12321169 | None:intergenic | 45.0% | |
| GACTGTTGTTCACAGTTGAG+CGG | + | chr5.3:12322081-12322100 | None:intergenic | 45.0% | |
| GCAGATGGGAATATCAGTGA+TGG | - | chr5.3:12322309-12322328 | MS.gene68028:intron | 45.0% | |
| GGAATTGGAGGTGGAATTAC+CGG | + | chr5.3:12319518-12319537 | None:intergenic | 45.0% | |
| GGCATTATCAGGATCCAACT+GGG | - | chr5.3:12321896-12321915 | MS.gene68028:intron | 45.0% | |
| GGTAATTCCACCTCCAATTC+CGG | - | chr5.3:12319517-12319536 | MS.gene68028:CDS | 45.0% | |
| GTGTGACTACACAAGCAGAT+GGG | - | chr5.3:12322295-12322314 | MS.gene68028:intron | 45.0% | |
| GTTTCAAGACTAGGAGAGTC+TGG | - | chr5.3:12321817-12321836 | MS.gene68028:intron | 45.0% | |
| TCAACCAGCAACAATTTCGC+CGG | + | chr5.3:12320398-12320417 | None:intergenic | 45.0% | |
| TCATCGTTGCTTCACTCTAC+AGG | - | chr5.3:12321856-12321875 | MS.gene68028:intron | 45.0% | |
| TCATCTCGTTTAACACACGC+CGG | + | chr5.3:12319891-12319910 | None:intergenic | 45.0% | |
| TCATGTATAAAGGGAGGGAG+GGG | + | chr5.3:12321345-12321364 | None:intergenic | 45.0% | |
| TCCGACATTGAAGAGAATCC+GGG | - | chr5.3:12322573-12322592 | MS.gene68028:intron | 45.0% | |
| TCTGCTTGTGTAGTCACACT+AGG | + | chr5.3:12322294-12322313 | None:intergenic | 45.0% | |
| TGGCATCTATGTAGCGATTG+TGG | - | chr5.3:12321115-12321134 | MS.gene68028:CDS | 45.0% | |
| TGGCATTATCAGGATCCAAC+TGG | - | chr5.3:12321895-12321914 | MS.gene68028:intron | 45.0% | |
| TGGTTCGTGTCTTTGTTCTG+GGG | - | chr5.3:12320361-12320380 | MS.gene68028:CDS | 45.0% | |
| TGTGTAGTCACACTAGGAGA+CGG | + | chr5.3:12322288-12322307 | None:intergenic | 45.0% | |
| TTATCAGGATCCAACTGGGA+AGG | - | chr5.3:12321900-12321919 | MS.gene68028:intron | 45.0% | |
| TTCATCTGTACCATTAGGGG+GGG | + | chr5.3:12322238-12322257 | None:intergenic | 45.0% | |
| TTCCAGCAAATACCTGGGAA+AGG | + | chr5.3:12323109-12323128 | None:intergenic | 45.0% | |
| TTCTGGTCAGAACTGGATGA+TGG | - | chr5.3:12322602-12322621 | MS.gene68028:intron | 45.0% | |
| TTGTCCTAAGGCGTATCATC+CGG | - | chr5.3:12319869-12319888 | MS.gene68028:CDS | 45.0% | |
| TTTACACAAGACCAACGGGT+GGG | + | chr5.3:12323008-12323027 | None:intergenic | 45.0% | |
| ! | ATCCTTGGGGGTACAAAAAC+AGG | - | chr5.3:12320662-12320681 | MS.gene68028:CDS | 45.0% |
| ! | ATGAAGTGGTGGAAGGTCAT+GGG | - | chr5.3:12322460-12322479 | MS.gene68028:intron | 45.0% |
| ! | CACATTTAGCTCACAGGTAG+TGG | + | chr5.3:12321728-12321747 | None:intergenic | 45.0% |
| ! | GGATCCTGATAATGCCAAAC+TGG | + | chr5.3:12321892-12321911 | None:intergenic | 45.0% |
| ! | GTTTGGTTCCAGCAAATACC+TGG | + | chr5.3:12323115-12323134 | None:intergenic | 45.0% |
| ! | TCGTTGCTGTGCAAGTTGAA+AGG | - | chr5.3:12321943-12321962 | MS.gene68028:intron | 45.0% |
| ! | TGCACATCTGCTTGCTGAAA+CGG | + | chr5.3:12322882-12322901 | None:intergenic | 45.0% |
| ! | TTAAGATGATGACGCTTCCG+GGG | + | chr5.3:12321577-12321596 | None:intergenic | 45.0% |
| ! | TTGGGAATTTGGGATCCTTG+GGG | - | chr5.3:12320649-12320668 | MS.gene68028:CDS | 45.0% |
| ! | TTTTACACAAGACCAACGGG+TGG | + | chr5.3:12323009-12323028 | None:intergenic | 45.0% |
| !! | ACCCTCCATATTCTGAGATC+TGG | + | chr5.3:12321985-12322004 | None:intergenic | 45.0% |
| !! | ATCAATGATGGCACTGATGC+AGG | - | chr5.3:12321793-12321812 | MS.gene68028:intron | 45.0% |
| !! | ATTACCGGTTTCTGAATCGG+TGG | + | chr5.3:12319503-12319522 | None:intergenic | 45.0% |
| !! | CGGCCAAGTATTGGGAATTT+GGG | - | chr5.3:12320639-12320658 | MS.gene68028:CDS | 45.0% |
| !! | TCAATGATGGCACTGATGCA+GGG | - | chr5.3:12321794-12321813 | MS.gene68028:intron | 45.0% |
| !! | TTACCGGTTTCTGAATCGGT+GGG | + | chr5.3:12319502-12319521 | None:intergenic | 45.0% |
| !!! | CAGCTGGGAGTATCTTTTCA+AGG | - | chr5.3:12321444-12321463 | MS.gene68028:CDS | 45.0% |
| !!! | TTCCTGTTTTTGTACCCCCA+AGG | + | chr5.3:12320667-12320686 | None:intergenic | 45.0% |
| AAGGAGTGGCGCTTGTAACT+GGG | - | chr5.3:12320534-12320553 | MS.gene68028:CDS | 50.0% | |
| AGGCAGTTGAAGGTAGTGCA+AGG | + | chr5.3:12322410-12322429 | None:intergenic | 50.0% | |
| AGGTAGTGCAAGGTGTACGT+CGG | + | chr5.3:12322400-12322419 | None:intergenic | 50.0% | |
| CAAGCAGAGCGAGGAAGAAA+AGG | - | chr5.3:12322197-12322216 | MS.gene68028:intron | 50.0% | |
| CAGAGCGAGGAAGAAAAGGT+GGG | - | chr5.3:12322201-12322220 | MS.gene68028:intron | 50.0% | |
| CCCCGGATTCTCTTCAATGT+CGG | + | chr5.3:12322577-12322596 | None:intergenic | 50.0% | |
| CCGACATTGAAGAGAATCCG+GGG | - | chr5.3:12322574-12322593 | MS.gene68028:intron | 50.0% | |
| CCTTCCACCACTTCATCAGA+AGG | + | chr5.3:12322456-12322475 | None:intergenic | 50.0% | |
| CGCTACATAGATGCCAACCT+AGG | + | chr5.3:12321111-12321130 | None:intergenic | 50.0% | |
| CTCCTTTCCCAGGTATTTGC+TGG | - | chr5.3:12323104-12323123 | MS.gene68028:CDS | 50.0% | |
| CTGAGGGTCCGAGTAATAGT+GGG | - | chr5.3:12322532-12322551 | MS.gene68028:intron | 50.0% | |
| GATACTTGTACCCCCCCTAA+TGG | - | chr5.3:12322225-12322244 | MS.gene68028:intron | 50.0% | |
| GATCCAACTGGGAAGGTTCA+TGG | - | chr5.3:12321907-12321926 | MS.gene68028:intron | 50.0% | |
| GATGCAGGGGTTTCAAGACT+AGG | - | chr5.3:12321808-12321827 | MS.gene68028:intron | 50.0% | |
| GGAGGAGAAACACAGTGTCA+CGG | - | chr5.3:12322692-12322711 | MS.gene68028:intron | 50.0% | |
| GGCAATCTTCTGGTCAGAAC+TGG | - | chr5.3:12322595-12322614 | MS.gene68028:intron | 50.0% | |
| GGTCACCGGAGGTGAATTTA+CGG | - | chr5.3:12319538-12319557 | MS.gene68028:CDS | 50.0% | |
| GGTTCCAATGGGTCTTCTGA+GGG | - | chr5.3:12322516-12322535 | MS.gene68028:intron | 50.0% | |
| GGTTCGTGTCTTTGTTCTGG+GGG | - | chr5.3:12320362-12320381 | MS.gene68028:CDS | 50.0% | |
| GTAAATTCACCTCCGGTGAC+CGG | + | chr5.3:12319539-12319558 | None:intergenic | 50.0% | |
| GTTGCAAGGTTCAAACTCCC+CGG | - | chr5.3:12321557-12321576 | MS.gene68028:intron | 50.0% | |
| GTTGCTTCACTCTACAGGGA+TGG | - | chr5.3:12321861-12321880 | MS.gene68028:intron | 50.0% | |
| TATTTGATGTCTGGGGGGCT+TGG | - | chr5.3:12320455-12320474 | MS.gene68028:CDS | 50.0% | |
| TCCTTCGGCTTCTTCACAAC+CGG | + | chr5.3:12319668-12319687 | None:intergenic | 50.0% | |
| TCTGAGGGTCCGAGTAATAG+TGG | - | chr5.3:12322531-12322550 | MS.gene68028:intron | 50.0% | |
| TGAACCGGCGAAATTGTTGC+TGG | - | chr5.3:12320391-12320410 | MS.gene68028:CDS | 50.0% | |
| TTCTGACCAGAAGATTGCCC+CGG | + | chr5.3:12322594-12322613 | None:intergenic | 50.0% | |
| ! | CCTTCTGATGAAGTGGTGGA+AGG | - | chr5.3:12322453-12322472 | MS.gene68028:intron | 50.0% |
| ! | CGGTTGCTCATTTGCTACAG+TGG | + | chr5.3:12322862-12322881 | None:intergenic | 50.0% |
| ! | CTTCATGTTTGGTGAGGGTC+CGG | - | chr5.3:12320619-12320638 | MS.gene68028:CDS | 50.0% |
| ! | GATGAAGTGGTGGAAGGTCA+TGG | - | chr5.3:12322459-12322478 | MS.gene68028:intron | 50.0% |
| ! | GGGCTTGGTTTCCCTTCATT+AGG | - | chr5.3:12320470-12320489 | MS.gene68028:CDS | 50.0% |
| ! | GTTTGGGACAGTGTCTTGGA+CGG | - | chr5.3:12321676-12321695 | MS.gene68028:intron | 50.0% |
| ! | TCTTTTGGATGCAGTAGCGG+CGG | - | chr5.3:12322671-12322690 | MS.gene68028:intron | 50.0% |
| ! | TGGATGATGGCAGCACTCTT+TGG | - | chr5.3:12322615-12322634 | MS.gene68028:intron | 50.0% |
| ! | TGGGAATTTGGGATCCTTGG+GGG | - | chr5.3:12320650-12320669 | MS.gene68028:CDS | 50.0% |
| !! | CAATGATGGCACTGATGCAG+GGG | - | chr5.3:12321795-12321814 | MS.gene68028:intron | 50.0% |
| !! | CCGGCCAAGTATTGGGAATT+TGG | - | chr5.3:12320638-12320657 | MS.gene68028:CDS | 50.0% |
| !! | GTAGCGTTGACTCCGATCAT+CGG | + | chr5.3:12319578-12319597 | None:intergenic | 50.0% |
| AACTTACGAGGTGGACCCCA+TGG | + | chr5.3:12323148-12323167 | None:intergenic | 55.0% | |
| AGGAGTGGCGCTTGTAACTG+GGG | - | chr5.3:12320535-12320554 | MS.gene68028:CDS | 55.0% | |
| ATATCCCACTCTTCGGCGGA+AGG | + | chr5.3:12322720-12322739 | None:intergenic | 55.0% | |
| CAAGGAGTGGCGCTTGTAAC+TGG | - | chr5.3:12320533-12320552 | MS.gene68028:CDS | 55.0% | |
| CAGGGATGGAACAGCCAGTT+TGG | - | chr5.3:12321875-12321894 | MS.gene68028:intron | 55.0% | |
| CCAGATTGTCAAGCAGAGCG+AGG | - | chr5.3:12322188-12322207 | MS.gene68028:intron | 55.0% | |
| CCTCGCTCTGCTTGACAATC+TGG | + | chr5.3:12322191-12322210 | None:intergenic | 55.0% | |
| CTGAAAACCATCCCACCCGT+TGG | - | chr5.3:12322994-12323013 | MS.gene68028:CDS | 55.0% | |
| CTGATCGAGAACAGTGCCCA+AGG | - | chr5.3:12321268-12321287 | MS.gene68028:intron | 55.0% | |
| GACAGTGTCTTGGACGGTGT+TGG | - | chr5.3:12321682-12321701 | MS.gene68028:intron | 55.0% | |
| GAGAATCCGGGGCAATCTTC+TGG | - | chr5.3:12322585-12322604 | MS.gene68028:intron | 55.0% | |
| GCACGAACAGCACCTTTCCA+AGG | + | chr5.3:12321535-12321554 | None:intergenic | 55.0% | |
| GCAGAGCGAGGAAGAAAAGG+TGG | - | chr5.3:12322200-12322219 | MS.gene68028:intron | 55.0% | |
| GGACCATGAACCTTCCCAGT+TGG | + | chr5.3:12321913-12321932 | None:intergenic | 55.0% | |
| GGGTTCCAATGGGTCTTCTG+AGG | - | chr5.3:12322515-12322534 | MS.gene68028:intron | 55.0% | |
| GGTAGTGCAAGGTGTACGTC+GGG | + | chr5.3:12322399-12322418 | None:intergenic | 55.0% | |
| GTGGCGGTGAGTAAGAAACG+CGG | - | chr5.3:12319608-12319627 | MS.gene68028:intron | 55.0% | |
| GTTTGTGCGGAGCATGCTTG+AGG | - | chr5.3:12321236-12321255 | MS.gene68028:intron | 55.0% | |
| TATGTGCAGGCTCCTTTCCC+AGG | - | chr5.3:12323094-12323113 | MS.gene68028:CDS | 55.0% | |
| TCCGGTTGTGAAGAAGCCGA+AGG | - | chr5.3:12319664-12319683 | MS.gene68028:intron | 55.0% | |
| TGAGGGTCCGGCCAAGTATT+GGG | - | chr5.3:12320631-12320650 | MS.gene68028:CDS | 55.0% | |
| TGCTGTTCGTGCGAGTTGCA+AGG | - | chr5.3:12321543-12321562 | MS.gene68028:intron | 55.0% | |
| ! | AGTGTCTTGGACGGTGTTGG+AGG | - | chr5.3:12321685-12321704 | MS.gene68028:intron | 55.0% |
| ! | TTCTGGGGGCTGAACTGAAC+CGG | - | chr5.3:12320376-12320395 | MS.gene68028:CDS | 55.0% |
| !! | CCACCCACCGATTCAGAAAC+CGG | - | chr5.3:12319496-12319515 | MS.gene68028:CDS | 55.0% |
| CACAAGACCAACGGGTGGGA+TGG | + | chr5.3:12323004-12323023 | None:intergenic | 60.0% | |
| CACGCCGGATGATACGCCTT+AGG | + | chr5.3:12319876-12319895 | None:intergenic | 60.0% | |
| CCACCTCCAATTCCGGTCAC+CGG | - | chr5.3:12319524-12319543 | MS.gene68028:CDS | 60.0% | |
| CCGGTTTCTGAATCGGTGGG+TGG | + | chr5.3:12319499-12319518 | None:intergenic | 60.0% | |
| CGCTTGTAACTGGGGGAGTG+GGG | - | chr5.3:12320543-12320562 | MS.gene68028:CDS | 60.0% | |
| CGGACCCTCAGAAGACCCAT+TGG | + | chr5.3:12322523-12322542 | None:intergenic | 60.0% | |
| GCGCTTGTAACTGGGGGAGT+GGG | - | chr5.3:12320542-12320561 | MS.gene68028:CDS | 60.0% | |
| GCTTGTAACTGGGGGAGTGG+GGG | - | chr5.3:12320544-12320563 | MS.gene68028:CDS | 60.0% | |
| GGAACCTTCCGCCGAAGAGT+GGG | - | chr5.3:12322713-12322732 | MS.gene68028:intron | 60.0% | |
| GGAGTGGCGCTTGTAACTGG+GGG | - | chr5.3:12320536-12320555 | MS.gene68028:CDS | 60.0% | |
| GTGAGGGTCCGGCCAAGTAT+TGG | - | chr5.3:12320630-12320649 | MS.gene68028:CDS | 60.0% | |
| TCACCTCCGGTGACCGGAAT+TGG | + | chr5.3:12319533-12319552 | None:intergenic | 60.0% | |
| TTTGGATGCAGTAGCGGCGG+AGG | - | chr5.3:12322674-12322693 | MS.gene68028:intron | 60.0% | |
| ! | GGTGATGCTCTGAGCTCCTC+AGG | - | chr5.3:12322813-12322832 | MS.gene68028:intron | 60.0% |
| AAACGCGGTCGTCCGCCGAA+AGG | - | chr5.3:12319623-12319642 | MS.gene68028:intron | 65.0% | |
| ACTCACCGCCACGTCAGCGT+CGG | + | chr5.3:12319600-12319619 | None:intergenic | 65.0% | |
| CAACGCTACCGACGCTGACG+TGG | - | chr5.3:12319589-12319608 | MS.gene68028:intron | 65.0% | |
| CCGGTGACCGGAATTGGAGG+TGG | + | chr5.3:12319527-12319546 | None:intergenic | 65.0% | |
| CCTCCAATTCCGGTCACCGG+AGG | - | chr5.3:12319527-12319546 | MS.gene68028:CDS | 65.0% | |
| CCTCCGGTGACCGGAATTGG+AGG | + | chr5.3:12319530-12319549 | None:intergenic | 65.0% | |
| CGGAACCTTCCGCCGAAGAG+TGG | - | chr5.3:12322712-12322731 | MS.gene68028:intron | 65.0% | |
| GGCGCTTGTAACTGGGGGAG+TGG | - | chr5.3:12320541-12320560 | MS.gene68028:CDS | 65.0% | |
| CGCTACCGACGCTGACGTGG+CGG | - | chr5.3:12319592-12319611 | MS.gene68028:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 12319482 | 12323189 | 12319482 | ID=MS.gene68028 |
| chr5.3 | mRNA | 12319482 | 12323189 | 12319482 | ID=MS.gene68028.t1;Parent=MS.gene68028 |
| chr5.3 | exon | 12322924 | 12323189 | 12322924 | ID=MS.gene68028.t1.exon1;Parent=MS.gene68028.t1 |
| chr5.3 | CDS | 12322924 | 12323189 | 12322924 | ID=cds.MS.gene68028.t1;Parent=MS.gene68028.t1 |
| chr5.3 | exon | 12322726 | 12322805 | 12322726 | ID=MS.gene68028.t1.exon2;Parent=MS.gene68028.t1 |
| chr5.3 | CDS | 12322726 | 12322805 | 12322726 | ID=cds.MS.gene68028.t1;Parent=MS.gene68028.t1 |
| chr5.3 | exon | 12321374 | 12321558 | 12321374 | ID=MS.gene68028.t1.exon3;Parent=MS.gene68028.t1 |
| chr5.3 | CDS | 12321374 | 12321558 | 12321374 | ID=cds.MS.gene68028.t1;Parent=MS.gene68028.t1 |
| chr5.3 | exon | 12319718 | 12321253 | 12319718 | ID=MS.gene68028.t1.exon4;Parent=MS.gene68028.t1 |
| chr5.3 | CDS | 12319718 | 12321253 | 12319718 | ID=cds.MS.gene68028.t1;Parent=MS.gene68028.t1 |
| chr5.3 | exon | 12319482 | 12319568 | 12319482 | ID=MS.gene68028.t1.exon5;Parent=MS.gene68028.t1 |
| chr5.3 | CDS | 12319482 | 12319568 | 12319482 | ID=cds.MS.gene68028.t1;Parent=MS.gene68028.t1 |
| Gene Sequence |
| Protein sequence |
