Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68740.t1 | XP_003604056.2 | 98.5 | 265 | 4 | 0 | 1 | 265 | 1 | 265 | 1.50E-143 | 520 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68740.t1 | P49227 | 81.9 | 265 | 48 | 0 | 1 | 265 | 1 | 265 | 3.2e-123 | 443.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68740.t1 | G7J8J8 | 98.5 | 265 | 4 | 0 | 1 | 265 | 1 | 265 | 1.1e-143 | 520.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049361 | MS.gene68740 | 0.800426 | 1.45E-48 | -1.69E-46 |
MS.gene050134 | MS.gene68740 | 0.834596 | 2.74E-56 | -1.69E-46 |
MS.gene050791 | MS.gene68740 | 0.847404 | 1.18E-59 | -1.69E-46 |
MS.gene050912 | MS.gene68740 | 0.802955 | 4.39E-49 | -1.69E-46 |
MS.gene051984 | MS.gene68740 | 0.813715 | 2.22E-51 | -1.69E-46 |
MS.gene053224 | MS.gene68740 | 0.816318 | 5.88E-52 | -1.69E-46 |
MS.gene057272 | MS.gene68740 | 0.832084 | 1.16E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene065021 | MS.gene68740 | PPI |
MS.gene74935 | MS.gene68740 | PPI |
MS.gene063094 | MS.gene68740 | PPI |
MS.gene68141 | MS.gene68740 | PPI |
MS.gene029288 | MS.gene68740 | PPI |
MS.gene014205 | MS.gene68740 | PPI |
MS.gene037275 | MS.gene68740 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68740.t1 | MTR_3g118020 | 92.089 | 316 | 12 | 2 | 292 | 607 | 83 | 385 | 0.0 | 579 |
MS.gene68740.t1 | MTR_3g118020 | 92.089 | 316 | 12 | 2 | 292 | 607 | 6 | 308 | 0.0 | 577 |
MS.gene68740.t1 | MTR_3g118030 | 97.048 | 271 | 8 | 0 | 1 | 271 | 1 | 271 | 0.0 | 546 |
MS.gene68740.t1 | MTR_8g028125 | 85.467 | 289 | 38 | 1 | 1 | 285 | 1 | 289 | 0.0 | 516 |
MS.gene68740.t1 | MTR_1g112660 | 48.189 | 359 | 137 | 13 | 276 | 606 | 25 | 362 | 3.64e-84 | 268 |
MS.gene68740.t1 | MTR_1g112660 | 48.189 | 359 | 137 | 13 | 276 | 606 | 83 | 420 | 2.13e-83 | 268 |
MS.gene68740.t1 | MTR_1g112660 | 49.138 | 348 | 134 | 12 | 287 | 606 | 112 | 444 | 4.98e-83 | 268 |
MS.gene68740.t1 | MTR_4g016680 | 47.101 | 138 | 34 | 2 | 127 | 264 | 8 | 106 | 2.08e-29 | 114 |
MS.gene68740.t1 | MTR_2g435940 | 73.611 | 72 | 14 | 1 | 178 | 244 | 24 | 95 | 2.25e-26 | 103 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68740.t1 | AT5G39740 | 80.812 | 271 | 52 | 0 | 1 | 271 | 1 | 271 | 1.52e-162 | 466 |
MS.gene68740.t1 | AT5G39740 | 80.812 | 271 | 52 | 0 | 1 | 271 | 1 | 271 | 1.52e-162 | 466 |
MS.gene68740.t1 | AT3G25520 | 80.812 | 271 | 52 | 0 | 1 | 271 | 1 | 271 | 3.95e-161 | 463 |
MS.gene68740.t1 | AT3G25520 | 80.812 | 271 | 52 | 0 | 1 | 271 | 1 | 271 | 3.95e-161 | 463 |
MS.gene68740.t1 | AT3G25520 | 79.874 | 159 | 32 | 0 | 113 | 271 | 2 | 160 | 4.47e-86 | 266 |
MS.gene68740.t1 | AT4G35110 | 38.860 | 193 | 109 | 3 | 418 | 607 | 200 | 386 | 5.92e-33 | 130 |
MS.gene68740.t1 | AT4G35110 | 38.860 | 193 | 109 | 3 | 418 | 607 | 200 | 386 | 5.92e-33 | 130 |
MS.gene68740.t1 | AT4G35110 | 38.860 | 193 | 109 | 3 | 418 | 607 | 200 | 386 | 5.92e-33 | 130 |
MS.gene68740.t1 | AT4G35110 | 38.860 | 193 | 109 | 3 | 418 | 607 | 200 | 386 | 5.92e-33 | 130 |
MS.gene68740.t1 | AT4G35110 | 38.860 | 193 | 109 | 3 | 418 | 607 | 215 | 401 | 8.12e-33 | 130 |
MS.gene68740.t1 | AT4G35110 | 38.860 | 193 | 109 | 3 | 418 | 607 | 212 | 398 | 9.64e-33 | 130 |
MS.gene68740.t1 | AT2G16900 | 39.521 | 167 | 94 | 2 | 418 | 583 | 107 | 267 | 1.64e-32 | 127 |
MS.gene68740.t1 | AT2G16900 | 39.521 | 167 | 94 | 2 | 418 | 583 | 107 | 267 | 1.64e-32 | 127 |
MS.gene68740.t1 | AT2G16900 | 39.521 | 167 | 94 | 2 | 418 | 583 | 107 | 267 | 1.64e-32 | 127 |
MS.gene68740.t1 | AT2G16900 | 39.521 | 167 | 94 | 2 | 418 | 583 | 107 | 267 | 1.64e-32 | 127 |
MS.gene68740.t1 | AT2G16900 | 39.521 | 167 | 94 | 2 | 418 | 583 | 196 | 356 | 2.59e-32 | 129 |
MS.gene68740.t1 | AT2G16900 | 39.521 | 167 | 94 | 2 | 418 | 583 | 196 | 356 | 2.59e-32 | 129 |
MS.gene68740.t1 | AT2G16900 | 39.521 | 167 | 94 | 2 | 418 | 583 | 196 | 356 | 2.59e-32 | 129 |
MS.gene68740.t1 | AT4G38550 | 33.333 | 168 | 111 | 1 | 417 | 583 | 416 | 583 | 1.58e-26 | 114 |
MS.gene68740.t1 | AT4G38550 | 33.333 | 168 | 111 | 1 | 417 | 583 | 416 | 583 | 1.58e-26 | 114 |
MS.gene68740.t1 | AT4G38550 | 33.333 | 168 | 111 | 1 | 417 | 583 | 453 | 620 | 1.58e-26 | 115 |
MS.gene68740.t1 | AT4G38550 | 33.333 | 168 | 111 | 1 | 417 | 583 | 315 | 482 | 1.98e-26 | 114 |
MS.gene68740.t1 | AT4G38550 | 33.333 | 168 | 111 | 1 | 417 | 583 | 357 | 524 | 2.28e-26 | 114 |
MS.gene68740.t1 | AT2G20960 | 32.432 | 185 | 121 | 3 | 423 | 606 | 557 | 738 | 1.03e-25 | 112 |
MS.gene68740.t1 | AT2G20960 | 32.432 | 185 | 121 | 3 | 423 | 606 | 557 | 738 | 1.03e-25 | 112 |
MS.gene68740.t1 | AT2G20960 | 32.432 | 185 | 121 | 3 | 423 | 606 | 487 | 668 | 1.04e-25 | 112 |
MS.gene68740.t1 | AT2G20960 | 32.432 | 185 | 121 | 3 | 423 | 606 | 522 | 703 | 1.26e-25 | 112 |
MS.gene68740.t1 | AT4G38560 | 38.889 | 162 | 98 | 1 | 423 | 583 | 330 | 491 | 3.08e-25 | 110 |
MS.gene68740.t1 | AT4G38560 | 38.889 | 162 | 98 | 1 | 423 | 583 | 332 | 493 | 3.54e-25 | 110 |
MS.gene68740.t1 | AT5G11140 | 34.270 | 178 | 113 | 3 | 430 | 606 | 57 | 231 | 8.09e-25 | 103 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 196 | 356 | 2.99e-21 | 96.7 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 196 | 356 | 2.99e-21 | 96.7 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 334 | 494 | 3.85e-21 | 97.8 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 332 | 492 | 3.92e-21 | 97.8 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 359 | 519 | 4.75e-21 | 97.4 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 315 | 475 | 4.91e-21 | 97.4 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 317 | 477 | 5.10e-21 | 97.1 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 286 | 446 | 5.50e-21 | 97.1 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 288 | 448 | 5.93e-21 | 96.7 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 359 | 519 | 5.94e-21 | 97.4 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 225 | 385 | 6.75e-21 | 95.9 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 281 | 441 | 8.82e-21 | 96.3 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 315 | 475 | 9.87e-21 | 96.3 |
MS.gene68740.t1 | AT2G20950 | 34.161 | 161 | 105 | 1 | 424 | 583 | 315 | 475 | 9.87e-21 | 96.3 |
Find 142 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCGAACAACGTAACGGTATT+TGG | 0.124401 | 3.2:+93074658 | None:intergenic |
CTCAAACGATCTCTGATTTC+AGG | 0.204618 | 3.2:+93069149 | None:intergenic |
GAGTTGGCCTAGATCAATTT+TGG | 0.256726 | 3.2:-93073017 | MS.gene68740:intron |
GCCAGAGAAACTAAAATCTT+TGG | 0.259330 | 3.2:+93069685 | None:intergenic |
TGCACCAAAGACCCGGTTTC+CGG | 0.261045 | 3.2:+93074109 | None:intergenic |
CGGAAGAAGATTGTAATTCT+TGG | 0.286432 | 3.2:+93069432 | None:intergenic |
TCCTTTGGTGGCTGCTTCTC+AGG | 0.295727 | 3.2:+93073608 | None:intergenic |
CCATCCTTAACTTGATCTTT+AGG | 0.299650 | 3.2:+93069818 | None:intergenic |
TTATTGCACTGGTCTCCTTT+TGG | 0.304693 | 3.2:-93074347 | MS.gene68740:CDS |
CTTGAGCAGCTCATGTCTTC+AGG | 0.305135 | 3.2:-93069122 | MS.gene68740:CDS |
GCTTGATATATTCACTGAAA+TGG | 0.313676 | 3.2:+93073711 | None:intergenic |
CTTGACAAGTATGGTGATAT+AGG | 0.315358 | 3.2:-93069521 | MS.gene68740:CDS |
GTAACCAATTCTGATGAAAA+TGG | 0.318020 | 3.2:-93069719 | MS.gene68740:CDS |
TACAATGTCAAAGAAAGTTT+TGG | 0.326292 | 3.2:-93069563 | MS.gene68740:CDS |
GGCTTCAGGGAGCTTTGGAC+GGG | 0.327426 | 3.2:-93074003 | MS.gene68740:intron |
ACCACCGGAAACCGGGTCTT+TGG | 0.336386 | 3.2:-93074113 | MS.gene68740:CDS |
GATGAGATCATTCCTTCTTC+TGG | 0.358336 | 3.2:-93069973 | MS.gene68740:CDS |
TTGACAAGTATGGTGATATA+GGG | 0.359918 | 3.2:-93069520 | MS.gene68740:CDS |
ATTGTCTCTGCTACCATTGC+TGG | 0.361362 | 3.2:-93074534 | MS.gene68740:CDS |
CTTCTTCCTATGATCAATCT+TGG | 0.363222 | 3.2:+93070071 | None:intergenic |
AGTTCTTAAAACTCTTGAAA+TGG | 0.366221 | 3.2:-93074317 | MS.gene68740:CDS |
ACTTGTCAAGTATTGTTTGT+AGG | 0.367480 | 3.2:+93069534 | None:intergenic |
TGATACCTCTTGTGTTCCTT+TGG | 0.367997 | 3.2:+93073593 | None:intergenic |
ATGTGTAATTGAGCAGAAAT+TGG | 0.373749 | 3.2:+93069949 | None:intergenic |
CTTGATATATTCACTGAAAT+GGG | 0.374691 | 3.2:+93073712 | None:intergenic |
AATCGAGGAACTATACAAAA+AGG | 0.377398 | 3.2:-93073669 | MS.gene68740:CDS |
CACAGCGACAAAAGGTTTGC+TGG | 0.383857 | 3.2:-93073965 | MS.gene68740:CDS |
CGAACAACGTAACGGTATTT+GGG | 0.383918 | 3.2:+93074659 | None:intergenic |
CAAACAATACTTGACAAGTA+TGG | 0.386291 | 3.2:-93069530 | MS.gene68740:CDS |
TCTGAATCCCGTGTTTCAAT+TGG | 0.388960 | 3.2:-93069590 | MS.gene68740:CDS |
GATCTCTGATTTCAGGAATT+CGG | 0.392697 | 3.2:+93069156 | None:intergenic |
TATAGGGGCAAGCTGTGATT+TGG | 0.401703 | 3.2:-93069504 | MS.gene68740:CDS |
GACCAAAGTGAGTGAATTGT+TGG | 0.402832 | 3.2:-93069396 | MS.gene68740:CDS |
TTAAGACCACCACCGGAAAC+CGG | 0.405019 | 3.2:-93074121 | MS.gene68740:CDS |
GATTAGTCACCATCAGGATA+TGG | 0.405327 | 3.2:-93069288 | MS.gene68740:CDS |
TGTTTGGCTTCAGGGAGCTT+TGG | 0.408256 | 3.2:-93074008 | MS.gene68740:intron |
TGATCTATCTTTGACTTGAT+AGG | 0.411943 | 3.2:+93069074 | None:intergenic |
TACCTCTTGTGTTCCTTTGG+TGG | 0.421148 | 3.2:+93073596 | None:intergenic |
GAGAGCACGGAATGGCCTCC+TGG | 0.423509 | 3.2:+93074160 | None:intergenic |
TGAATTGTTGGATATTGTTA+AGG | 0.426225 | 3.2:-93069384 | MS.gene68740:CDS |
ATTACACATCCCAGATGTTA+TGG | 0.434766 | 3.2:-93069935 | MS.gene68740:intron |
ATTTGAACATACCTTCATAT+AGG | 0.435520 | 3.2:+93073871 | None:intergenic |
GGTGGAACACTTTGAAGAAC+AGG | 0.435930 | 3.2:+93070027 | None:intergenic |
AGGGACAGTACCATAACATC+TGG | 0.436687 | 3.2:+93069925 | None:intergenic |
GGCTAACTATGATCGTGAAA+TGG | 0.440278 | 3.2:-93069255 | MS.gene68740:CDS |
TCACCATCAGGATATGGAAA+TGG | 0.446433 | 3.2:-93069282 | MS.gene68740:CDS |
CATGGAGTGTGTATGCTTTG+TGG | 0.449719 | 3.2:-93069456 | MS.gene68740:CDS |
TGGCTTCAGGGAGCTTTGGA+CGG | 0.456348 | 3.2:-93074004 | MS.gene68740:intron |
CATAGTTAGTAAGGCCTACA+TGG | 0.460963 | 3.2:+93074460 | None:intergenic |
CCTCACTTTGGCCTCCATGT+AGG | 0.463629 | 3.2:-93074474 | MS.gene68740:CDS |
AAAGACCCGGTTTCCGGTGG+TGG | 0.468463 | 3.2:+93074115 | None:intergenic |
TAGTATCTATTTCTTTGTTG+TGG | 0.469830 | 3.2:+93069648 | None:intergenic |
TGAATTGATTAGTCACCATC+AGG | 0.473279 | 3.2:-93069294 | MS.gene68740:CDS |
ATCCAACAATTCACTCACTT+TGG | 0.473716 | 3.2:+93069394 | None:intergenic |
TTCCGTGCTCTCCTTGATGT+TGG | 0.475927 | 3.2:-93074149 | MS.gene68740:CDS |
TCTTATATTACTCAGGCAAC+CGG | 0.479611 | 3.2:-93074212 | MS.gene68740:intron |
TCTTTGTTGTGGAGAGGAAG+GGG | 0.483390 | 3.2:+93069659 | None:intergenic |
AGATTGTAGGCCAGCTAGGT+TGG | 0.483927 | 3.2:+93072967 | None:intergenic |
TTTGGTCTTACTTATTGAAT+CGG | 0.484588 | 3.2:+93069412 | None:intergenic |
GCAGCCTAAAGATCAAGTTA+AGG | 0.486423 | 3.2:-93069822 | MS.gene68740:intron |
GCTTCAGGGAGCTTTGGACG+GGG | 0.489494 | 3.2:-93074002 | MS.gene68740:intron |
ATACCGTTACGTTGTTCGAT+TGG | 0.490656 | 3.2:-93074654 | MS.gene68740:intron |
TACCTGCAGCATAGTTAGTA+AGG | 0.490657 | 3.2:+93074451 | None:intergenic |
GTCAAGTATTGTTTGTAGGA+TGG | 0.493819 | 3.2:+93069538 | None:intergenic |
ATTTGTATTTCCAACCTAGC+TGG | 0.494722 | 3.2:-93072977 | MS.gene68740:CDS |
TTCTTTGTTGTGGAGAGGAA+GGG | 0.496215 | 3.2:+93069658 | None:intergenic |
CTTCAGGGAGCTTTGGACGG+GGG | 0.497730 | 3.2:-93074001 | MS.gene68740:intron |
TGTGTAATTGAGCAGAAATT+GGG | 0.497868 | 3.2:+93069950 | None:intergenic |
TAAGAACTCGGCGAGCCAAA+AGG | 0.499289 | 3.2:+93074332 | None:intergenic |
CTTTGAAGAACAGGAGGTTG+TGG | 0.499804 | 3.2:+93070036 | None:intergenic |
ACTCAAGACGCTAACAAATA+CGG | 0.500093 | 3.2:-93074686 | MS.gene68740:CDS |
TCAGGATATGGAAATGGAAA+AGG | 0.500818 | 3.2:-93069276 | MS.gene68740:CDS |
TTTCTTTGTTGTGGAGAGGA+AGG | 0.502763 | 3.2:+93069657 | None:intergenic |
GAAATTCAAGAGAAGAAGAG+AGG | 0.503110 | 3.2:-93074744 | MS.gene68740:CDS |
GAAATAGATACTAGTAGCGA+AGG | 0.504275 | 3.2:-93069638 | MS.gene68740:CDS |
AGCTTGATGCTGAGGTTCAC+CGG | 0.506705 | 3.2:-93073922 | MS.gene68740:CDS |
AGAACAGCTAGAATCAGAGT+TGG | 0.506724 | 3.2:-93069222 | MS.gene68740:CDS |
TTTCCATTTCCATATCCTGA+TGG | 0.507099 | 3.2:+93069279 | None:intergenic |
GCCTGAGAAGCAGCCACCAA+AGG | 0.507172 | 3.2:-93073609 | MS.gene68740:CDS |
TAAAACTGAAACAAAGAAAG+AGG | 0.508090 | 3.2:-93069774 | MS.gene68740:CDS |
GCAGAAATTGGGCCAGAAGA+AGG | 0.508734 | 3.2:+93069961 | None:intergenic |
CTCATTCCAAGATTGATCAT+AGG | 0.510237 | 3.2:-93070077 | MS.gene68740:CDS |
ATATTCCTCACAGCGACAAA+AGG | 0.513989 | 3.2:-93073973 | MS.gene68740:CDS |
ATGTTACCAGCTTATTGCAC+TGG | 0.517859 | 3.2:-93074358 | MS.gene68740:intron |
CTGTGGAACCAGCTGACTCC+AGG | 0.519286 | 3.2:-93074178 | MS.gene68740:CDS |
GTTGATTCAGGCATTTGTGA+AGG | 0.519616 | 3.2:-93074804 | MS.gene68740:intron |
CCGGGTCTTTGGTGCACTCA+AGG | 0.524232 | 3.2:-93074102 | MS.gene68740:intron |
AAATTCAAGAGAAGAAGAGA+GGG | 0.524882 | 3.2:-93074743 | MS.gene68740:CDS |
AATGGCCTCCTGGAGTCAGC+TGG | 0.528100 | 3.2:+93074170 | None:intergenic |
TTGAGTAATCAAACGAACTC+TGG | 0.530507 | 3.2:+93074703 | None:intergenic |
GCACATGAGCTTCCTCACTT+TGG | 0.534108 | 3.2:-93074486 | MS.gene68740:CDS |
AATGAGATTGTAGGCCAGCT+AGG | 0.542596 | 3.2:+93072963 | None:intergenic |
GAAATGGATGATCAGTATGA+AGG | 0.545359 | 3.2:-93074301 | MS.gene68740:CDS |
CAAGATTGATCATAGGAAGA+AGG | 0.551150 | 3.2:-93070070 | MS.gene68740:CDS |
CTGCTCATCTTCGTGTAGCA+TGG | 0.552976 | 3.2:-93069352 | MS.gene68740:CDS |
GGTCTTGTTAAGACCACCAC+CGG | 0.557334 | 3.2:-93074128 | MS.gene68740:CDS |
TTCCACAGAATAATCCTCTC+CGG | 0.558152 | 3.2:+93074193 | None:intergenic |
CCTTGAGTGCACCAAAGACC+CGG | 0.561480 | 3.2:+93074102 | None:intergenic |
AGAATCAGAGTTGGAAACAT+TGG | 0.561728 | 3.2:-93069213 | MS.gene68740:CDS |
GGCCTTACTAACTATGCTGC+AGG | 0.566671 | 3.2:-93074453 | MS.gene68740:intron |
GAAATCACCTTGCCTTGTGG+TGG | 0.569736 | 3.2:+93072940 | None:intergenic |
TAAGACCACCACCGGAAACC+GGG | 0.570064 | 3.2:-93074120 | MS.gene68740:CDS |
TGTAATGAGGTCATATTACA+TGG | 0.570115 | 3.2:-93069474 | MS.gene68740:CDS |
ACATGTTGCTGCCTATATGA+AGG | 0.573009 | 3.2:-93073882 | MS.gene68740:intron |
TTGTGGTGGAATGAGATTGT+AGG | 0.574520 | 3.2:+93072954 | None:intergenic |
GATTGAGGGATCTGCACGAA+TGG | 0.575419 | 3.2:+93073637 | None:intergenic |
TAATCAAACGAACTCTGGCT+CGG | 0.582000 | 3.2:+93074708 | None:intergenic |
AAGAACAATATCACCAGCAA+TGG | 0.583771 | 3.2:+93074521 | None:intergenic |
CTATGATCAATCTTGGAATG+AGG | 0.584964 | 3.2:+93070078 | None:intergenic |
TCTATTTCTTTGTTGTGGAG+AGG | 0.590301 | 3.2:+93069653 | None:intergenic |
CTTTGACTTGATAGGTAGCG+TGG | 0.591078 | 3.2:+93069082 | None:intergenic |
TTCAGTGAATATATCAAGCG+TGG | 0.592838 | 3.2:-93073707 | MS.gene68740:CDS |
AAGCGTGGAATTGAAGCGGA+TGG | 0.593465 | 3.2:-93073692 | MS.gene68740:CDS |
TCTCATTCCACCACAAGGCA+AGG | 0.593883 | 3.2:-93072947 | MS.gene68740:intron |
GATTGATCATAGGAAGAAGG+TGG | 0.597603 | 3.2:-93070067 | MS.gene68740:CDS |
GACCAACATCAAGGAGAGCA+CGG | 0.604422 | 3.2:+93074147 | None:intergenic |
TTACCAATCGAACAACGTAA+CGG | 0.610329 | 3.2:+93074651 | None:intergenic |
CCTAAAGATCAAGTTAAGGA+TGG | 0.613275 | 3.2:-93069818 | MS.gene68740:CDS |
ATTTGGAATCAGTTGTAATG+AGG | 0.618166 | 3.2:-93069487 | MS.gene68740:CDS |
TCTTAACAAGACCAACATCA+AGG | 0.618405 | 3.2:+93074138 | None:intergenic |
ACCAAAGACCCGGTTTCCGG+TGG | 0.622290 | 3.2:+93074112 | None:intergenic |
ATCAATCTTGGAATGAGGAG+TGG | 0.623309 | 3.2:+93070083 | None:intergenic |
TGACAAGTATGGTGATATAG+GGG | 0.624821 | 3.2:-93069519 | MS.gene68740:CDS |
ATTGGCTCAGAAAGAACAAG+AGG | 0.625513 | 3.2:-93069195 | MS.gene68740:CDS |
TATCAAGCGTGGAATTGAAG+CGG | 0.625635 | 3.2:-93073696 | MS.gene68740:CDS |
TACAATCTCATTCCACCACA+AGG | 0.626292 | 3.2:-93072952 | MS.gene68740:CDS |
AGTTAAGGATGGTGCTACTG+AGG | 0.634421 | 3.2:-93069807 | MS.gene68740:CDS |
AATTCTGATGAAAATGGTGA+AGG | 0.635334 | 3.2:-93069713 | MS.gene68740:CDS |
TCTGATGAAAATGGTGAAGG+TGG | 0.638359 | 3.2:-93069710 | MS.gene68740:CDS |
GGGACAGTACCATAACATCT+GGG | 0.646171 | 3.2:+93069926 | None:intergenic |
ATTGATCATAGGAAGAAGGT+GGG | 0.646766 | 3.2:-93070066 | MS.gene68740:CDS |
TCAGAAATCACCTTGCCTTG+TGG | 0.649160 | 3.2:+93072937 | None:intergenic |
GGAACACTTTGAAGAACAGG+AGG | 0.650409 | 3.2:+93070030 | None:intergenic |
AATTGAAGCGGATGGAATCG+AGG | 0.652387 | 3.2:-93073684 | MS.gene68740:CDS |
ACATCAAGGAGAGCACGGAA+TGG | 0.653230 | 3.2:+93074152 | None:intergenic |
AGCCACCAAAGGAACACAAG+AGG | 0.664029 | 3.2:-93073598 | MS.gene68740:intron |
TATTACTCAGGCAACCGGAG+AGG | 0.678581 | 3.2:-93074207 | MS.gene68740:intron |
TGGAACCAGCTGACTCCAGG+AGG | 0.680812 | 3.2:-93074175 | MS.gene68740:CDS |
CCTACATGGAGGCCAAAGTG+AGG | 0.682005 | 3.2:+93074474 | None:intergenic |
AGTTAGTAAGGCCTACATGG+AGG | 0.688944 | 3.2:+93074463 | None:intergenic |
AACCGGAGAGGATTATTCTG+TGG | 0.701124 | 3.2:-93074195 | MS.gene68740:CDS |
TCAGTATGAAGGCAATGTTG+AGG | 0.719344 | 3.2:-93074290 | MS.gene68740:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATAAAAATTTGTCAA+TGG | - | chr3.2:93072822-93072841 | MS.gene68740:intron | 10.0% |
!! | ATAGTGTTTAAATATATATA+TGG | + | chr3.2:93074078-93074097 | None:intergenic | 10.0% |
!! | TAAGAAAAACAAAAAAAAAA+TGG | + | chr3.2:93072535-93072554 | None:intergenic | 10.0% |
!! | TACAAATTAAAAAAATGAAA+AGG | + | chr3.2:93070107-93070126 | None:intergenic | 10.0% |
!! | TTAATTTAAATTATAAGTGT+TGG | + | chr3.2:93073561-93073580 | None:intergenic | 10.0% |
!! | TTTGATTAAAAAAAAAATAG+TGG | - | chr3.2:93072406-93072425 | MS.gene68740:intron | 10.0% |
!!! | TATTTTTTACTTAACAATTT+TGG | - | chr3.2:93071227-93071246 | MS.gene68740:intron | 10.0% |
!!! | TTTCATTTTTTTAATTTGTA+AGG | - | chr3.2:93070107-93070126 | MS.gene68740:intron | 10.0% |
!!! | TTTTTACAAAAATAAATAGA+GGG | - | chr3.2:93073454-93073473 | MS.gene68740:intron | 10.0% |
!!! | TTTTTTACAAAAATAAATAG+AGG | - | chr3.2:93073453-93073472 | MS.gene68740:intron | 10.0% |
!! | AAAAATAATGTGAAAATAGA+GGG | - | chr3.2:93072027-93072046 | MS.gene68740:intron | 15.0% |
!! | AATAATAGAAAGGTTATTAA+TGG | - | chr3.2:93073297-93073316 | MS.gene68740:intron | 15.0% |
!! | CAAAAAAAAAAAAAAACTGT+CGG | - | chr3.2:93070889-93070908 | MS.gene68740:intron | 15.0% |
!! | TGACATTGATATTTATTAAT+CGG | - | chr3.2:93069902-93069921 | MS.gene68740:intron | 15.0% |
!! | TTTCAAGATAAATTATTCTT+TGG | + | chr3.2:93071439-93071458 | None:intergenic | 15.0% |
!!! | ATATATGGTTTATTATCTTT+TGG | + | chr3.2:93074063-93074082 | None:intergenic | 15.0% |
!!! | CGATTAATTTGATAATTATA+TGG | + | chr3.2:93069551-93069570 | None:intergenic | 15.0% |
!!! | GGTTAATTTCTTTTATTAAA+TGG | - | chr3.2:93071707-93071726 | MS.gene68740:intron | 15.0% |
!!! | TAATTATATGGATTAAAAAG+AGG | + | chr3.2:93069539-93069558 | None:intergenic | 15.0% |
!!! | TCAAAGACAAAAAAATATTT+TGG | + | chr3.2:93072391-93072410 | None:intergenic | 15.0% |
!!! | TTATTGTTTTCTTCTTAAAA+AGG | - | chr3.2:93071133-93071152 | MS.gene68740:intron | 15.0% |
!!! | TTTGGTTTTATATTAACAAA+AGG | + | chr3.2:93074045-93074064 | None:intergenic | 15.0% |
!! | AAAAGAAAGAAAACAAATGT+AGG | - | chr3.2:93072188-93072207 | MS.gene68740:intron | 20.0% |
!! | AAATACTACTAATTCAAACA+GGG | + | chr3.2:93070419-93070438 | None:intergenic | 20.0% |
!! | AAGTAATAGCAATAATAGAA+AGG | - | chr3.2:93073287-93073306 | MS.gene68740:intron | 20.0% |
!! | ATAAAATAAGATCAAATTGC+AGG | - | chr3.2:93073828-93073847 | MS.gene68740:intron | 20.0% |
!! | ATAGATATTCCACAAAAAAT+AGG | + | chr3.2:93072696-93072715 | None:intergenic | 20.0% |
!! | ATGTTATCATTATACTGTTT+GGG | - | chr3.2:93070825-93070844 | MS.gene68740:intron | 20.0% |
!! | CAAAAATAATGTGAAAATAG+AGG | - | chr3.2:93072026-93072045 | MS.gene68740:intron | 20.0% |
!! | GACATTGATATTTATTAATC+GGG | - | chr3.2:93069903-93069922 | MS.gene68740:intron | 20.0% |
!! | GACTAGAGATAAAAAAAAAA+TGG | - | chr3.2:93072724-93072743 | MS.gene68740:intron | 20.0% |
!! | GTTCAAATAATGTCTTTATT+GGG | - | chr3.2:93070080-93070099 | MS.gene68740:CDS | 20.0% |
!! | TATGTTATCATTATACTGTT+TGG | - | chr3.2:93070824-93070843 | MS.gene68740:intron | 20.0% |
!! | TCTACAAGTAGTAATAATAA+TGG | + | chr3.2:93069359-93069378 | None:intergenic | 20.0% |
!! | TGTTCAAATAATGTCTTTAT+TGG | - | chr3.2:93070079-93070098 | MS.gene68740:CDS | 20.0% |
!!! | AAAAAAAAACCTTTTTACAG+AGG | - | chr3.2:93071162-93071181 | MS.gene68740:intron | 20.0% |
!!! | AATAATAATGGTTTTGGTTA+GGG | + | chr3.2:93069347-93069366 | None:intergenic | 20.0% |
!!! | ACTTTAGATTATATCAGTTT+TGG | - | chr3.2:93070714-93070733 | MS.gene68740:intron | 20.0% |
!!! | AGTAGTAATAATAATGGTTT+TGG | + | chr3.2:93069353-93069372 | None:intergenic | 20.0% |
!!! | ATCAATTTTGGATCTTTTAT+TGG | - | chr3.2:93070931-93070950 | MS.gene68740:intron | 20.0% |
!!! | ATGTAGTATTTTTTAGAGAA+GGG | - | chr3.2:93071905-93071924 | MS.gene68740:intron | 20.0% |
!!! | ATTTTTTTTGTAGACATTGA+TGG | - | chr3.2:93070177-93070196 | MS.gene68740:intron | 20.0% |
!!! | CAGTTTTTTTTTTTTTTTGC+TGG | + | chr3.2:93070888-93070907 | None:intergenic | 20.0% |
!!! | CTTTTTACATTTGAATTACA+TGG | - | chr3.2:93071622-93071641 | MS.gene68740:intron | 20.0% |
!!! | GTATTAGTATTTTGAAACAA+TGG | - | chr3.2:93071288-93071307 | MS.gene68740:intron | 20.0% |
!!! | TAATAATAATGGTTTTGGTT+AGG | + | chr3.2:93069348-93069367 | None:intergenic | 20.0% |
!!! | TCAATTATCTTTTCAATGAT+CGG | - | chr3.2:93072469-93072488 | MS.gene68740:intron | 20.0% |
!!! | TGTTTTTTCTTTTCTTTTGA+AGG | - | chr3.2:93072252-93072271 | MS.gene68740:intron | 20.0% |
!!! | TTCTTTGTTTCAGTTTTATT+GGG | + | chr3.2:93074160-93074179 | None:intergenic | 20.0% |
!!! | TTTAAATTATAAGTGTTGGT+TGG | + | chr3.2:93073557-93073576 | None:intergenic | 20.0% |
!!! | TTTCTTTGTTTCAGTTTTAT+TGG | + | chr3.2:93074161-93074180 | None:intergenic | 20.0% |
!!! | TTTTTGTTATGAGAATAATG+TGG | + | chr3.2:93073942-93073961 | None:intergenic | 20.0% |
! | AAAAGATCCAAAATTGATCT+AGG | + | chr3.2:93070929-93070948 | None:intergenic | 25.0% |
! | AAATCCAACTAGAAAGAAAT+TGG | - | chr3.2:93073097-93073116 | MS.gene68740:intron | 25.0% |
! | AACAGCAAGAAATTATATTC+TGG | + | chr3.2:93070795-93070814 | None:intergenic | 25.0% |
! | AATAGAAAGGTTATTAATGG+AGG | - | chr3.2:93073300-93073319 | MS.gene68740:intron | 25.0% |
! | AATAGAGGGTTTATGAAAAA+TGG | - | chr3.2:93073468-93073487 | MS.gene68740:intron | 25.0% |
! | AATCCAACTAGAAAGAAATT+GGG | - | chr3.2:93073098-93073117 | MS.gene68740:intron | 25.0% |
! | AATGAAATGGTCAAACAAAA+TGG | + | chr3.2:93073681-93073700 | None:intergenic | 25.0% |
! | AATGAATTGAGAAAGATTGA+AGG | + | chr3.2:93072933-93072952 | None:intergenic | 25.0% |
! | AGAAAATGACAAAGCAAAAT+AGG | - | chr3.2:93072056-93072075 | MS.gene68740:intron | 25.0% |
! | AGAAATTATATTCTGGATTC+TGG | + | chr3.2:93070788-93070807 | None:intergenic | 25.0% |
! | AGTTCTTAAAACTCTTGAAA+TGG | - | chr3.2:93069619-93069638 | MS.gene68740:CDS | 25.0% |
! | ATGAATTGAGAAAGATTGAA+GGG | + | chr3.2:93072932-93072951 | None:intergenic | 25.0% |
! | ATTAACAAAAGGTTGTGTAA+AGG | + | chr3.2:93074034-93074053 | None:intergenic | 25.0% |
! | ATTTGAACATACCTTCATAT+AGG | + | chr3.2:93070068-93070087 | None:intergenic | 25.0% |
! | CAACAAAAATTTGACGATTA+AGG | + | chr3.2:93070684-93070703 | None:intergenic | 25.0% |
! | CTTACAACAATTAATTAGCT+AGG | + | chr3.2:93073038-93073057 | None:intergenic | 25.0% |
! | CTTGATATATTCACTGAAAT+GGG | + | chr3.2:93070227-93070246 | None:intergenic | 25.0% |
! | GAAATACTACTAATTCAAAC+AGG | + | chr3.2:93070420-93070439 | None:intergenic | 25.0% |
! | GAGTAATATAAGACATACAA+AGG | + | chr3.2:93069717-93069736 | None:intergenic | 25.0% |
! | GGATACATATGAATTTATAG+CGG | - | chr3.2:93072427-93072446 | MS.gene68740:intron | 25.0% |
! | GTTAGTTAGTTAGTTAAAAG+AGG | + | chr3.2:93069100-93069119 | None:intergenic | 25.0% |
! | TAAAACTGAAACAAAGAAAG+AGG | - | chr3.2:93074162-93074181 | MS.gene68740:CDS | 25.0% |
! | TAGGGATTGAAAATTAAGTA+TGG | + | chr3.2:93069329-93069348 | None:intergenic | 25.0% |
! | TATTAGATTGAATACGTTAG+TGG | + | chr3.2:93073508-93073527 | None:intergenic | 25.0% |
! | TGAATTGTTGGATATTGTTA+AGG | - | chr3.2:93074552-93074571 | MS.gene68740:CDS | 25.0% |
! | TGTGTAAACCATATAATTCT+CGG | + | chr3.2:93071830-93071849 | None:intergenic | 25.0% |
! | TGTTATCATTATACTGTTTG+GGG | - | chr3.2:93070826-93070845 | MS.gene68740:intron | 25.0% |
! | TTAACAAAAGGTTGTGTAAA+GGG | + | chr3.2:93074033-93074052 | None:intergenic | 25.0% |
! | TTATATAGTTAGCACATGTT+TGG | - | chr3.2:93072118-93072137 | MS.gene68740:intron | 25.0% |
! | TTATGTATAGTAGTTGTATG+TGG | - | chr3.2:93071871-93071890 | MS.gene68740:intron | 25.0% |
! | TTGTATGTCTTATATTACTC+AGG | - | chr3.2:93069717-93069736 | MS.gene68740:CDS | 25.0% |
!! | ACCAAAAGAACTTGTATTTT+AGG | - | chr3.2:93071545-93071564 | MS.gene68740:intron | 25.0% |
!! | ACTTTTATGTATTTCACATG+TGG | - | chr3.2:93071686-93071705 | MS.gene68740:intron | 25.0% |
!! | ATTTATTAATCGGGTTTGTT+TGG | - | chr3.2:93069912-93069931 | MS.gene68740:intron | 25.0% |
!! | GACTATTTACTATTGATGAT+TGG | - | chr3.2:93070381-93070400 | MS.gene68740:intron | 25.0% |
!! | TACAATGTCAAAGAAAGTTT+TGG | - | chr3.2:93074373-93074392 | MS.gene68740:intron | 25.0% |
!! | TAGTATCTATTTCTTTGTTG+TGG | + | chr3.2:93074291-93074310 | None:intergenic | 25.0% |
!! | TCCTAAAATACAAGTTCTTT+TGG | + | chr3.2:93071549-93071568 | None:intergenic | 25.0% |
!! | TGTATTTTCCAATTGAAACA+CGG | + | chr3.2:93074357-93074376 | None:intergenic | 25.0% |
!!! | AAATGGGTTTGATATTTTTC+AGG | + | chr3.2:93070211-93070230 | None:intergenic | 25.0% |
!!! | ATTATATCAGTTTTGGACTA+TGG | - | chr3.2:93070721-93070740 | MS.gene68740:intron | 25.0% |
!!! | CATGTAGTATTTTTTAGAGA+AGG | - | chr3.2:93071904-93071923 | MS.gene68740:intron | 25.0% |
!!! | TAAAGAATGTTTGTTGATTC+AGG | - | chr3.2:93069120-93069139 | MS.gene68740:CDS | 25.0% |
!!! | TCTTTGTTTCAGTTTTATTG+GGG | + | chr3.2:93074159-93074178 | None:intergenic | 25.0% |
!!! | TTTCAAGAGTTTTAAGAACT+CGG | + | chr3.2:93069619-93069638 | None:intergenic | 25.0% |
!!! | TTTGGTCTTACTTATTGAAT+CGG | + | chr3.2:93074527-93074546 | None:intergenic | 25.0% |
!!! | TTTTCTTTTCTTTTGAAGGA+AGG | - | chr3.2:93072256-93072275 | MS.gene68740:intron | 25.0% |
AAAGAAAACAAATGTAGGAG+TGG | - | chr3.2:93072193-93072212 | MS.gene68740:intron | 30.0% | |
AAATTCAAGAGAAGAAGAGA+GGG | - | chr3.2:93069193-93069212 | MS.gene68740:CDS | 30.0% | |
AATCGAGGAACTATACAAAA+AGG | - | chr3.2:93070267-93070286 | MS.gene68740:intron | 30.0% | |
AATTCTGATGAAAATGGTGA+AGG | - | chr3.2:93074223-93074242 | MS.gene68740:intron | 30.0% | |
ACAATTAATTAGCTAGGACT+AGG | + | chr3.2:93073032-93073051 | None:intergenic | 30.0% | |
ACCAATCCATTCTAATGAAA+TGG | + | chr3.2:93073694-93073713 | None:intergenic | 30.0% | |
ACCATTTCATTAGAATGGAT+TGG | - | chr3.2:93073690-93073709 | MS.gene68740:CDS | 30.0% | |
AGGAAATTCAAGCTAAACAA+TGG | + | chr3.2:93070664-93070683 | None:intergenic | 30.0% | |
ATGTGTAATTGAGCAGAAAT+TGG | + | chr3.2:93073990-93074009 | None:intergenic | 30.0% | |
ATTGTACATGTTTGTCATGT+TGG | - | chr3.2:93072637-93072656 | MS.gene68740:intron | 30.0% | |
ATTTCAATCGCATAAAGAGT+TGG | + | chr3.2:93071994-93072013 | None:intergenic | 30.0% | |
CAAACAATACTTGACAAGTA+TGG | - | chr3.2:93074406-93074425 | MS.gene68740:intron | 30.0% | |
CAGCATTCACTTTGATTATT+TGG | - | chr3.2:93071953-93071972 | MS.gene68740:intron | 30.0% | |
CCAAGTCTTAAAAGTTCATT+AGG | + | chr3.2:93071516-93071535 | None:intergenic | 30.0% | |
GCTTGATATATTCACTGAAA+TGG | + | chr3.2:93070228-93070247 | None:intergenic | 30.0% | |
GGATTATGATAGTTATCAAG+CGG | + | chr3.2:93073011-93073030 | None:intergenic | 30.0% | |
GTAACCAATTCTGATGAAAA+TGG | - | chr3.2:93074217-93074236 | MS.gene68740:intron | 30.0% | |
GTATTCATCCGAGAATTATA+TGG | - | chr3.2:93071819-93071838 | MS.gene68740:intron | 30.0% | |
GTTAGTTAGTTAAAAGAGGA+TGG | + | chr3.2:93069096-93069115 | None:intergenic | 30.0% | |
GTTATCATTATACTGTTTGG+GGG | - | chr3.2:93070827-93070846 | MS.gene68740:intron | 30.0% | |
GTTTGACCATTTCATTAGAA+TGG | - | chr3.2:93073685-93073704 | MS.gene68740:CDS | 30.0% | |
TATCAATGTCACAAGAATAG+AGG | + | chr3.2:93069893-93069912 | None:intergenic | 30.0% | |
TGAAAATTAAGTATGGAGTG+TGG | + | chr3.2:93069322-93069341 | None:intergenic | 30.0% | |
TGAATTGAGAAAGATTGAAG+GGG | + | chr3.2:93072931-93072950 | None:intergenic | 30.0% | |
TGTAATGAGGTCATATTACA+TGG | - | chr3.2:93074462-93074481 | MS.gene68740:CDS | 30.0% | |
TGTGTAATTGAGCAGAAATT+GGG | + | chr3.2:93073989-93074008 | None:intergenic | 30.0% | |
TGTGTGAATAGAATTATCTC+TGG | + | chr3.2:93072569-93072588 | None:intergenic | 30.0% | |
TTGACAAGTATGGTGATATA+GGG | - | chr3.2:93074416-93074435 | MS.gene68740:intron | 30.0% | |
TTTCAATCGCATAAAGAGTT+GGG | + | chr3.2:93071993-93072012 | None:intergenic | 30.0% | |
! | AACCTTTTTACAGAGGAAAA+AGG | - | chr3.2:93071169-93071188 | MS.gene68740:intron | 30.0% |
! | ACTTGTCAAGTATTGTTTGT+AGG | + | chr3.2:93074405-93074424 | None:intergenic | 30.0% |
! | ATACCCAATTTCTTTCTAGT+TGG | + | chr3.2:93073104-93073123 | None:intergenic | 30.0% |
! | ATTTGGAATCAGTTGTAATG+AGG | - | chr3.2:93074449-93074468 | MS.gene68740:intron | 30.0% |
! | CGTCAAATTTTTGTTGCATA+TGG | - | chr3.2:93070688-93070707 | MS.gene68740:intron | 30.0% |
! | CTACACTTTTCATTTCTATG+TGG | - | chr3.2:93069683-93069702 | MS.gene68740:CDS | 30.0% |
! | GAAAGCTTTAGTTGTGTAAA+CGG | - | chr3.2:93071455-93071474 | MS.gene68740:intron | 30.0% |
! | GTATTTTCCAATTGAAACAC+GGG | + | chr3.2:93074356-93074375 | None:intergenic | 30.0% |
! | TTCACCATTTTCATCAGAAT+TGG | + | chr3.2:93074224-93074243 | None:intergenic | 30.0% |
! | TTTTCATCAGAATTGGTTAC+TGG | + | chr3.2:93074217-93074236 | None:intergenic | 30.0% |
!! | GTGATGATGGAAATTCTATA+TGG | - | chr3.2:93072847-93072866 | MS.gene68740:intron | 30.0% |
!! | TGATCTATCTTTGACTTGAT+AGG | + | chr3.2:93074865-93074884 | None:intergenic | 30.0% |
!! | TTTGTGTGTGTATTTTTGAG+AGG | - | chr3.2:93071413-93071432 | MS.gene68740:intron | 30.0% |
!!! | CCTAATGAACTTTTAAGACT+TGG | - | chr3.2:93071513-93071532 | MS.gene68740:intron | 30.0% |
!!! | TAATCTCTGCCTATTTTTTG+TGG | - | chr3.2:93072684-93072703 | MS.gene68740:intron | 30.0% |
!!! | TCCAAAGATTTTAGTTTCTC+TGG | - | chr3.2:93074250-93074269 | MS.gene68740:intron | 30.0% |
!!! | TGAGAATAATGTGGTTTTGT+TGG | + | chr3.2:93073933-93073952 | None:intergenic | 30.0% |
AAAAAAGTCTCAAACTCCAC+AGG | + | chr3.2:93070140-93070159 | None:intergenic | 35.0% | |
AAACAAATGTAGGAGTGGAA+TGG | - | chr3.2:93072198-93072217 | MS.gene68740:intron | 35.0% | |
AAATCGAAACAAGTCTATCC+AGG | + | chr3.2:93070752-93070771 | None:intergenic | 35.0% | |
AAGAACAATATCACCAGCAA+TGG | + | chr3.2:93069418-93069437 | None:intergenic | 35.0% | |
AATGTGAAAATAGAGGGAGA+GGG | - | chr3.2:93072033-93072052 | MS.gene68740:intron | 35.0% | |
ACTCAAGACGCTAACAAATA+CGG | - | chr3.2:93069250-93069269 | MS.gene68740:CDS | 35.0% | |
AGAATCAGAGTTGGAAACAT+TGG | - | chr3.2:93074723-93074742 | MS.gene68740:CDS | 35.0% | |
ATACGTATATACTCCGTCAA+AGG | + | chr3.2:93072781-93072800 | None:intergenic | 35.0% | |
ATCATCTTCATGATCAGTCT+TGG | - | chr3.2:93071372-93071391 | MS.gene68740:intron | 35.0% | |
ATCCAACAATTCACTCACTT+TGG | + | chr3.2:93074545-93074564 | None:intergenic | 35.0% | |
ATTACACATCCCAGATGTTA+TGG | - | chr3.2:93074001-93074020 | MS.gene68740:intron | 35.0% | |
ATTCTATTCACACAACGTCA+TGG | - | chr3.2:93072575-93072594 | MS.gene68740:intron | 35.0% | |
ATTGATCATAGGAAGAAGGT+GGG | - | chr3.2:93073870-93073889 | MS.gene68740:intron | 35.0% | |
ATTTGTATTTCCAACCTAGC+TGG | - | chr3.2:93070959-93070978 | MS.gene68740:intron | 35.0% | |
CAAGATTGATCATAGGAAGA+AGG | - | chr3.2:93073866-93073885 | MS.gene68740:intron | 35.0% | |
CCTAAAGATCAAGTTAAGGA+TGG | - | chr3.2:93074118-93074137 | MS.gene68740:CDS | 35.0% | |
CGGAAGAAGATTGTAATTCT+TGG | + | chr3.2:93074507-93074526 | None:intergenic | 35.0% | |
CGTTTACATGTGTAGTAAGT+AGG | - | chr3.2:93073642-93073661 | MS.gene68740:CDS | 35.0% | |
CTATGATCAATCTTGGAATG+AGG | + | chr3.2:93073861-93073880 | None:intergenic | 35.0% | |
CTCATTCCAAGATTGATCAT+AGG | - | chr3.2:93073859-93073878 | MS.gene68740:intron | 35.0% | |
CTTCTTCCTATGATCAATCT+TGG | + | chr3.2:93073868-93073887 | None:intergenic | 35.0% | |
CTTGACAAGTATGGTGATAT+AGG | - | chr3.2:93074415-93074434 | MS.gene68740:intron | 35.0% | |
GAAATAGATACTAGTAGCGA+AGG | - | chr3.2:93074298-93074317 | MS.gene68740:CDS | 35.0% | |
GAAATGGATGATCAGTATGA+AGG | - | chr3.2:93069635-93069654 | MS.gene68740:CDS | 35.0% | |
GAAATTCAAGAGAAGAAGAG+AGG | - | chr3.2:93069192-93069211 | MS.gene68740:CDS | 35.0% | |
GATCTCTGATTTCAGGAATT+CGG | + | chr3.2:93074783-93074802 | None:intergenic | 35.0% | |
GCCAGAGAAACTAAAATCTT+TGG | + | chr3.2:93074254-93074273 | None:intergenic | 35.0% | |
TAATGTGAAAATAGAGGGAG+AGG | - | chr3.2:93072032-93072051 | MS.gene68740:intron | 35.0% | |
TAGATGATGTCTAGTAGCAA+CGG | - | chr3.2:93073165-93073184 | MS.gene68740:intron | 35.0% | |
TCAGGATATGGAAATGGAAA+AGG | - | chr3.2:93074660-93074679 | MS.gene68740:CDS | 35.0% | |
TCTTAACAAGACCAACATCA+AGG | + | chr3.2:93069801-93069820 | None:intergenic | 35.0% | |
TCTTATATTACTCAGGCAAC+CGG | - | chr3.2:93069724-93069743 | MS.gene68740:CDS | 35.0% | |
TGACAAGTATGGTGATATAG+GGG | - | chr3.2:93074417-93074436 | MS.gene68740:intron | 35.0% | |
TGCAGGAGATAAAAATGTGT+TGG | + | chr3.2:93073730-93073749 | None:intergenic | 35.0% | |
TTACCAATCGAACAACGTAA+CGG | + | chr3.2:93069288-93069307 | None:intergenic | 35.0% | |
TTCAGTGAATATATCAAGCG+TGG | - | chr3.2:93070229-93070248 | MS.gene68740:intron | 35.0% | |
TTGAGTAATCAAACGAACTC+TGG | + | chr3.2:93069236-93069255 | None:intergenic | 35.0% | |
TTGGCATCACACTTATGATA+AGG | + | chr3.2:93073369-93073388 | None:intergenic | 35.0% | |
TTTCCATTTCCATATCCTGA+TGG | + | chr3.2:93074660-93074679 | None:intergenic | 35.0% | |
! | CACCTTTTTCCTCTGTAAAA+AGG | + | chr3.2:93071174-93071193 | None:intergenic | 35.0% |
! | CCATCCTTAACTTGATCTTT+AGG | + | chr3.2:93074121-93074140 | None:intergenic | 35.0% |
! | GTCAAGTATTGTTTGTAGGA+TGG | + | chr3.2:93074401-93074420 | None:intergenic | 35.0% |
! | TACTATTGATGATTGGCAAG+TGG | - | chr3.2:93070388-93070407 | MS.gene68740:intron | 35.0% |
! | TCTATTTCTTTGTTGTGGAG+AGG | + | chr3.2:93074286-93074305 | None:intergenic | 35.0% |
! | TGAATTGATTAGTCACCATC+AGG | - | chr3.2:93074642-93074661 | MS.gene68740:intron | 35.0% |
!! | AACACAAGAGGTATCACATT+AGG | - | chr3.2:93070350-93070369 | MS.gene68740:intron | 35.0% |
!! | TTCACCGGAAGTACATTTTT+GGG | - | chr3.2:93070029-93070048 | MS.gene68740:CDS | 35.0% |
!! | TTCTCAGGCTTTTTGATTGA+GGG | + | chr3.2:93070316-93070335 | None:intergenic | 35.0% |
!! | TTTGGTTCCCTTTGTCTTTT+GGG | + | chr3.2:93073241-93073260 | None:intergenic | 35.0% |
!! | TTTTGGACTATGGATTATCC+TGG | - | chr3.2:93070731-93070750 | MS.gene68740:intron | 35.0% |
!!! | GAATAATGTGGTTTTGTTGG+TGG | + | chr3.2:93073930-93073949 | None:intergenic | 35.0% |
!!! | TGAGTTGGAGTTTTGTTTCT+CGG | - | chr3.2:93071204-93071223 | MS.gene68740:intron | 35.0% |
!!! | TTGTTTCAGTTTTATTGGGG+AGG | + | chr3.2:93074156-93074175 | None:intergenic | 35.0% |
AACTGTCGGAATTTGTGAGT+TGG | - | chr3.2:93070903-93070922 | MS.gene68740:intron | 40.0% | |
ACAAGAATAGAGGACATAGG+TGG | + | chr3.2:93069883-93069902 | None:intergenic | 40.0% | |
ACATGTTGCTGCCTATATGA+AGG | - | chr3.2:93070054-93070073 | MS.gene68740:CDS | 40.0% | |
ACCATGGAGGAGTCAATAAA+TGG | - | chr3.2:93072896-93072915 | MS.gene68740:intron | 40.0% | |
ACGATGAGTGAAATTGGGTT+GGG | - | chr3.2:93070630-93070649 | MS.gene68740:intron | 40.0% | |
AGAACAGCTAGAATCAGAGT+TGG | - | chr3.2:93074714-93074733 | MS.gene68740:CDS | 40.0% | |
AGGATGACGATGAGTGAAAT+TGG | - | chr3.2:93070624-93070643 | MS.gene68740:intron | 40.0% | |
AGGTGTCTGATAATCTGAGT+TGG | - | chr3.2:93071189-93071208 | MS.gene68740:intron | 40.0% | |
ATACCGTTACGTTGTTCGAT+TGG | - | chr3.2:93069282-93069301 | MS.gene68740:CDS | 40.0% | |
ATATTCCTCACAGCGACAAA+AGG | - | chr3.2:93069963-93069982 | MS.gene68740:CDS | 40.0% | |
ATCAATCTTGGAATGAGGAG+TGG | + | chr3.2:93073856-93073875 | None:intergenic | 40.0% | |
ATGTTACCAGCTTATTGCAC+TGG | - | chr3.2:93069578-93069597 | MS.gene68740:CDS | 40.0% | |
CAAGAATAGAGGACATAGGT+GGG | + | chr3.2:93069882-93069901 | None:intergenic | 40.0% | |
CATAGTTAGTAAGGCCTACA+TGG | + | chr3.2:93069479-93069498 | None:intergenic | 40.0% | |
CGAACAACGTAACGGTATTT+GGG | + | chr3.2:93069280-93069299 | None:intergenic | 40.0% | |
CGAGGAAAGAAAGACAAAGT+TGG | - | chr3.2:93070556-93070575 | MS.gene68740:intron | 40.0% | |
CTAGAAGACAAGACCTTTGA+CGG | - | chr3.2:93072765-93072784 | MS.gene68740:intron | 40.0% | |
CTCAAACGATCTCTGATTTC+AGG | + | chr3.2:93074790-93074809 | None:intergenic | 40.0% | |
CTTCGAGTACACCATTCTTT+GGG | + | chr3.2:93072148-93072167 | None:intergenic | 40.0% | |
CTTTGTCTTTCTTTCCTCGT+AGG | + | chr3.2:93070555-93070574 | None:intergenic | 40.0% | |
GAAAAAAGAGCTTGATGCTG+AGG | - | chr3.2:93070006-93070025 | MS.gene68740:CDS | 40.0% | |
GAAGAAAGAACGATGGAAAG+TGG | + | chr3.2:93072983-93073002 | None:intergenic | 40.0% | |
GACCAAAGTGAGTGAATTGT+TGG | - | chr3.2:93074540-93074559 | MS.gene68740:CDS | 40.0% | |
GATGAGATCATTCCTTCTTC+TGG | - | chr3.2:93073963-93073982 | MS.gene68740:CDS | 40.0% | |
GATGCCAATTGCAACAATTC+AGG | - | chr3.2:93073381-93073400 | MS.gene68740:intron | 40.0% | |
GATTGATCATAGGAAGAAGG+TGG | - | chr3.2:93073869-93073888 | MS.gene68740:intron | 40.0% | |
GCAGCCTAAAGATCAAGTTA+AGG | - | chr3.2:93074114-93074133 | MS.gene68740:CDS | 40.0% | |
GGAACCTGAATTGTTGCAAT+TGG | + | chr3.2:93073388-93073407 | None:intergenic | 40.0% | |
GGATGACGATGAGTGAAATT+GGG | - | chr3.2:93070625-93070644 | MS.gene68740:intron | 40.0% | |
GGCTAACTATGATCGTGAAA+TGG | - | chr3.2:93074681-93074700 | MS.gene68740:CDS | 40.0% | |
GGTACAAGAAGAAAGAACGA+TGG | + | chr3.2:93072990-93073009 | None:intergenic | 40.0% | |
GTCACAAGAATAGAGGACAT+AGG | + | chr3.2:93069886-93069905 | None:intergenic | 40.0% | |
TAATCAAACGAACTCTGGCT+CGG | + | chr3.2:93069231-93069250 | None:intergenic | 40.0% | |
TACAATCTCATTCCACCACA+AGG | - | chr3.2:93070984-93071003 | MS.gene68740:intron | 40.0% | |
TACCTGCAGCATAGTTAGTA+AGG | + | chr3.2:93069488-93069507 | None:intergenic | 40.0% | |
TATCAAGCGTGGAATTGAAG+CGG | - | chr3.2:93070240-93070259 | MS.gene68740:intron | 40.0% | |
TCACCATCAGGATATGGAAA+TGG | - | chr3.2:93074654-93074673 | MS.gene68740:intron | 40.0% | |
TCAGTATGAAGGCAATGTTG+AGG | - | chr3.2:93069646-93069665 | MS.gene68740:CDS | 40.0% | |
TCGAACAACGTAACGGTATT+TGG | + | chr3.2:93069281-93069300 | None:intergenic | 40.0% | |
TCTGAATCCCGTGTTTCAAT+TGG | - | chr3.2:93074346-93074365 | MS.gene68740:CDS | 40.0% | |
TCTGATGAAAATGGTGAAGG+TGG | - | chr3.2:93074226-93074245 | MS.gene68740:intron | 40.0% | |
TGATACCTCTTGTGTTCCTT+TGG | + | chr3.2:93070346-93070365 | None:intergenic | 40.0% | |
TGGAGGAGTCAATAAATGGA+CGG | - | chr3.2:93072900-93072919 | MS.gene68740:intron | 40.0% | |
TGTAATGACACAATGAGTGC+AGG | + | chr3.2:93073747-93073766 | None:intergenic | 40.0% | |
TTCCACAGAATAATCCTCTC+CGG | + | chr3.2:93069746-93069765 | None:intergenic | 40.0% | |
TTTGTCAATGGTCGTGATGA+TGG | - | chr3.2:93072834-93072853 | MS.gene68740:intron | 40.0% | |
! | ATTGGCTCAGAAAGAACAAG+AGG | - | chr3.2:93074741-93074760 | MS.gene68740:CDS | 40.0% |
! | GATTAGTCACCATCAGGATA+TGG | - | chr3.2:93074648-93074667 | MS.gene68740:intron | 40.0% |
! | GTTGATTCAGGCATTTGTGA+AGG | - | chr3.2:93069132-93069151 | MS.gene68740:CDS | 40.0% |
! | TGTTTGGAATGCCCAAAGAA+TGG | - | chr3.2:93072134-93072153 | MS.gene68740:intron | 40.0% |
! | TTCTTTGTTGTGGAGAGGAA+GGG | + | chr3.2:93074281-93074300 | None:intergenic | 40.0% |
! | TTGTGGTGGAATGAGATTGT+AGG | + | chr3.2:93070985-93071004 | None:intergenic | 40.0% |
! | TTTCTTTGTTGTGGAGAGGA+AGG | + | chr3.2:93074282-93074301 | None:intergenic | 40.0% |
! | TTTGTAAGGCATTCATCCTG+TGG | - | chr3.2:93070121-93070140 | MS.gene68740:intron | 40.0% |
!! | ATTTATTGACTCCTCCATGG+TGG | + | chr3.2:93072897-93072916 | None:intergenic | 40.0% |
!! | CTTCTCAGGCTTTTTGATTG+AGG | + | chr3.2:93070317-93070336 | None:intergenic | 40.0% |
!! | GAGTTGGCCTAGATCAATTT+TGG | - | chr3.2:93070919-93070938 | MS.gene68740:intron | 40.0% |
!! | GTTCACCGGAAGTACATTTT+TGG | - | chr3.2:93070028-93070047 | MS.gene68740:CDS | 40.0% |
!! | GTTTGGTTCCCTTTGTCTTT+TGG | + | chr3.2:93073242-93073261 | None:intergenic | 40.0% |
!! | TCACCGGAAGTACATTTTTG+GGG | - | chr3.2:93070030-93070049 | MS.gene68740:CDS | 40.0% |
!! | TCCATTTATTGACTCCTCCA+TGG | + | chr3.2:93072900-93072919 | None:intergenic | 40.0% |
!! | TTATTGCACTGGTCTCCTTT+TGG | - | chr3.2:93069589-93069608 | MS.gene68740:CDS | 40.0% |
!!! | AAGGTTTGCTGGTTTTGACA+AGG | - | chr3.2:93069982-93070001 | MS.gene68740:CDS | 40.0% |
AAACCACATCATGTTGCTGC+TGG | - | chr3.2:93073258-93073277 | MS.gene68740:intron | 45.0% | |
AACCGGAGAGGATTATTCTG+TGG | - | chr3.2:93069741-93069760 | MS.gene68740:CDS | 45.0% | |
AATGAGATTGTAGGCCAGCT+AGG | + | chr3.2:93070976-93070995 | None:intergenic | 45.0% | |
AATTGAAGCGGATGGAATCG+AGG | - | chr3.2:93070252-93070271 | MS.gene68740:intron | 45.0% | |
AGCAAGCTTGAGTGCATTGA+TGG | + | chr3.2:93073218-93073237 | None:intergenic | 45.0% | |
AGCAGCAACATGATGTGGTT+TGG | + | chr3.2:93073259-93073278 | None:intergenic | 45.0% | |
AGGGACAGTACCATAACATC+TGG | + | chr3.2:93074014-93074033 | None:intergenic | 45.0% | |
AGTTAGTAAGGCCTACATGG+AGG | + | chr3.2:93069476-93069495 | None:intergenic | 45.0% | |
ATTGTCTCTGCTACCATTGC+TGG | - | chr3.2:93069402-93069421 | MS.gene68740:CDS | 45.0% | |
CATGGAGTGTGTATGCTTTG+TGG | - | chr3.2:93074480-93074499 | MS.gene68740:CDS | 45.0% | |
CATGTGTAGTAAGTAGGTGC+AGG | - | chr3.2:93073648-93073667 | MS.gene68740:CDS | 45.0% | |
GACGATGAGTGAAATTGGGT+TGG | - | chr3.2:93070629-93070648 | MS.gene68740:intron | 45.0% | |
GCTTCGAGTACACCATTCTT+TGG | + | chr3.2:93072149-93072168 | None:intergenic | 45.0% | |
GCTTGCTCCCAAAAGACAAA+GGG | - | chr3.2:93073231-93073250 | MS.gene68740:intron | 45.0% | |
GGGACAGTACCATAACATCT+GGG | + | chr3.2:93074013-93074032 | None:intergenic | 45.0% | |
GTCATCCTCATCATCATCTC+CGG | + | chr3.2:93070612-93070631 | None:intergenic | 45.0% | |
GTCCCCCAAAAATGTACTTC+CGG | + | chr3.2:93070036-93070055 | None:intergenic | 45.0% | |
TACCTCTTGTGTTCCTTTGG+TGG | + | chr3.2:93070343-93070362 | None:intergenic | 45.0% | |
TATAGGGGCAAGCTGTGATT+TGG | - | chr3.2:93074432-93074451 | MS.gene68740:intron | 45.0% | |
TCAGAAATCACCTTGCCTTG+TGG | + | chr3.2:93071002-93071021 | None:intergenic | 45.0% | |
TGATAGAGAGAGAGAGAGAG+AGG | + | chr3.2:93073412-93073431 | None:intergenic | 45.0% | |
! | AATCGGGTTTGTTTGGCTTC+AGG | - | chr3.2:93069919-93069938 | MS.gene68740:intron | 45.0% |
! | AGCTTGCTCCCAAAAGACAA+AGG | - | chr3.2:93073230-93073249 | MS.gene68740:intron | 45.0% |
! | ATCGGGTTTGTTTGGCTTCA+GGG | - | chr3.2:93069920-93069939 | MS.gene68740:intron | 45.0% |
! | CTTTGAAGAACAGGAGGTTG+TGG | + | chr3.2:93073903-93073922 | None:intergenic | 45.0% |
! | GCTTGAGTGCATTGATGGTA+AGG | + | chr3.2:93073213-93073232 | None:intergenic | 45.0% |
! | GGAACACTTTGAAGAACAGG+AGG | + | chr3.2:93073909-93073928 | None:intergenic | 45.0% |
! | GGTGGAACACTTTGAAGAAC+AGG | + | chr3.2:93073912-93073931 | None:intergenic | 45.0% |
! | TCTTTGTTGTGGAGAGGAAG+GGG | + | chr3.2:93074280-93074299 | None:intergenic | 45.0% |
!! | AGTTAAGGATGGTGCTACTG+AGG | - | chr3.2:93074129-93074148 | MS.gene68740:CDS | 45.0% |
!! | CACCGGAAGTACATTTTTGG+GGG | - | chr3.2:93070031-93070050 | MS.gene68740:CDS | 45.0% |
!! | CTTTGACTTGATAGGTAGCG+TGG | + | chr3.2:93074857-93074876 | None:intergenic | 45.0% |
!! | TTCTTCAGGTTGTACCTGCT+CGG | + | chr3.2:93070527-93070546 | None:intergenic | 45.0% |
!!! | ATTTTATTGATAAAATAAAT+AGG | - | chr3.2:93071265-93071284 | MS.gene68740:intron | 5.0% |
!!! | TTTTATTGATAAAATAAATA+GGG | - | chr3.2:93071266-93071285 | MS.gene68740:intron | 5.0% |
AAGCGTGGAATTGAAGCGGA+TGG | - | chr3.2:93070244-93070263 | MS.gene68740:intron | 50.0% | |
ACCGTAGCGATGTTGTACTG+TGG | - | chr3.2:93071338-93071357 | MS.gene68740:intron | 50.0% | |
AGATTGTAGGCCAGCTAGGT+TGG | + | chr3.2:93070972-93070991 | None:intergenic | 50.0% | |
AGCCACCAAAGGAACACAAG+AGG | - | chr3.2:93070338-93070357 | MS.gene68740:intron | 50.0% | |
AGCTTGATGCTGAGGTTCAC+CGG | - | chr3.2:93070014-93070033 | MS.gene68740:CDS | 50.0% | |
AGGAGACCAGTGCAATAAGC+TGG | + | chr3.2:93069587-93069606 | None:intergenic | 50.0% | |
AGTAAGTAGGTGCAGGTGCA+TGG | - | chr3.2:93073655-93073674 | MS.gene68740:CDS | 50.0% | |
CAAGCTCTCAATTCTGCAGC+CGG | - | chr3.2:93070590-93070609 | MS.gene68740:intron | 50.0% | |
CACAGCGACAAAAGGTTTGC+TGG | - | chr3.2:93069971-93069990 | MS.gene68740:CDS | 50.0% | |
CCCACAGTACAACATCGCTA+CGG | + | chr3.2:93071342-93071361 | None:intergenic | 50.0% | |
CCGTAGCGATGTTGTACTGT+GGG | - | chr3.2:93071339-93071358 | MS.gene68740:intron | 50.0% | |
CCTTGCAACATGCATCTGCA+CGG | + | chr3.2:93072362-93072381 | None:intergenic | 50.0% | |
CTGCTCATCTTCGTGTAGCA+TGG | - | chr3.2:93074584-93074603 | MS.gene68740:intron | 50.0% | |
CTTGAGCAGCTCATGTCTTC+AGG | - | chr3.2:93074814-93074833 | MS.gene68740:intron | 50.0% | |
GAAATCACCTTGCCTTGTGG+TGG | + | chr3.2:93070999-93071018 | None:intergenic | 50.0% | |
GACCAACATCAAGGAGAGCA+CGG | + | chr3.2:93069792-93069811 | None:intergenic | 50.0% | |
GATTGAGGGATCTGCACGAA+TGG | + | chr3.2:93070302-93070321 | None:intergenic | 50.0% | |
GCACATGAGCTTCCTCACTT+TGG | - | chr3.2:93069450-93069469 | MS.gene68740:CDS | 50.0% | |
GCAGAAATTGGGCCAGAAGA+AGG | + | chr3.2:93073978-93073997 | None:intergenic | 50.0% | |
GGCCTTACTAACTATGCTGC+AGG | - | chr3.2:93069483-93069502 | MS.gene68740:CDS | 50.0% | |
GTACCAGCAGCAACATGATG+TGG | + | chr3.2:93073264-93073283 | None:intergenic | 50.0% | |
TAAGAACTCGGCGAGCCAAA+AGG | + | chr3.2:93069607-93069626 | None:intergenic | 50.0% | |
TAGAGAGAGAGAGAGAGAGG+AGG | + | chr3.2:93073409-93073428 | None:intergenic | 50.0% | |
TATTACTCAGGCAACCGGAG+AGG | - | chr3.2:93069729-93069748 | MS.gene68740:CDS | 50.0% | |
TCTCATTCCACCACAAGGCA+AGG | - | chr3.2:93070989-93071008 | MS.gene68740:intron | 50.0% | |
TTAAGACCACCACCGGAAAC+CGG | - | chr3.2:93069815-93069834 | MS.gene68740:CDS | 50.0% | |
TTCCGTGCTCTCCTTGATGT+TGG | - | chr3.2:93069787-93069806 | MS.gene68740:CDS | 50.0% | |
! | ACATCAAGGAGAGCACGGAA+TGG | + | chr3.2:93069787-93069806 | None:intergenic | 50.0% |
! | GCAAACCTTTTGTCGCTGTG+AGG | + | chr3.2:93069971-93069990 | None:intergenic | 50.0% |
! | TGTTTGGCTTCAGGGAGCTT+TGG | - | chr3.2:93069928-93069947 | MS.gene68740:intron | 50.0% |
!! | GGTCTTGTTAAGACCACCAC+CGG | - | chr3.2:93069808-93069827 | MS.gene68740:CDS | 50.0% |
!! | TATTGACTCCTCCATGGTGG+CGG | + | chr3.2:93072894-93072913 | None:intergenic | 50.0% |
AGTTATGAGACCCGCCACCA+TGG | - | chr3.2:93072880-93072899 | MS.gene68740:intron | 55.0% | |
ATGCATCTGCACGGTGACAC+GGG | + | chr3.2:93072353-93072372 | None:intergenic | 55.0% | |
CATGCATCTGCACGGTGACA+CGG | + | chr3.2:93072354-93072373 | None:intergenic | 55.0% | |
CCGTGCAGATGCATGTTGCA+AGG | - | chr3.2:93072359-93072378 | MS.gene68740:intron | 55.0% | |
CCTACATGGAGGCCAAAGTG+AGG | + | chr3.2:93069465-93069484 | None:intergenic | 55.0% | |
CCTCACTTTGGCCTCCATGT+AGG | - | chr3.2:93069462-93069481 | MS.gene68740:CDS | 55.0% | |
CCTCGTAGGTGAGCTTCTTC+AGG | + | chr3.2:93070541-93070560 | None:intergenic | 55.0% | |
CCTGAAGAAGCTCACCTACG+AGG | - | chr3.2:93070538-93070557 | MS.gene68740:intron | 55.0% | |
CCTTGAGTGCACCAAAGACC+CGG | + | chr3.2:93069837-93069856 | None:intergenic | 55.0% | |
GCGTTGTTTGTCTTCCGAGC+AGG | - | chr3.2:93070510-93070529 | MS.gene68740:intron | 55.0% | |
TAAGACCACCACCGGAAACC+GGG | - | chr3.2:93069816-93069835 | MS.gene68740:CDS | 55.0% | |
TGCACCAAAGACCCGGTTTC+CGG | + | chr3.2:93069830-93069849 | None:intergenic | 55.0% | |
TTCTAGACACTCACGTCGCG+TGG | + | chr3.2:93072751-93072770 | None:intergenic | 55.0% | |
! | ATTGACTCCTCCATGGTGGC+GGG | + | chr3.2:93072893-93072912 | None:intergenic | 55.0% |
! | TCCTTTGGTGGCTGCTTCTC+AGG | + | chr3.2:93070331-93070350 | None:intergenic | 55.0% |
! | TGCAGCCGGAGATGATGATG+AGG | - | chr3.2:93070604-93070623 | MS.gene68740:intron | 55.0% |
!! | TGGCTTCAGGGAGCTTTGGA+CGG | - | chr3.2:93069932-93069951 | MS.gene68740:intron | 55.0% |
AAAGACCCGGTTTCCGGTGG+TGG | + | chr3.2:93069824-93069843 | None:intergenic | 60.0% | |
AATGGCCTCCTGGAGTCAGC+TGG | + | chr3.2:93069769-93069788 | None:intergenic | 60.0% | |
ACCAAAGACCCGGTTTCCGG+TGG | + | chr3.2:93069827-93069846 | None:intergenic | 60.0% | |
ACCACCGGAAACCGGGTCTT+TGG | - | chr3.2:93069823-93069842 | MS.gene68740:intron | 60.0% | |
GCCTGAGAAGCAGCCACCAA+AGG | - | chr3.2:93070327-93070346 | MS.gene68740:intron | 60.0% | |
TATGAGACCCGCCACCATGG+AGG | - | chr3.2:93072883-93072902 | MS.gene68740:intron | 60.0% | |
! | CCGGGTCTTTGGTGCACTCA+AGG | - | chr3.2:93069834-93069853 | MS.gene68740:intron | 60.0% |
! | CTGTGGAACCAGCTGACTCC+AGG | - | chr3.2:93069758-93069777 | MS.gene68740:CDS | 60.0% |
! | TGGAACCAGCTGACTCCAGG+AGG | - | chr3.2:93069761-93069780 | MS.gene68740:CDS | 60.0% |
!! | CTTCAGGGAGCTTTGGACGG+GGG | - | chr3.2:93069935-93069954 | MS.gene68740:intron | 60.0% |
!! | GCTTCAGGGAGCTTTGGACG+GGG | - | chr3.2:93069934-93069953 | MS.gene68740:intron | 60.0% |
!! | GGCTTCAGGGAGCTTTGGAC+GGG | - | chr3.2:93069933-93069952 | MS.gene68740:intron | 60.0% |
CTGCACGGTGACACGGGAGA+AGG | + | chr3.2:93072347-93072366 | None:intergenic | 65.0% | |
! | GAGAGCACGGAATGGCCTCC+TGG | + | chr3.2:93069779-93069798 | None:intergenic | 65.0% |
!! | GGGAGCTTTGGACGGGGGTC+TGG | - | chr3.2:93069940-93069959 | MS.gene68740:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 93069064 | 93074894 | 93069064 | ID=MS.gene68740 |
chr3.2 | mRNA | 93069064 | 93074894 | 93069064 | ID=MS.gene68740.t1;Parent=MS.gene68740 |
chr3.2 | exon | 93074892 | 93074894 | 93074892 | ID=MS.gene68740.t1.exon1;Parent=MS.gene68740.t1 |
chr3.2 | CDS | 93074892 | 93074894 | 93074892 | ID=cds.MS.gene68740.t1;Parent=MS.gene68740.t1 |
chr3.2 | exon | 93074655 | 93074816 | 93074655 | ID=MS.gene68740.t1.exon2;Parent=MS.gene68740.t1 |
chr3.2 | CDS | 93074655 | 93074816 | 93074655 | ID=cds.MS.gene68740.t1;Parent=MS.gene68740.t1 |
chr3.2 | exon | 93074454 | 93074580 | 93074454 | ID=MS.gene68740.t1.exon3;Parent=MS.gene68740.t1 |
chr3.2 | CDS | 93074454 | 93074580 | 93074454 | ID=cds.MS.gene68740.t1;Parent=MS.gene68740.t1 |
chr3.2 | exon | 93074291 | 93074370 | 93074291 | ID=MS.gene68740.t1.exon4;Parent=MS.gene68740.t1 |
chr3.2 | CDS | 93074291 | 93074370 | 93074291 | ID=cds.MS.gene68740.t1;Parent=MS.gene68740.t1 |
chr3.2 | exon | 93074103 | 93074219 | 93074103 | ID=MS.gene68740.t1.exon5;Parent=MS.gene68740.t1 |
chr3.2 | CDS | 93074103 | 93074219 | 93074103 | ID=cds.MS.gene68740.t1;Parent=MS.gene68740.t1 |
chr3.2 | exon | 93073883 | 93074017 | 93073883 | ID=MS.gene68740.t1.exon6;Parent=MS.gene68740.t1 |
chr3.2 | CDS | 93073883 | 93074017 | 93073883 | ID=cds.MS.gene68740.t1;Parent=MS.gene68740.t1 |
chr3.2 | exon | 93073599 | 93073768 | 93073599 | ID=MS.gene68740.t1.exon7;Parent=MS.gene68740.t1 |
chr3.2 | CDS | 93073599 | 93073768 | 93073599 | ID=cds.MS.gene68740.t1;Parent=MS.gene68740.t1 |
chr3.2 | exon | 93072948 | 93073027 | 93072948 | ID=MS.gene68740.t1.exon8;Parent=MS.gene68740.t1 |
chr3.2 | CDS | 93072948 | 93073027 | 93072948 | ID=cds.MS.gene68740.t1;Parent=MS.gene68740.t1 |
chr3.2 | exon | 93069936 | 93070108 | 93069936 | ID=MS.gene68740.t1.exon9;Parent=MS.gene68740.t1 |
chr3.2 | CDS | 93069936 | 93070108 | 93069936 | ID=cds.MS.gene68740.t1;Parent=MS.gene68740.t1 |
chr3.2 | exon | 93069064 | 93069840 | 93069064 | ID=MS.gene68740.t1.exon10;Parent=MS.gene68740.t1 |
chr3.2 | CDS | 93069064 | 93069840 | 93069064 | ID=cds.MS.gene68740.t1;Parent=MS.gene68740.t1 |
Gene Sequence |
Protein sequence |