AlfalfaGEDB | MS.gene051984

M. sativa cultivar XinJiangDaYe / MS.gene051984

KEGG: -
GO: GO:0003674 GO:0003676 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00076.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051984.t1	XP_003601657.1	91.8	122	8	1	1	122	1	120	1.40E-54	222.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051984.t1	Q9LIS2	59.7	119	44	3	1	118	1	116	1.1e-31	137.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051984.t1	G7JA80	91.8	122	8	1	1	122	1	120	1.0e-54	222.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049361	MS.gene051984	0.863691	2.08E-64	-1.69E-46
MS.gene050134	MS.gene051984	0.867544	1.27E-65	-1.69E-46
MS.gene050791	MS.gene051984	0.898071	7.60E-77	-1.69E-46
MS.gene050912	MS.gene051984	0.818219	2.20E-52	-1.69E-46
MS.gene051984	MS.gene052664	0.816894	4.37E-52	-1.69E-46
MS.gene051984	MS.gene053224	0.861655	8.81E-64	-1.69E-46
MS.gene051984	MS.gene055232	0.871991	4.48E-67	-1.69E-46
MS.gene051984	MS.gene057272	0.843392	1.44E-58	-1.69E-46
MS.gene051984	MS.gene057641	0.82012	8.11E-53	-1.69E-46
MS.gene051984	MS.gene057643	0.831606	1.52E-55	-1.69E-46
MS.gene051984	MS.gene060483	0.875233	3.62E-68	-1.69E-46
MS.gene051984	MS.gene06169	0.836351	9.84E-57	-1.69E-46
MS.gene051984	MS.gene063093	0.801747	7.78E-49	-1.69E-46
MS.gene051984	MS.gene06581	0.824354	8.45E-54	-1.69E-46
MS.gene051984	MS.gene06583	0.812575	3.96E-51	-1.69E-46
MS.gene051984	MS.gene065917	0.829182	5.94E-55	-1.69E-46
MS.gene051984	MS.gene066811	0.817152	3.82E-52	-1.69E-46
MS.gene051984	MS.gene067331	0.876834	1.02E-68	-1.69E-46
MS.gene051984	MS.gene067809	0.815691	8.12E-52	-1.69E-46
MS.gene051984	MS.gene06803	0.864477	1.18E-64	-1.69E-46
MS.gene051984	MS.gene070946	0.841154	5.64E-58	-1.69E-46
MS.gene051984	MS.gene072093	0.808173	3.53E-50	-1.69E-46
MS.gene051984	MS.gene072503	0.821774	3.38E-53	-1.69E-46
MS.gene051984	MS.gene072589	0.897457	1.38E-76	-1.69E-46
MS.gene051984	MS.gene072591	0.899077	2.83E-77	-1.69E-46
MS.gene051984	MS.gene072977	0.818075	2.37E-52	-1.69E-46
MS.gene051984	MS.gene074400	0.828024	1.13E-54	-1.69E-46
MS.gene051984	MS.gene08521	0.8884	6.11E-73	-1.69E-46
MS.gene051984	MS.gene08869	0.838127	3.46E-57	-1.69E-46
MS.gene051984	MS.gene08870	0.866264	3.24E-65	-1.69E-46
MS.gene051984	MS.gene08871	0.862105	6.41E-64	-1.69E-46
MS.gene051984	MS.gene09761	0.843587	1.28E-58	-1.69E-46
MS.gene051984	MS.gene09762	0.807578	4.72E-50	-1.69E-46
MS.gene051984	MS.gene09779	0.83488	2.32E-56	-1.69E-46
MS.gene051984	MS.gene09780	0.834229	3.38E-56	-1.69E-46
MS.gene051984	MS.gene20153	0.832503	9.11E-56	-1.69E-46
MS.gene051984	MS.gene22784	0.883881	3.08E-71	-1.69E-46
MS.gene051984	MS.gene23031	0.81768	2.91E-52	-1.69E-46
MS.gene051984	MS.gene23303	0.807652	4.55E-50	-1.69E-46
MS.gene051984	MS.gene24639	0.813322	2.71E-51	-1.69E-46
MS.gene051984	MS.gene25236	0.833626	4.79E-56	-1.69E-46
MS.gene051984	MS.gene25639	0.835155	1.98E-56	-1.69E-46
MS.gene051984	MS.gene25903	0.859478	4.02E-63	-1.69E-46
MS.gene051984	MS.gene26343	0.800875	1.17E-48	-1.69E-46
MS.gene051984	MS.gene26707	0.842962	1.88E-58	-1.69E-46
MS.gene051984	MS.gene27265	0.811428	7.04E-51	-1.69E-46
MS.gene051984	MS.gene28147	0.833172	6.21E-56	-1.69E-46
MS.gene051984	MS.gene31039	0.810096	1.37E-50	-1.69E-46
MS.gene051984	MS.gene31991	0.812259	4.64E-51	-1.69E-46
MS.gene051984	MS.gene32591	0.842124	3.13E-58	-1.69E-46
MS.gene051984	MS.gene34372	0.85337	2.50E-61	-1.69E-46
MS.gene051984	MS.gene38035	0.81664	4.98E-52	-1.69E-46
MS.gene051984	MS.gene38222	0.804504	2.09E-49	-1.69E-46
MS.gene051984	MS.gene41726	0.816465	5.45E-52	-1.69E-46
MS.gene051984	MS.gene43071	0.805863	1.09E-49	-1.69E-46
MS.gene051984	MS.gene43711	0.821046	4.97E-53	-1.69E-46
MS.gene051984	MS.gene46387	0.847278	1.28E-59	-1.69E-46
MS.gene051984	MS.gene46903	0.826467	2.67E-54	-1.69E-46
MS.gene051984	MS.gene46907	0.846788	1.74E-59	-1.69E-46
MS.gene051984	MS.gene50640	0.852136	5.63E-61	-1.69E-46
MS.gene051984	MS.gene50756	0.831932	1.26E-55	-1.69E-46
MS.gene051984	MS.gene50758	0.839982	1.14E-57	-1.69E-46
MS.gene051984	MS.gene51868	0.812262	4.63E-51	-1.69E-46
MS.gene051984	MS.gene52415	0.815267	1.01E-51	-1.69E-46
MS.gene051984	MS.gene52738	0.834867	2.34E-56	-1.69E-46
MS.gene051984	MS.gene55890	0.882861	7.30E-71	-1.69E-46
MS.gene051984	MS.gene59228	0.874141	8.51E-68	-1.69E-46
MS.gene051984	MS.gene59230	0.852318	4.99E-61	-1.69E-46
MS.gene051984	MS.gene59609	0.862277	5.68E-64	-1.69E-46
MS.gene051984	MS.gene60693	0.807062	6.07E-50	-1.69E-46
MS.gene051984	MS.gene62791	0.828581	8.30E-55	-1.69E-46
MS.gene051984	MS.gene68740	0.813715	2.22E-51	-1.69E-46
MS.gene051984	MS.gene70316	0.825348	4.92E-54	-1.69E-46
MS.gene051984	MS.gene70579	0.851992	6.18E-61	-1.69E-46
MS.gene051984	MS.gene72382	0.866779	2.22E-65	-1.69E-46
MS.gene051984	MS.gene73000	0.843954	1.02E-58	-1.69E-46
MS.gene051984	MS.gene79721	0.896538	3.35E-76	-1.69E-46
MS.gene051984	MS.gene80994	0.800249	1.57E-48	-1.69E-46
MS.gene051984	MS.gene81099	0.802759	4.82E-49	-1.69E-46
MS.gene051984	MS.gene82009	0.82794	1.19E-54	-1.69E-46
MS.gene051984	MS.gene82038	0.803324	3.68E-49	-1.69E-46
MS.gene051984	MS.gene82545	0.805604	1.23E-49	-1.69E-46
MS.gene051984	MS.gene88918	0.840455	8.60E-58	-1.69E-46
MS.gene051984	MS.gene92142	0.841002	6.19E-58	-1.69E-46
MS.gene051984	MS.gene95672	0.826917	2.08E-54	-1.69E-46
MS.gene051984	MS.gene95803	0.814028	1.90E-51	-1.69E-46
MS.gene051984	MS.gene96225	0.887963	8.99E-73	-1.69E-46
MS.gene051984	MS.gene98171	0.874396	6.98E-68	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene88428	MS.gene051984	PPI
MS.gene016534	MS.gene051984	PPI
MS.gene87189	MS.gene051984	PPI
MS.gene063816	MS.gene051984	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051984.t1	MTR_3g084040	91.935	124	8	1	1	124	1	122	2.61e-74	218
MS.gene051984.t1	MTR_3g084040	90.099	101	8	1	1	101	1	99	2.15e-62	186
MS.gene051984.t1	MTR_4g109540	52.893	121	52	3	1	116	1	121	3.14e-36	125
MS.gene051984.t1	MTR_7g013740	47.899	119	59	2	1	116	1	119	9.60e-35	117
MS.gene051984.t1	MTR_7g013730	48.031	127	59	3	1	124	1	123	1.30e-34	120
MS.gene051984.t1	MTR_4g109540	49.612	129	52	4	1	116	1	129	1.78e-33	118
MS.gene051984.t1	MTR_3g025880	43.511	131	63	3	1	124	1	127	2.92e-30	112
MS.gene051984.t1	MTR_3g014000	40.714	140	61	5	1	132	1	126	2.78e-26	96.3
MS.gene051984.t1	MTR_3g080130	50.588	85	41	1	38	121	36	120	3.71e-26	95.5
MS.gene051984.t1	MTR_7g105260	46.535	101	50	2	25	121	19	119	1.52e-24	91.7
MS.gene051984.t1	MTR_4g070080	51.316	76	36	1	39	113	7	82	7.00e-24	89.7
MS.gene051984.t1	MTR_4g070080	51.316	76	36	1	39	113	7	82	1.66e-23	89.7
MS.gene051984.t1	MTR_4g063560	43.820	89	49	1	28	115	23	111	2.03e-22	85.5
MS.gene051984.t1	MTR_4g070190	48.684	76	38	1	39	113	9	84	2.67e-22	86.7
MS.gene051984.t1	MTR_4g070140	50.000	76	37	1	39	113	9	84	1.05e-21	85.9
MS.gene051984.t1	MTR_3g075500	44.318	88	44	2	39	125	207	290	2.21e-19	81.6
MS.gene051984.t1	MTR_3g075500	39.362	94	53	2	31	123	102	192	2.11e-11	59.7
MS.gene051984.t1	MTR_7g099940	41.322	121	61	4	1	117	1	115	6.56e-19	77.4
MS.gene051984.t1	MTR_1g064230	49.367	79	39	1	39	116	197	275	9.01e-19	79.7
MS.gene051984.t1	MTR_4g081520	43.137	102	51	3	33	131	44	141	2.20e-18	75.9
MS.gene051984.t1	MTR_1g092860	36.792	106	63	2	24	128	178	280	1.55e-17	76.6
MS.gene051984.t1	MTR_4g104470	44.304	79	43	1	39	116	217	295	6.57e-17	75.1
MS.gene051984.t1	MTR_4g104470	43.529	85	45	2	39	122	123	205	2.48e-12	62.4
MS.gene051984.t1	MTR_1g045510	45.679	81	43	1	39	118	205	285	1.66e-16	73.9
MS.gene051984.t1	MTR_1g045510	35.294	85	54	1	38	121	113	197	4.68e-12	61.6
MS.gene051984.t1	MTR_3g055990	45.570	79	42	1	39	117	7	84	3.61e-16	73.9
MS.gene051984.t1	MTR_3g055990	45.570	79	42	1	39	117	7	84	3.62e-16	73.9
MS.gene051984.t1	MTR_6g004810	33.945	109	63	2	33	132	128	236	1.60e-15	72.0
MS.gene051984.t1	MTR_3g065190	42.697	89	49	2	38	124	112	200	6.51e-15	70.1
MS.gene051984.t1	MTR_1g097280	34.043	94	61	1	40	132	31	124	1.18e-14	69.7
MS.gene051984.t1	MTR_3g116130	35.714	84	54	0	38	121	29	112	1.37e-14	68.6
MS.gene051984.t1	MTR_3g116130	35.714	84	54	0	38	121	29	112	2.04e-14	68.6
MS.gene051984.t1	MTR_1g073690	36.471	85	54	0	34	118	108	192	2.29e-14	68.6
MS.gene051984.t1	MTR_1g073690	36.709	79	49	1	39	117	7	84	1.25e-11	60.8
MS.gene051984.t1	MTR_7g117495	37.662	77	48	0	38	114	18	94	3.37e-14	67.0
MS.gene051984.t1	MTR_7g117495	37.662	77	48	0	38	114	18	94	3.55e-14	67.0
MS.gene051984.t1	MTR_3g029580	35.556	90	54	3	24	110	17	105	3.61e-14	64.7
MS.gene051984.t1	MTR_6g477870	35.000	80	51	1	38	116	95	174	4.06e-14	65.9
MS.gene051984.t1	MTR_4g124940	45.333	75	40	1	40	113	133	207	4.54e-14	67.8
MS.gene051984.t1	MTR_4g035310	35.484	93	56	1	38	126	16	108	4.59e-14	67.0
MS.gene051984.t1	MTR_4g035310	35.484	93	56	1	38	126	16	108	4.62e-14	67.0
MS.gene051984.t1	MTR_5g097580	41.250	80	46	1	37	116	5	83	4.79e-14	67.8
MS.gene051984.t1	MTR_5g097580	41.250	80	46	1	37	116	5	83	5.00e-14	67.8
MS.gene051984.t1	MTR_8g022050	45.122	82	43	2	40	120	149	229	5.73e-14	67.4
MS.gene051984.t1	MTR_4g074930	38.542	96	58	1	32	127	358	452	6.40e-14	67.4
MS.gene051984.t1	MTR_4g074930	38.542	96	58	1	32	127	323	417	6.66e-14	67.4
MS.gene051984.t1	MTR_4g074930	38.542	96	58	1	32	127	370	464	6.67e-14	67.4
MS.gene051984.t1	MTR_4g074930	38.542	96	58	1	32	127	335	429	6.88e-14	67.4
MS.gene051984.t1	MTR_7g106440	40.230	87	51	1	36	121	210	296	7.74e-14	66.6
MS.gene051984.t1	MTR_8g024520	42.029	69	40	0	38	106	25	93	8.76e-14	66.2
MS.gene051984.t1	MTR_8g024520	42.029	69	40	0	38	106	25	93	8.90e-14	66.2
MS.gene051984.t1	MTR_4g081510	32.479	117	73	3	2	116	11	123	2.56e-13	63.9
MS.gene051984.t1	MTR_5g071540	33.673	98	56	2	23	111	16	113	3.00e-13	62.8
MS.gene051984.t1	MTR_1g036430	41.176	85	49	1	37	121	161	244	3.35e-13	65.5
MS.gene051984.t1	MTR_2g026180	40.244	82	48	1	35	116	1	81	3.40e-13	65.5
MS.gene051984.t1	MTR_2g026180	27.869	122	79	2	9	130	85	197	1.89e-11	60.5
MS.gene051984.t1	MTR_3g092490	40.260	77	44	1	38	112	26	102	3.44e-13	63.2
MS.gene051984.t1	MTR_3g103420	34.118	85	56	0	33	117	112	196	5.03e-13	64.7
MS.gene051984.t1	MTR_3g103420	38.636	88	53	1	29	116	1	87	9.21e-12	61.2
MS.gene051984.t1	MTR_1g019150	37.000	100	59	2	19	114	10	109	5.36e-13	64.7
MS.gene051984.t1	MTR_2g096560	36.250	80	50	1	38	116	7	86	5.74e-13	60.5
MS.gene051984.t1	MTR_3g092490	40.260	77	44	1	38	112	26	102	6.16e-13	63.9
MS.gene051984.t1	MTR_3g092490	40.260	77	44	1	38	112	26	102	6.29e-13	63.5
MS.gene051984.t1	MTR_7g107580	38.824	85	51	1	38	121	349	433	8.92e-13	64.3
MS.gene051984.t1	MTR_5g064120	35.065	77	50	0	38	114	16	92	8.93e-13	63.5
MS.gene051984.t1	MTR_7g107580	38.824	85	51	1	38	121	348	432	9.45e-13	63.9
MS.gene051984.t1	MTR_4g117350	37.500	80	49	1	36	114	69	148	1.67e-12	61.2
MS.gene051984.t1	MTR_3g109090	42.683	82	45	2	40	120	131	211	2.14e-12	63.2
MS.gene051984.t1	MTR_5g044970	36.250	80	50	1	35	113	7	86	2.16e-12	61.2
MS.gene051984.t1	MTR_3g109090	42.683	82	45	2	40	120	147	227	2.36e-12	62.8
MS.gene051984.t1	MTR_8g463890	43.056	72	41	0	35	106	70	141	2.46e-12	62.8
MS.gene051984.t1	MTR_3g075500	40.625	64	37	1	39	101	207	270	2.48e-12	62.4
MS.gene051984.t1	MTR_3g075500	39.362	94	53	2	31	123	102	192	1.58e-11	60.1
MS.gene051984.t1	MTR_3g029580	34.146	82	50	3	23	101	16	96	4.86e-12	59.3
MS.gene051984.t1	MTR_1g020080	35.870	92	57	2	40	129	192	283	8.58e-12	61.2
MS.gene051984.t1	MTR_1g056520	37.349	83	51	1	36	117	205	287	1.22e-11	60.5
MS.gene051984.t1	MTR_1g020080	36.364	88	54	2	40	125	192	279	1.25e-11	60.8
MS.gene051984.t1	MTR_4g036415	39.024	82	49	1	33	113	446	527	1.98e-11	60.5
MS.gene051984.t1	MTR_2g026180	27.869	122	79	2	9	130	15	127	2.19e-11	60.1
MS.gene051984.t1	MTR_4g088010	30.769	91	61	1	35	125	160	248	3.42e-11	59.7
MS.gene051984.t1	MTR_4g088010	39.189	74	45	0	33	106	71	144	7.31e-11	58.5
MS.gene051984.t1	MTR_4g085540	37.975	79	48	1	37	114	33	111	5.06e-11	59.3
MS.gene051984.t1	MTR_2g097960	39.759	83	48	2	40	120	110	192	5.20e-11	58.9
MS.gene051984.t1	MTR_5g017280	36.145	83	52	1	35	117	1	82	7.92e-11	58.5
MS.gene051984.t1	MTR_5g017280	36.145	83	52	1	35	117	1	82	9.19e-11	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051984.t1	AT3G23830	59.350	123	45	4	1	122	1	119	3.59e-44	141
MS.gene051984.t1	AT3G23830	59.350	123	45	4	1	122	1	119	3.59e-44	141
MS.gene051984.t1	AT4G13850	62.393	117	40	3	1	116	1	114	4.87e-43	138
MS.gene051984.t1	AT4G13850	60.976	123	43	4	1	122	1	119	5.36e-43	139
MS.gene051984.t1	AT4G13850	60.976	123	43	4	1	122	1	119	7.03e-43	139
MS.gene051984.t1	AT4G13850	60.976	123	43	4	1	122	1	119	8.16e-43	139
MS.gene051984.t1	AT5G61030	55.462	119	50	2	1	116	1	119	7.31e-40	135
MS.gene051984.t1	AT5G61030	55.462	119	50	2	1	116	1	119	7.31e-40	135
MS.gene051984.t1	AT1G74230	53.043	115	50	1	1	115	1	111	4.71e-37	127
MS.gene051984.t1	AT5G47320	55.172	116	44	3	1	115	1	109	1.11e-33	117
MS.gene051984.t1	AT3G08000	58.333	84	34	1	39	121	42	125	1.37e-27	99.8
MS.gene051984.t1	AT5G06210	50.000	96	45	2	33	127	29	122	1.72e-23	89.4
MS.gene051984.t1	AT2G21660	48.684	76	38	1	39	113	9	84	2.26e-21	84.3
MS.gene051984.t1	AT5G59865	47.191	89	46	1	36	123	24	112	3.09e-21	82.4
MS.gene051984.t1	AT2G21660	48.684	76	38	1	39	113	9	84	3.36e-21	84.3
MS.gene051984.t1	AT2G37220	53.165	79	36	1	39	116	205	283	5.27e-21	85.9
MS.gene051984.t1	AT2G37220	41.860	86	43	2	39	123	92	171	3.57e-12	62.0
MS.gene051984.t1	AT3G53460	50.602	83	40	1	39	120	258	340	1.67e-20	85.5
MS.gene051984.t1	AT3G53460	43.023	86	42	2	39	123	100	179	5.74e-11	58.9
MS.gene051984.t1	AT3G53460	50.602	83	40	1	39	120	258	340	1.67e-20	85.5
MS.gene051984.t1	AT3G53460	43.023	86	42	2	39	123	100	179	5.74e-11	58.9
MS.gene051984.t1	AT3G53460	50.602	83	40	1	39	120	258	340	1.67e-20	85.5
MS.gene051984.t1	AT3G53460	43.023	86	42	2	39	123	100	179	5.74e-11	58.9
MS.gene051984.t1	AT4G39260	40.000	95	47	2	39	132	7	92	1.86e-20	80.1
MS.gene051984.t1	AT3G53460	50.602	83	40	1	39	120	279	361	1.94e-20	85.5
MS.gene051984.t1	AT1G18630	40.000	115	63	3	1	114	4	113	1.66e-19	79.3
MS.gene051984.t1	AT4G24770	47.126	87	42	2	39	124	245	328	9.70e-19	80.5
MS.gene051984.t1	AT4G24770	39.000	100	57	2	25	123	137	233	3.39e-12	62.4
MS.gene051984.t1	AT4G24770	47.126	87	42	2	39	124	245	328	9.70e-19	80.5
MS.gene051984.t1	AT4G24770	39.000	100	57	2	25	123	137	233	3.39e-12	62.4
MS.gene051984.t1	AT3G26420	45.882	85	45	1	39	122	8	92	1.13e-18	79.0
MS.gene051984.t1	AT5G50250	44.304	79	43	1	39	116	208	286	6.46e-18	77.8
MS.gene051984.t1	AT5G50250	43.678	87	45	2	38	123	113	196	9.63e-13	63.5
MS.gene051984.t1	AT2G37510	48.052	77	39	1	35	110	31	107	7.04e-18	74.7
MS.gene051984.t1	AT4G39260	40.789	76	44	1	39	113	7	82	2.07e-17	73.2
MS.gene051984.t1	AT4G39260	40.789	76	44	1	39	113	7	82	5.50e-17	73.2
MS.gene051984.t1	AT1G60000	48.193	83	42	1	36	117	175	257	6.33e-17	74.7
MS.gene051984.t1	AT4G13860	46.667	75	39	1	37	110	2	76	7.72e-17	70.5
MS.gene051984.t1	AT3G46020	42.500	80	45	1	37	115	6	85	2.24e-16	69.7
MS.gene051984.t1	AT5G54580	42.683	82	46	1	37	117	55	136	5.19e-16	70.1
MS.gene051984.t1	AT3G20930	36.842	95	59	1	35	128	279	373	9.81e-16	72.4
MS.gene051984.t1	AT1G76460	38.462	91	53	1	38	128	24	111	1.26e-15	71.6
MS.gene051984.t1	AT5G55550	43.038	79	44	1	39	117	7	84	2.89e-15	71.2
MS.gene051984.t1	AT5G55550	43.038	79	44	1	39	117	7	84	2.89e-15	71.2
MS.gene051984.t1	AT5G55550	43.038	79	44	1	39	117	7	84	2.89e-15	71.2
MS.gene051984.t1	AT5G55550	43.038	79	44	1	39	117	7	84	2.89e-15	71.2
MS.gene051984.t1	AT5G55550	43.038	79	44	1	39	117	7	84	2.89e-15	71.2
MS.gene051984.t1	AT5G55550	43.038	79	44	1	39	117	7	84	3.10e-15	71.2
MS.gene051984.t1	AT5G55550	43.038	79	44	1	39	117	7	84	3.10e-15	71.2
MS.gene051984.t1	AT5G55550	43.038	79	44	1	39	117	7	84	3.10e-15	71.2
MS.gene051984.t1	AT5G55550	43.038	79	44	1	39	117	7	84	3.10e-15	71.2
MS.gene051984.t1	AT3G52380	41.573	89	51	1	36	123	217	305	3.22e-15	70.9
MS.gene051984.t1	AT5G55550	45.714	70	37	1	39	108	7	75	7.81e-15	70.1
MS.gene051984.t1	AT5G55550	45.714	70	37	1	39	108	7	75	8.16e-15	70.1
MS.gene051984.t1	AT1G60650	38.000	100	57	2	37	131	11	110	8.54e-15	69.3
MS.gene051984.t1	AT1G60650	38.000	100	57	2	37	131	11	110	8.54e-15	69.3
MS.gene051984.t1	AT2G22100	37.778	90	56	0	33	122	158	247	1.22e-14	69.3
MS.gene051984.t1	AT1G54080	43.038	79	44	1	36	113	146	224	1.74e-14	68.9
MS.gene051984.t1	AT1G22910	38.961	77	47	0	38	114	13	89	1.86e-14	67.8
MS.gene051984.t1	AT1G22910	38.961	77	47	0	38	114	13	89	1.90e-14	67.8
MS.gene051984.t1	AT2G46780	37.234	94	54	1	38	126	22	115	1.99e-14	68.6
MS.gene051984.t1	AT2G46780	37.234	94	54	1	38	126	22	115	1.99e-14	68.6
MS.gene051984.t1	AT1G33470	42.029	69	40	0	38	106	7	75	2.03e-14	67.8
MS.gene051984.t1	AT1G33470	39.474	76	46	0	38	113	7	82	2.14e-14	67.8
MS.gene051984.t1	AT3G07810	41.026	78	45	1	39	116	7	83	2.18e-14	68.9
MS.gene051984.t1	AT3G07810	41.026	78	45	1	39	116	7	83	2.22e-14	68.9
MS.gene051984.t1	AT1G33470	39.474	76	46	0	38	113	7	82	2.29e-14	67.4
MS.gene051984.t1	AT3G14100	44.000	75	41	1	40	113	146	220	2.58e-14	68.6
MS.gene051984.t1	AT2G18510	41.573	89	50	2	38	124	112	200	2.88e-14	68.2
MS.gene051984.t1	AT5G04280	39.744	78	46	1	38	114	7	84	2.88e-14	68.2
MS.gene051984.t1	AT1G48920	39.000	100	56	1	37	131	296	395	3.19e-14	68.6
MS.gene051984.t1	AT4G26650	42.308	78	44	1	39	116	16	92	3.40e-14	68.2
MS.gene051984.t1	AT4G26650	31.034	87	60	0	37	123	121	207	2.72e-11	60.1
MS.gene051984.t1	AT4G26650	42.308	78	44	1	39	116	13	89	3.56e-14	68.2
MS.gene051984.t1	AT4G26650	31.034	87	60	0	37	123	118	204	2.88e-11	60.1
MS.gene051984.t1	AT1G20880	38.961	77	47	0	38	114	24	100	3.95e-14	67.4
MS.gene051984.t1	AT1G20880	38.961	77	47	0	38	114	24	100	3.95e-14	67.4
MS.gene051984.t1	AT1G20880	38.961	77	47	0	38	114	24	100	3.95e-14	67.4
MS.gene051984.t1	AT1G22910	38.961	77	47	0	38	114	13	89	5.03e-14	67.4
MS.gene051984.t1	AT1G22330	36.559	93	56	1	38	130	17	106	5.72e-14	67.0
MS.gene051984.t1	AT4G13860	53.448	58	26	1	54	110	2	59	6.62e-14	62.4
MS.gene051984.t1	AT5G47620	39.759	83	49	1	34	116	2	83	7.18e-14	67.4
MS.gene051984.t1	AT5G47620	33.333	78	52	0	36	113	104	181	3.02e-11	59.7
MS.gene051984.t1	AT5G47620	39.759	83	49	1	34	116	2	83	7.18e-14	67.4
MS.gene051984.t1	AT5G47620	33.333	78	52	0	36	113	104	181	3.02e-11	59.7
MS.gene051984.t1	AT5G47620	39.759	83	49	1	34	116	2	83	7.18e-14	67.4
MS.gene051984.t1	AT5G47620	33.333	78	52	0	36	113	104	181	3.02e-11	59.7
MS.gene051984.t1	AT1G78260	36.364	77	49	0	38	114	17	93	9.20e-14	66.2
MS.gene051984.t1	AT5G47620	53.704	54	25	0	34	87	2	55	1.33e-13	66.6
MS.gene051984.t1	AT5G47620	33.333	78	52	0	36	113	126	203	3.18e-11	59.7
MS.gene051984.t1	AT4G39260	38.983	59	36	0	39	97	7	65	1.49e-13	62.8
MS.gene051984.t1	AT1G78260	36.364	77	49	0	38	114	17	93	1.52e-13	65.9
MS.gene051984.t1	AT3G13224	36.667	90	56	1	30	118	92	181	2.41e-13	65.5
MS.gene051984.t1	AT3G13224	36.667	90	56	1	30	118	101	190	2.86e-13	65.5
MS.gene051984.t1	AT3G54770	36.364	77	49	0	38	114	17	93	3.14e-13	64.7
MS.gene051984.t1	AT2G27330	31.579	95	64	1	37	130	20	114	3.29e-13	62.0
MS.gene051984.t1	AT3G13224	45.588	68	37	0	30	97	101	168	3.32e-13	64.3
MS.gene051984.t1	AT3G54770	36.364	77	49	0	38	114	17	93	3.44e-13	64.7
MS.gene051984.t1	AT1G17640	34.694	98	61	2	36	131	155	251	4.14e-13	65.1
MS.gene051984.t1	AT1G17640	34.694	98	61	2	36	131	155	251	4.14e-13	65.1
MS.gene051984.t1	AT1G17640	34.694	98	61	2	36	131	155	251	4.14e-13	65.1
MS.gene051984.t1	AT2G21690	39.437	71	42	1	41	110	10	80	5.69e-13	61.2
MS.gene051984.t1	AT1G17370	44.000	75	41	1	40	113	141	215	9.39e-13	63.9
MS.gene051984.t1	AT1G71800	35.443	79	49	2	40	116	11	89	1.03e-12	63.9
MS.gene051984.t1	AT1G17370	44.000	75	41	1	40	113	141	215	1.03e-12	63.9
MS.gene051984.t1	AT4G14300	40.506	79	46	1	39	117	7	84	1.21e-12	63.9
MS.gene051984.t1	AT4G14300	34.146	82	54	0	37	118	109	190	4.42e-12	62.0
MS.gene051984.t1	AT4G14300	40.506	79	46	1	39	117	7	84	1.21e-12	63.9
MS.gene051984.t1	AT4G14300	34.146	82	54	0	37	118	109	190	4.42e-12	62.0
MS.gene051984.t1	AT1G49760	43.590	78	43	1	37	113	44	121	1.32e-12	63.9
MS.gene051984.t1	AT1G49760	43.590	78	43	1	37	113	44	121	1.32e-12	63.9
MS.gene051984.t1	AT1G01080	37.975	79	49	0	32	110	206	284	1.39e-12	63.2
MS.gene051984.t1	AT2G33410	31.579	114	72	1	11	118	77	190	1.41e-12	63.5
MS.gene051984.t1	AT2G33410	37.349	83	51	1	39	121	7	88	2.02e-12	63.2
MS.gene051984.t1	AT1G01080	37.975	79	49	0	32	110	207	285	1.54e-12	63.2
MS.gene051984.t1	AT1G54080	40.964	83	44	2	36	113	146	228	1.87e-12	63.2
MS.gene051984.t1	AT4G00830	34.783	92	57	2	26	116	106	195	2.21e-12	63.2
MS.gene051984.t1	AT4G00830	34.783	92	57	2	26	116	106	195	2.21e-12	63.2
MS.gene051984.t1	AT4G00830	34.783	92	57	2	26	116	106	195	2.21e-12	63.2
MS.gene051984.t1	AT4G00830	34.783	92	57	2	26	116	106	195	2.23e-12	63.2
MS.gene051984.t1	AT4G00830	34.783	92	57	2	26	116	106	195	2.23e-12	63.2
MS.gene051984.t1	AT2G37510	36.275	102	39	2	35	110	31	132	2.83e-12	60.8
MS.gene051984.t1	AT2G19380	33.333	84	56	0	33	116	403	486	2.86e-12	62.8
MS.gene051984.t1	AT5G11412	34.211	76	50	0	38	113	52	127	3.11e-12	60.8
MS.gene051984.t1	AT5G53720	36.364	77	49	0	37	113	8	84	3.80e-12	58.9
MS.gene051984.t1	AT4G03110	36.471	85	53	1	38	121	349	433	4.17e-12	62.4
MS.gene051984.t1	AT1G73530	33.333	81	53	1	37	116	76	156	4.63e-12	60.5
MS.gene051984.t1	AT4G20030	34.286	105	60	4	26	125	31	131	5.57e-12	59.7
MS.gene051984.t1	AT3G18610	39.535	86	49	2	37	122	383	465	6.05e-12	62.0
MS.gene051984.t1	AT5G53680	34.615	78	49	1	38	113	13	90	8.73e-12	59.3
MS.gene051984.t1	AT3G18610	39.535	86	49	2	37	122	353	435	9.39e-12	61.2
MS.gene051984.t1	AT1G03457	34.177	79	51	1	38	115	225	303	9.86e-12	60.8
MS.gene051984.t1	AT1G47490	37.234	94	57	2	40	131	199	292	1.21e-11	60.8
MS.gene051984.t1	AT3G18610	39.535	86	49	2	37	122	323	405	1.27e-11	60.8
MS.gene051984.t1	AT5G51300	36.585	82	51	1	33	113	475	556	1.65e-11	60.8
MS.gene051984.t1	AT5G51300	36.585	82	51	1	33	113	475	556	1.65e-11	60.8
MS.gene051984.t1	AT5G51300	36.585	82	51	1	33	113	475	556	1.65e-11	60.8
MS.gene051984.t1	AT1G47490	37.234	94	57	2	40	131	199	292	2.09e-11	60.5
MS.gene051984.t1	AT5G47620	33.766	77	51	0	37	113	45	121	2.19e-11	60.1
MS.gene051984.t1	AT3G15010	40.278	72	43	0	35	106	72	143	3.09e-11	59.7
MS.gene051984.t1	AT3G15010	40.278	72	43	0	35	106	72	143	3.09e-11	59.7
MS.gene051984.t1	AT5G54900	39.506	81	47	2	40	118	156	236	3.22e-11	59.7
MS.gene051984.t1	AT5G40490	32.927	82	54	1	37	117	112	193	3.34e-11	59.7
MS.gene051984.t1	AT1G13690	37.333	75	46	1	40	113	15	89	3.59e-11	58.2
MS.gene051984.t1	AT3G10400	37.975	79	48	1	38	115	57	135	4.76e-11	58.9
MS.gene051984.t1	AT1G47500	36.170	94	58	2	40	131	201	294	7.69e-11	58.5
MS.gene051984.t1	AT1G47500	36.170	94	58	2	40	131	201	294	8.78e-11	58.5

Find 45 sgRNAs with CRISPR-Local

Find 47 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGGATGGACAGGATTTAAA+TGG	0.332884	2.2:+3525262	MS.gene051984:CDS
ACTGGAAGATCAAGGGGATT+TGG	0.334462	2.2:+3525193	MS.gene051984:CDS
ATGGGTTTCTGTAACAAGAT+TGG	0.366720	2.2:+3524971	MS.gene051984:CDS
TGCAACTTCAGCACTCTCTA+TGG	0.384662	2.2:+3525243	MS.gene051984:CDS
CATAGGACACACGAATGTTT+CGG	0.398236	2.2:-3525285	None:intergenic
GTGGCTATGGCGGCGGTGGT+TGG	0.402510	2.2:+3525344	MS.gene051984:CDS
GAGGAGGAGCTTGAGTGCTC+TGG	0.408995	2.2:-3525018	None:intergenic
TGTTGATGATCAGTCTCTTA+AGG	0.437494	2.2:+3525114	MS.gene051984:CDS
CCTCGTCCCGGAGGTGGCTA+TGG	0.454161	2.2:+3525331	MS.gene051984:CDS
TAGTTAAGCATGGATGAAAC+AGG	0.461015	2.2:-3525040	None:intergenic
ACCGCCGCCATAGCCACCTC+CGG	0.464601	2.2:-3525338	None:intergenic
AGCACTCTCTATGGATGGAC+AGG	0.475981	2.2:+3525252	MS.gene051984:CDS
GGTGGACCTCGTCCCGGAGG+TGG	0.479282	2.2:+3525325	MS.gene051984:CDS
GGAGGTGGCTATGGCGGCGG+TGG	0.485306	2.2:+3525340	MS.gene051984:CDS
CCCGGAGGTGGCTATGGCGG+CGG	0.489224	2.2:+3525337	MS.gene051984:CDS
GATCATCAACATGGTAAGAA+AGG	0.505312	2.2:-3525102	None:intergenic
CCATAGCCACCTCCGGGACG+AGG	0.515742	2.2:-3525331	None:intergenic
ATAGAGACACTGGAAGATCA+AGG	0.517492	2.2:+3525185	MS.gene051984:CDS
AGGAGGAGCTTGAGTGCTCT+GGG	0.530346	2.2:-3525017	None:intergenic
CAGGCTGGTGGACCTCGTCC+CGG	0.532193	2.2:+3525319	MS.gene051984:CDS
AAGGATGCATTTACAACCTA+CGG	0.532917	2.2:+3525133	MS.gene051984:CDS
GGGTACCACCTTGCCTCAAG+AGG	0.543148	2.2:-3524997	None:intergenic
GTCCTATGCAAATGATAGAC+AGG	0.554294	2.2:+3525300	MS.gene051984:CDS
CCGCCGCCATAGCCACCTCC+GGG	0.576120	2.2:-3525337	None:intergenic
GTTATCACTGATAGAGACAC+TGG	0.581409	2.2:+3525175	MS.gene051984:CDS
ACTTCAGCACTCTCTATGGA+TGG	0.581897	2.2:+3525247	MS.gene051984:CDS
TATGCAAATGATAGACAGGC+TGG	0.581925	2.2:+3525304	MS.gene051984:CDS
TGCCTCAACCACTTCTCCGT+AGG	0.589946	2.2:-3525149	None:intergenic
TAGAGACACTGGAAGATCAA+GGG	0.594765	2.2:+3525186	MS.gene051984:CDS
CGTCCCGGAGGTGGCTATGG+CGG	0.599295	2.2:+3525334	MS.gene051984:CDS
AGAGACACTGGAAGATCAAG+GGG	0.604078	2.2:+3525187	MS.gene051984:CDS
ATTTACAACCTACGGAGAAG+TGG	0.607456	2.2:+3525141	MS.gene051984:CDS
AGCATGGATGAAACAGGAGG+AGG	0.619418	2.2:-3525034	None:intergenic
AACCTACGGAGAAGTGGTTG+AGG	0.621999	2.2:+3525147	MS.gene051984:CDS
GTGGCGCAAGTAGTTAAGCA+TGG	0.622132	2.2:-3525050	None:intergenic
ATTGGAAACCTCTTGAGGCA+AGG	0.631105	2.2:+3524989	MS.gene051984:CDS
TGAAGTTGCAGACTCTTGAG+TGG	0.654691	2.2:-3525230	None:intergenic
AGCCTGTCTATCATTTGCAT+AGG	0.655393	2.2:-3525302	None:intergenic
ACAAGATTGGAAACCTCTTG+AGG	0.658250	2.2:+3524984	MS.gene051984:CDS
GCAAATGATAGACAGGCTGG+TGG	0.673979	2.2:+3525307	MS.gene051984:CDS
GCTGGTGGACCTCGTCCCGG+AGG	0.683775	2.2:+3525322	MS.gene051984:CDS
GGAAACCTCTTGAGGCAAGG+TGG	0.688707	2.2:+3524992	MS.gene051984:CDS
TAAGAGACTGATCATCAACA+TGG	0.702631	2.2:-3525111	None:intergenic
TTAAGCATGGATGAAACAGG+AGG	0.710474	2.2:-3525037	None:intergenic
AAAGCTTGCTTGAAGACATG+TGG	0.718559	2.2:-3525069	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAGGATGCATTTACAACCTA+CGG	+	chr2.2:3525133-3525152	MS.gene051984:CDS	35.0%
	ATGGATGGACAGGATTTAAA+TGG	+	chr2.2:3525262-3525281	MS.gene051984:CDS	35.0%
	ATGGGTTTCTGTAACAAGAT+TGG	+	chr2.2:3524971-3524990	MS.gene051984:CDS	35.0%
	GATCATCAACATGGTAAGAA+AGG	-	chr2.2:3525105-3525124	None:intergenic	35.0%
	TAAGAGACTGATCATCAACA+TGG	-	chr2.2:3525114-3525133	None:intergenic	35.0%
	TAGTTAAGCATGGATGAAAC+AGG	-	chr2.2:3525043-3525062	None:intergenic	35.0%
!	TCTTCAAGCAAGCTTTTCAT+TGG	+	chr2.2:3525076-3525095	MS.gene051984:CDS	35.0%
!!	TGTTGATGATCAGTCTCTTA+AGG	+	chr2.2:3525114-3525133	MS.gene051984:CDS	35.0%
	ACAAGATTGGAAACCTCTTG+AGG	+	chr2.2:3524984-3525003	MS.gene051984:CDS	40.0%
	AGCCTGTCTATCATTTGCAT+AGG	-	chr2.2:3525305-3525324	None:intergenic	40.0%
	ATAGAGACACTGGAAGATCA+AGG	+	chr2.2:3525185-3525204	MS.gene051984:CDS	40.0%
	ATTTACAACCTACGGAGAAG+TGG	+	chr2.2:3525141-3525160	MS.gene051984:CDS	40.0%
	CATAGGACACACGAATGTTT+CGG	-	chr2.2:3525288-3525307	None:intergenic	40.0%
	GTCCTATGCAAATGATAGAC+AGG	+	chr2.2:3525300-3525319	MS.gene051984:CDS	40.0%
	GTTATCACTGATAGAGACAC+TGG	+	chr2.2:3525175-3525194	MS.gene051984:CDS	40.0%
	TAGAGACACTGGAAGATCAA+GGG	+	chr2.2:3525186-3525205	MS.gene051984:CDS	40.0%
	TATGCAAATGATAGACAGGC+TGG	+	chr2.2:3525304-3525323	MS.gene051984:CDS	40.0%
	TTAAGCATGGATGAAACAGG+AGG	-	chr2.2:3525040-3525059	None:intergenic	40.0%
!	AAAGCTTGCTTGAAGACATG+TGG	-	chr2.2:3525072-3525091	None:intergenic	40.0%
!	TCAAGCAAGCTTTTCATTGG+AGG	+	chr2.2:3525079-3525098	MS.gene051984:CDS	40.0%
	ACTGGAAGATCAAGGGGATT+TGG	+	chr2.2:3525193-3525212	MS.gene051984:CDS	45.0%
	ACTTCAGCACTCTCTATGGA+TGG	+	chr2.2:3525247-3525266	MS.gene051984:CDS	45.0%
	AGAGACACTGGAAGATCAAG+GGG	+	chr2.2:3525187-3525206	MS.gene051984:CDS	45.0%
	ATTGGAAACCTCTTGAGGCA+AGG	+	chr2.2:3524989-3525008	MS.gene051984:CDS	45.0%
	TGAAGTTGCAGACTCTTGAG+TGG	-	chr2.2:3525233-3525252	None:intergenic	45.0%
	TGCAACTTCAGCACTCTCTA+TGG	+	chr2.2:3525243-3525262	MS.gene051984:CDS	45.0%
	AACCTACGGAGAAGTGGTTG+AGG	+	chr2.2:3525147-3525166	MS.gene051984:CDS	50.0%
	AGCACTCTCTATGGATGGAC+AGG	+	chr2.2:3525252-3525271	MS.gene051984:CDS	50.0%
	AGCATGGATGAAACAGGAGG+AGG	-	chr2.2:3525037-3525056	None:intergenic	50.0%
	GCAAATGATAGACAGGCTGG+TGG	+	chr2.2:3525307-3525326	MS.gene051984:CDS	50.0%
	GTGGCGCAAGTAGTTAAGCA+TGG	-	chr2.2:3525053-3525072	None:intergenic	50.0%
	AGGAGGAGCTTGAGTGCTCT+GGG	-	chr2.2:3525020-3525039	None:intergenic	55.0%
	GGAAACCTCTTGAGGCAAGG+TGG	+	chr2.2:3524992-3525011	MS.gene051984:CDS	55.0%
	TGCCTCAACCACTTCTCCGT+AGG	-	chr2.2:3525152-3525171	None:intergenic	55.0%
	GAGGAGGAGCTTGAGTGCTC+TGG	-	chr2.2:3525021-3525040	None:intergenic	60.0%
	GGGTACCACCTTGCCTCAAG+AGG	-	chr2.2:3525000-3525019	None:intergenic	60.0%
	ACCGCCGCCATAGCCACCTC+CGG	-	chr2.2:3525341-3525360	None:intergenic	70.0%
	CCATAGCCACCTCCGGGACG+AGG	-	chr2.2:3525334-3525353	None:intergenic	70.0%
	CCTCGTCCCGGAGGTGGCTA+TGG	+	chr2.2:3525331-3525350	MS.gene051984:CDS	70.0%
	CGTCCCGGAGGTGGCTATGG+CGG	+	chr2.2:3525334-3525353	MS.gene051984:CDS	70.0%
	GTGGCTATGGCGGCGGTGGT+TGG	+	chr2.2:3525344-3525363	MS.gene051984:CDS	70.0%
!	CAGGCTGGTGGACCTCGTCC+CGG	+	chr2.2:3525319-3525338	MS.gene051984:CDS	70.0%
	CCCGGAGGTGGCTATGGCGG+CGG	+	chr2.2:3525337-3525356	MS.gene051984:CDS	75.0%
	CCGCCGCCATAGCCACCTCC+GGG	-	chr2.2:3525340-3525359	None:intergenic	75.0%
	GGAGGTGGCTATGGCGGCGG+TGG	+	chr2.2:3525340-3525359	MS.gene051984:CDS	75.0%
	GGTGGACCTCGTCCCGGAGG+TGG	+	chr2.2:3525325-3525344	MS.gene051984:CDS	75.0%
!	GCTGGTGGACCTCGTCCCGG+AGG	+	chr2.2:3525322-3525341	MS.gene051984:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.2	gene	3524971	3525369	3524971	ID=MS.gene051984
chr2.2	mRNA	3524971	3525369	3524971	ID=MS.gene051984.t1;Parent=MS.gene051984
chr2.2	exon	3524971	3525369	3524971	ID=MS.gene051984.t1.exon1;Parent=MS.gene051984.t1
chr2.2	CDS	3524971	3525369	3524971	ID=cds.MS.gene051984.t1;Parent=MS.gene051984.t1

Gene Sequence

>MS.gene051984

ATGGGTTTCTGTAACAAGATTGGAAACCTCTTGAGGCAAGGTGGTACCCAGAGCACTCAAGCTCCTCCTCCTGTTTCATCCATGCTTAACTACTTGCGCCACATGTCTTCAAGCAAGCTTTTCATTGGAGGCCTTTCTTACCATGTTGATGATCAGTCTCTTAAGGATGCATTTACAACCTACGGAGAAGTGGTTGAGGCAAGAGTTATCACTGATAGAGACACTGGAAGATCAAGGGGATTTGGATTTGTCAACTTCACCACTCAAGAGTCTGCAACTTCAGCACTCTCTATGGATGGACAGGATTTAAATGGCCGAAACATTCGTGTGTCCTATGCAAATGATAGACAGGCTGGTGGACCTCGTCCCGGAGGTGGCTATGGCGGCGGTGGTTGGTGA

Protein sequence

>MS.gene051984.t1

MGFCNKIGNLLRQGGTQSTQAPPPVSSMLNYLRHMSSSKLFIGGLSYHVDDQSLKDAFTTYGEVVEARVITDRDTGRSRGFGFVNFTTQESATSALSMDGQDLNGRNIRVSYANDRQAGGPRPGGGYGGGGW