AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70218


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70218.t1 MTR_8g093680 97.410 502 13 0 1 502 1 502 0.0 1011
MS.gene70218.t1 MTR_8g093680 95.098 408 20 0 1 408 1 408 0.0 723
MS.gene70218.t1 MTR_4g088615 32.026 153 104 0 341 493 143 295 4.51e-16 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70218.t1 AT1G64880 64.502 462 151 6 44 502 64 515 0.0 566
MS.gene70218.t1 AT2G33800 32.075 159 108 0 335 493 137 295 2.31e-18 86.3

Find 115 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGAGCATCTGGAGCTTT+AGG 0.197064 4.1:-8358248 None:intergenic
GAGAGAAGAATGAGAGATTA+AGG 0.199671 4.1:+8355293 MS.gene70218:CDS
TTCTGCAGCATAAGCTTAAT+AGG 0.213549 4.1:+8355707 MS.gene70218:CDS
CGGACTGAGTATAGGGTTAT+TGG 0.254625 4.1:+8355634 MS.gene70218:CDS
CCGTAATTGGCAGGGTTATC+AGG 0.268269 4.1:-8355766 None:intergenic
AAGAAGTTCCATCACTATTC+TGG 0.272614 4.1:-8355245 None:intergenic
TGAGAGCATCTGGAGCTTTA+GGG 0.292106 4.1:-8358247 None:intergenic
ATCTGGAGCTTTAGGGCCTT+TGG 0.294046 4.1:-8358240 None:intergenic
CGCTTGACGATGCTTATAAA+TGG 0.295636 4.1:+8355569 MS.gene70218:CDS
AACTTCTCTTGGACATCCTT+TGG 0.327728 4.1:-8359793 None:intergenic
AAAACCAGCTAAATGTAGTA+TGG 0.331398 4.1:-8359508 None:intergenic
TTGTTCCAAGGTATCCATAT+TGG 0.331911 4.1:-8355815 None:intergenic
CTTGTCAATAACATCAAGTT+TGG 0.343906 4.1:-8355947 None:intergenic
TTGCTGAATGAGACCGTAAT+TGG 0.347603 4.1:-8355779 None:intergenic
GCTGAACTTGAGTATACATT+TGG 0.357489 4.1:+8355988 MS.gene70218:CDS
TCTGCAGCATAAGCTTAATA+GGG 0.363272 4.1:+8355708 MS.gene70218:CDS
TGGCCTGCTTCCACTGCAAC+TGG 0.368005 4.1:+8359459 MS.gene70218:CDS
TGTTCCAAGGTATCCATATT+GGG 0.371200 4.1:-8355814 None:intergenic
AGCTCCAGATGCTCTCAATA+AGG 0.374070 4.1:+8358253 MS.gene70218:CDS
TAAGCTTCGGACTGAGTATA+GGG 0.382822 4.1:+8355627 MS.gene70218:CDS
AATAGTGATGGAACTTCTTA+AGG 0.389577 4.1:+8355249 MS.gene70218:CDS
ATGATTTCGAAAGGAAGTTC+AGG 0.391603 4.1:+8355506 MS.gene70218:CDS
ACTCCATAAGATCACCTTTA+GGG 0.395270 4.1:+8355152 MS.gene70218:CDS
TTAAGCTTCGGACTGAGTAT+AGG 0.395446 4.1:+8355626 MS.gene70218:CDS
CAGCTAAATGTAGTATGGTT+TGG 0.403294 4.1:-8359503 None:intergenic
ATACCCTAAAGGTGATCTTA+TGG 0.406034 4.1:-8355155 None:intergenic
GCTTAATAGGGCTTTGAGAT+TGG 0.406578 4.1:+8355720 MS.gene70218:CDS
CCTGATAACCCTGCCAATTA+CGG 0.407731 4.1:+8355766 MS.gene70218:CDS
CAGTGATGATGAGGAAGATC+TGG 0.420747 4.1:+8355462 MS.gene70218:CDS
AGAGAAGAATGAGAGATTAA+GGG 0.425455 4.1:+8355294 MS.gene70218:CDS
CAATTGCAACCAATGTGTTT+CGG 0.427006 4.1:+8355128 MS.gene70218:CDS
GGTACCTTATTGAGAGCATC+TGG 0.431173 4.1:-8358257 None:intergenic
CGAGGATGGTTATGATTACA+TGG 0.431612 4.1:+8355351 MS.gene70218:CDS
ATGGATACCTTGGAACAATC+TGG 0.434043 4.1:+8355820 MS.gene70218:CDS
CAGTTCGGCCAAACTTCTCT+TGG 0.436228 4.1:-8359804 None:intergenic
AACTCCATAAGATCACCTTT+AGG 0.436596 4.1:+8355151 MS.gene70218:CDS
AAGGATGTCCAAGAGAAGTT+TGG 0.439397 4.1:+8359796 MS.gene70218:CDS
GGAACAATCTGGATTTGAAA+AGG 0.439501 4.1:+8355831 MS.gene70218:CDS
CCTTTGTGACTTTACAAGTT+CGG 0.442059 4.1:-8358061 None:intergenic
GCATCTTCATCTCCTTGAGC+AGG 0.449364 4.1:-8355862 None:intergenic
GAGACTCTTGCCATGAAAAC+GGG 0.453113 4.1:-8355203 None:intergenic
TAAAGTGGTTACTGAGCAAA+AGG 0.454004 4.1:+8355675 MS.gene70218:CDS
TTAGCATGTGGCAACTATAA+TGG 0.455598 4.1:+8358197 MS.gene70218:CDS
TGAATGGGTTATATTCAGTA+TGG 0.456241 4.1:+8355073 None:intergenic
GCTTGAAAAGGAGAAGCTTA+AGG 0.457065 4.1:+8355396 MS.gene70218:CDS
AGAGACTCTTGCCATGAAAA+CGG 0.460723 4.1:-8355204 None:intergenic
GGCAACTATAATGGTGTTGT+TGG 0.461710 4.1:+8358206 MS.gene70218:CDS
ATCATAACCATCCTCGGTCT+CGG 0.463201 4.1:-8355344 None:intergenic
ACAGCCTTAACTGTATTATG+AGG 0.478809 4.1:-8359651 None:intergenic
AAATCCTCATAATACAGTTA+AGG 0.482904 4.1:+8359647 MS.gene70218:CDS
ATCGTCAAGCGTATCCGCTT+CGG 0.484924 4.1:-8355557 None:intergenic
TTAAGGAGGTGGAGAAGGAT+AGG 0.486790 4.1:+8355266 MS.gene70218:CDS
ACTGCAACTGGCATGAAGGC+CGG 0.491223 4.1:+8359471 MS.gene70218:CDS
ATGCCAGTTGCAGTGGAAGC+AGG 0.491431 4.1:-8359462 None:intergenic
TCTTATCGAGAAGCTTGAAA+AGG 0.493738 4.1:+8355384 MS.gene70218:CDS
TGAATGAGACCGTAATTGGC+AGG 0.497884 4.1:-8355775 None:intergenic
CAAACCATACTACATTTAGC+TGG 0.497943 4.1:+8359504 MS.gene70218:CDS
AAGAATGAGAGATTAAGGGC+TGG 0.507014 4.1:+8355298 MS.gene70218:CDS
TAATTCGATAGGTGTATCTC+TGG 0.507614 4.1:+8359439 MS.gene70218:intron
TGAGTATACATTTGGAAGGA+AGG 0.514885 4.1:+8355996 MS.gene70218:CDS
GGCCTTCATGCCAGTTGCAG+TGG 0.518184 4.1:-8359469 None:intergenic
AATACTTCTCGACCACAGTT+CGG 0.537088 4.1:-8359819 None:intergenic
CTCGGTCTCGGCATCAATGT+CGG 0.538282 4.1:-8355332 None:intergenic
TATGGTTTGGACTATTCTGC+CGG 0.538461 4.1:-8359490 None:intergenic
TTTGAGATTGGTGCAGTGGA+AGG 0.538637 4.1:+8355732 MS.gene70218:CDS
GATGGAACTTCTTAAGGAGG+TGG 0.540444 4.1:+8355255 MS.gene70218:CDS
ACTTCTTAAGGAGGTGGAGA+AGG 0.540719 4.1:+8355261 MS.gene70218:CDS
GGGGCCCAATATGGATACCT+TGG 0.542164 4.1:+8355810 MS.gene70218:CDS
TTCTGATGCCAGAATAGTGA+TGG 0.552389 4.1:+8355237 MS.gene70218:CDS
ACTCATGAATCGTCTTAAAG+TGG 0.555879 4.1:+8355660 MS.gene70218:CDS
GGTCTCATTCAGCAAGAACA+AGG 0.560430 4.1:+8355787 MS.gene70218:CDS
CATGTAATCATAACCATCCT+CGG 0.563559 4.1:-8355350 None:intergenic
GGGCTTTGAGATTGGTGCAG+TGG 0.565478 4.1:+8355728 MS.gene70218:CDS
TTCCACTGCAACTGGCATGA+AGG 0.566604 4.1:+8359467 MS.gene70218:CDS
TCGAGAAGTATTTGTTGTGA+TGG 0.567736 4.1:+8359830 MS.gene70218:CDS
TCTGGATGCTAATCAGAAGA+AGG 0.568563 4.1:+8355480 MS.gene70218:CDS
TACATTTGGAAGGAAGGGTA+AGG 0.569640 4.1:+8356002 MS.gene70218:CDS
GAAACTACCTTTCGGAAAAG+TGG 0.574004 4.1:-8356090 None:intergenic
CCATGAAAACGGGAACATGA+AGG 0.574072 4.1:-8355193 None:intergenic
GGAGAAGCTTAAGGAGACCT+CGG 0.574929 4.1:+8355405 MS.gene70218:CDS
ATTGATGCCGAGACCGAGGA+TGG 0.579776 4.1:+8355337 MS.gene70218:CDS
AAGGAAGGGTAAGGCTCTAG+AGG 0.583467 4.1:+8356011 MS.gene70218:CDS
AGAAGGTTGATGATTTCGAA+AGG 0.585774 4.1:+8355497 MS.gene70218:CDS
TTCAAATCCAGATTGTTCCA+AGG 0.587564 4.1:-8355827 None:intergenic
GAGTATACATTTGGAAGGAA+GGG 0.590258 4.1:+8355997 MS.gene70218:CDS
GTAGTGGCTGCATACCCTAA+AGG 0.593279 4.1:-8355166 None:intergenic
TATGGAGTTCCGAAACACAT+TGG 0.593450 4.1:-8355137 None:intergenic
AACTTGAGTATACATTTGGA+AGG 0.597121 4.1:+8355992 MS.gene70218:CDS
GTCTCATTCAGCAAGAACAA+GGG 0.598152 4.1:+8355788 MS.gene70218:CDS
GTTCCAGATTGAAACGCCAA+AGG 0.599069 4.1:+8359777 MS.gene70218:intron
TCATCACTGTCAGAATCAGT+CGG 0.599404 4.1:-8355448 None:intergenic
TGTTATTGACAAGAGACTTG+AGG 0.599515 4.1:+8355957 MS.gene70218:CDS
GATTCAGAATTTCACCGAAG+CGG 0.607335 4.1:+8355543 MS.gene70218:CDS
AAGGAGGATAAACCTGCTCA+AGG 0.610936 4.1:+8355850 MS.gene70218:CDS
TGGTTACTGAGCAAAAGGAT+AGG 0.618062 4.1:+8355680 MS.gene70218:CDS
TATATTCAGTATGGTAGACA+CGG 0.630793 4.1:+8355082 MS.gene70218:CDS
ACAATCTGGATTTGAAAAGG+AGG 0.632065 4.1:+8355834 MS.gene70218:CDS
CGACATTGATGCCGAGACCG+AGG 0.635504 4.1:+8355333 MS.gene70218:CDS
GAATGAGACCGTAATTGGCA+GGG 0.636313 4.1:-8355774 None:intergenic
TCTCATTCAGCAAGAACAAG+GGG 0.641036 4.1:+8355789 MS.gene70218:CDS
AGTGATGGAACTTCTTAAGG+AGG 0.643210 4.1:+8355252 MS.gene70218:CDS
AGAGAAGTTTGGCCGAACTG+TGG 0.645250 4.1:+8359807 MS.gene70218:CDS
GGAACATGAAGGTAATGTAG+TGG 0.647838 4.1:-8355182 None:intergenic
ATTTCGAAAGGAAGTTCAGG+AGG 0.648062 4.1:+8355509 MS.gene70218:CDS
TGCTGCTGACAACGACGATG+AGG 0.653652 4.1:+8355882 MS.gene70218:CDS
AGAGATCAAAGATCTTGCAG+AGG 0.657591 4.1:+8356035 MS.gene70218:CDS
CCGAACTTGTAAAGTCACAA+AGG 0.657693 4.1:+8358061 MS.gene70218:CDS
TATACTGCTATGTTAGCATG+TGG 0.662521 4.1:+8358185 MS.gene70218:CDS
TGATTCTGACAGTGATGATG+AGG 0.665645 4.1:+8355453 MS.gene70218:CDS
GCATTATGTAGAGCGACACG+AGG 0.669562 4.1:+8359180 MS.gene70218:CDS
TTCGTATCGATTCAACTCCG+AGG 0.679730 4.1:-8355422 None:intergenic
TGTCTTCAAAGCGCTTAATG+CGG 0.682894 4.1:+8359671 MS.gene70218:CDS
TCATTCAGCAAGAACAAGGG+GGG 0.688106 4.1:+8355791 MS.gene70218:CDS
CTCATTCAGCAAGAACAAGG+GGG 0.692267 4.1:+8355790 MS.gene70218:CDS
GAGGATGGTTATGATTACAT+GGG 0.717963 4.1:+8355352 MS.gene70218:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATATCATATTGAAATAA+TGG + chr4.1:8359112-8359131 MS.gene70218:intron 10.0%
!! AATAATAAAAAGATGAAAAG+TGG - chr4.1:8358792-8358811 None:intergenic 15.0%
!!! TTCATTTTAAATGATTTGAA+GGG + chr4.1:8356307-8356326 MS.gene70218:intron 15.0%
!!! TTTTTTTTTTTTGTCTTCAT+AGG + chr4.1:8359611-8359630 MS.gene70218:intron 15.0%
!! AAAAACATAAAAATGGTAAG+TGG - chr4.1:8357965-8357984 None:intergenic 20.0%
!! AAAACATAAAAATGGTAAGT+GGG - chr4.1:8357964-8357983 None:intergenic 20.0%
!! AAGAAACTCTATGATATAAA+CGG - chr4.1:8359290-8359309 None:intergenic 20.0%
!! AGAAAAAGACAACATATTAT+TGG + chr4.1:8355924-8355943 MS.gene70218:CDS 20.0%
!! ATAAAGCAAAAACAAGAATA+TGG - chr4.1:8357935-8357954 None:intergenic 20.0%
!! ATTATAAGTGAAAAAAAGGA+AGG + chr4.1:8357645-8357664 MS.gene70218:intron 20.0%
!! GCAAAAATTTATTGAAATAC+TGG - chr4.1:8359727-8359746 None:intergenic 20.0%
!! TAAAGCAAAAACAAGAATAT+GGG - chr4.1:8357934-8357953 None:intergenic 20.0%
!! TAAGAATTTAGATTGCATAT+GGG - chr4.1:8356442-8356461 None:intergenic 20.0%
!! TGGTTTATTTGAATATAATC+AGG + chr4.1:8359132-8359151 MS.gene70218:intron 20.0%
!! TTAAGAATTTAGATTGCATA+TGG - chr4.1:8356443-8356462 None:intergenic 20.0%
!! TTATAAGTGAAAAAAAGGAA+GGG + chr4.1:8357646-8357665 MS.gene70218:intron 20.0%
!!! AAAAAGAAGAAATTTTCCAA+AGG - chr4.1:8357807-8357826 None:intergenic 20.0%
!!! ACAAATAAAAGCATTTTTGT+AGG + chr4.1:8357839-8357858 MS.gene70218:intron 20.0%
!!! AGAAATAAGAAATGTTTTGA+GGG - chr4.1:8356996-8357015 None:intergenic 20.0%
!!! ATACACCAAATTTAAAACAT+TGG - chr4.1:8358964-8358983 None:intergenic 20.0%
!!! CCTTTTTTTCACTTATAATT+GGG - chr4.1:8357644-8357663 None:intergenic 20.0%
!!! GTTCATTTTAAATGATTTGA+AGG + chr4.1:8356306-8356325 MS.gene70218:intron 20.0%
!!! GTTTAAATTTTTTGCATGTT+AGG - chr4.1:8356509-8356528 None:intergenic 20.0%
!!! TAGAAATAAGAAATGTTTTG+AGG - chr4.1:8356997-8357016 None:intergenic 20.0%
!!! TCCTTTTTTTCACTTATAAT+TGG - chr4.1:8357645-8357664 None:intergenic 20.0%
!!! TTATTCCTCTTTTAAACAAA+GGG + chr4.1:8357249-8357268 MS.gene70218:intron 20.0%
!!! TTTATATCAAGTTTCAAGTA+AGG + chr4.1:8356195-8356214 MS.gene70218:intron 20.0%
!!! TTTGACCAATGTTTTAAATT+TGG + chr4.1:8358956-8358975 MS.gene70218:intron 20.0%
!!! TTTGCTGAAACTTTATATTT+TGG - chr4.1:8359017-8359036 None:intergenic 20.0%
!!! TTTTGGTTAAATAATCGTTT+TGG + chr4.1:8357990-8358009 MS.gene70218:intron 20.0%
! AAATAGATCCATATCTCTTA+TGG - chr4.1:8358396-8358415 None:intergenic 25.0%
! AAATATTATTGATGTCGATG+AGG - chr4.1:8357066-8357085 None:intergenic 25.0%
! AAATCCTCATAATACAGTTA+AGG + chr4.1:8359647-8359666 MS.gene70218:CDS 25.0%
! AACAAACTTAATACTTCCTT+TGG + chr4.1:8357678-8357697 MS.gene70218:intron 25.0%
! AACATCTTATAAAAAGACCA+AGG + chr4.1:8359228-8359247 MS.gene70218:CDS 25.0%
! AACTAAAAAGTTGTATTGGA+GGG - chr4.1:8357501-8357520 None:intergenic 25.0%
! AAGACTTAATAAGATATTGC+TGG - chr4.1:8358281-8358300 None:intergenic 25.0%
! AATATAAAACCCTCTTCATT+TGG - chr4.1:8357527-8357546 None:intergenic 25.0%
! AATATCAGCTAAAATGTCAT+AGG - chr4.1:8359749-8359768 None:intergenic 25.0%
! AGAAACTCTATGATATAAAC+GGG - chr4.1:8359289-8359308 None:intergenic 25.0%
! ATATAAAACCCTCTTCATTT+GGG - chr4.1:8357526-8357545 None:intergenic 25.0%
! ATGTGATGATAGATTGATAT+AGG + chr4.1:8358517-8358536 MS.gene70218:intron 25.0%
! ATTGCATAATAGAAAACATC+TGG + chr4.1:8358624-8358643 MS.gene70218:intron 25.0%
! CAATTTATAATAATCAGCCA+AGG - chr4.1:8358755-8358774 None:intergenic 25.0%
! CCCAATTATAAGTGAAAAAA+AGG + chr4.1:8357641-8357660 MS.gene70218:intron 25.0%
! GCAAAAAATTGATAAGTTTG+AGG + chr4.1:8355594-8355613 MS.gene70218:CDS 25.0%
! TCAAAATCAGATTTCATACT+TGG - chr4.1:8358941-8358960 None:intergenic 25.0%
! TCAATCTATCATCACATAAT+TGG - chr4.1:8358514-8358533 None:intergenic 25.0%
! TCAGAAAAACATGAATCAAT+AGG - chr4.1:8358453-8358472 None:intergenic 25.0%
! TGATAGATTGATATAGGTTA+TGG + chr4.1:8358523-8358542 MS.gene70218:intron 25.0%
! TTTACAAACAAGTATAGACA+CGG - chr4.1:8357907-8357926 None:intergenic 25.0%
!! ATTTTAAATGATTTGAAGGG+TGG + chr4.1:8356310-8356329 MS.gene70218:intron 25.0%
!! CTTATTCCTCTTTTAAACAA+AGG + chr4.1:8357248-8357267 MS.gene70218:intron 25.0%
!! GATGAAAAGTGGAAATTTTT+AGG - chr4.1:8358781-8358800 None:intergenic 25.0%
!! GGATATTATAATCCATGTTT+TGG - chr4.1:8357045-8357064 None:intergenic 25.0%
!! TGAGATATTTGGTTCATAAT+TGG + chr4.1:8358554-8358573 MS.gene70218:intron 25.0%
!!! ACTAAATCAGTTATTTTCCT+TGG + chr4.1:8358735-8358754 MS.gene70218:intron 25.0%
!!! CGAGATTGTATTAGTTTTAA+GGG - chr4.1:8356543-8356562 None:intergenic 25.0%
!!! GAAATAAGAAATGTTTTGAG+GGG - chr4.1:8356995-8357014 None:intergenic 25.0%
!!! GAATTTTAATGTTCCATATG+TGG + chr4.1:8357865-8357884 MS.gene70218:intron 25.0%
!!! TCGAGATTGTATTAGTTTTA+AGG - chr4.1:8356544-8356563 None:intergenic 25.0%
!!! TGTTTTTCTGAGATTTGTAT+TGG + chr4.1:8358462-8358481 MS.gene70218:intron 25.0%
!!! TTTTAAGAATGTCAAGTCAA+AGG + chr4.1:8359527-8359546 MS.gene70218:CDS 25.0%
AAAACCAGCTAAATGTAGTA+TGG - chr4.1:8359511-8359530 None:intergenic 30.0%
AACTTGAGTATACATTTGGA+AGG + chr4.1:8355992-8356011 MS.gene70218:CDS 30.0%
AAGAAAATATGAGAGCAAGT+GGG - chr4.1:8358121-8358140 None:intergenic 30.0%
AAGACTGTAGAAATACAAAG+CGG + chr4.1:8356405-8356424 MS.gene70218:intron 30.0%
AATAATAGAGCCAACATAGT+TGG + chr4.1:8356563-8356582 MS.gene70218:intron 30.0%
AATTTGAATACCTTGTCCTT+TGG + chr4.1:8357788-8357807 MS.gene70218:intron 30.0%
ACATCAGATATTGGCATAAT+TGG + chr4.1:8356870-8356889 MS.gene70218:intron 30.0%
ACTAAAAAGTTGTATTGGAG+GGG - chr4.1:8357500-8357519 None:intergenic 30.0%
AGAGAAGAATGAGAGATTAA+GGG + chr4.1:8355294-8355313 MS.gene70218:CDS 30.0%
AGCTTATAGAAACCACTAAA+CGG + chr4.1:8356834-8356853 MS.gene70218:intron 30.0%
ATCTCTTTATGGAATGTCAT+TGG - chr4.1:8357178-8357197 None:intergenic 30.0%
CAATCTGCATTTAGCAAATA+GGG + chr4.1:8356247-8356266 MS.gene70218:intron 30.0%
CAATTTCAATAACCAAAGTC+TGG + chr4.1:8356366-8356385 MS.gene70218:intron 30.0%
CTTGTCAATAACATCAAGTT+TGG - chr4.1:8355950-8355969 None:intergenic 30.0%
GAAATGTAAATAAAACCTGC+TGG - chr4.1:8358865-8358884 None:intergenic 30.0%
GAACTAAAAAGTTGTATTGG+AGG - chr4.1:8357502-8357521 None:intergenic 30.0%
GACAATTTCACATCTCTTTA+TGG - chr4.1:8357189-8357208 None:intergenic 30.0%
GTTAATAAGCTTGCAACTAT+TGG - chr4.1:8358431-8358450 None:intergenic 30.0%
GTTTCAATTCTCATGATCTA+GGG + chr4.1:8358146-8358165 MS.gene70218:intron 30.0%
TAAGAAAATATGAGAGCAAG+TGG - chr4.1:8358122-8358141 None:intergenic 30.0%
TATAAAACCCTCTTCATTTG+GGG - chr4.1:8357525-8357544 None:intergenic 30.0%
TATATTCAGTATGGTAGACA+CGG + chr4.1:8355082-8355101 MS.gene70218:CDS 30.0%
TGGAAGAAATAGAGTACATT+GGG - chr4.1:8357584-8357603 None:intergenic 30.0%
TGTCATCTGTATAATTCGAT+AGG + chr4.1:8359428-8359447 MS.gene70218:intron 30.0%
TGTTTCAATTCTCATGATCT+AGG + chr4.1:8358145-8358164 MS.gene70218:intron 30.0%
TTACAAACAAGTATAGACAC+GGG - chr4.1:8357906-8357925 None:intergenic 30.0%
TTACTTGTCTCAAATGAGTA+AGG + chr4.1:8359346-8359365 MS.gene70218:intron 30.0%
TTCTCTAACCACTTATGAAA+AGG + chr4.1:8357086-8357105 MS.gene70218:intron 30.0%
! AACCAGTAGCCTTTTATAAT+TGG - chr4.1:8357706-8357725 None:intergenic 30.0%
! AAGAAATTTTCCAAAGGACA+AGG - chr4.1:8357801-8357820 None:intergenic 30.0%
! AATAGTGATGGAACTTCTTA+AGG + chr4.1:8355249-8355268 MS.gene70218:CDS 30.0%
! ACCAGTAGCCTTTTATAATT+GGG - chr4.1:8357705-8357724 None:intergenic 30.0%
! ACTTGCCTAATTTTCTGATT+CGG + chr4.1:8356115-8356134 MS.gene70218:intron 30.0%
! ACTTGCTCTCATATTTTCTT+AGG + chr4.1:8358121-8358140 MS.gene70218:intron 30.0%
! ATTTGTATTGGCAGCTATAT+TGG + chr4.1:8358474-8358493 MS.gene70218:intron 30.0%
! TATTTGATTCGCATGAATTC+AGG - chr4.1:8357118-8357137 None:intergenic 30.0%
! TCAATTTTACATCAAAACCC+TGG - chr4.1:8358031-8358050 None:intergenic 30.0%
! TGAAAAAAAGGAAGGGTTTT+GGG + chr4.1:8357653-8357672 MS.gene70218:intron 30.0%
! TGGTGTATTCTTGAGAATTT+TGG + chr4.1:8358976-8358995 MS.gene70218:intron 30.0%
! TGGTTAGTCATTGAGATATT+TGG + chr4.1:8358543-8358562 MS.gene70218:intron 30.0%
! TTTGTATTGGCAGCTATATT+GGG + chr4.1:8358475-8358494 MS.gene70218:intron 30.0%
! TTTTTGTCTTCATAGGTTGT+TGG + chr4.1:8359618-8359637 MS.gene70218:intron 30.0%
!!! ATCGTTTTGGTTGTTGTATA+TGG + chr4.1:8358003-8358022 MS.gene70218:intron 30.0%
!!! CTTTTTCAGAATGAATTGAC+AGG + chr4.1:8358903-8358922 MS.gene70218:intron 30.0%
!!! TTTTAACTTGCTAAAACTCG+AGG - chr4.1:8356281-8356300 None:intergenic 30.0%
AACTCCATAAGATCACCTTT+AGG + chr4.1:8355151-8355170 MS.gene70218:CDS 35.0%
AAGAAATAGAGTACATTGGG+AGG - chr4.1:8357581-8357600 None:intergenic 35.0%
AAGAAGTTCCATCACTATTC+TGG - chr4.1:8355248-8355267 None:intergenic 35.0%
ACAATCTGGATTTGAAAAGG+AGG + chr4.1:8355834-8355853 MS.gene70218:CDS 35.0%
ACAGCCTTAACTGTATTATG+AGG - chr4.1:8359654-8359673 None:intergenic 35.0%
ACTCATGAATCGTCTTAAAG+TGG + chr4.1:8355660-8355679 MS.gene70218:CDS 35.0%
ACTCCATAAGATCACCTTTA+GGG + chr4.1:8355152-8355171 MS.gene70218:CDS 35.0%
AGAAATAGAGTACATTGGGA+GGG - chr4.1:8357580-8357599 None:intergenic 35.0%
AGAATCAGATGCTTCTAATG+TGG - chr4.1:8356619-8356638 None:intergenic 35.0%
AGAGCAAACACTAAAATTGC+AGG - chr4.1:8359585-8359604 None:intergenic 35.0%
AGATCCATATCTCTTATGGT+GGG - chr4.1:8358392-8358411 None:intergenic 35.0%
ATAAAACCCTCTTCATTTGG+GGG - chr4.1:8357524-8357543 None:intergenic 35.0%
ATACCCTAAAGGTGATCTTA+TGG - chr4.1:8355158-8355177 None:intergenic 35.0%
ATGACAAGCATAAGACATAC+AGG - chr4.1:8359398-8359417 None:intergenic 35.0%
ATGATTTCGAAAGGAAGTTC+AGG + chr4.1:8355506-8355525 MS.gene70218:CDS 35.0%
CAAACCATACTACATTTAGC+TGG + chr4.1:8359504-8359523 MS.gene70218:CDS 35.0%
CAACAATCTTCCAACTATGT+TGG - chr4.1:8356576-8356595 None:intergenic 35.0%
CAACACCGAATCAGAAAATT+AGG - chr4.1:8356123-8356142 None:intergenic 35.0%
CAACATAGTTGGAAGATTGT+TGG + chr4.1:8356574-8356593 MS.gene70218:intron 35.0%
CAATGCATAAGACATGGATA+AGG - chr4.1:8358672-8358691 None:intergenic 35.0%
CAATTGCAACCAATGTGTTT+CGG + chr4.1:8355128-8355147 MS.gene70218:CDS 35.0%
CACTTATAATTGGGACCAAA+GGG - chr4.1:8357635-8357654 None:intergenic 35.0%
CAGCTAAATGTAGTATGGTT+TGG - chr4.1:8359506-8359525 None:intergenic 35.0%
CATAACACAAGACCAAAACA+TGG + chr4.1:8357030-8357049 MS.gene70218:intron 35.0%
CATGTAATCATAACCATCCT+CGG - chr4.1:8355353-8355372 None:intergenic 35.0%
CCTTTGGTCCCAATTATAAA+AGG + chr4.1:8357694-8357713 MS.gene70218:intron 35.0%
CCTTTGTGACTTTACAAGTT+CGG - chr4.1:8358064-8358083 None:intergenic 35.0%
CTAAAAAGTTGTATTGGAGG+GGG - chr4.1:8357499-8357518 None:intergenic 35.0%
CTATAAGCTTAATGTTGACG+CGG - chr4.1:8356823-8356842 None:intergenic 35.0%
GAGAGAAGAATGAGAGATTA+AGG + chr4.1:8355293-8355312 MS.gene70218:CDS 35.0%
GAGGATGGTTATGATTACAT+GGG + chr4.1:8355352-8355371 MS.gene70218:CDS 35.0%
GAGTATACATTTGGAAGGAA+GGG + chr4.1:8355997-8356016 MS.gene70218:CDS 35.0%
GCAATCTGCATTTAGCAAAT+AGG + chr4.1:8356246-8356265 MS.gene70218:intron 35.0%
GCTGAACTTGAGTATACATT+TGG + chr4.1:8355988-8356007 MS.gene70218:CDS 35.0%
GGAACAATCTGGATTTGAAA+AGG + chr4.1:8355831-8355850 MS.gene70218:CDS 35.0%
GGGGAACTAAAAAGTTGTAT+TGG - chr4.1:8357505-8357524 None:intergenic 35.0%
GTCCAATGAACATCAGATAT+TGG + chr4.1:8356861-8356880 MS.gene70218:intron 35.0%
GTGGAAGAAATAGAGTACAT+TGG - chr4.1:8357585-8357604 None:intergenic 35.0%
TAAAAAGTTGTATTGGAGGG+GGG - chr4.1:8357498-8357517 None:intergenic 35.0%
TAAAGTGGTTACTGAGCAAA+AGG + chr4.1:8355675-8355694 MS.gene70218:CDS 35.0%
TAAATAATGAGCAGCTTGGT+TGG + chr4.1:8356476-8356495 MS.gene70218:intron 35.0%
TAATTCGATAGGTGTATCTC+TGG + chr4.1:8359439-8359458 MS.gene70218:intron 35.0%
TACTCTTACTTTCTCACCTT+AGG + chr4.1:8357278-8357297 MS.gene70218:intron 35.0%
TAGATCCATATCTCTTATGG+TGG - chr4.1:8358393-8358412 None:intergenic 35.0%
TAGCTAAATAATGAGCAGCT+TGG + chr4.1:8356472-8356491 MS.gene70218:intron 35.0%
TATACTGCTATGTTAGCATG+TGG + chr4.1:8358185-8358204 MS.gene70218:CDS 35.0%
TCACTTATAATTGGGACCAA+AGG - chr4.1:8357636-8357655 None:intergenic 35.0%
TCCCAATTATAAAAGGCTAC+TGG + chr4.1:8357701-8357720 MS.gene70218:intron 35.0%
TCTGCAGCATAAGCTTAATA+GGG + chr4.1:8355708-8355727 MS.gene70218:CDS 35.0%
TCTTATCGAGAAGCTTGAAA+AGG + chr4.1:8355384-8355403 MS.gene70218:CDS 35.0%
TCTTCAAGTCATGCTTAAGT+TGG + chr4.1:8358301-8358320 MS.gene70218:intron 35.0%
TGACCAAAAAAAGCTGAAGA+TGG + chr4.1:8359558-8359577 MS.gene70218:intron 35.0%
TGAGTATACATTTGGAAGGA+AGG + chr4.1:8355996-8356015 MS.gene70218:CDS 35.0%
TGATATAAACGGGCAATTAC+TGG - chr4.1:8359279-8359298 None:intergenic 35.0%
TGCCAATATCTGATGTTCAT+TGG - chr4.1:8356866-8356885 None:intergenic 35.0%
TGTGATTGCCATTACTCAAA+AGG - chr4.1:8356961-8356980 None:intergenic 35.0%
TGTTATTGACAAGAGACTTG+AGG + chr4.1:8355957-8355976 MS.gene70218:CDS 35.0%
TTAGCATGTGGCAACTATAA+TGG + chr4.1:8358197-8358216 MS.gene70218:CDS 35.0%
TTATAGAAACCACTAAACGG+AGG + chr4.1:8356837-8356856 MS.gene70218:intron 35.0%
TTCAAATCCAGATTGTTCCA+AGG - chr4.1:8355830-8355849 None:intergenic 35.0%
TTCATAACTCGAGTTACAGA+AGG + chr4.1:8358810-8358829 MS.gene70218:intron 35.0%
TTCTATCTATTCTAACCAGC+AGG + chr4.1:8358847-8358866 MS.gene70218:intron 35.0%
TTCTGCAGCATAAGCTTAAT+AGG + chr4.1:8355707-8355726 MS.gene70218:CDS 35.0%
TTGTTCATTACCAGATTCAG+AGG - chr4.1:8356712-8356731 None:intergenic 35.0%
! AGGACAAGCATTTTAAGCTT+CGG + chr4.1:8355614-8355633 MS.gene70218:CDS 35.0%
! ATCCACCCTTTGTTTAAAAG+AGG - chr4.1:8357257-8357276 None:intergenic 35.0%
! CAATAAAAGTGCACCACATA+TGG - chr4.1:8357881-8357900 None:intergenic 35.0%
! CCTTTTATAATTGGGACCAA+AGG - chr4.1:8357697-8357716 None:intergenic 35.0%
! GAAAAAAAGGAAGGGTTTTG+GGG + chr4.1:8357654-8357673 MS.gene70218:intron 35.0%
! GCTTTGTATTTCTACAGTCT+TGG - chr4.1:8356406-8356425 None:intergenic 35.0%
! GGATACAGATTTTACTACCT+TGG - chr4.1:8359248-8359267 None:intergenic 35.0%
! GTGAAAAAAAGGAAGGGTTT+TGG + chr4.1:8357652-8357671 MS.gene70218:intron 35.0%
! GTTACAGAAGGTGTATTAAC+TGG + chr4.1:8358822-8358841 MS.gene70218:intron 35.0%
! TGTTCCAAGGTATCCATATT+GGG - chr4.1:8355817-8355836 None:intergenic 35.0%
! TTCCTCTTTTAAACAAAGGG+TGG + chr4.1:8357252-8357271 MS.gene70218:intron 35.0%
! TTGTTCCAAGGTATCCATAT+TGG - chr4.1:8355818-8355837 None:intergenic 35.0%
! TTTGGTTCATAATTGGTGTG+AGG + chr4.1:8358561-8358580 MS.gene70218:intron 35.0%
!! AAAAAAAGGAAGGGTTTTGG+GGG + chr4.1:8357655-8357674 MS.gene70218:intron 35.0%
!! AGAAGGTTGATGATTTCGAA+AGG + chr4.1:8355497-8355516 MS.gene70218:CDS 35.0%
!! ATATGGTTTGCTTCCTCTTT+AGG - chr4.1:8357146-8357165 None:intergenic 35.0%
!! TATGGTTTGCTTCCTCTTTA+GGG - chr4.1:8357145-8357164 None:intergenic 35.0%
!! TCTTTGTGCCTTTTGAGTAA+TGG + chr4.1:8356950-8356969 MS.gene70218:intron 35.0%
!! TGGTCTTGTGTTATGAGATA+TGG - chr4.1:8357025-8357044 None:intergenic 35.0%
!! TTTGATTTGTTGCCAGACTT+TGG - chr4.1:8356381-8356400 None:intergenic 35.0%
AAAAAGTTGTATTGGAGGGG+GGG - chr4.1:8357497-8357516 None:intergenic 40.0%
AAACTCCCAAACAAAGCCTA+AGG - chr4.1:8357297-8357316 None:intergenic 40.0%
AACTTCTCTTGGACATCCTT+TGG - chr4.1:8359796-8359815 None:intergenic 40.0%
AAGAATGAGAGATTAAGGGC+TGG + chr4.1:8355298-8355317 MS.gene70218:CDS 40.0%
AAGACATACAGGATAAACGC+AGG - chr4.1:8359387-8359406 None:intergenic 40.0%
AAGGATGTCCAAGAGAAGTT+TGG + chr4.1:8359796-8359815 MS.gene70218:CDS 40.0%
AATACTTCTCGACCACAGTT+CGG - chr4.1:8359822-8359841 None:intergenic 40.0%
AGAGACTCTTGCCATGAAAA+CGG - chr4.1:8355207-8355226 None:intergenic 40.0%
AGAGATCAAAGATCTTGCAG+AGG + chr4.1:8356035-8356054 MS.gene70218:CDS 40.0%
ATCAAATACCACCCCTAAAG+AGG + chr4.1:8357130-8357149 MS.gene70218:intron 40.0%
ATGGATACCTTGGAACAATC+TGG + chr4.1:8355820-8355839 MS.gene70218:CDS 40.0%
ATTTCGAAAGGAAGTTCAGG+AGG + chr4.1:8355509-8355528 MS.gene70218:CDS 40.0%
CCGAACTTGTAAAGTCACAA+AGG + chr4.1:8358061-8358080 MS.gene70218:CDS 40.0%
CGAGGATGGTTATGATTACA+TGG + chr4.1:8355351-8355370 MS.gene70218:CDS 40.0%
CGCTTGACGATGCTTATAAA+TGG + chr4.1:8355569-8355588 MS.gene70218:CDS 40.0%
GAAACTACCTTTCGGAAAAG+TGG - chr4.1:8356093-8356112 None:intergenic 40.0%
GAAATAGAGTACATTGGGAG+GGG - chr4.1:8357579-8357598 None:intergenic 40.0%
GATTCAGAATTTCACCGAAG+CGG + chr4.1:8355543-8355562 MS.gene70218:CDS 40.0%
GCAAGTGGGAAAAACATAGA+TGG - chr4.1:8358107-8358126 None:intergenic 40.0%
GCAAGTGTGAAACTACCTTT+CGG - chr4.1:8356101-8356120 None:intergenic 40.0%
GCTTGAAAAGGAGAAGCTTA+AGG + chr4.1:8355396-8355415 MS.gene70218:CDS 40.0%
GGAACATGAAGGTAATGTAG+TGG - chr4.1:8355185-8355204 None:intergenic 40.0%
GGTTGTTGTATATGGTTCCA+GGG + chr4.1:8358011-8358030 MS.gene70218:intron 40.0%
GTCATTGGTCAAAGCAGATA+TGG - chr4.1:8357163-8357182 None:intergenic 40.0%
GTCTCATTCAGCAAGAACAA+GGG + chr4.1:8355788-8355807 MS.gene70218:CDS 40.0%
GTGGGAAAAACATAGATGGA+AGG - chr4.1:8358103-8358122 None:intergenic 40.0%
GTTGTGGTGAGAGATAATGA+AGG - chr4.1:8356765-8356784 None:intergenic 40.0%
TAAGCTTCGGACTGAGTATA+GGG + chr4.1:8355627-8355646 MS.gene70218:CDS 40.0%
TACATTTGGAAGGAAGGGTA+AGG + chr4.1:8356002-8356021 MS.gene70218:CDS 40.0%
TATAATTGGGACCAAAGGGA+GGG - chr4.1:8357631-8357650 None:intergenic 40.0%
TATGGAGTTCCGAAACACAT+TGG - chr4.1:8355140-8355159 None:intergenic 40.0%
TCAATTCTCATGATCTAGGG+AGG + chr4.1:8358149-8358168 MS.gene70218:intron 40.0%
TCATAATTGGTGTGAGGATC+TGG + chr4.1:8358567-8358586 MS.gene70218:intron 40.0%
TCATCACTGTCAGAATCAGT+CGG - chr4.1:8355451-8355470 None:intergenic 40.0%
TCTCAAATGAGTAAGGAACG+AGG + chr4.1:8359353-8359372 MS.gene70218:intron 40.0%
TCTCATTCAGCAAGAACAAG+GGG + chr4.1:8355789-8355808 MS.gene70218:CDS 40.0%
TCTGGATGCTAATCAGAAGA+AGG + chr4.1:8355480-8355499 MS.gene70218:CDS 40.0%
TGGTTACTGAGCAAAAGGAT+AGG + chr4.1:8355680-8355699 MS.gene70218:CDS 40.0%
TGGTTGTTGTATATGGTTCC+AGG + chr4.1:8358010-8358029 MS.gene70218:intron 40.0%
TTAAGCTTCGGACTGAGTAT+AGG + chr4.1:8355626-8355645 MS.gene70218:CDS 40.0%
TTAGTTCCCCCAAATGAAGA+GGG + chr4.1:8357515-8357534 MS.gene70218:intron 40.0%
TTATAATTGGGACCAAAGGG+AGG - chr4.1:8357632-8357651 None:intergenic 40.0%
TTCTGATGCCAGAATAGTGA+TGG + chr4.1:8355237-8355256 MS.gene70218:CDS 40.0%
TTGCTGAATGAGACCGTAAT+TGG - chr4.1:8355782-8355801 None:intergenic 40.0%
! AGTATGGTAGACACGGTTTT+CGG + chr4.1:8355089-8355108 MS.gene70218:CDS 40.0%
! AGTGATGGAACTTCTTAAGG+AGG + chr4.1:8355252-8355271 MS.gene70218:CDS 40.0%
! CTATATTGGGCACTGTTCTT+TGG + chr4.1:8358488-8358507 MS.gene70218:intron 40.0%
! GGCATGTTCCTTTTCATAAG+TGG - chr4.1:8357097-8357116 None:intergenic 40.0%
! TATGGTTTGGACTATTCTGC+CGG - chr4.1:8359493-8359512 None:intergenic 40.0%
! TGATTCTGACAGTGATGATG+AGG + chr4.1:8355453-8355472 MS.gene70218:CDS 40.0%
! TGTCTTCAAAGCGCTTAATG+CGG + chr4.1:8359671-8359690 MS.gene70218:CDS 40.0%
! TTGCAGAAGCTTTAGCTATG+CGG - chr4.1:8356689-8356708 None:intergenic 40.0%
! TTTAGTTCCCCCAAATGAAG+AGG + chr4.1:8357514-8357533 MS.gene70218:intron 40.0%
! TTTTTCCAAAACCCTCCCTT+TGG + chr4.1:8357617-8357636 MS.gene70218:intron 40.0%
!! AAGAAGACCACTTTTCCGAA+AGG + chr4.1:8356083-8356102 MS.gene70218:CDS 40.0%
!! ATGGTTTGCTTCCTCTTTAG+GGG - chr4.1:8357144-8357163 None:intergenic 40.0%
!! GATAATGAAGGTGTTGTCGT+TGG - chr4.1:8356753-8356772 None:intergenic 40.0%
!! GCTTAATAGGGCTTTGAGAT+TGG + chr4.1:8355720-8355739 MS.gene70218:CDS 40.0%
!! GGCAACTATAATGGTGTTGT+TGG + chr4.1:8358206-8358225 MS.gene70218:CDS 40.0%
!! TCTCACCTTAGGCTTTGTTT+GGG + chr4.1:8357289-8357308 MS.gene70218:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr4.1:8357296-8357315 MS.gene70218:intron 40.0%
!! TTCTCACCTTAGGCTTTGTT+TGG + chr4.1:8357288-8357307 MS.gene70218:intron 40.0%
!!! AAGGGAGGGTTTTGGAAAAA+AGG - chr4.1:8357617-8357636 None:intergenic 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG - chr4.1:8357613-8357632 None:intergenic 40.0%
!!! GGACCATCTTCAGCTTTTTT+TGG - chr4.1:8359564-8359583 None:intergenic 40.0%
!!! GTTGGTTTTGCAAAAGCCAA+AGG + chr4.1:8358224-8358243 MS.gene70218:CDS 40.0%
AAGGAGGATAAACCTGCTCA+AGG + chr4.1:8355850-8355869 MS.gene70218:CDS 45.0%
ACCACCCACCATAAGAGATA+TGG + chr4.1:8358385-8358404 MS.gene70218:intron 45.0%
ACCCACTGTGTGTTCTTTGT+GGG - chr4.1:8357223-8357242 None:intergenic 45.0%
ACTTCTTAAGGAGGTGGAGA+AGG + chr4.1:8355261-8355280 MS.gene70218:CDS 45.0%
AGCTCCAGATGCTCTCAATA+AGG + chr4.1:8358253-8358272 MS.gene70218:CDS 45.0%
ATCATAACCATCCTCGGTCT+CGG - chr4.1:8355347-8355366 None:intergenic 45.0%
CATCCTTTGGCGTTTCAATC+TGG - chr4.1:8359783-8359802 None:intergenic 45.0%
CCATGAAAACGGGAACATGA+AGG - chr4.1:8355196-8355215 None:intergenic 45.0%
CCTGATAACCCTGCCAATTA+CGG + chr4.1:8355766-8355785 MS.gene70218:CDS 45.0%
CGGACTGAGTATAGGGTTAT+TGG + chr4.1:8355634-8355653 MS.gene70218:CDS 45.0%
CTCATTCAGCAAGAACAAGG+GGG + chr4.1:8355790-8355809 MS.gene70218:CDS 45.0%
GAATGAGACCGTAATTGGCA+GGG - chr4.1:8355777-8355796 None:intergenic 45.0%
GAGACTCTTGCCATGAAAAC+GGG - chr4.1:8355206-8355225 None:intergenic 45.0%
GAGTGCTAGTACGATGTTAG+TGG - chr4.1:8356913-8356932 None:intergenic 45.0%
GATGGAACTTCTTAAGGAGG+TGG + chr4.1:8355255-8355274 MS.gene70218:CDS 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG - chr4.1:8357604-8357623 None:intergenic 45.0%
GGGCAATTACTGGTAGAAGA+AGG - chr4.1:8359269-8359288 None:intergenic 45.0%
GGTCTCATTCAGCAAGAACA+AGG + chr4.1:8355787-8355806 MS.gene70218:CDS 45.0%
GTTCCAGATTGAAACGCCAA+AGG + chr4.1:8359777-8359796 MS.gene70218:intron 45.0%
TCATTCAGCAAGAACAAGGG+GGG + chr4.1:8355791-8355810 MS.gene70218:CDS 45.0%
TGAATGAGACCGTAATTGGC+AGG - chr4.1:8355778-8355797 None:intergenic 45.0%
TGCAATTCCAGTGAGAGAAC+AGG - chr4.1:8358610-8358629 None:intergenic 45.0%
TGCGTGCAATGCATAAGACA+TGG - chr4.1:8358678-8358697 None:intergenic 45.0%
TTAAGGAGGTGGAGAAGGAT+AGG + chr4.1:8355266-8355285 MS.gene70218:CDS 45.0%
TTAGTGGAGACACTGAGTAG+AGG - chr4.1:8356897-8356916 None:intergenic 45.0%
TTGGGGGTGGGAAAAATAGA+GGG + chr4.1:8357340-8357359 MS.gene70218:intron 45.0%
TTTAGCTATGCGGAAGGGTT+TGG - chr4.1:8356679-8356698 None:intergenic 45.0%
TTTGGGGGTGGGAAAAATAG+AGG + chr4.1:8357339-8357358 MS.gene70218:intron 45.0%
! AGAAGCTTTAGCTATGCGGA+AGG - chr4.1:8356685-8356704 None:intergenic 45.0%
! CAGTGATGATGAGGAAGATC+TGG + chr4.1:8355462-8355481 MS.gene70218:CDS 45.0%
! CCTTCATGTTCCCGTTTTCA+TGG + chr4.1:8355193-8355212 MS.gene70218:CDS 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr4.1:8357301-8357320 MS.gene70218:intron 45.0%
! GAAGCTTTAGCTATGCGGAA+GGG - chr4.1:8356684-8356703 None:intergenic 45.0%
! TCCATATCTCTTATGGTGGG+TGG - chr4.1:8358389-8358408 None:intergenic 45.0%
! TTTGAGATTGGTGCAGTGGA+AGG + chr4.1:8355732-8355751 MS.gene70218:CDS 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr4.1:8357300-8357319 MS.gene70218:intron 45.0%
!! GGTACCTTATTGAGAGCATC+TGG - chr4.1:8358260-8358279 None:intergenic 45.0%
!! TGAGAGCATCTGGAGCTTTA+GGG - chr4.1:8358250-8358269 None:intergenic 45.0%
!! TTCGTATCGATTCAACTCCG+AGG - chr4.1:8355425-8355444 None:intergenic 45.0%
!! TTGAGAGCATCTGGAGCTTT+AGG - chr4.1:8358251-8358270 None:intergenic 45.0%
!! TTGTCGTTGGTGCTAGTTGT+TGG - chr4.1:8356740-8356759 None:intergenic 45.0%
!! AAAAAAAAAAAACATAAAAA+TGG - chr4.1:8357972-8357991 None:intergenic 5.0%
!!! TTTTATGTTTTTTTTTTTTT+TGG + chr4.1:8357973-8357992 MS.gene70218:intron 5.0%
AAGCTTAATGTTGACGCGGC+AGG - chr4.1:8356819-8356838 None:intergenic 50.0%
AGAGAAGTTTGGCCGAACTG+TGG + chr4.1:8359807-8359826 MS.gene70218:CDS 50.0%
ATAGAGTACATTGGGAGGGG+AGG - chr4.1:8357576-8357595 None:intergenic 50.0%
ATCGTCAAGCGTATCCGCTT+CGG - chr4.1:8355560-8355579 None:intergenic 50.0%
CAGTTCGGCCAAACTTCTCT+TGG - chr4.1:8359807-8359826 None:intergenic 50.0%
CATTGGACACCTCCGTTTAG+TGG - chr4.1:8356849-8356868 None:intergenic 50.0%
CCCACTGTGTGTTCTTTGTG+GGG - chr4.1:8357222-8357241 None:intergenic 50.0%
CCCCACAAAGAACACACAGT+GGG + chr4.1:8357219-8357238 MS.gene70218:intron 50.0%
CCGTAATTGGCAGGGTTATC+AGG - chr4.1:8355769-8355788 None:intergenic 50.0%
GACCCACTGTGTGTTCTTTG+TGG - chr4.1:8357224-8357243 None:intergenic 50.0%
GCATCTTCATCTCCTTGAGC+AGG - chr4.1:8355865-8355884 None:intergenic 50.0%
GCATTATGTAGAGCGACACG+AGG + chr4.1:8359180-8359199 MS.gene70218:CDS 50.0%
GCTTCTGCAACCTCTGAATC+TGG + chr4.1:8356699-8356718 MS.gene70218:intron 50.0%
GGAGAAGCTTAAGGAGACCT+CGG + chr4.1:8355405-8355424 MS.gene70218:CDS 50.0%
GTAGTGGCTGCATACCCTAA+AGG - chr4.1:8355169-8355188 None:intergenic 50.0%
TAGAGTACATTGGGAGGGGA+GGG - chr4.1:8357575-8357594 None:intergenic 50.0%
TCCCCACAAAGAACACACAG+TGG + chr4.1:8357218-8357237 MS.gene70218:intron 50.0%
TCCGATAGAGGGTGACAAGT+GGG - chr4.1:8356796-8356815 None:intergenic 50.0%
TGTGACACCTGTTCTCTCAC+TGG + chr4.1:8358600-8358619 MS.gene70218:intron 50.0%
TTCCACTGCAACTGGCATGA+AGG + chr4.1:8359467-8359486 MS.gene70218:CDS 50.0%
! AAGGAAGGGTAAGGCTCTAG+AGG + chr4.1:8356011-8356030 MS.gene70218:CDS 50.0%
! GTTTGCTTCCTCTTTAGGGG+TGG - chr4.1:8357141-8357160 None:intergenic 50.0%
!! ATCTGGAGCTTTAGGGCCTT+TGG - chr4.1:8358243-8358262 None:intergenic 50.0%
!! CAAGTGGGGTATTGGTGTTG+TGG - chr4.1:8356781-8356800 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr4.1:8357299-8357318 MS.gene70218:intron 50.0%
ACTGCAACTGGCATGAAGGC+CGG + chr4.1:8359471-8359490 MS.gene70218:CDS 55.0%
AGAACAAGGGGGGCCCAATA+TGG + chr4.1:8355801-8355820 MS.gene70218:CDS 55.0%
ATGCCAGTTGCAGTGGAAGC+AGG - chr4.1:8359465-8359484 None:intergenic 55.0%
ATTGATGCCGAGACCGAGGA+TGG + chr4.1:8355337-8355356 MS.gene70218:CDS 55.0%
CCCCACTTGTCACCCTCTAT+CGG + chr4.1:8356792-8356811 MS.gene70218:intron 55.0%
CCGATAGAGGGTGACAAGTG+GGG - chr4.1:8356795-8356814 None:intergenic 55.0%
CTCGGTCTCGGCATCAATGT+CGG - chr4.1:8355335-8355354 None:intergenic 55.0%
GAGGGTGACAAGTGGGGTAT+TGG - chr4.1:8356789-8356808 None:intergenic 55.0%
GGGGCCCAATATGGATACCT+TGG + chr4.1:8355810-8355829 MS.gene70218:CDS 55.0%
GTATTGGAGGGGGGGTTGAA+GGG - chr4.1:8357489-8357508 None:intergenic 55.0%
GTCCGATAGAGGGTGACAAG+TGG - chr4.1:8356797-8356816 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr4.1:8357305-8357324 MS.gene70218:intron 55.0%
TGCTGCTGACAACGACGATG+AGG + chr4.1:8355882-8355901 MS.gene70218:CDS 55.0%
TGTATTGGAGGGGGGGTTGA+AGG - chr4.1:8357490-8357509 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr4.1:8357304-8357323 MS.gene70218:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr4.1:8357306-8357325 MS.gene70218:intron 55.0%
! TGGGACCAAAGGGAGGGTTT+TGG - chr4.1:8357625-8357644 None:intergenic 55.0%
! TTGGTGTGAGGATCTGGAGC+TGG + chr4.1:8358573-8358592 MS.gene70218:intron 55.0%
!! GGGCTTTGAGATTGGTGCAG+TGG + chr4.1:8355728-8355747 MS.gene70218:CDS 55.0%
ACATTGGGAGGGGAGGGCTT+TGG - chr4.1:8357569-8357588 None:intergenic 60.0%
ATTGGGAGGGGAGGGCTTTG+GGG - chr4.1:8357567-8357586 None:intergenic 60.0%
CATTGGGAGGGGAGGGCTTT+GGG - chr4.1:8357568-8357587 None:intergenic 60.0%
CGACATTGATGCCGAGACCG+AGG + chr4.1:8355333-8355352 MS.gene70218:CDS 60.0%
GAGGGGAAGGAAGGGCTTTG+GGG + chr4.1:8357323-8357342 MS.gene70218:intron 60.0%
GGAGGGGAAGGAAGGGCTTT+GGG + chr4.1:8357322-8357341 MS.gene70218:intron 60.0%
GGCCTTCATGCCAGTTGCAG+TGG - chr4.1:8359472-8359491 None:intergenic 60.0%
TGGCCTGCTTCCACTGCAAC+TGG + chr4.1:8359459-8359478 MS.gene70218:CDS 60.0%
TTGGAGGGGAGGGGAAGGAA+GGG + chr4.1:8357315-8357334 MS.gene70218:intron 60.0%
TTTGGAGGGGAGGGGAAGGA+AGG + chr4.1:8357314-8357333 MS.gene70218:intron 60.0%
! AGGGGAAGGAAGGGCTTTGG+GGG + chr4.1:8357324-8357343 MS.gene70218:intron 60.0%
!! GAAGGAAGGGCTTTGGGGGT+GGG + chr4.1:8357328-8357347 MS.gene70218:intron 60.0%
GACGCGGCAGGTCCGATAGA+GGG - chr4.1:8356807-8356826 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+AGG + chr4.1:8357310-8357329 MS.gene70218:intron 65.0%
GGGAGGGGAAGGAAGGGCTT+TGG + chr4.1:8357321-8357340 MS.gene70218:intron 65.0%
TGACGCGGCAGGTCCGATAG+AGG - chr4.1:8356808-8356827 None:intergenic 65.0%
! TTGGGAGGGGAGGGCTTTGG+GGG - chr4.1:8357566-8357585 None:intergenic 65.0%
!! GGAAGGAAGGGCTTTGGGGG+TGG + chr4.1:8357327-8357346 MS.gene70218:intron 65.0%
!! TGGGAGGGGAGGGCTTTGGG+GGG - chr4.1:8357565-8357584 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 8355076 8359849 8355076 ID=MS.gene70218
chr4.1 mRNA 8355076 8359849 8355076 ID=MS.gene70218.t1;Parent=MS.gene70218
chr4.1 exon 8355076 8356104 8355076 ID=MS.gene70218.t1.exon1;Parent=MS.gene70218.t1
chr4.1 CDS 8355076 8356104 8355076 ID=cds.MS.gene70218.t1;Parent=MS.gene70218.t1
chr4.1 exon 8358032 8358082 8358032 ID=MS.gene70218.t1.exon2;Parent=MS.gene70218.t1
chr4.1 CDS 8358032 8358082 8358032 ID=cds.MS.gene70218.t1;Parent=MS.gene70218.t1
chr4.1 exon 8358167 8358274 8358167 ID=MS.gene70218.t1.exon3;Parent=MS.gene70218.t1
chr4.1 CDS 8358167 8358274 8358167 ID=cds.MS.gene70218.t1;Parent=MS.gene70218.t1
chr4.1 exon 8359154 8359249 8359154 ID=MS.gene70218.t1.exon4;Parent=MS.gene70218.t1
chr4.1 CDS 8359154 8359249 8359154 ID=cds.MS.gene70218.t1;Parent=MS.gene70218.t1
chr4.1 exon 8359450 8359548 8359450 ID=MS.gene70218.t1.exon5;Parent=MS.gene70218.t1
chr4.1 CDS 8359450 8359548 8359450 ID=cds.MS.gene70218.t1;Parent=MS.gene70218.t1
chr4.1 exon 8359633 8359692 8359633 ID=MS.gene70218.t1.exon6;Parent=MS.gene70218.t1
chr4.1 CDS 8359633 8359692 8359633 ID=cds.MS.gene70218.t1;Parent=MS.gene70218.t1
chr4.1 exon 8359784 8359849 8359784 ID=MS.gene70218.t1.exon7;Parent=MS.gene70218.t1
chr4.1 CDS 8359784 8359849 8359784 ID=cds.MS.gene70218.t1;Parent=MS.gene70218.t1
Gene Sequence

>MS.gene70218

ATGGGTTATATTCAGTATGGTAGACACGGTTTTCGGAAGATATTAAGATCTGCAATTGCAACCAATGTGTTTCGGAACTCCATAAGATCACCTTTAGGGTATGCAGCCACTACATTACCTTCATGTTCCCGTTTTCATGGCAAGAGTCTCTATTCTACTACTTCTGATGCCAGAATAGTGATGGAACTTCTTAAGGAGGTGGAGAAGGATAGGTTGAGAGAGAAGAATGAGAGATTAAGGGCTGGTTTAGACACTGCCGACATTGATGCCGAGACCGAGGATGGTTATGATTACATGGGTGTAAGTTCTCTTATCGAGAAGCTTGAAAAGGAGAAGCTTAAGGAGACCTCGGAGTTGAATCGATACGAAGAGCCGACTGATTCTGACAGTGATGATGAGGAAGATCTGGATGCTAATCAGAAGAAGGTTGATGATTTCGAAAGGAAGTTCAGGAGGCATGAAGAAATGATTCAGAATTTCACCGAAGCGGATACGCTTGACGATGCTTATAAATGGATGCAAAAAATTGATAAGTTTGAGGACAAGCATTTTAAGCTTCGGACTGAGTATAGGGTTATTGGTGAACTCATGAATCGTCTTAAAGTGGTTACTGAGCAAAAGGATAGGTTTATTCTGCAGCATAAGCTTAATAGGGCTTTGAGATTGGTGCAGTGGAAGGAAGCTTATGATCCTGATAACCCTGCCAATTACGGTCTCATTCAGCAAGAACAAGGGGGGCCCAATATGGATACCTTGGAACAATCTGGATTTGAAAAGGAGGATAAACCTGCTCAAGGAGATGAAGATGCTGCTGACAACGACGATGAGGAAGAGTTCGATGACATGAAAGAAAAAGACAACATATTATTGGCCAAACTTGATGTTATTGACAAGAGACTTGAGGAGAAGCTAGCTGAACTTGAGTATACATTTGGAAGGAAGGGTAAGGCTCTAGAGGAAGAGATCAAAGATCTTGCAGAGGAGAGAAATGAGTTAACTGAGAAGAAAAGAAGACCACTTTTCCGAAAGGTAGTTTCACACTTGCCTAATTTTCTGATTCGGTGTTGATATTTTTGAATACACTGCTGTTTAAGTTATTATGTATGATACTCAACTTATTTTATATCAAGTTTCAAGTAAGGTTCTTGTAATATAAATAAACTTTTCTCTGCAATCTGCATTTAGCAAATAGGGTATTCAATCCTCGAGTTTTAGCAAGTTAAAATCACAGTTCATTTTAAATGATTTGAAGGGTGGATATACTCTTTTTTTTTTTTTTGACGTTAAAGACAATTTCAATAACCAAAGTCTGGCAACAAATCAAATGCCAAGACTGTAGAAATACAAAGCGGAGTTTCTTCTACCCATATGCAATCTAAATTCTTAAGAGCATATTTAGCTAAATAATGAGCAGCTTGGTTGGCTTCACGCCTAACATGCAAAAAATTTAAACTACGAAAACTACCCTTAAAACTAATACAATCTCGAATAATAGAGCCAACATAGTTGGAAGATTGTTGGTGATCATTCAACGCTAAAACCACATTAGAAGCATCTGATTCTGCGATAAGATTCAGAAAAGACATGTCTTTTGCAAATTCCAAACCCTTCCGCATAGCTAAAGCTTCTGCAACCTCTGAATCTGGTAATGAACAAACTTGCCAACAACTAGCACCAACGACAACACCTTCATTATCTCTCACCACAACACCAATACCCCACTTGTCACCCTCTATCGGACCTGCCGCGTCAACATTAAGCTTATAGAAACCACTAAACGGAGGTGTCCAATGAACATCAGATATTGGCATAATTGGACCTCTACTCAGTGTCTCCACTAACATCGTACTAGCACTCTTAAAATTCACAATAGATCTTTGTGCCTTTTGAGTAATGGCAATCACATCAACATCAGTCCCCTCAAAACATTTCTTATTTCTAGCACACCATATCTCATAACACAAGACCAAAACATGGATTATAATATCCTCATCGACATCAATAATATTTTTCTCTAACCACTTATGAAAAGGAACATGCCTGAATTCATGCGAATCAAATACCACCCCTAAAGAGGAAGCAAACCATATCTGCTTTGACCAATGACATTCCATAAAGAGATGTGAAATTGTCTCATTATGTTCCCCACAAAGAACACACAGTGGGTCACTGCTTATTCCTCTTTTAAACAAAGGGTGGATATACTCTTACTTTCTCACCTTAGGCTTTGTTTGGGAGTTTGGAGGGGAGGGGAAGGAAGGGCTTTGGGGGTGGGAAAAATAGAGGGAATTTCATACTTTTTTGAAAGAGTGTTTTTTTAGAGAATGATAAACTAATGTTTATGATTCATATATTTTTAATATTAATAATATTATAACAACATAGAATAAATTTGAAGAATTCATATAAACCCTTCAACCCCCCCTCCAATACAACTTTTTAGTTCCCCCAAATGAAGAGGGTTTTATATTATGAAGAAAAATTAACCCCCCAAAGCCCTCCCCTCCCAATGTACTCTATTTCTTCCACTTGCTCCTTCCTTTTTTCCAAAACCCTCCCTTTGGTCCCAATTATAAGTGAAAAAAAGGAAGGGTTTTGGGGGAACAAACTTAATACTTCCTTTGGTCCCAATTATAAAAGGCTACTGGTTTTGTGAATTTTCTAGTTTGTTTTTTGTTTGAATATCACATTGATTTTGATTGAGTTTATACAAATTTGAATACCTTGTCCTTTGGAAAATTTCTTCTTTTTCTTTTATCAAACACAAATAAAAGCATTTTTGTAGGTTAGAATTTTAATGTTCCATATGTGGTGCACTTTTATTGTACCCGTGTCTATACTTGTTTGTAAATTCTCCCATATTCTTGTTTTTGCTTTATTTAAATCCCACTTACCATTTTTATGTTTTTTTTTTTTTTGGTTAAATAATCGTTTTGGTTGTTGTATATGGTTCCAGGGTTTTGATGTAAAATTGATAGATGTGAACCGAACTTGTAAAGTCACAAAGGTAATCTACAAATCTGTCCTTCCATCTATGTTTTTCCCACTTGCTCTCATATTTTCTTAGGTTGTTTCAATTCTCATGATCTAGGGAGGACAAATTTTTAAGTATACTGCTATGTTAGCATGTGGCAACTATAATGGTGTTGTTGGTTTTGCAAAAGCCAAAGGCCCTAAAGCTCCAGATGCTCTCAATAAGGTACCAGCAATATCTTATTAAGTCTTTCTTCAAGTCATGCTTAAGTTGGTTTGACACTAATTTTTTTTTTTAATTGTCATGTGTTCAACATAGAAAATGTTTGCATTTTCACCACCCACCATAAGAGATATGGATCTATTTTTGTTTCATTTTCCAATAGTTGCAAGCTTATTAACCTATTGATTCATGTTTTTCTGAGATTTGTATTGGCAGCTATATTGGGCACTGTTCTTTGGCCAATTATGTGATGATAGATTGATATAGGTTATGGTTAGTCATTGAGATATTTGGTTCATAATTGGTGTGAGGATCTGGAGCTGGTGACTGTGACACCTGTTCTCTCACTGGAATTGCATAATAGAAAACATCTGGCATTATGATTTATTACACAAAACCTTATCCATGTCTTATGCATTGCACGCAAATTTCTTCAATCTTTCTTCTGTTTCAACAAGCTGAAACTAAATCAGTTATTTTCCTTGGCTGATTATTATAAATTGTATCCTAAAAATTTCCACTTTTCATCTTTTTATTATTCATAACTCGAGTTACAGAAGGTGTATTAACTGGTTTTCTATCTATTCTAACCAGCAGGTTTTATTTACATTTCAACTATGTAATTTAATAACTTTTTCAGAATGAATTGACAGGAATTTTTAATCACCAAGTATGAAATCTGATTTTGACCAATGTTTTAAATTTGGTGTATTCTTGAGAATTTTGGCTTCTAAAATCATTGCCAAAATATAAAGTTTCAGCAAATGTTTATGTTTTTGTCTTAAAATAAACCCATGTGCATCATGTTTAATGCAGTTTGACGTCTTAGAGTTTTGAACTTTAATATCATATTGAAATAATGGTTTATTTGAATATAATCAGGCATATGAGAAGTGCTTTCAGAATTTGCATTATGTAGAGCGACACGAGGAGCACACAATTGCGCATGCAATACAAACATCTTATAAAAAGACCAAGGTAGTAAAATCTGTATCCTTCTTCTACCAGTAATTGCCCGTTTATATCATAGAGTTTCTTTCAGCTATGAAAGAAAAGAAAATTAAGTATTTTGTTTTACTTGTCTCAAATGAGTAAGGAACGAGGATATGCTGCCTGCGTTTATCCTGTATGTCTTATGCTTGTCATTATTTTTACTTGTCATCTGTATAATTCGATAGGTGTATCTCTGGCCTGCTTCCACTGCAACTGGCATGAAGGCCGGCAGAATAGTCCAAACCATACTACATTTAGCTGGTTTTAAGAATGTCAAGTCAAAGGTAACTGACTGACCAAAAAAAGCTGAAGATGGTCCTGCAATTTTAGTGTTTGCTCTAATTTTTTTTTTTTTTTTGTCTTCATAGGTTGTTGGTAGCAGAAATCCTCATAATACAGTTAAGGCTGTCTTCAAAGCGCTTAATGCGGTTAGTAACTCAACTTGCAGATGTTGTAATGCCAGTATTTCAATAAATTTTTGCCTATGACATTTTAGCTGATATTGCTTGTTTGTTCCAGATTGAAACGCCAAAGGATGTCCAAGAGAAGTTTGGCCGAACTGTGGTCGAGAAGTATTTGTTGTGA

Protein sequence

>MS.gene70218.t1

MGYIQYGRHGFRKILRSAIATNVFRNSIRSPLGYAATTLPSCSRFHGKSLYSTTSDARIVMELLKEVEKDRLREKNERLRAGLDTADIDAETEDGYDYMGVSSLIEKLEKEKLKETSELNRYEEPTDSDSDDEEDLDANQKKVDDFERKFRRHEEMIQNFTEADTLDDAYKWMQKIDKFEDKHFKLRTEYRVIGELMNRLKVVTEQKDRFILQHKLNRALRLVQWKEAYDPDNPANYGLIQQEQGGPNMDTLEQSGFEKEDKPAQGDEDAADNDDEEEFDDMKEKDNILLAKLDVIDKRLEEKLAELEYTFGRKGKALEEEIKDLAEERNELTEKKRRPLFRKGFDVKLIDVNRTCKVTKGGQIFKYTAMLACGNYNGVVGFAKAKGPKAPDALNKAYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPASTATGMKAGRIVQTILHLAGFKNVKSKVVGSRNPHNTVKAVFKALNAIETPKDVQEKFGRTVVEKYLL