Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71840.t1 | XP_013470189.2 | 96.7 | 362 | 12 | 0 | 1 | 362 | 1 | 362 | 6.00E-217 | 763.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71840.t1 | Q9ZV89 | 51.2 | 334 | 142 | 9 | 38 | 356 | 32 | 359 | 5.3e-97 | 355.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71840.t1 | A0A072VR06 | 96.9 | 350 | 11 | 0 | 13 | 362 | 1 | 350 | 3.9e-210 | 740.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene71840 | 0.806038 | 9.99E-50 | -1.69E-46 |
MS.gene050355 | MS.gene71840 | 0.80091 | 1.15E-48 | -1.69E-46 |
MS.gene050559 | MS.gene71840 | 0.805876 | 1.08E-49 | -1.69E-46 |
MS.gene050561 | MS.gene71840 | 0.801032 | 1.09E-48 | -1.69E-46 |
MS.gene051744 | MS.gene71840 | 0.804167 | 2.46E-49 | -1.69E-46 |
MS.gene05365 | MS.gene71840 | 0.81662 | 5.03E-52 | -1.69E-46 |
MS.gene054124 | MS.gene71840 | 0.803033 | 4.23E-49 | -1.69E-46 |
MS.gene05415 | MS.gene71840 | 0.808339 | 3.25E-50 | -1.69E-46 |
MS.gene05423 | MS.gene71840 | 0.808356 | 3.22E-50 | -1.69E-46 |
MS.gene056162 | MS.gene71840 | 0.826852 | 2.16E-54 | -1.69E-46 |
MS.gene056174 | MS.gene71840 | 0.844475 | 7.39E-59 | -1.69E-46 |
MS.gene057208 | MS.gene71840 | 0.800459 | 1.43E-48 | -1.69E-46 |
MS.gene057598 | MS.gene71840 | 0.812475 | 4.16E-51 | -1.69E-46 |
MS.gene060521 | MS.gene71840 | 0.809031 | 2.31E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene47540 | MS.gene71840 | PPI |
MS.gene39564 | MS.gene71840 | PPI |
MS.gene31379 | MS.gene71840 | PPI |
MS.gene97825 | MS.gene71840 | PPI |
MS.gene72457 | MS.gene71840 | PPI |
MS.gene008708 | MS.gene71840 | PPI |
MS.gene006674 | MS.gene71840 | PPI |
MS.gene26592 | MS.gene71840 | PPI |
MS.gene008707 | MS.gene71840 | PPI |
MS.gene54859 | MS.gene71840 | PPI |
MS.gene39565 | MS.gene71840 | PPI |
MS.gene47537 | MS.gene71840 | PPI |
MS.gene031625 | MS.gene71840 | PPI |
MS.gene26591 | MS.gene71840 | PPI |
MS.gene039341 | MS.gene71840 | PPI |
MS.gene043504 | MS.gene71840 | PPI |
MS.gene045508 | MS.gene71840 | PPI |
MS.gene028817 | MS.gene71840 | PPI |
MS.gene73821 | MS.gene71840 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71840.t1 | MTR_1g111010 | 96.857 | 350 | 11 | 0 | 13 | 362 | 1 | 350 | 0.0 | 714 |
MS.gene71840.t1 | MTR_2g073500 | 64.000 | 350 | 114 | 5 | 13 | 354 | 1 | 346 | 1.55e-162 | 459 |
MS.gene71840.t1 | MTR_2g073510 | 47.207 | 358 | 165 | 9 | 15 | 353 | 1 | 353 | 4.51e-110 | 325 |
MS.gene71840.t1 | MTR_3g049330 | 48.138 | 349 | 158 | 10 | 22 | 354 | 10 | 351 | 5.67e-107 | 318 |
MS.gene71840.t1 | MTR_2g015720 | 48.780 | 328 | 149 | 10 | 39 | 353 | 37 | 358 | 2.58e-100 | 301 |
MS.gene71840.t1 | MTR_4g088030 | 45.584 | 351 | 170 | 11 | 17 | 354 | 9 | 351 | 3.15e-99 | 298 |
MS.gene71840.t1 | MTR_4g087730 | 46.429 | 336 | 162 | 10 | 32 | 354 | 33 | 363 | 8.18e-97 | 292 |
MS.gene71840.t1 | MTR_3g021060 | 45.045 | 333 | 163 | 9 | 35 | 353 | 37 | 363 | 5.26e-95 | 288 |
MS.gene71840.t1 | MTR_5g034810 | 45.783 | 332 | 160 | 10 | 39 | 356 | 30 | 355 | 9.03e-94 | 284 |
MS.gene71840.t1 | MTR_2g091175 | 46.526 | 331 | 152 | 11 | 41 | 355 | 47 | 368 | 1.76e-93 | 284 |
MS.gene71840.t1 | MTR_3g035830 | 44.510 | 337 | 167 | 9 | 31 | 353 | 18 | 348 | 2.60e-93 | 283 |
MS.gene71840.t1 | MTR_3g021090 | 45.210 | 334 | 161 | 10 | 31 | 349 | 18 | 344 | 4.45e-92 | 281 |
MS.gene71840.t1 | MTR_4g079700 | 45.732 | 328 | 155 | 10 | 41 | 353 | 44 | 363 | 1.95e-91 | 278 |
MS.gene71840.t1 | MTR_3g464570 | 41.329 | 346 | 169 | 11 | 39 | 354 | 36 | 377 | 6.12e-85 | 262 |
MS.gene71840.t1 | MTR_5g071350 | 41.341 | 358 | 169 | 11 | 34 | 354 | 47 | 400 | 2.11e-83 | 259 |
MS.gene71840.t1 | MTR_4g121560 | 39.884 | 346 | 170 | 11 | 43 | 354 | 113 | 454 | 1.97e-78 | 248 |
MS.gene71840.t1 | MTR_1g050448 | 39.759 | 332 | 175 | 10 | 41 | 353 | 50 | 375 | 1.16e-77 | 243 |
MS.gene71840.t1 | MTR_7g093450 | 38.682 | 349 | 178 | 12 | 43 | 358 | 247 | 592 | 1.60e-77 | 249 |
MS.gene71840.t1 | MTR_1g112210 | 40.361 | 332 | 172 | 12 | 42 | 353 | 57 | 382 | 5.77e-77 | 242 |
MS.gene71840.t1 | MTR_0136s0010 | 39.420 | 345 | 173 | 12 | 43 | 354 | 169 | 510 | 6.26e-77 | 246 |
MS.gene71840.t1 | MTR_1g112210 | 39.759 | 332 | 161 | 12 | 42 | 353 | 57 | 369 | 3.32e-75 | 237 |
MS.gene71840.t1 | MTR_7g109550 | 39.759 | 332 | 171 | 11 | 44 | 350 | 137 | 464 | 4.97e-75 | 239 |
MS.gene71840.t1 | MTR_4g016940 | 36.127 | 346 | 185 | 10 | 42 | 353 | 84 | 427 | 1.32e-70 | 227 |
MS.gene71840.t1 | MTR_5g033800 | 36.311 | 347 | 182 | 11 | 42 | 354 | 143 | 484 | 2.41e-70 | 228 |
MS.gene71840.t1 | MTR_8g069790 | 36.416 | 346 | 181 | 11 | 43 | 354 | 177 | 517 | 1.60e-69 | 227 |
MS.gene71840.t1 | MTR_4g126950 | 36.888 | 347 | 185 | 12 | 42 | 357 | 107 | 450 | 4.69e-69 | 224 |
MS.gene71840.t1 | MTR_5g059400 | 38.261 | 345 | 176 | 11 | 44 | 354 | 175 | 516 | 1.78e-68 | 224 |
MS.gene71840.t1 | MTR_1g116130 | 38.261 | 345 | 176 | 11 | 44 | 354 | 175 | 516 | 1.78e-68 | 224 |
MS.gene71840.t1 | MTR_8g463790 | 33.333 | 345 | 195 | 9 | 44 | 356 | 71 | 412 | 8.62e-67 | 217 |
MS.gene71840.t1 | MTR_3g090120 | 36.364 | 341 | 188 | 12 | 39 | 354 | 124 | 460 | 2.88e-66 | 217 |
MS.gene71840.t1 | MTR_7g094750 | 37.006 | 354 | 185 | 13 | 41 | 359 | 88 | 438 | 5.35e-65 | 213 |
MS.gene71840.t1 | MTR_3g070900 | 35.429 | 350 | 188 | 10 | 42 | 355 | 104 | 451 | 1.12e-64 | 212 |
MS.gene71840.t1 | MTR_4g014430 | 34.682 | 346 | 193 | 8 | 39 | 353 | 103 | 446 | 2.95e-64 | 211 |
MS.gene71840.t1 | MTR_7g068920 | 34.670 | 349 | 188 | 10 | 41 | 353 | 77 | 421 | 3.21e-64 | 210 |
MS.gene71840.t1 | MTR_2g022560 | 38.150 | 346 | 175 | 12 | 44 | 354 | 97 | 438 | 1.33e-61 | 204 |
MS.gene71840.t1 | MTR_3g071650 | 35.143 | 350 | 181 | 11 | 44 | 354 | 89 | 431 | 7.98e-61 | 201 |
MS.gene71840.t1 | MTR_1g058380 | 34.043 | 376 | 205 | 14 | 17 | 358 | 33 | 399 | 1.17e-60 | 201 |
MS.gene71840.t1 | MTR_8g093530 | 36.391 | 338 | 182 | 13 | 42 | 354 | 88 | 417 | 2.06e-60 | 201 |
MS.gene71840.t1 | MTR_4g014440 | 31.868 | 364 | 206 | 10 | 30 | 354 | 48 | 408 | 2.57e-60 | 199 |
MS.gene71840.t1 | MTR_5g082880 | 33.994 | 353 | 192 | 11 | 42 | 355 | 163 | 513 | 3.06e-58 | 197 |
MS.gene71840.t1 | MTR_3g464570 | 38.971 | 272 | 136 | 8 | 111 | 354 | 4 | 273 | 1.08e-57 | 189 |
MS.gene71840.t1 | MTR_5g083260 | 33.333 | 345 | 194 | 10 | 44 | 354 | 83 | 425 | 2.50e-56 | 190 |
MS.gene71840.t1 | MTR_7g070060 | 30.899 | 356 | 204 | 10 | 39 | 355 | 59 | 411 | 1.45e-55 | 187 |
MS.gene71840.t1 | MTR_5g033800 | 36.515 | 241 | 132 | 6 | 42 | 266 | 143 | 378 | 8.93e-51 | 174 |
MS.gene71840.t1 | MTR_7g094750 | 35.537 | 242 | 137 | 7 | 41 | 266 | 88 | 326 | 9.30e-44 | 154 |
MS.gene71840.t1 | MTR_7g070060 | 31.535 | 241 | 154 | 5 | 41 | 271 | 61 | 300 | 1.86e-39 | 142 |
MS.gene71840.t1 | MTR_1g076690 | 31.044 | 364 | 181 | 15 | 44 | 353 | 223 | 570 | 5.12e-37 | 140 |
MS.gene71840.t1 | MTR_7g070060 | 28.065 | 310 | 181 | 10 | 86 | 355 | 2 | 309 | 3.90e-36 | 133 |
MS.gene71840.t1 | MTR_6g061710 | 27.793 | 367 | 189 | 14 | 44 | 353 | 167 | 514 | 3.69e-34 | 132 |
MS.gene71840.t1 | MTR_4g092830 | 28.011 | 357 | 200 | 15 | 44 | 354 | 48 | 393 | 8.89e-33 | 127 |
MS.gene71840.t1 | MTR_6g016875 | 27.528 | 356 | 211 | 12 | 39 | 353 | 59 | 408 | 1.54e-31 | 123 |
MS.gene71840.t1 | MTR_5g035090 | 28.409 | 352 | 211 | 12 | 40 | 353 | 79 | 427 | 2.13e-31 | 123 |
MS.gene71840.t1 | MTR_2g016060 | 29.444 | 360 | 189 | 18 | 45 | 353 | 56 | 401 | 9.17e-31 | 121 |
MS.gene71840.t1 | MTR_6g016880 | 27.966 | 354 | 203 | 13 | 42 | 353 | 76 | 419 | 1.16e-30 | 121 |
MS.gene71840.t1 | MTR_8g093870 | 28.490 | 351 | 203 | 13 | 42 | 353 | 131 | 472 | 4.94e-30 | 120 |
MS.gene71840.t1 | MTR_5g035150 | 28.142 | 366 | 212 | 15 | 32 | 353 | 73 | 431 | 5.06e-28 | 114 |
MS.gene71840.t1 | MTR_6g007777 | 27.374 | 358 | 218 | 13 | 33 | 353 | 105 | 457 | 6.18e-28 | 114 |
MS.gene71840.t1 | MTR_5g069320 | 32.090 | 268 | 123 | 10 | 101 | 346 | 156 | 386 | 9.49e-28 | 112 |
MS.gene71840.t1 | MTR_7g019120 | 27.733 | 375 | 215 | 15 | 23 | 353 | 58 | 420 | 6.07e-27 | 111 |
MS.gene71840.t1 | MTR_6g016240 | 25.648 | 347 | 214 | 11 | 43 | 349 | 70 | 412 | 8.23e-27 | 110 |
MS.gene71840.t1 | MTR_3g109840 | 27.778 | 360 | 209 | 15 | 44 | 361 | 73 | 423 | 1.19e-26 | 110 |
MS.gene71840.t1 | MTR_8g027900 | 27.321 | 377 | 217 | 17 | 25 | 354 | 190 | 556 | 2.73e-26 | 110 |
MS.gene71840.t1 | MTR_7g033230 | 28.333 | 360 | 210 | 12 | 42 | 359 | 262 | 615 | 5.60e-25 | 106 |
MS.gene71840.t1 | MTR_7g033230 | 28.333 | 360 | 210 | 12 | 42 | 359 | 332 | 685 | 1.36e-24 | 105 |
MS.gene71840.t1 | MTR_4g125060 | 27.066 | 351 | 208 | 12 | 42 | 353 | 130 | 471 | 6.32e-24 | 102 |
MS.gene71840.t1 | MTR_5g035070 | 27.401 | 354 | 206 | 15 | 44 | 353 | 87 | 433 | 1.05e-23 | 102 |
MS.gene71840.t1 | MTR_4g125060 | 27.066 | 351 | 208 | 12 | 42 | 353 | 169 | 510 | 1.30e-23 | 102 |
MS.gene71840.t1 | MTR_7g019140 | 42.478 | 113 | 63 | 2 | 23 | 135 | 58 | 168 | 1.66e-23 | 95.9 |
MS.gene71840.t1 | MTR_4g125060 | 27.066 | 351 | 208 | 12 | 42 | 353 | 198 | 539 | 1.78e-23 | 102 |
MS.gene71840.t1 | MTR_8g104970 | 27.654 | 358 | 207 | 13 | 40 | 353 | 116 | 465 | 1.96e-23 | 101 |
MS.gene71840.t1 | MTR_8g099300 | 25.281 | 356 | 216 | 14 | 43 | 355 | 73 | 421 | 4.04e-22 | 97.1 |
MS.gene71840.t1 | MTR_5g035080 | 42.727 | 110 | 55 | 3 | 31 | 134 | 56 | 163 | 2.10e-20 | 92.4 |
MS.gene71840.t1 | MTR_3g021150 | 40.952 | 105 | 51 | 2 | 229 | 322 | 1 | 105 | 2.04e-19 | 83.2 |
MS.gene71840.t1 | MTR_5g035120 | 44.211 | 95 | 51 | 2 | 40 | 134 | 71 | 163 | 2.63e-19 | 84.7 |
MS.gene71840.t1 | MTR_2g022580 | 34.188 | 117 | 64 | 5 | 106 | 209 | 2 | 118 | 3.09e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71840.t1 | AT1G78710 | 51.205 | 332 | 141 | 9 | 38 | 354 | 32 | 357 | 4.30e-116 | 341 |
MS.gene71840.t1 | AT2G30900 | 47.706 | 327 | 152 | 8 | 44 | 354 | 43 | 366 | 9.69e-103 | 307 |
MS.gene71840.t1 | AT1G29050 | 46.341 | 328 | 156 | 11 | 40 | 353 | 57 | 378 | 7.84e-96 | 290 |
MS.gene71840.t1 | AT2G34070 | 46.769 | 325 | 152 | 10 | 44 | 353 | 65 | 383 | 1.29e-95 | 290 |
MS.gene71840.t1 | AT3G14850 | 45.921 | 331 | 156 | 10 | 41 | 354 | 31 | 355 | 1.74e-94 | 286 |
MS.gene71840.t1 | AT2G42570 | 46.246 | 333 | 157 | 10 | 39 | 356 | 42 | 367 | 9.42e-94 | 285 |
MS.gene71840.t1 | AT2G31110 | 45.399 | 326 | 156 | 11 | 43 | 353 | 44 | 362 | 7.50e-91 | 277 |
MS.gene71840.t1 | AT1G78710 | 44.582 | 323 | 123 | 9 | 38 | 354 | 25 | 297 | 9.43e-89 | 269 |
MS.gene71840.t1 | AT3G54260 | 43.544 | 333 | 162 | 11 | 44 | 356 | 51 | 377 | 2.43e-82 | 256 |
MS.gene71840.t1 | AT5G58600 | 42.105 | 342 | 161 | 12 | 44 | 354 | 66 | 401 | 1.17e-80 | 252 |
MS.gene71840.t1 | AT2G30010 | 41.737 | 357 | 163 | 13 | 36 | 354 | 48 | 397 | 2.47e-80 | 251 |
MS.gene71840.t1 | AT2G30010 | 41.737 | 357 | 163 | 13 | 36 | 354 | 91 | 440 | 8.34e-80 | 251 |
MS.gene71840.t1 | AT3G62390 | 41.471 | 340 | 169 | 12 | 42 | 354 | 136 | 472 | 4.75e-79 | 250 |
MS.gene71840.t1 | AT5G49340 | 38.506 | 348 | 172 | 10 | 44 | 354 | 100 | 442 | 1.88e-78 | 248 |
MS.gene71840.t1 | AT2G30900 | 52.252 | 222 | 99 | 6 | 44 | 261 | 43 | 261 | 2.72e-74 | 231 |
MS.gene71840.t1 | AT3G12060 | 38.150 | 346 | 178 | 11 | 42 | 354 | 194 | 536 | 2.53e-72 | 235 |
MS.gene71840.t1 | AT5G20590 | 39.003 | 341 | 177 | 14 | 44 | 354 | 141 | 480 | 1.58e-71 | 231 |
MS.gene71840.t1 | AT5G06700 | 36.994 | 346 | 182 | 13 | 42 | 354 | 253 | 595 | 9.23e-71 | 232 |
MS.gene71840.t1 | AT5G01360 | 35.159 | 347 | 188 | 9 | 42 | 353 | 34 | 378 | 2.19e-70 | 225 |
MS.gene71840.t1 | AT5G01360 | 35.159 | 347 | 188 | 9 | 42 | 353 | 90 | 434 | 1.11e-69 | 224 |
MS.gene71840.t1 | AT1G60790 | 36.752 | 351 | 179 | 11 | 42 | 354 | 188 | 533 | 2.55e-69 | 227 |
MS.gene71840.t1 | AT2G31110 | 47.845 | 232 | 111 | 8 | 43 | 271 | 44 | 268 | 3.04e-68 | 216 |
MS.gene71840.t1 | AT1G73140 | 33.623 | 345 | 194 | 9 | 42 | 354 | 65 | 406 | 2.89e-67 | 218 |
MS.gene71840.t1 | AT1G48880 | 37.685 | 337 | 183 | 11 | 39 | 354 | 110 | 440 | 2.20e-66 | 216 |
MS.gene71840.t1 | AT2G34070 | 44.664 | 253 | 121 | 8 | 116 | 353 | 1 | 249 | 8.95e-65 | 206 |
MS.gene71840.t1 | AT3G55990 | 35.143 | 350 | 189 | 9 | 42 | 355 | 138 | 485 | 1.13e-63 | 211 |
MS.gene71840.t1 | AT5G06230 | 35.754 | 358 | 184 | 12 | 41 | 358 | 18 | 369 | 3.81e-62 | 203 |
MS.gene71840.t1 | AT5G19160 | 37.535 | 357 | 177 | 16 | 44 | 359 | 99 | 450 | 3.90e-62 | 206 |
MS.gene71840.t1 | AT3G14850 | 44.048 | 252 | 120 | 8 | 116 | 350 | 1 | 248 | 4.02e-62 | 199 |
MS.gene71840.t1 | AT5G06230 | 35.754 | 358 | 184 | 12 | 41 | 358 | 59 | 410 | 8.13e-62 | 204 |
MS.gene71840.t1 | AT3G06080 | 37.536 | 349 | 181 | 14 | 44 | 357 | 103 | 449 | 6.05e-61 | 203 |
MS.gene71840.t1 | AT2G40160 | 34.819 | 359 | 175 | 12 | 44 | 354 | 77 | 424 | 2.22e-60 | 201 |
MS.gene71840.t1 | AT2G40160 | 34.746 | 354 | 172 | 12 | 44 | 349 | 77 | 419 | 9.56e-60 | 199 |
MS.gene71840.t1 | AT5G01620 | 32.394 | 355 | 200 | 11 | 34 | 353 | 100 | 449 | 1.38e-59 | 199 |
MS.gene71840.t1 | AT5G01620 | 32.394 | 355 | 200 | 11 | 34 | 353 | 100 | 449 | 1.38e-59 | 199 |
MS.gene71840.t1 | AT5G01620 | 32.394 | 355 | 200 | 11 | 34 | 353 | 108 | 457 | 2.08e-59 | 199 |
MS.gene71840.t1 | AT2G40320 | 33.524 | 349 | 192 | 11 | 42 | 354 | 79 | 423 | 2.77e-57 | 192 |
MS.gene71840.t1 | AT3G11570 | 36.420 | 324 | 174 | 11 | 66 | 358 | 102 | 424 | 3.58e-57 | 192 |
MS.gene71840.t1 | AT2G40150 | 32.773 | 357 | 196 | 11 | 43 | 357 | 70 | 424 | 4.26e-57 | 192 |
MS.gene71840.t1 | AT2G38320 | 32.955 | 352 | 196 | 12 | 41 | 354 | 56 | 405 | 6.47e-56 | 188 |
MS.gene71840.t1 | AT3G11030 | 33.621 | 348 | 194 | 11 | 42 | 354 | 104 | 449 | 1.53e-55 | 188 |
MS.gene71840.t1 | AT5G58600 | 44.298 | 228 | 118 | 8 | 44 | 266 | 66 | 289 | 1.71e-55 | 184 |
MS.gene71840.t1 | AT3G62390 | 41.057 | 246 | 128 | 7 | 42 | 273 | 136 | 378 | 2.39e-55 | 187 |
MS.gene71840.t1 | AT5G20590 | 39.241 | 237 | 129 | 8 | 44 | 266 | 141 | 376 | 1.40e-51 | 176 |
MS.gene71840.t1 | AT2G38320 | 32.177 | 317 | 176 | 11 | 76 | 354 | 7 | 322 | 3.77e-46 | 160 |
MS.gene71840.t1 | AT2G40160 | 36.475 | 244 | 124 | 6 | 44 | 266 | 77 | 310 | 2.20e-45 | 158 |
MS.gene71840.t1 | AT5G19160 | 39.076 | 238 | 128 | 8 | 44 | 266 | 99 | 334 | 3.05e-45 | 159 |
MS.gene71840.t1 | AT2G31110 | 41.905 | 210 | 103 | 7 | 159 | 353 | 9 | 214 | 3.38e-44 | 152 |
MS.gene71840.t1 | AT3G06080 | 39.496 | 238 | 127 | 9 | 44 | 266 | 103 | 338 | 1.66e-43 | 154 |
MS.gene71840.t1 | AT5G06230 | 35.060 | 251 | 132 | 8 | 41 | 266 | 59 | 303 | 1.05e-40 | 145 |
MS.gene71840.t1 | AT5G64470 | 28.857 | 350 | 205 | 12 | 44 | 356 | 55 | 397 | 1.20e-35 | 134 |
MS.gene71840.t1 | AT3G28150 | 30.286 | 350 | 197 | 11 | 43 | 353 | 69 | 410 | 2.08e-35 | 134 |
MS.gene71840.t1 | AT5G64470 | 28.652 | 356 | 204 | 13 | 44 | 356 | 55 | 403 | 4.94e-35 | 132 |
MS.gene71840.t1 | AT4G25360 | 29.640 | 361 | 194 | 14 | 43 | 353 | 174 | 524 | 1.10e-34 | 134 |
MS.gene71840.t1 | AT4G25360 | 29.640 | 361 | 194 | 14 | 43 | 353 | 174 | 524 | 1.10e-34 | 134 |
MS.gene71840.t1 | AT5G51640 | 28.809 | 361 | 198 | 13 | 43 | 353 | 137 | 488 | 1.19e-34 | 133 |
MS.gene71840.t1 | AT2G14530 | 28.652 | 356 | 203 | 11 | 41 | 353 | 59 | 406 | 2.12e-34 | 131 |
MS.gene71840.t1 | AT1G70230 | 29.155 | 343 | 200 | 16 | 44 | 353 | 79 | 411 | 8.53e-32 | 124 |
MS.gene71840.t1 | AT1G01430 | 28.689 | 366 | 210 | 14 | 41 | 361 | 96 | 455 | 6.23e-31 | 122 |
MS.gene71840.t1 | AT4G01080 | 28.011 | 357 | 211 | 14 | 39 | 357 | 86 | 434 | 5.71e-29 | 117 |
MS.gene71840.t1 | AT3G02440 | 28.531 | 354 | 197 | 15 | 44 | 353 | 127 | 468 | 8.37e-28 | 114 |
MS.gene71840.t1 | AT3G02440 | 28.531 | 354 | 197 | 15 | 44 | 353 | 135 | 476 | 9.96e-28 | 114 |
MS.gene71840.t1 | AT2G37720 | 27.171 | 357 | 216 | 13 | 34 | 353 | 133 | 482 | 3.59e-27 | 112 |
MS.gene71840.t1 | AT5G15900 | 28.771 | 358 | 192 | 16 | 44 | 353 | 86 | 428 | 1.81e-26 | 109 |
MS.gene71840.t1 | AT5G15900 | 28.771 | 358 | 192 | 16 | 44 | 353 | 67 | 409 | 1.86e-26 | 109 |
MS.gene71840.t1 | AT5G20680 | 26.404 | 356 | 204 | 14 | 42 | 353 | 116 | 457 | 1.40e-25 | 107 |
MS.gene71840.t1 | AT5G20680 | 26.816 | 358 | 200 | 15 | 42 | 353 | 210 | 551 | 1.55e-25 | 108 |
MS.gene71840.t1 | AT5G20680 | 26.816 | 358 | 200 | 15 | 42 | 353 | 210 | 551 | 1.55e-25 | 108 |
MS.gene71840.t1 | AT5G20680 | 26.816 | 358 | 200 | 15 | 42 | 353 | 210 | 551 | 1.55e-25 | 108 |
MS.gene71840.t1 | AT5G20680 | 26.816 | 358 | 200 | 15 | 42 | 353 | 210 | 551 | 1.55e-25 | 108 |
MS.gene71840.t1 | AT5G20680 | 26.816 | 358 | 200 | 15 | 42 | 353 | 192 | 533 | 1.64e-25 | 107 |
MS.gene71840.t1 | AT5G64020 | 27.528 | 356 | 208 | 13 | 44 | 353 | 57 | 408 | 4.50e-25 | 105 |
MS.gene71840.t1 | AT5G15890 | 27.841 | 352 | 200 | 13 | 42 | 353 | 185 | 522 | 5.07e-25 | 106 |
MS.gene71840.t1 | AT4G11090 | 24.722 | 360 | 226 | 11 | 39 | 357 | 74 | 429 | 1.08e-23 | 102 |
MS.gene71840.t1 | AT4G23790 | 26.593 | 361 | 216 | 12 | 39 | 355 | 74 | 429 | 5.92e-23 | 99.8 |
MS.gene71840.t1 | AT5G64470 | 28.395 | 243 | 149 | 9 | 44 | 266 | 55 | 292 | 9.99e-21 | 92.0 |
MS.gene71840.t1 | AT5G64470 | 28.395 | 243 | 149 | 9 | 44 | 266 | 55 | 292 | 1.13e-20 | 92.0 |
Find 78 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTTCTATGTTCAGATTTC+TGG | 0.137068 | 1.3:+75700468 | MS.gene71840:CDS |
CACACACATTCGTTCTTCTA+TGG | 0.191029 | 1.3:+75699775 | MS.gene71840:CDS |
GGTTAACCACTTGGTCTAAT+TGG | 0.192861 | 1.3:+75701125 | MS.gene71840:CDS |
ACATGAAAAGTCATGTTTAT+TGG | 0.227466 | 1.3:+75701823 | MS.gene71840:CDS |
TCAAATCCCTGCACTATAAA+AGG | 0.249740 | 1.3:-75699909 | None:intergenic |
GGAATTGCTGCTGCACATTC+AGG | 0.255467 | 1.3:+75701193 | MS.gene71840:CDS |
GTAAAGGTGTAATTTGATTC+TGG | 0.257863 | 1.3:-75700430 | None:intergenic |
CAAACAATCATGGTTTGGTT+TGG | 0.329748 | 1.3:+75699699 | None:intergenic |
AACATTGAAGCTTACAAGAT+TGG | 0.344348 | 1.3:+75701103 | MS.gene71840:CDS |
AAGACTACTGTTATCTTTCA+AGG | 0.351212 | 1.3:+75701172 | MS.gene71840:CDS |
CCTCGACCAGTGAATATAGA+AGG | 0.368131 | 1.3:-75701888 | None:intergenic |
GCATCATAAAGAGGGTAGTA+TGG | 0.369410 | 1.3:-75699873 | None:intergenic |
GTTTGATGGTGTGAAATTCT+TGG | 0.383916 | 1.3:+75700315 | MS.gene71840:CDS |
AAGATTATCTCAAATATAGA+TGG | 0.394741 | 1.3:+75699958 | MS.gene71840:CDS |
GCTGGCTTTGATCCTTCCTC+TGG | 0.398684 | 1.3:-75701762 | None:intergenic |
AATGGCAAACAATCATGGTT+TGG | 0.409245 | 1.3:+75699694 | None:intergenic |
AAGAATGTGATCTTTCTAAA+GGG | 0.412927 | 1.3:+75699832 | MS.gene71840:CDS |
TGGTTAATTAACAGGTTTGA+TGG | 0.414245 | 1.3:+75700301 | MS.gene71840:intron |
ACATTGAAGCTTACAAGATT+GGG | 0.421501 | 1.3:+75701104 | MS.gene71840:CDS |
AAAGATAACAGTAGTCTTTG+AGG | 0.421554 | 1.3:-75701167 | None:intergenic |
TGCAGTCACTGGTGTCTAGC+TGG | 0.427585 | 1.3:+75701927 | MS.gene71840:CDS |
AACATTTCATTCCAAGTGTC+GGG | 0.442071 | 1.3:-75701954 | None:intergenic |
CAAACACAACTGCGGATAGA+TGG | 0.442377 | 1.3:+75701861 | MS.gene71840:CDS |
TGATCTTTCTAAAGGGGAAT+GGG | 0.444301 | 1.3:+75699839 | MS.gene71840:CDS |
GGATTTGATTGTCTCAGAAA+TGG | 0.453425 | 1.3:+75699924 | MS.gene71840:CDS |
CAAGAATGTGATCTTTCTAA+AGG | 0.455361 | 1.3:+75699831 | MS.gene71840:CDS |
TCAATAGTGTGGGTGAAAGA+TGG | 0.461620 | 1.3:+75700606 | MS.gene71840:CDS |
TAGCTGGTGCTCCCGACACT+TGG | 0.461664 | 1.3:+75701943 | MS.gene71840:CDS |
TATTTGAGATAATCTTGATC+TGG | 0.461942 | 1.3:-75699951 | None:intergenic |
TACGGTTCGTGATAGAGAAA+AGG | 0.466498 | 1.3:+75700641 | MS.gene71840:CDS |
GTGATCTTTCTAAAGGGGAA+TGG | 0.466637 | 1.3:+75699838 | MS.gene71840:CDS |
CTTGGAAGATCACATGCAAA+AGG | 0.466690 | 1.3:-75699984 | None:intergenic |
GAATTGCTGCTGCACATTCA+GGG | 0.500253 | 1.3:+75701194 | MS.gene71840:CDS |
ACACACATTCGTTCTTCTAT+GGG | 0.503042 | 1.3:+75699776 | MS.gene71840:CDS |
GGATCAAAGCCAGCATATCC+TGG | 0.505064 | 1.3:+75701771 | MS.gene71840:CDS |
ACAAGATTGGGTTAACCACT+TGG | 0.507566 | 1.3:+75701116 | MS.gene71840:CDS |
CAATAGTGTGGGTGAAAGAT+GGG | 0.508616 | 1.3:+75700607 | MS.gene71840:CDS |
AAGATAACAGTAGTCTTTGA+GGG | 0.513061 | 1.3:-75701166 | None:intergenic |
AAGACAATATCAAATGACAT+TGG | 0.532659 | 1.3:+75699731 | MS.gene71840:CDS |
ACTCTATAAGCGACAATATG+TGG | 0.533074 | 1.3:+75700374 | MS.gene71840:CDS |
CAACATTTCATTCCAAGTGT+CGG | 0.533298 | 1.3:-75701955 | None:intergenic |
CCACTTGTACCGAGATGAAA+CGG | 0.534358 | 1.3:-75700685 | None:intergenic |
TCCCTTGAGGCATCATAAAG+AGG | 0.534577 | 1.3:-75699882 | None:intergenic |
ATGTCTACACCAGGATATGC+TGG | 0.536979 | 1.3:-75701780 | None:intergenic |
AGTATGAAGTTTCAATAGTG+TGG | 0.537445 | 1.3:+75700595 | MS.gene71840:CDS |
TGGTCGAGGAACTTCTTATG+AGG | 0.538598 | 1.3:+75701902 | MS.gene71840:CDS |
ACGGTTCGTGATAGAGAAAA+GGG | 0.539431 | 1.3:+75700642 | MS.gene71840:CDS |
AACTTGACTCCGTTTCATCT+CGG | 0.548645 | 1.3:+75700676 | MS.gene71840:CDS |
CCCTCTTTATGATGCCTCAA+GGG | 0.550562 | 1.3:+75699881 | MS.gene71840:CDS |
TGTGTGAAACCACCAATGAT+AGG | 0.556830 | 1.3:-75700733 | None:intergenic |
CTTATGAGGACTGCAGTCAC+TGG | 0.559215 | 1.3:+75701916 | MS.gene71840:CDS |
ATCAATCCAATTAGACCAAG+TGG | 0.559355 | 1.3:-75701131 | None:intergenic |
AGATGGGTACCTAGTGGATA+CGG | 0.563975 | 1.3:+75700623 | MS.gene71840:CDS |
GGTCACCCTTCTATATTCAC+TGG | 0.564907 | 1.3:+75701882 | MS.gene71840:CDS |
CCGTTTCATCTCGGTACAAG+TGG | 0.575787 | 1.3:+75700685 | MS.gene71840:CDS |
ACCCTCTTTATGATGCCTCA+AGG | 0.586390 | 1.3:+75699880 | MS.gene71840:CDS |
CCTTCTATATTCACTGGTCG+AGG | 0.587820 | 1.3:+75701888 | MS.gene71840:CDS |
TCATCTCGGTACAAGTGGAA+TGG | 0.589411 | 1.3:+75700690 | MS.gene71840:CDS |
GTATGAAGTTTCAATAGTGT+GGG | 0.591688 | 1.3:+75700596 | MS.gene71840:CDS |
ATTCGTTCTTCTATGGGCAG+TGG | 0.593313 | 1.3:+75699782 | MS.gene71840:CDS |
AGAATGTGATCTTTCTAAAG+GGG | 0.601354 | 1.3:+75699833 | MS.gene71840:CDS |
AAATGAGATAATGAAAGACA+TGG | 0.606612 | 1.3:+75701078 | MS.gene71840:CDS |
CCCTTGAGGCATCATAAAGA+GGG | 0.607432 | 1.3:-75699881 | None:intergenic |
GAACAAACTAAGCCAGAGGA+AGG | 0.612792 | 1.3:+75701750 | MS.gene71840:CDS |
CTCGACCAGTGAATATAGAA+GGG | 0.620624 | 1.3:-75701887 | None:intergenic |
TTCTGAACAATGTCTACACC+AGG | 0.627751 | 1.3:-75701789 | None:intergenic |
GCATGCACATAGTACAGTGT+AGG | 0.634677 | 1.3:-75699807 | None:intergenic |
TATCACGAACCGTATCCACT+AGG | 0.636942 | 1.3:-75700632 | None:intergenic |
CATCCACAGACACTTTCAAG+TGG | 0.640996 | 1.3:+75701054 | MS.gene71840:intron |
TATCATTGGTGGTTTCACAC+AGG | 0.651059 | 1.3:+75700735 | MS.gene71840:CDS |
ATCCACAGACACTTTCAAGT+GGG | 0.658544 | 1.3:+75701055 | MS.gene71840:intron |
TTACTTTACAAACACAACTG+CGG | 0.678864 | 1.3:+75701853 | MS.gene71840:CDS |
TCTGGAACAAACTAAGCCAG+AGG | 0.698183 | 1.3:+75701746 | MS.gene71840:CDS |
TATAAAAGGACAGTCCCTTG+AGG | 0.699934 | 1.3:-75699895 | None:intergenic |
AAATTCTTGGAGACATACCG+AGG | 0.705651 | 1.3:+75700328 | MS.gene71840:CDS |
CATAGAAGAACGAATGTGTG+TGG | 0.724411 | 1.3:-75699774 | None:intergenic |
AATTCTTGGAGACATACCGA+GGG | 0.724500 | 1.3:+75700329 | MS.gene71840:CDS |
GGTGAAAGATGGGTACCTAG+TGG | 0.748513 | 1.3:+75700617 | MS.gene71840:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAATGGTATATTTACA+AGG | - | chr1.3:75701361-75701380 | None:intergenic | 15.0% |
!! | TCTTCTCATTTAAAAAAAAA+TGG | - | chr1.3:75701374-75701393 | None:intergenic | 15.0% |
!!! | AAATTTGTTCATATTGAAAT+TGG | - | chr1.3:75700223-75700242 | None:intergenic | 15.0% |
!!! | AGTTAGTTTTTTCTTATTAT+TGG | + | chr1.3:75700894-75700913 | MS.gene71840:intron | 15.0% |
!!! | ATTTTCCTTTAATTTAAGAT+TGG | - | chr1.3:75700509-75700528 | None:intergenic | 15.0% |
!!! | CAAACATTTTACATATTATA+AGG | - | chr1.3:75700158-75700177 | None:intergenic | 15.0% |
!!! | GATGCAATATTTATTTTTAT+TGG | + | chr1.3:75700125-75700144 | MS.gene71840:intron | 15.0% |
!!! | GTGAATTTTATAGTTAAAAT+GGG | - | chr1.3:75701682-75701701 | None:intergenic | 15.0% |
!!! | TGTGAATTTTATAGTTAAAA+TGG | - | chr1.3:75701683-75701702 | None:intergenic | 15.0% |
!!! | TTATTTTAGTCTTAATTTAG+TGG | - | chr1.3:75700190-75700209 | None:intergenic | 15.0% |
!! | AACTTATCAAACAATTATCA+AGG | - | chr1.3:75700538-75700557 | None:intergenic | 20.0% |
!! | AAGATTATCTCAAATATAGA+TGG | + | chr1.3:75699958-75699977 | MS.gene71840:CDS | 20.0% |
!! | AATTGTTTGATAAGTTATCT+TGG | + | chr1.3:75700542-75700561 | MS.gene71840:intron | 20.0% |
!! | ACAAGAATCAAATGTAAAAA+CGG | + | chr1.3:75701546-75701565 | MS.gene71840:intron | 20.0% |
!! | TCAACTAATACAAAATAACA+AGG | - | chr1.3:75700107-75700126 | None:intergenic | 20.0% |
!! | TGAAACTATTATTATTACCT+TGG | - | chr1.3:75700005-75700024 | None:intergenic | 20.0% |
!!! | AATGCTTCATAAATTTTCAA+GGG | + | chr1.3:75701713-75701732 | MS.gene71840:intron | 20.0% |
!!! | AATTTTAATCCTTACTTTGA+TGG | + | chr1.3:75701469-75701488 | MS.gene71840:intron | 20.0% |
!!! | TAATGCTTCATAAATTTTCA+AGG | + | chr1.3:75701712-75701731 | MS.gene71840:intron | 20.0% |
!!! | TATACAATTAGTTTTGTCTT+AGG | - | chr1.3:75700267-75700286 | None:intergenic | 20.0% |
!!! | TATATAACAAATTTTGCAAG+AGG | + | chr1.3:75701509-75701528 | MS.gene71840:intron | 20.0% |
!!! | TATTTAAAATTAGGAAAGAG+TGG | - | chr1.3:75700041-75700060 | None:intergenic | 20.0% |
!!! | TTTTTCTTATTATTGGCTAT+AGG | + | chr1.3:75700901-75700920 | MS.gene71840:intron | 20.0% |
! | AAATGAGATAATGAAAGACA+TGG | + | chr1.3:75701078-75701097 | MS.gene71840:CDS | 25.0% |
! | AAGAATGTGATCTTTCTAAA+GGG | + | chr1.3:75699832-75699851 | MS.gene71840:CDS | 25.0% |
! | AAGACAATATCAAATGACAT+TGG | + | chr1.3:75699731-75699750 | MS.gene71840:CDS | 25.0% |
! | ACATGAAAAGTCATGTTTAT+TGG | + | chr1.3:75701823-75701842 | MS.gene71840:CDS | 25.0% |
! | CAACTCCAATCTTAAATTAA+AGG | + | chr1.3:75700501-75700520 | MS.gene71840:intron | 25.0% |
! | GAGAGAGTTATTAGAATATA+AGG | + | chr1.3:75700860-75700879 | MS.gene71840:intron | 25.0% |
! | GCTAAAAAACTTTAGTACAT+TGG | - | chr1.3:75700768-75700787 | None:intergenic | 25.0% |
!! | AGTTTGTTCTTCTTATCATT+CGG | - | chr1.3:75700937-75700956 | None:intergenic | 25.0% |
!! | TATTTGAGATAATCTTGATC+TGG | - | chr1.3:75699954-75699973 | None:intergenic | 25.0% |
!! | TGATTTTCAATACCTATCAT+TGG | + | chr1.3:75700721-75700740 | MS.gene71840:CDS | 25.0% |
!!! | ATGTTTTGTTAGTCTTGTAA+AGG | - | chr1.3:75700449-75700468 | None:intergenic | 25.0% |
!!! | CTACGTTTTGATTTTGATTT+TGG | + | chr1.3:75700080-75700099 | MS.gene71840:intron | 25.0% |
!!! | GATTTTAATCCATCAAAGTA+AGG | - | chr1.3:75701481-75701500 | None:intergenic | 25.0% |
AAAGATAACAGTAGTCTTTG+AGG | - | chr1.3:75701170-75701189 | None:intergenic | 30.0% | |
AACATTGAAGCTTACAAGAT+TGG | + | chr1.3:75701103-75701122 | MS.gene71840:CDS | 30.0% | |
AAGACTACTGTTATCTTTCA+AGG | + | chr1.3:75701172-75701191 | MS.gene71840:CDS | 30.0% | |
AAGATAACAGTAGTCTTTGA+GGG | - | chr1.3:75701169-75701188 | None:intergenic | 30.0% | |
AATAAGAGAATTGAGGTTTG+TGG | + | chr1.3:75701005-75701024 | MS.gene71840:intron | 30.0% | |
ACATTGAAGCTTACAAGATT+GGG | + | chr1.3:75701104-75701123 | MS.gene71840:CDS | 30.0% | |
ACTTCTCAATAAGAGAATTG+AGG | + | chr1.3:75700998-75701017 | MS.gene71840:intron | 30.0% | |
AGTATGAAGTTTCAATAGTG+TGG | + | chr1.3:75700595-75700614 | MS.gene71840:CDS | 30.0% | |
CAAGAATGTGATCTTTCTAA+AGG | + | chr1.3:75699831-75699850 | MS.gene71840:CDS | 30.0% | |
GGAAAAAGATCATGTTTGTT+GGG | + | chr1.3:75700350-75700369 | MS.gene71840:CDS | 30.0% | |
GTATGAAGTTTCAATAGTGT+GGG | + | chr1.3:75700596-75700615 | MS.gene71840:CDS | 30.0% | |
TCTTTCTATGTTCAGATTTC+TGG | + | chr1.3:75700468-75700487 | MS.gene71840:CDS | 30.0% | |
TGGTTAATTAACAGGTTTGA+TGG | + | chr1.3:75700301-75700320 | MS.gene71840:intron | 30.0% | |
TGTATATTTGCAAGTGATGT+TGG | + | chr1.3:75700281-75700300 | MS.gene71840:intron | 30.0% | |
TTACTTTACAAACACAACTG+CGG | + | chr1.3:75701853-75701872 | MS.gene71840:CDS | 30.0% | |
! | AGAATGTGATCTTTCTAAAG+GGG | + | chr1.3:75699833-75699852 | MS.gene71840:CDS | 30.0% |
! | AGTGATGTTGGTTAATTAAC+AGG | + | chr1.3:75700293-75700312 | MS.gene71840:intron | 30.0% |
! | GAAAAAGATCATGTTTGTTG+GGG | + | chr1.3:75700351-75700370 | MS.gene71840:CDS | 30.0% |
! | GTAAAGGTGTAATTTGATTC+TGG | - | chr1.3:75700433-75700452 | None:intergenic | 30.0% |
! | TTTTCAATACCTATCATTGG+TGG | + | chr1.3:75700724-75700743 | MS.gene71840:CDS | 30.0% |
!!! | ATGTTGTATGCTGTTTTACT+AGG | + | chr1.3:75701972-75701991 | MS.gene71840:CDS | 30.0% |
AACATTTCATTCCAAGTGTC+GGG | - | chr1.3:75701957-75701976 | None:intergenic | 35.0% | |
AACTAACCAAAAGCAAACAG+TGG | - | chr1.3:75701399-75701418 | None:intergenic | 35.0% | |
ACACACATTCGTTCTTCTAT+GGG | + | chr1.3:75699776-75699795 | MS.gene71840:CDS | 35.0% | |
ACTCTATAAGCGACAATATG+TGG | + | chr1.3:75700374-75700393 | MS.gene71840:CDS | 35.0% | |
ATCAATCCAATTAGACCAAG+TGG | - | chr1.3:75701134-75701153 | None:intergenic | 35.0% | |
CAACATTTCATTCCAAGTGT+CGG | - | chr1.3:75701958-75701977 | None:intergenic | 35.0% | |
GAATTGAGGTTTGTGGATAT+TGG | + | chr1.3:75701012-75701031 | MS.gene71840:intron | 35.0% | |
GGATTTGATTGTCTCAGAAA+TGG | + | chr1.3:75699924-75699943 | MS.gene71840:CDS | 35.0% | |
GGGAAAAAGATCATGTTTGT+TGG | + | chr1.3:75700349-75700368 | MS.gene71840:CDS | 35.0% | |
GTCGCATTATTATGTGTTAC+AGG | + | chr1.3:75700572-75700591 | MS.gene71840:intron | 35.0% | |
TCAAATCCCTGCACTATAAA+AGG | - | chr1.3:75699912-75699931 | None:intergenic | 35.0% | |
! | AAGAAACCACTGTTTGCTTT+TGG | + | chr1.3:75701390-75701409 | MS.gene71840:intron | 35.0% |
! | CAAACATGATCTTTTTCCCT+CGG | - | chr1.3:75700348-75700367 | None:intergenic | 35.0% |
! | CAATATGACCAACTTTTGCA+TGG | - | chr1.3:75701435-75701454 | None:intergenic | 35.0% |
! | TGATCTTTCTAAAGGGGAAT+GGG | + | chr1.3:75699839-75699858 | MS.gene71840:CDS | 35.0% |
!! | GTTTGATGGTGTGAAATTCT+TGG | + | chr1.3:75700315-75700334 | MS.gene71840:CDS | 35.0% |
!! | GTTTTAGTCCATGCAAAAGT+TGG | + | chr1.3:75701424-75701443 | MS.gene71840:intron | 35.0% |
AAATTCTTGGAGACATACCG+AGG | + | chr1.3:75700328-75700347 | MS.gene71840:CDS | 40.0% | |
AACTTGACTCCGTTTCATCT+CGG | + | chr1.3:75700676-75700695 | MS.gene71840:CDS | 40.0% | |
AATTAGGAAAGAGTGGAGAG+TGG | - | chr1.3:75700034-75700053 | None:intergenic | 40.0% | |
AATTCTTGGAGACATACCGA+GGG | + | chr1.3:75700329-75700348 | MS.gene71840:CDS | 40.0% | |
ACAAGATTGGGTTAACCACT+TGG | + | chr1.3:75701116-75701135 | MS.gene71840:CDS | 40.0% | |
ACGGTTCGTGATAGAGAAAA+GGG | + | chr1.3:75700642-75700661 | MS.gene71840:CDS | 40.0% | |
CAATAGTGTGGGTGAAAGAT+GGG | + | chr1.3:75700607-75700626 | MS.gene71840:CDS | 40.0% | |
CACACACATTCGTTCTTCTA+TGG | + | chr1.3:75699775-75699794 | MS.gene71840:CDS | 40.0% | |
CATAGAAGAACGAATGTGTG+TGG | - | chr1.3:75699777-75699796 | None:intergenic | 40.0% | |
CTCGACCAGTGAATATAGAA+GGG | - | chr1.3:75701890-75701909 | None:intergenic | 40.0% | |
CTTGGAAGATCACATGCAAA+AGG | - | chr1.3:75699987-75700006 | None:intergenic | 40.0% | |
GCATCATAAAGAGGGTAGTA+TGG | - | chr1.3:75699876-75699895 | None:intergenic | 40.0% | |
GGTTAACCACTTGGTCTAAT+TGG | + | chr1.3:75701125-75701144 | MS.gene71840:CDS | 40.0% | |
TACGGTTCGTGATAGAGAAA+AGG | + | chr1.3:75700641-75700660 | MS.gene71840:CDS | 40.0% | |
TATAAAAGGACAGTCCCTTG+AGG | - | chr1.3:75699898-75699917 | None:intergenic | 40.0% | |
TCAATAGTGTGGGTGAAAGA+TGG | + | chr1.3:75700606-75700625 | MS.gene71840:CDS | 40.0% | |
TGTGTGAAACCACCAATGAT+AGG | - | chr1.3:75700736-75700755 | None:intergenic | 40.0% | |
TTCAAGGGAAAAACACTGTC+TGG | + | chr1.3:75701728-75701747 | MS.gene71840:intron | 40.0% | |
TTCTGAACAATGTCTACACC+AGG | - | chr1.3:75701792-75701811 | None:intergenic | 40.0% | |
! | ATCCACAGACACTTTCAAGT+GGG | + | chr1.3:75701055-75701074 | MS.gene71840:intron | 40.0% |
! | CTTTTGCATGTGATCTTCCA+AGG | + | chr1.3:75699985-75700004 | MS.gene71840:CDS | 40.0% |
! | GACTGTCCTTTTATAGTGCA+GGG | + | chr1.3:75699903-75699922 | MS.gene71840:CDS | 40.0% |
! | GTGATCTTTCTAAAGGGGAA+TGG | + | chr1.3:75699838-75699857 | MS.gene71840:CDS | 40.0% |
! | TATCATTGGTGGTTTCACAC+AGG | + | chr1.3:75700735-75700754 | MS.gene71840:CDS | 40.0% |
ACCCTCTTTATGATGCCTCA+AGG | + | chr1.3:75699880-75699899 | MS.gene71840:CDS | 45.0% | |
ATGTCTACACCAGGATATGC+TGG | - | chr1.3:75701783-75701802 | None:intergenic | 45.0% | |
ATTCGTTCTTCTATGGGCAG+TGG | + | chr1.3:75699782-75699801 | MS.gene71840:CDS | 45.0% | |
CAAACACAACTGCGGATAGA+TGG | + | chr1.3:75701861-75701880 | MS.gene71840:CDS | 45.0% | |
CATCCACAGACACTTTCAAG+TGG | + | chr1.3:75701054-75701073 | MS.gene71840:intron | 45.0% | |
CCACTTGTACCGAGATGAAA+CGG | - | chr1.3:75700688-75700707 | None:intergenic | 45.0% | |
CCCTCTTTATGATGCCTCAA+GGG | + | chr1.3:75699881-75699900 | MS.gene71840:CDS | 45.0% | |
CCTCGACCAGTGAATATAGA+AGG | - | chr1.3:75701891-75701910 | None:intergenic | 45.0% | |
CCTTCTATATTCACTGGTCG+AGG | + | chr1.3:75701888-75701907 | MS.gene71840:CDS | 45.0% | |
GAACAAACTAAGCCAGAGGA+AGG | + | chr1.3:75701750-75701769 | MS.gene71840:CDS | 45.0% | |
GAATTGCTGCTGCACATTCA+GGG | + | chr1.3:75701194-75701213 | MS.gene71840:CDS | 45.0% | |
GCATGCACATAGTACAGTGT+AGG | - | chr1.3:75699810-75699829 | None:intergenic | 45.0% | |
GGTCACCCTTCTATATTCAC+TGG | + | chr1.3:75701882-75701901 | MS.gene71840:CDS | 45.0% | |
TATCACGAACCGTATCCACT+AGG | - | chr1.3:75700635-75700654 | None:intergenic | 45.0% | |
TCATCTCGGTACAAGTGGAA+TGG | + | chr1.3:75700690-75700709 | MS.gene71840:CDS | 45.0% | |
TGGTCGAGGAACTTCTTATG+AGG | + | chr1.3:75701902-75701921 | MS.gene71840:CDS | 45.0% | |
! | AGATGGGTACCTAGTGGATA+CGG | + | chr1.3:75700623-75700642 | MS.gene71840:CDS | 45.0% |
! | CCCTTGAGGCATCATAAAGA+GGG | - | chr1.3:75699884-75699903 | None:intergenic | 45.0% |
! | GGACTGTCCTTTTATAGTGC+AGG | + | chr1.3:75699902-75699921 | MS.gene71840:CDS | 45.0% |
! | TCCCTTGAGGCATCATAAAG+AGG | - | chr1.3:75699885-75699904 | None:intergenic | 45.0% |
! | TCTGGAACAAACTAAGCCAG+AGG | + | chr1.3:75701746-75701765 | MS.gene71840:CDS | 45.0% |
!! | TTCCCACTTGAAAGTGTCTG+TGG | - | chr1.3:75701060-75701079 | None:intergenic | 45.0% |
!! | AATAAAAAATGATATATTTA+TGG | - | chr1.3:75701284-75701303 | None:intergenic | 5.0% |
!! | ATAAAAAATGATATATTTAT+GGG | - | chr1.3:75701283-75701302 | None:intergenic | 5.0% |
!!! | ATTTAAATATGTTTTTTTTT+TGG | + | chr1.3:75701231-75701250 | MS.gene71840:intron | 5.0% |
!!! | TAAAAATCATATTTAAAATT+AGG | - | chr1.3:75700050-75700069 | None:intergenic | 5.0% |
CCGTTTCATCTCGGTACAAG+TGG | + | chr1.3:75700685-75700704 | MS.gene71840:CDS | 50.0% | |
CTTATGAGGACTGCAGTCAC+TGG | + | chr1.3:75701916-75701935 | MS.gene71840:CDS | 50.0% | |
GGAATTGCTGCTGCACATTC+AGG | + | chr1.3:75701193-75701212 | MS.gene71840:CDS | 50.0% | |
GGATCAAAGCCAGCATATCC+TGG | + | chr1.3:75701771-75701790 | MS.gene71840:CDS | 50.0% | |
GGTGAAAGATGGGTACCTAG+TGG | + | chr1.3:75700617-75700636 | MS.gene71840:CDS | 50.0% | |
TGCAGTCACTGGTGTCTAGC+TGG | + | chr1.3:75701927-75701946 | MS.gene71840:CDS | 55.0% | |
!! | GCTGGCTTTGATCCTTCCTC+TGG | - | chr1.3:75701765-75701784 | None:intergenic | 55.0% |
TAGCTGGTGCTCCCGACACT+TGG | + | chr1.3:75701943-75701962 | MS.gene71840:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 75699708 | 75702019 | 75699708 | ID=MS.gene71840 |
chr1.3 | mRNA | 75699708 | 75702019 | 75699708 | ID=MS.gene71840.t1;Parent=MS.gene71840 |
chr1.3 | exon | 75699708 | 75700006 | 75699708 | ID=MS.gene71840.t1.exon1;Parent=MS.gene71840.t1 |
chr1.3 | CDS | 75699708 | 75700006 | 75699708 | ID=cds.MS.gene71840.t1;Parent=MS.gene71840.t1 |
chr1.3 | exon | 75700315 | 75700489 | 75700315 | ID=MS.gene71840.t1.exon2;Parent=MS.gene71840.t1 |
chr1.3 | CDS | 75700315 | 75700489 | 75700315 | ID=cds.MS.gene71840.t1;Parent=MS.gene71840.t1 |
chr1.3 | exon | 75700594 | 75700769 | 75700594 | ID=MS.gene71840.t1.exon3;Parent=MS.gene71840.t1 |
chr1.3 | CDS | 75700594 | 75700769 | 75700594 | ID=cds.MS.gene71840.t1;Parent=MS.gene71840.t1 |
chr1.3 | exon | 75701063 | 75701215 | 75701063 | ID=MS.gene71840.t1.exon4;Parent=MS.gene71840.t1 |
chr1.3 | CDS | 75701063 | 75701215 | 75701063 | ID=cds.MS.gene71840.t1;Parent=MS.gene71840.t1 |
chr1.3 | exon | 75701734 | 75702019 | 75701734 | ID=MS.gene71840.t1.exon5;Parent=MS.gene71840.t1 |
chr1.3 | CDS | 75701734 | 75702019 | 75701734 | ID=cds.MS.gene71840.t1;Parent=MS.gene71840.t1 |
Gene Sequence |
Protein sequence |