AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74017


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74017.t1 MTR_5g059130 93.651 315 19 1 1 315 23 336 0.0 612
MS.gene74017.t1 MTR_5g059140 83.596 317 49 3 1 315 21 336 0.0 521
MS.gene74017.t1 MTR_3g072820 76.752 314 72 1 2 315 22 334 0.0 515
MS.gene74017.t1 MTR_3g072810 49.841 315 153 4 2 315 21 331 1.70e-98 293
MS.gene74017.t1 MTR_5g011250 42.617 298 162 4 21 310 46 342 2.44e-79 245
MS.gene74017.t1 MTR_7g062580 36.825 315 189 6 2 312 35 343 3.85e-66 212
MS.gene74017.t1 MTR_7g068650 36.709 316 185 7 2 305 30 342 1.32e-64 208
MS.gene74017.t1 MTR_7g063730 36.190 315 191 6 2 312 44 352 8.48e-63 203
MS.gene74017.t1 MTR_3g091360 37.755 294 170 4 22 309 52 338 1.83e-62 202
MS.gene74017.t1 MTR_7g062570 34.713 314 197 5 2 312 35 343 3.69e-62 201
MS.gene74017.t1 MTR_7g062550 35.238 315 194 6 2 312 40 348 7.31e-62 201
MS.gene74017.t1 MTR_7g062600 35.873 315 193 7 2 312 31 340 1.10e-61 200
MS.gene74017.t1 MTR_5g082750 34.084 311 195 5 2 305 29 336 2.34e-60 197
MS.gene74017.t1 MTR_3g070860 34.405 311 194 5 2 305 30 337 1.07e-59 195
MS.gene74017.t1 MTR_3g117420 35.507 276 168 6 20 289 50 321 1.28e-59 194
MS.gene74017.t1 MTR_3g091350 35.906 298 178 5 18 309 55 345 2.18e-59 194
MS.gene74017.t1 MTR_2g437380 36.538 312 183 7 2 305 32 336 2.21e-59 194
MS.gene74017.t1 MTR_4g015790 36.120 299 179 7 20 309 60 355 1.85e-58 192
MS.gene74017.t1 MTR_8g024120 37.061 313 176 7 2 307 22 320 2.50e-58 191
MS.gene74017.t1 MTR_4g116010 37.241 290 172 7 22 307 50 333 5.58e-58 190
MS.gene74017.t1 MTR_8g074070 35.495 293 176 8 20 306 50 335 5.66e-58 190
MS.gene74017.t1 MTR_5g032870 34.405 311 195 5 2 306 19 326 6.02e-58 190
MS.gene74017.t1 MTR_7g102820 34.194 310 182 7 13 306 58 361 2.92e-55 184
MS.gene74017.t1 MTR_3g117485 32.441 299 192 6 20 311 47 342 1.13e-54 182
MS.gene74017.t1 MTR_5g032880 36.082 291 178 4 22 306 376 664 1.30e-54 189
MS.gene74017.t1 MTR_5g032880 35.333 300 179 8 22 314 38 329 2.89e-54 188
MS.gene74017.t1 MTR_3g092890 36.364 308 183 8 2 305 19 317 1.76e-54 181
MS.gene74017.t1 MTR_5g055900 33.779 299 184 7 11 305 40 328 2.81e-54 181
MS.gene74017.t1 MTR_4g093840 33.557 298 183 6 22 311 62 352 3.53e-54 181
MS.gene74017.t1 MTR_8g074050 34.932 292 177 8 20 305 50 334 4.54e-54 180
MS.gene74017.t1 MTR_1g062110 35.000 300 173 8 20 306 64 354 8.91e-54 180
MS.gene74017.t1 MTR_3g117485 33.333 273 178 4 40 311 1 270 1.92e-53 176
MS.gene74017.t1 MTR_5g065010 35.959 292 173 6 22 306 39 323 2.83e-53 178
MS.gene74017.t1 MTR_7g045650 35.878 262 159 5 2 259 40 296 3.46e-53 177
MS.gene74017.t1 MTR_0009s0050 34.256 289 180 6 21 305 46 328 4.36e-53 177
MS.gene74017.t1 MTR_0009s0050 34.256 289 180 6 21 305 46 328 5.27e-53 177
MS.gene74017.t1 MTR_3g063180 32.343 303 192 6 22 314 42 341 7.12e-53 177
MS.gene74017.t1 MTR_1g070085 33.333 288 185 4 22 306 37 320 1.64e-52 176
MS.gene74017.t1 MTR_1g070085 33.333 288 185 4 22 306 37 320 1.64e-52 176
MS.gene74017.t1 MTR_1g070135 32.313 294 191 4 22 312 38 326 1.83e-52 176
MS.gene74017.t1 MTR_5g048570 33.898 295 185 6 15 305 38 326 4.52e-52 175
MS.gene74017.t1 MTR_8g074070 34.812 293 159 9 20 306 50 316 1.50e-51 173
MS.gene74017.t1 MTR_5g055680 32.646 291 182 7 21 305 46 328 3.67e-51 172
MS.gene74017.t1 MTR_5g048470 34.657 277 165 8 21 289 52 320 3.80e-51 173
MS.gene74017.t1 MTR_7g081710 33.871 310 184 8 7 306 34 332 6.32e-51 172
MS.gene74017.t1 MTR_8g075890 34.602 289 177 5 2 283 20 303 2.71e-50 171
MS.gene74017.t1 MTR_1g070120 31.293 294 194 4 22 312 38 326 1.29e-49 168
MS.gene74017.t1 MTR_2g102570 33.673 294 181 7 22 309 52 337 8.74e-49 167
MS.gene74017.t1 MTR_8g064200 32.765 293 182 8 21 306 56 340 8.84e-49 167
MS.gene74017.t1 MTR_8g075830 34.256 289 178 5 2 283 20 303 9.59e-49 167
MS.gene74017.t1 MTR_8g064200 32.765 293 182 8 21 306 51 335 1.21e-48 166
MS.gene74017.t1 MTR_3g058610 34.364 291 175 7 2 283 20 303 2.67e-48 165
MS.gene74017.t1 MTR_5g055820 34.432 273 172 5 42 312 69 336 4.69e-48 164
MS.gene74017.t1 MTR_1g033810 32.903 310 196 7 2 305 27 330 6.64e-48 164
MS.gene74017.t1 MTR_7g102720 35.117 299 173 9 16 306 31 316 1.21e-47 163
MS.gene74017.t1 MTR_3g088565 32.886 298 178 7 20 306 1 287 3.15e-47 161
MS.gene74017.t1 MTR_3g026150 33.221 298 187 6 20 312 58 348 5.91e-47 162
MS.gene74017.t1 MTR_1g034120 31.420 331 198 9 2 309 8 332 1.90e-46 160
MS.gene74017.t1 MTR_5g048550 31.310 313 196 7 2 306 28 329 2.73e-46 160
MS.gene74017.t1 MTR_3g043900 35.540 287 175 6 22 306 56 334 6.94e-46 159
MS.gene74017.t1 MTR_2g437380 36.032 247 151 4 61 305 1 242 7.72e-46 156
MS.gene74017.t1 MTR_1g034140 32.051 312 189 7 2 298 8 311 8.41e-46 158
MS.gene74017.t1 MTR_3g045230 35.274 292 170 8 22 306 56 335 8.68e-46 159
MS.gene74017.t1 MTR_5g022020 32.526 289 183 5 2 283 20 303 1.14e-45 158
MS.gene74017.t1 MTR_1g070080 31.333 300 198 4 10 306 26 320 1.58e-45 157
MS.gene74017.t1 MTR_1g048940 32.624 282 172 7 32 306 60 330 2.94e-45 157
MS.gene74017.t1 MTR_5g048850 30.690 290 191 6 21 306 46 329 4.67e-45 157
MS.gene74017.t1 MTR_0328s0030 31.525 295 192 6 21 311 44 332 6.66e-45 156
MS.gene74017.t1 MTR_2g072910 30.479 292 193 6 20 306 49 335 7.88e-45 156
MS.gene74017.t1 MTR_8g009110 31.633 294 185 6 22 306 60 346 9.12e-45 156
MS.gene74017.t1 MTR_1g034060 30.699 329 203 8 2 309 8 332 9.54e-45 156
MS.gene74017.t1 MTR_4g087090 29.607 331 199 11 2 310 12 330 1.17e-44 155
MS.gene74017.t1 MTR_5g055690 29.592 294 200 5 22 312 47 336 1.99e-44 155
MS.gene74017.t1 MTR_5g048740 31.959 291 187 7 21 306 44 328 4.19e-44 154
MS.gene74017.t1 MTR_2g072890 30.479 292 193 6 20 306 50 336 6.58e-44 154
MS.gene74017.t1 MTR_0009s0050 36.239 218 135 3 89 305 16 230 1.69e-43 150
MS.gene74017.t1 MTR_0009s0050 36.239 218 135 3 89 305 16 230 2.06e-43 150
MS.gene74017.t1 MTR_8g009160 31.633 294 184 6 22 306 60 345 2.29e-43 152
MS.gene74017.t1 MTR_4g115990 32.990 291 169 6 22 311 46 311 3.06e-43 151
MS.gene74017.t1 MTR_7g016090 30.986 284 188 5 2 283 20 297 3.50e-43 151
MS.gene74017.t1 MTR_7g016090 30.986 284 188 5 2 283 22 299 3.83e-43 151
MS.gene74017.t1 MTR_6g015950 30.844 308 201 8 2 305 20 319 8.08e-43 150
MS.gene74017.t1 MTR_2g068840 30.640 297 187 7 21 306 54 342 9.50e-43 151
MS.gene74017.t1 MTR_1g070085 32.927 246 161 3 61 306 1 242 1.34e-42 148
MS.gene74017.t1 MTR_8g009090 31.757 296 179 8 22 305 60 344 4.01e-42 149
MS.gene74017.t1 MTR_2g069210 32.660 297 176 7 22 306 64 348 4.28e-42 149
MS.gene74017.t1 MTR_8g009080 35.452 299 171 11 19 306 91 378 4.67e-42 150
MS.gene74017.t1 MTR_3g083370 32.993 294 181 9 23 310 5 288 9.29e-42 147
MS.gene74017.t1 MTR_0009s0480 30.345 290 192 6 21 306 45 328 1.53e-41 147
MS.gene74017.t1 MTR_2g069190 32.143 308 190 7 7 306 56 352 1.66e-41 148
MS.gene74017.t1 MTR_2g025120 32.646 291 178 9 23 306 5 284 1.68e-41 146
MS.gene74017.t1 MTR_4g087110 33.333 303 175 9 23 306 33 327 2.59e-41 147
MS.gene74017.t1 MTR_8g041620 31.111 315 196 7 1 303 47 352 2.97e-41 147
MS.gene74017.t1 MTR_8g028435 31.208 298 180 7 22 306 60 345 4.26e-41 147
MS.gene74017.t1 MTR_3g026150 34.694 245 154 4 69 312 6 245 5.34e-41 143
MS.gene74017.t1 MTR_4g087140 32.209 326 195 11 2 306 8 328 6.06e-41 146
MS.gene74017.t1 MTR_1g070100 33.195 241 157 3 66 306 2 238 6.22e-41 143
MS.gene74017.t1 MTR_2g069090 32.432 296 179 8 22 306 68 353 8.32e-41 146
MS.gene74017.t1 MTR_5g055800 30.928 291 188 9 21 306 46 328 8.57e-41 145
MS.gene74017.t1 MTR_8g009170 30.612 294 188 6 22 306 60 346 8.87e-41 145
MS.gene74017.t1 MTR_1g011580 32.517 286 181 6 22 306 63 337 1.29e-40 145
MS.gene74017.t1 MTR_1g062110 34.728 239 135 7 20 245 64 294 1.80e-40 144
MS.gene74017.t1 MTR_8g041600 30.094 319 194 8 1 303 47 352 2.45e-40 145
MS.gene74017.t1 MTR_8g008930 30.375 293 188 6 22 305 60 345 3.85e-40 144
MS.gene74017.t1 MTR_7g029655 30.868 311 183 9 18 312 63 357 4.39e-40 144
MS.gene74017.t1 MTR_2g069010 30.547 311 190 10 11 306 58 357 9.15e-40 143
MS.gene74017.t1 MTR_4g087120 30.149 335 199 11 2 311 8 332 9.99e-40 142
MS.gene74017.t1 MTR_4g087100 28.916 332 203 8 2 309 8 330 2.94e-39 141
MS.gene74017.t1 MTR_2g068960 30.671 313 195 10 11 310 52 355 3.34e-39 142
MS.gene74017.t1 MTR_2g069300 30.667 300 179 9 22 306 54 339 4.07e-39 141
MS.gene74017.t1 MTR_7g016080 31.529 314 195 8 6 315 25 322 4.91e-39 140
MS.gene74017.t1 MTR_7g062560 31.847 314 194 8 2 311 42 339 1.70e-38 139
MS.gene74017.t1 MTR_2g068950 30.492 305 190 10 19 310 60 355 3.93e-38 139
MS.gene74017.t1 MTR_4g117880 31.419 296 181 9 22 305 60 345 6.11e-38 138
MS.gene74017.t1 MTR_1g070135 31.278 227 149 3 22 245 38 260 7.41e-38 136
MS.gene74017.t1 MTR_1g081840 30.225 311 192 8 19 315 50 349 1.80e-37 137
MS.gene74017.t1 MTR_5g085330 31.525 295 179 9 20 302 3 286 4.25e-37 135
MS.gene74017.t1 MTR_1g093110 29.568 301 187 7 19 306 67 355 4.84e-37 136
MS.gene74017.t1 MTR_1g102070 30.968 310 191 8 19 315 56 355 5.07e-37 136
MS.gene74017.t1 MTR_6g464620 31.690 284 177 5 19 289 61 340 6.50e-37 136
MS.gene74017.t1 MTR_0032s0040 29.338 317 184 11 9 305 57 353 8.13e-37 135
MS.gene74017.t1 MTR_2g069020 30.000 310 176 9 18 306 63 352 1.09e-36 135
MS.gene74017.t1 MTR_7g451860 32.313 294 177 8 19 305 38 316 1.76e-36 134
MS.gene74017.t1 MTR_7g047670 32.313 294 177 8 19 305 38 316 1.76e-36 134
MS.gene74017.t1 MTR_2g069020 30.000 310 176 9 18 306 63 352 1.94e-36 135
MS.gene74017.t1 MTR_1g070185 29.503 322 190 9 1 306 48 348 2.48e-36 134
MS.gene74017.t1 MTR_6g092620 32.881 295 173 10 20 306 1 278 4.52e-36 132
MS.gene74017.t1 MTR_0056s0160 32.110 218 142 5 91 306 1 214 2.62e-35 128
MS.gene74017.t1 MTR_2g019370 27.273 319 207 10 2 307 12 318 3.07e-35 130
MS.gene74017.t1 MTR_2g083030 29.375 320 201 7 3 315 19 320 4.62e-35 130
MS.gene74017.t1 MTR_5g055690 30.837 227 151 4 22 245 47 270 2.60e-34 126
MS.gene74017.t1 MTR_3g026150 33.766 231 142 5 20 245 58 282 2.86e-34 127
MS.gene74017.t1 MTR_2g072910 31.624 234 151 5 20 248 49 278 4.67e-34 126
MS.gene74017.t1 MTR_3g088745 29.677 310 195 8 19 315 33 332 1.08e-33 127
MS.gene74017.t1 MTR_8g041600 30.350 257 155 6 1 245 47 291 1.26e-33 125
MS.gene74017.t1 MTR_0009s0050 40.397 151 86 3 156 305 1 148 1.30e-33 122
MS.gene74017.t1 MTR_8g062600 27.742 310 203 7 15 312 60 360 1.57e-33 127
MS.gene74017.t1 MTR_8g033380 29.043 303 196 7 2 292 37 332 1.66e-33 127
MS.gene74017.t1 MTR_2g083000 28.956 297 180 7 19 305 30 305 2.74e-33 125
MS.gene74017.t1 MTR_7g105070 30.897 301 185 10 22 309 59 349 5.70e-33 125
MS.gene74017.t1 MTR_3g096500 29.393 313 192 10 19 315 63 362 1.01e-32 125
MS.gene74017.t1 MTR_4g024660 27.974 311 203 7 14 312 59 360 1.16e-32 124
MS.gene74017.t1 MTR_8g461330 27.113 284 179 8 21 288 26 297 2.00e-32 123
MS.gene74017.t1 MTR_5g048850 30.000 230 152 5 21 246 46 270 2.30e-32 121
MS.gene74017.t1 MTR_4g087130 31.596 307 184 9 23 311 33 331 2.64e-32 123
MS.gene74017.t1 MTR_1g093120 28.481 316 197 8 3 306 53 351 2.67e-32 123
MS.gene74017.t1 MTR_2g070870 26.871 294 198 8 21 307 27 310 4.41e-32 122
MS.gene74017.t1 MTR_4g021380 30.795 302 187 11 21 307 6 300 7.19e-32 121
MS.gene74017.t1 MTR_1g093140 28.289 304 188 9 19 306 70 359 8.59e-32 122
MS.gene74017.t1 MTR_5g005570 30.612 294 179 9 19 305 34 309 1.04e-31 121
MS.gene74017.t1 MTR_1g043775 30.247 324 184 14 3 308 42 341 2.39e-31 120
MS.gene74017.t1 MTR_2g069060 29.703 303 177 8 20 305 47 330 2.81e-31 120
MS.gene74017.t1 MTR_4g096840 28.571 294 191 9 22 305 29 313 3.09e-31 120
MS.gene74017.t1 MTR_7g056347 28.296 311 196 10 11 306 56 354 3.16e-31 120
MS.gene74017.t1 MTR_1g043760 29.739 306 187 8 22 312 54 346 3.44e-31 120
MS.gene74017.t1 MTR_8g063070 27.124 306 200 7 20 312 65 360 4.71e-31 120
MS.gene74017.t1 MTR_8g009080 35.897 234 132 8 19 244 91 314 7.53e-31 119
MS.gene74017.t1 MTR_2g033270 29.699 266 167 8 18 275 15 268 1.20e-30 118
MS.gene74017.t1 MTR_8g009080 36.364 231 129 8 19 241 91 311 1.71e-30 118
MS.gene74017.t1 MTR_8g469400 28.435 313 188 8 13 312 58 347 1.86e-30 118
MS.gene74017.t1 MTR_4g123020 29.352 293 187 9 22 305 20 301 2.55e-30 117
MS.gene74017.t1 MTR_1g043810 29.114 316 187 11 4 304 43 336 4.93e-30 117
MS.gene74017.t1 MTR_0009s0400 41.270 126 72 2 182 306 1 125 7.21e-29 108
MS.gene74017.t1 MTR_4g119410 28.616 318 204 9 2 306 47 354 7.78e-29 114
MS.gene74017.t1 MTR_0009s0480 29.258 229 153 5 21 245 45 268 9.24e-29 112
MS.gene74017.t1 MTR_1g086550 29.470 302 187 9 22 305 20 313 9.64e-29 113
MS.gene74017.t1 MTR_1g027290 29.836 305 182 11 21 306 28 319 1.27e-28 113
MS.gene74017.t1 MTR_8g009170 30.131 229 148 4 22 244 60 282 2.00e-28 111
MS.gene74017.t1 MTR_8g006930 30.233 301 187 9 19 306 64 354 4.02e-28 112
MS.gene74017.t1 MTR_8g009150 27.027 296 176 9 22 306 60 326 6.23e-28 111
MS.gene74017.t1 MTR_4g074130 27.532 316 201 10 2 305 15 314 7.80e-28 110
MS.gene74017.t1 MTR_8g009180 34.731 167 103 3 145 308 114 277 8.00e-28 110
MS.gene74017.t1 MTR_2g025120 33.043 230 136 9 23 245 5 223 8.65e-28 108
MS.gene74017.t1 MTR_7g056393 28.302 318 187 9 11 306 56 354 9.22e-28 111
MS.gene74017.t1 MTR_7g078010 30.063 316 180 10 13 306 58 354 1.03e-27 111
MS.gene74017.t1 MTR_3g464530 30.970 268 152 9 22 275 34 282 1.65e-27 109
MS.gene74017.t1 MTR_3g040410 26.182 275 194 3 31 305 22 287 1.74e-27 109
MS.gene74017.t1 MTR_2g068800 28.571 259 142 8 21 265 54 283 2.59e-27 108
MS.gene74017.t1 MTR_8g009120 28.188 298 178 8 22 306 60 334 3.11e-27 109
MS.gene74017.t1 MTR_4g132770 38.816 152 80 4 173 311 11 162 4.18e-27 104
MS.gene74017.t1 MTR_3g083370 31.579 228 142 7 23 245 5 223 7.22e-27 105
MS.gene74017.t1 MTR_1g032140 31.208 298 189 8 21 312 65 352 1.00e-26 108
MS.gene74017.t1 MTR_1g032220 31.379 290 180 8 21 305 72 347 2.72e-26 107
MS.gene74017.t1 MTR_3g108520 25.249 301 210 5 17 306 2 298 4.49e-26 105
MS.gene74017.t1 MTR_1g070110 27.642 246 144 3 61 306 4 215 5.03e-26 103
MS.gene74017.t1 MTR_1g043770 26.936 297 192 8 22 306 53 336 5.90e-26 105
MS.gene74017.t1 MTR_1g032250 30.537 298 179 10 21 306 72 353 1.34e-25 105
MS.gene74017.t1 MTR_8g102600 29.221 308 182 12 24 306 14 310 2.23e-25 103
MS.gene74017.t1 MTR_4g100600 26.471 306 207 8 11 306 3 300 3.27e-24 100
MS.gene74017.t1 MTR_7g077670 29.470 302 179 10 21 306 10 293 5.10e-24 100
MS.gene74017.t1 MTR_2g069060 30.638 235 145 7 19 245 24 248 1.62e-23 97.4
MS.gene74017.t1 MTR_7g056353 38.194 144 85 3 131 273 150 290 1.68e-23 100
MS.gene74017.t1 MTR_8g030880 29.658 263 165 8 20 272 8 260 2.64e-23 98.2
MS.gene74017.t1 MTR_1g043775 30.859 256 140 10 3 244 42 274 7.77e-23 96.7
MS.gene74017.t1 MTR_4g021360 25.658 304 205 9 17 307 2 297 1.32e-22 96.3
MS.gene74017.t1 MTR_8g093930 25.000 308 210 8 19 315 44 341 2.02e-22 96.3
MS.gene74017.t1 MTR_1g027310 25.676 296 168 8 21 308 48 299 1.01e-21 93.6
MS.gene74017.t1 MTR_1g043810 29.249 253 146 8 4 244 43 274 1.03e-21 94.0
MS.gene74017.t1 MTR_4g100590 23.684 304 213 7 11 306 3 295 1.94e-21 92.8
MS.gene74017.t1 MTR_6g088665 29.268 328 202 11 6 311 7 326 3.10e-21 92.8
MS.gene74017.t1 MTR_6g088665 28.875 329 203 10 6 311 7 327 8.84e-21 91.7
MS.gene74017.t1 MTR_8g093980 24.845 322 198 10 16 315 53 352 1.35e-20 91.3
MS.gene74017.t1 MTR_7g078010 30.522 249 139 8 13 245 58 288 1.58e-20 90.1
MS.gene74017.t1 MTR_5g025090 26.846 298 193 8 22 312 5 284 4.42e-20 89.0
MS.gene74017.t1 MTR_3g464530 29.412 238 135 9 22 245 34 252 8.34e-20 87.4
MS.gene74017.t1 MTR_1g043770 27.586 232 147 5 22 244 53 272 8.50e-20 88.2
MS.gene74017.t1 MTR_4g011720 24.354 271 176 6 21 276 8 264 1.09e-18 85.1
MS.gene74017.t1 MTR_8g102600 30.268 261 146 12 71 306 11 260 5.88e-18 82.4
MS.gene74017.t1 MTR_4g011690 25.468 267 179 8 21 276 8 265 6.61e-18 83.2
MS.gene74017.t1 MTR_5g027230 25.517 290 193 8 22 305 6 278 1.11e-16 79.3
MS.gene74017.t1 MTR_6g035160 32.168 143 92 3 169 308 24 164 1.83e-15 73.6
MS.gene74017.t1 MTR_1g043840 28.409 176 109 4 104 272 19 184 7.98e-14 71.6
MS.gene74017.t1 MTR_1g011600 25.704 284 180 9 22 284 8 281 5.10e-13 68.9
MS.gene74017.t1 MTR_7g090520 25.080 311 201 14 11 306 2 295 1.33e-12 67.8
MS.gene74017.t1 MTR_4g100600 25.108 231 157 6 11 231 3 227 1.43e-12 66.6
MS.gene74017.t1 MTR_4g011720 23.605 233 163 6 21 245 8 233 3.11e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74017.t1 AT5G08640 57.508 313 132 1 2 314 23 334 5.87e-138 394
MS.gene74017.t1 AT5G08640 57.508 313 132 1 2 314 23 334 5.87e-138 394
MS.gene74017.t1 AT5G63590 51.042 288 141 0 20 307 12 299 5.32e-111 324
MS.gene74017.t1 AT5G63600 44.147 299 160 3 12 310 23 314 8.12e-95 284
MS.gene74017.t1 AT5G63600 44.000 300 160 4 12 310 23 315 1.15e-93 281
MS.gene74017.t1 AT5G43935 42.953 298 140 5 21 313 18 290 3.04e-87 263
MS.gene74017.t1 AT4G22880 42.953 298 161 5 21 310 46 342 2.75e-79 245
MS.gene74017.t1 AT4G22880 42.953 298 161 5 21 310 46 342 2.75e-79 245
MS.gene74017.t1 AT4G22880 42.953 298 161 5 21 310 46 342 2.75e-79 245
MS.gene74017.t1 AT5G63595 42.966 263 128 2 23 285 26 266 5.00e-75 232
MS.gene74017.t1 AT5G63580 45.778 225 120 2 22 246 19 241 4.99e-65 205
MS.gene74017.t1 AT2G38240 38.127 299 173 6 13 305 39 331 6.49e-65 208
MS.gene74017.t1 AT5G63580 46.396 222 117 2 22 243 19 238 6.96e-65 205
MS.gene74017.t1 AT3G11180 35.370 311 191 5 2 305 71 378 2.70e-62 203
MS.gene74017.t1 AT3G11180 35.370 311 191 5 2 305 71 378 2.74e-62 203
MS.gene74017.t1 AT5G05600 35.514 321 197 5 2 315 42 359 1.10e-61 201
MS.gene74017.t1 AT3G21420 36.909 317 185 6 2 307 32 344 1.48e-61 200
MS.gene74017.t1 AT4G10500 32.686 309 197 5 2 305 24 326 1.10e-59 195
MS.gene74017.t1 AT4G10490 33.758 314 190 8 2 306 22 326 1.11e-58 192
MS.gene74017.t1 AT1G49390 34.797 296 182 6 19 307 42 333 2.15e-58 191
MS.gene74017.t1 AT4G16330 34.106 302 187 6 17 315 62 354 2.30e-58 192
MS.gene74017.t1 AT5G20400 35.354 297 182 6 19 309 42 334 2.55e-58 191
MS.gene74017.t1 AT5G54000 33.910 289 181 6 19 301 43 327 2.61e-55 183
MS.gene74017.t1 AT1G17020 32.278 316 203 5 2 309 33 345 4.43e-55 183
MS.gene74017.t1 AT1G49390 36.434 258 158 5 52 307 1 254 8.85e-54 177
MS.gene74017.t1 AT5G20550 34.915 295 180 9 20 306 43 333 2.77e-53 178
MS.gene74017.t1 AT3G55970 35.294 306 179 6 9 305 46 341 5.54e-53 177
MS.gene74017.t1 AT5G24530 34.304 309 191 7 2 305 19 320 6.50e-53 177
MS.gene74017.t1 AT1G17010 32.881 295 189 5 17 306 49 339 1.45e-52 176
MS.gene74017.t1 AT3G19010 35.577 312 172 10 21 312 27 329 9.06e-52 174
MS.gene74017.t1 AT3G19010 35.577 312 172 10 21 312 27 329 9.06e-52 174
MS.gene74017.t1 AT3G13610 34.375 288 179 6 22 306 62 342 1.07e-51 174
MS.gene74017.t1 AT3G60290 34.700 317 182 12 9 315 44 345 5.42e-50 170
MS.gene74017.t1 AT2G44800 33.784 296 173 7 22 306 52 335 5.66e-50 170
MS.gene74017.t1 AT4G25300 31.633 294 193 4 2 290 32 322 7.84e-50 169
MS.gene74017.t1 AT5G54000 34.661 251 159 4 52 301 1 247 1.41e-49 166
MS.gene74017.t1 AT2G36690 33.898 295 178 8 20 306 59 344 1.41e-49 169
MS.gene74017.t1 AT2G36690 33.898 295 178 8 20 306 59 344 1.41e-49 169
MS.gene74017.t1 AT3G51240 32.872 289 182 5 2 283 19 302 2.91e-49 168
MS.gene74017.t1 AT1G55290 33.218 289 181 6 22 306 62 342 6.51e-49 167
MS.gene74017.t1 AT1G78550 31.447 318 206 7 2 311 33 346 8.11e-49 167
MS.gene74017.t1 AT5G05600 35.060 251 154 4 2 245 42 290 5.47e-48 162
MS.gene74017.t1 AT4G25310 34.191 272 171 5 42 312 76 340 6.51e-48 164
MS.gene74017.t1 AT4G16330 35.294 255 155 5 64 315 1 248 2.76e-47 160
MS.gene74017.t1 AT3G12900 34.722 288 173 8 25 306 59 337 3.03e-47 162
MS.gene74017.t1 AT1G15550 32.877 292 185 6 22 309 57 341 4.61e-46 159
MS.gene74017.t1 AT1G06650 33.333 297 174 10 22 305 64 349 1.55e-45 158
MS.gene74017.t1 AT5G43440 33.439 314 183 9 13 313 53 353 3.02e-45 157
MS.gene74017.t1 AT1G06640 32.558 301 171 11 22 305 64 349 1.92e-44 155
MS.gene74017.t1 AT1G78550 33.333 267 170 5 49 311 6 268 2.71e-44 152
MS.gene74017.t1 AT3G19000 31.935 310 182 7 21 309 31 332 8.26e-44 153
MS.gene74017.t1 AT3G19010 33.333 312 149 10 21 312 27 299 1.58e-43 152
MS.gene74017.t1 AT5G43450 32.680 306 178 9 13 305 52 342 1.75e-42 150
MS.gene74017.t1 AT4G21690 30.233 301 186 8 22 309 47 336 3.66e-42 149
MS.gene74017.t1 AT1G62380 31.399 293 182 8 20 306 5 284 2.46e-41 146
MS.gene74017.t1 AT3G55970 34.959 246 142 5 9 245 46 282 3.35e-41 145
MS.gene74017.t1 AT1G03410 33.677 291 173 10 19 298 91 372 3.46e-41 147
MS.gene74017.t1 AT1G03410 33.677 291 173 10 19 298 54 335 3.65e-41 147
MS.gene74017.t1 AT1G06645 32.095 296 176 10 22 305 77 359 6.14e-41 147
MS.gene74017.t1 AT1G77330 31.023 303 188 7 20 312 1 292 8.02e-41 144
MS.gene74017.t1 AT5G07480 33.000 300 177 10 22 306 44 334 1.17e-40 145
MS.gene74017.t1 AT5G59540 31.773 299 180 8 20 305 59 346 2.57e-40 144
MS.gene74017.t1 AT1G12010 31.757 296 181 11 18 306 3 284 3.06e-40 143
MS.gene74017.t1 AT1G04350 32.119 302 182 10 15 305 51 340 8.31e-40 143
MS.gene74017.t1 AT5G59530 31.438 299 182 9 20 305 56 344 4.16e-39 141
MS.gene74017.t1 AT1G80340 31.208 298 194 6 22 315 50 340 4.89e-39 140
MS.gene74017.t1 AT3G19010 33.460 263 148 8 21 263 27 282 7.81e-39 139
MS.gene74017.t1 AT5G51810 29.642 307 178 6 19 307 60 346 8.79e-39 141
MS.gene74017.t1 AT2G30830 31.270 307 186 10 20 311 52 348 9.24e-39 140
MS.gene74017.t1 AT1G80330 29.967 307 198 8 12 309 39 337 1.92e-38 139
MS.gene74017.t1 AT4G25420 29.154 319 194 8 14 315 53 356 2.55e-38 139
MS.gene74017.t1 AT2G30840 30.132 302 196 8 9 305 51 342 1.63e-37 137
MS.gene74017.t1 AT3G19000 32.283 254 144 6 21 253 31 277 3.24e-37 134
MS.gene74017.t1 AT1G04380 30.743 296 182 10 20 305 43 325 3.72e-37 135
MS.gene74017.t1 AT1G06620 31.894 301 175 9 20 305 60 345 1.09e-36 135
MS.gene74017.t1 AT3G51240 33.784 222 141 3 64 283 1 218 1.21e-36 132
MS.gene74017.t1 AT3G61400 31.475 305 184 11 14 305 59 351 1.42e-36 135
MS.gene74017.t1 AT5G43440 35.102 245 137 6 13 247 53 285 2.95e-36 132
MS.gene74017.t1 AT1G60980 31.338 284 167 6 20 283 55 330 4.07e-36 134
MS.gene74017.t1 AT1G03400 31.849 292 180 9 20 305 54 332 5.81e-36 133
MS.gene74017.t1 AT5G12270 30.241 291 191 4 22 306 56 340 1.86e-35 132
MS.gene74017.t1 AT5G07200 29.032 310 198 5 20 315 56 357 4.14e-35 131
MS.gene74017.t1 AT1G06650 33.333 231 139 5 22 245 64 286 8.16e-35 129
MS.gene74017.t1 AT1G05010 33.212 274 164 10 23 288 5 267 1.36e-34 128
MS.gene74017.t1 AT1G02400 28.889 315 208 9 1 305 1 309 1.46e-34 129
MS.gene74017.t1 AT1G06640 32.645 242 138 7 22 251 64 292 1.79e-34 128
MS.gene74017.t1 AT1G78440 26.578 301 195 10 22 307 18 307 2.59e-34 128
MS.gene74017.t1 AT1G06640 33.051 236 133 7 22 245 64 286 4.96e-34 126
MS.gene74017.t1 AT2G30840 30.132 302 190 9 9 305 51 336 7.49e-34 127
MS.gene74017.t1 AT1G44090 27.564 312 197 8 20 315 61 359 1.60e-33 127
MS.gene74017.t1 AT5G43450 32.645 242 139 6 13 244 52 279 4.91e-33 123
MS.gene74017.t1 AT4G21200 32.130 277 169 7 7 275 25 290 8.26e-32 121
MS.gene74017.t1 AT4G25300 34.911 169 108 2 123 290 61 228 1.60e-31 119
MS.gene74017.t1 AT5G07480 31.507 219 140 5 94 306 11 225 1.73e-31 118
MS.gene74017.t1 AT1G03400 34.649 228 135 6 20 245 54 269 3.99e-31 120
MS.gene74017.t1 AT1G50960 28.617 311 200 6 2 305 19 314 4.32e-31 119
MS.gene74017.t1 AT1G47990 26.214 309 201 8 11 305 4 299 8.19e-31 118
MS.gene74017.t1 AT2G19590 28.571 294 186 8 19 306 8 283 3.69e-30 116
MS.gene74017.t1 AT5G58660 28.671 286 174 7 15 276 27 306 7.54e-30 116
MS.gene74017.t1 AT1G30040 28.146 302 189 11 22 306 31 321 8.77e-30 116
MS.gene74017.t1 AT5G59540 31.356 236 142 5 20 245 59 284 1.19e-29 114
MS.gene74017.t1 AT4G25310 29.412 272 156 6 42 312 76 312 1.92e-29 115
MS.gene74017.t1 AT1G06620 33.755 237 131 7 20 244 60 282 3.58e-29 113
MS.gene74017.t1 AT1G04380 31.064 235 143 7 20 247 43 265 9.68e-29 112
MS.gene74017.t1 AT2G34555 27.425 299 194 11 22 306 27 316 2.19e-28 112
MS.gene74017.t1 AT2G30840 29.832 238 156 4 9 244 51 279 4.66e-28 110
MS.gene74017.t1 AT2G25450 29.236 301 186 10 10 298 48 333 1.67e-27 110
MS.gene74017.t1 AT4G25420 28.514 249 152 6 14 245 53 292 2.37e-26 106
MS.gene74017.t1 AT3G61400 31.535 241 145 8 14 245 59 288 2.54e-26 105
MS.gene74017.t1 AT4G23340 28.289 304 182 7 20 306 8 292 5.73e-26 105
MS.gene74017.t1 AT5G51810 27.419 248 148 5 19 248 60 293 2.81e-25 103
MS.gene74017.t1 AT3G47190 27.600 250 159 7 20 257 30 269 2.25e-24 101
MS.gene74017.t1 AT5G58660 26.877 253 158 5 15 245 27 274 2.40e-24 100
MS.gene74017.t1 AT3G50210 26.102 295 178 8 22 283 8 295 2.94e-24 100
MS.gene74017.t1 AT3G50210 26.102 295 178 8 22 283 8 295 2.94e-24 100
MS.gene74017.t1 AT3G50210 26.102 295 178 8 22 283 8 295 2.94e-24 100
MS.gene74017.t1 AT2G19590 28.352 261 166 7 49 306 26 268 2.85e-23 97.8
MS.gene74017.t1 AT1G02400 27.237 257 173 7 1 248 1 252 4.93e-23 96.3
MS.gene74017.t1 AT1G14130 27.857 280 187 6 22 298 9 276 2.28e-22 95.5
MS.gene74017.t1 AT3G49630 26.573 286 194 6 33 307 33 313 8.24e-22 94.4
MS.gene74017.t1 AT3G49630 26.573 286 194 6 33 307 29 309 9.84e-22 94.0
MS.gene74017.t1 AT4G22870 45.918 98 51 2 214 310 2 98 3.01e-21 87.4
MS.gene74017.t1 AT3G49620 25.828 302 187 8 15 287 27 320 8.22e-20 89.0
MS.gene74017.t1 AT1G30040 27.350 234 149 9 22 245 31 253 1.79e-19 86.7
MS.gene74017.t1 AT4G22870 46.067 89 46 2 223 310 52 139 2.92e-19 83.2
MS.gene74017.t1 AT3G46500 25.753 299 202 9 22 306 17 309 8.74e-19 85.9
MS.gene74017.t1 AT1G14120 27.397 292 184 10 15 298 4 275 4.99e-18 83.6
MS.gene74017.t1 AT1G14120 27.397 292 184 10 15 298 4 275 4.99e-18 83.6
MS.gene74017.t1 AT1G14120 27.397 292 184 10 15 298 4 275 4.99e-18 83.6
MS.gene74017.t1 AT3G50210 29.448 163 108 3 127 283 52 213 1.27e-17 81.3
MS.gene74017.t1 AT4G23340 32.402 179 104 5 139 306 2 174 2.38e-17 79.3
MS.gene74017.t1 AT1G52820 24.825 286 190 7 20 292 10 283 2.59e-17 81.3
MS.gene74017.t1 AT3G49630 28.962 183 124 4 127 307 62 240 1.03e-16 79.0
MS.gene74017.t1 AT4G16770 26.484 219 139 5 17 221 17 227 3.60e-16 77.4
MS.gene74017.t1 AT3G46490 23.397 312 200 9 22 306 17 316 6.34e-15 74.7
MS.gene74017.t1 AT1G52800 24.815 270 169 8 21 272 9 262 1.65e-14 73.2
MS.gene74017.t1 AT3G46500 24.535 269 184 8 21 275 16 279 5.13e-14 71.6
MS.gene74017.t1 AT1G28030 26.498 317 197 11 18 315 9 308 1.15e-13 70.9
MS.gene74017.t1 AT4G03070 23.102 303 212 9 17 307 9 302 5.83e-13 68.9
MS.gene74017.t1 AT3G46480 33.051 118 72 3 194 306 154 269 1.96e-11 63.9
MS.gene74017.t1 AT1G52820 23.849 239 157 7 20 245 10 236 8.18e-11 62.0

Find 81 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGTTCCTGATCTTGTTCT+AGG 0.155967 5.3:+46814302 MS.gene74017:CDS
CCTTGAACTGTTGTTGTTCC+TGG 0.237551 5.3:-46811275 None:intergenic
ATCATTTGTTTCATATTATA+TGG 0.244488 5.3:+46811576 MS.gene74017:CDS
TAATGGAAGCAAGTACAAAA+TGG 0.302252 5.3:+46811363 MS.gene74017:CDS
AAAAGTTTGTCAACTGGTCT+TGG 0.310609 5.3:+46814197 MS.gene74017:CDS
TAACTTCATTTGGAATTTCA+TGG 0.312129 5.3:-46811406 None:intergenic
AACTTTCTTATAACTTCATT+TGG 0.312678 5.3:-46811416 None:intergenic
CCAACTTCTTGTTCTGGCTT+GGG 0.319717 5.3:-46815392 None:intergenic
ATGTGAATGACAAGGGCATT+AGG 0.322438 5.3:-46814431 None:intergenic
ACCAACTTCTTGTTCTGGCT+TGG 0.322478 5.3:-46815393 None:intergenic
CACTTCATTGGGGACCAAAA+TGG 0.327391 5.3:-46814357 None:intergenic
GGATTGCTGAAATCTATTAT+AGG 0.327873 5.3:-46811314 None:intergenic
CTACAAACCCTGCTTCTTAC+AGG 0.328341 5.3:+46811630 MS.gene74017:CDS
ACCTGTTGGGTCTGATTCAT+TGG 0.330054 5.3:+46811499 MS.gene74017:CDS
TGAGGACCAACTTCTTGTTC+TGG 0.331450 5.3:-46815398 None:intergenic
ACTGAGCAATGGAAAATATA+AGG 0.341279 5.3:+46815304 MS.gene74017:CDS
TTGTCTTGGTTAACAAACTT+TGG 0.344536 5.3:-46815422 None:intergenic
TGAAGACCCTGCACTTCATT+GGG 0.346500 5.3:-46814368 None:intergenic
TTGAAGACCCTGCACTTCAT+TGG 0.353572 5.3:-46814369 None:intergenic
GTGACTCAGTTTCTGATCTA+AGG 0.366611 5.3:-46811253 None:intergenic
TGTCTTGGTTAACAAACTTT+GGG 0.383372 5.3:-46815421 None:intergenic
GTACAAAACAAAGAAATATA+AGG 0.384846 5.3:+46815457 MS.gene74017:CDS
AAAGTTTGTCAACTGGTCTT+GGG 0.397315 5.3:+46814198 MS.gene74017:CDS
TGTGAATGACAAGGGCATTA+GGG 0.398910 5.3:-46814430 None:intergenic
GATTTCAGCAATCCAGATAA+AGG 0.405449 5.3:+46811323 MS.gene74017:CDS
AATGGAAGCAAGTACAAAAT+GGG 0.407140 5.3:+46811364 MS.gene74017:CDS
CTGTAAGAAGCAGGGTTTGT+AGG 0.411623 5.3:-46811629 None:intergenic
AGGGAAGTGAATGAGGAATA+TGG 0.424371 5.3:+46814140 MS.gene74017:intron
CATTCACATTGGTGACCAAA+TGG 0.441391 5.3:+46814445 MS.gene74017:CDS
CTATTCAAAAGTTTGTCAAC+TGG 0.450928 5.3:+46814191 MS.gene74017:CDS
TATATATACATACCTCCATT+TGG 0.456033 5.3:-46814460 None:intergenic
GCTTGAAGAACATGAACTTA+AGG 0.461104 5.3:+46814220 MS.gene74017:CDS
GAGGTTATTGCTAAACCTGT+TGG 0.467337 5.3:+46811485 MS.gene74017:CDS
AGGTGAATGGGAAGAAAGGT+TGG 0.469295 5.3:+46811549 MS.gene74017:CDS
TAAACATACCTGTAAGAAGC+AGG 0.478404 5.3:-46811638 None:intergenic
TTTGGTCCCCAATGAAGTGC+AGG 0.480854 5.3:+46814361 MS.gene74017:CDS
AGGTTATTGCTAAACCTGTT+GGG 0.485082 5.3:+46811486 MS.gene74017:CDS
TCCAATGAATCAGACCCAAC+AGG 0.488108 5.3:-46811500 None:intergenic
AGCATTTCTTCCTTCACTGA+GGG 0.503814 5.3:-46815508 None:intergenic
CCAGGAACAACAACAGTTCA+AGG 0.510650 5.3:+46811275 MS.gene74017:CDS
ATAAGAAAGTTACAAAGTGT+TGG 0.512376 5.3:+46811428 MS.gene74017:CDS
GTTGGGTCTGATTCATTGGA+AGG 0.520529 5.3:+46811503 MS.gene74017:CDS
AAAGAGGTGAATGGGAAGAA+AGG 0.520644 5.3:+46811545 MS.gene74017:CDS
AAACGGTAATTAATGGAAGA+AGG 0.523112 5.3:-46811602 None:intergenic
GGCACACCTAGAACAAGATC+AGG 0.525900 5.3:-46814308 None:intergenic
TCTGATTCATTGGAAGGGTA+TGG 0.532275 5.3:+46811509 MS.gene74017:CDS
CCCAAGCCAGAACAAGAAGT+TGG 0.532702 5.3:+46815392 MS.gene74017:CDS
CCTAGAACAAGATCAGGAAC+TGG 0.541583 5.3:-46814302 None:intergenic
ACTTTGGAGGAATATTGTCT+TGG 0.543958 5.3:-46815436 None:intergenic
TGGTTAACAAACTTTGGGTG+AGG 0.545680 5.3:-46815416 None:intergenic
GGTGAATGGGAAGAAAGGTT+GGG 0.547721 5.3:+46811550 MS.gene74017:CDS
TTGGGTCTGATTCATTGGAA+GGG 0.562176 5.3:+46811504 MS.gene74017:CDS
AAGCCTCTAGAGGTGGTCAA+TGG 0.567636 5.3:+46814390 MS.gene74017:CDS
CAGGGTCTTCAAGCCTCTAG+AGG 0.569935 5.3:+46814380 MS.gene74017:CDS
CATGAACTTAAGGAAGCTGC+AGG 0.573114 5.3:+46814230 MS.gene74017:CDS
GGCTTGGGCTCTATGAACAC+TGG 0.573558 5.3:-46815377 None:intergenic
TTAATAAGATCCCTCAGTGA+AGG 0.600298 5.3:+46815498 MS.gene74017:CDS
TGGCAAGTACCTACGTGAAG+TGG 0.602357 5.3:+46814160 MS.gene74017:CDS
AAACATACCTGTAAGAAGCA+GGG 0.606412 5.3:-46811637 None:intergenic
GAGCATTTCTTCCTTCACTG+AGG 0.607034 5.3:-46815509 None:intergenic
TTGGTCCCCAATGAAGTGCA+GGG 0.611056 5.3:+46814362 MS.gene74017:CDS
GAAGACCCTGCACTTCATTG+GGG 0.614684 5.3:-46814367 None:intergenic
AATGCCCTTGTCATTCACAT+TGG 0.619150 5.3:+46814434 MS.gene74017:CDS
AGTTTCTGATCTAAGGAACA+TGG 0.619925 5.3:-46811246 None:intergenic
ACAAGATCAGGAACTGGACA+TGG 0.629971 5.3:-46814296 None:intergenic
ATACCATTGACCACCTCTAG+AGG 0.637074 5.3:-46814393 None:intergenic
AGATCAGGAACTGGACATGG+TGG 0.638247 5.3:-46814293 None:intergenic
GAACTTAAGGAAGCTGCAGG+TGG 0.638880 5.3:+46814233 MS.gene74017:CDS
AGTTCAAGGTGTGAAACTTG+AGG 0.638988 5.3:+46811289 MS.gene74017:CDS
GTCACCAATGTGAATGACAA+GGG 0.645586 5.3:-46814438 None:intergenic
AGAAAAGACATATCTGTGTG+TGG 0.647390 5.3:-46814332 None:intergenic
ATGGAAGCAAGTACAAAATG+GGG 0.648572 5.3:+46811365 MS.gene74017:CDS
GGTCACCAATGTGAATGACA+AGG 0.648978 5.3:-46814439 None:intergenic
AGATCAGAAACTGAGTCACC+AGG 0.650587 5.3:+46811257 MS.gene74017:CDS
GGTCTTCAAGCCTCTAGAGG+TGG 0.651717 5.3:+46814383 MS.gene74017:CDS
GATCAGGAACTGGACATGGT+GGG 0.653909 5.3:-46814292 None:intergenic
TCACATTGGTGACCAAATGG+AGG 0.676061 5.3:+46814448 MS.gene74017:CDS
CGGTAATTAATGGAAGAAGG+TGG 0.685706 5.3:-46811599 None:intergenic
AAAGACATATCTGTGTGTGG+AGG 0.700387 5.3:-46814329 None:intergenic
AAGATGAGACAAGAATGTCG+TGG 0.735854 5.3:+46815354 MS.gene74017:CDS
GTTTGTCTGCCACTTCACGT+AGG 0.737897 5.3:-46814169 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATATATATATATATAT+TGG + chr5.3:46815012-46815031 MS.gene74017:intron 0.0%
!! AAAAATACAAAATGAAATAA+TGG + chr5.3:46811346-46811365 MS.gene74017:CDS 10.0%
!!! TTGTTTTTTAATTTTGTTAT+TGG + chr5.3:46813804-46813823 MS.gene74017:intron 10.0%
!! AAAGAACATATTATTAAAGA+AGG + chr5.3:46813684-46813703 MS.gene74017:intron 15.0%
!! AATTATAAGTAGAGTAATTA+AGG - chr5.3:46811726-46811745 None:intergenic 15.0%
!! ATAAAAAGAAATAAACTTAG+AGG + chr5.3:46813710-46813729 MS.gene74017:intron 15.0%
!! ATATTGTTGTATAATTAACT+TGG + chr5.3:46814651-46814670 MS.gene74017:intron 15.0%
!! ATCATTTGTTTCATATTATA+TGG + chr5.3:46811576-46811595 MS.gene74017:CDS 15.0%
!! ATTTAAATTTAATGAGAGAA+TGG + chr5.3:46812601-46812620 MS.gene74017:intron 15.0%
!! TATCTAAACTTAATCTATAA+GGG + chr5.3:46813283-46813302 MS.gene74017:intron 15.0%
!! TATTCTTATCGTATAAATAA+GGG - chr5.3:46812638-46812657 None:intergenic 15.0%
!! TCAATAAACATTTAATACTT+CGG - chr5.3:46813251-46813270 None:intergenic 15.0%
!! TTACATGTTTAAATTATCAT+AGG - chr5.3:46812454-46812473 None:intergenic 15.0%
!! TTATCTAAACTTAATCTATA+AGG + chr5.3:46813282-46813301 MS.gene74017:intron 15.0%
!! TTATTCTTATCGTATAAATA+AGG - chr5.3:46812639-46812658 None:intergenic 15.0%
!! TTTATCTTCAATACTAAATA+TGG - chr5.3:46813309-46813328 None:intergenic 15.0%
!!! AAAAATAGAATTTTCTATCT+TGG + chr5.3:46812017-46812036 MS.gene74017:intron 15.0%
!!! AACTCATTTTTATTGTTATT+AGG - chr5.3:46815169-46815188 None:intergenic 15.0%
!!! AAGATAGAAAATTCTATTTT+TGG - chr5.3:46812018-46812037 None:intergenic 15.0%
!!! ACGATGAATATATTTTTATA+TGG - chr5.3:46812148-46812167 None:intergenic 15.0%
!!! TATTTATTTTTCTTTCTGAA+AGG + chr5.3:46812760-46812779 MS.gene74017:intron 15.0%
!!! TTTTCTTTTTCTAAACAAAA+AGG - chr5.3:46813350-46813369 None:intergenic 15.0%
!! AACATTTGTCCATATAAAAA+GGG + chr5.3:46811953-46811972 MS.gene74017:intron 20.0%
!! AACTTTCTTATAACTTCATT+TGG - chr5.3:46811419-46811438 None:intergenic 20.0%
!! ATATTCAAATAAACACACAT+GGG + chr5.3:46813842-46813861 MS.gene74017:intron 20.0%
!! GTACAAAACAAAGAAATATA+AGG + chr5.3:46815457-46815476 MS.gene74017:CDS 20.0%
!! TAAACATGTAAACATAAGTT+AGG + chr5.3:46812463-46812482 MS.gene74017:intron 20.0%
!! TAACATTTGTCCATATAAAA+AGG + chr5.3:46811952-46811971 MS.gene74017:intron 20.0%
!! TACTCTAACAATAAAATACA+AGG - chr5.3:46811750-46811769 None:intergenic 20.0%
!! TCATATAATAAACACATGTA+AGG - chr5.3:46813122-46813141 None:intergenic 20.0%
!!! AGGTTATTATTATTTTGAGT+TGG + chr5.3:46811851-46811870 MS.gene74017:intron 20.0%
!!! GTTACAAGTACTTTTAATAT+AGG - chr5.3:46812513-46812532 None:intergenic 20.0%
!!! TATTTCTTTGTTTTGTACTT+TGG - chr5.3:46815455-46815474 None:intergenic 20.0%
!!! TTTTGTATTTTTCCTTTATC+TGG - chr5.3:46811338-46811357 None:intergenic 20.0%
! AAAAAGGACATGTTAAACAT+CGG - chr5.3:46814816-46814835 None:intergenic 25.0%
! AAAGTTGTATGTAGAGAAAA+AGG + chr5.3:46812671-46812690 MS.gene74017:intron 25.0%
! AATTATAGATCACTCATGTA+AGG - chr5.3:46814046-46814065 None:intergenic 25.0%
! AATTGTTAGTAGTTCTTTAG+AGG - chr5.3:46811933-46811952 None:intergenic 25.0%
! ACGTTGTTTGTTTATGTAAA+TGG - chr5.3:46813149-46813168 None:intergenic 25.0%
! AGAAATAAGTCAATAACTCT+AGG + chr5.3:46813186-46813205 MS.gene74017:intron 25.0%
! ATAAGAAAGTTACAAAGTGT+TGG + chr5.3:46811428-46811447 MS.gene74017:CDS 25.0%
! ATTGTTAGTAGTTCTTTAGA+GGG - chr5.3:46811932-46811951 None:intergenic 25.0%
! ATTTAATTAACCCTTCCAAA+AGG + chr5.3:46812826-46812845 MS.gene74017:intron 25.0%
! CATATTCAAATAAACACACA+TGG + chr5.3:46813841-46813860 MS.gene74017:intron 25.0%
! CGTTGTTTGTTTATGTAAAT+GGG - chr5.3:46813148-46813167 None:intergenic 25.0%
! GAAAATTCAAACTCATAAAG+AGG - chr5.3:46812952-46812971 None:intergenic 25.0%
! GTGTTTATTTGAATATGTGT+AGG - chr5.3:46813838-46813857 None:intergenic 25.0%
! TATATATACATACCTCCATT+TGG - chr5.3:46814463-46814482 None:intergenic 25.0%
! TATTCAAATAAACACACATG+GGG + chr5.3:46813843-46813862 MS.gene74017:intron 25.0%
! TTTAATTAACCCTTCCAAAA+GGG + chr5.3:46812827-46812846 MS.gene74017:intron 25.0%
!! AAGATTTTCTTGGTTACAAT+TGG - chr5.3:46812906-46812925 None:intergenic 25.0%
!! ATTTTATAGATACTGAGCAA+TGG + chr5.3:46815293-46815312 MS.gene74017:intron 25.0%
!! CTTGTTCTTGTTAAGTATTT+TGG + chr5.3:46813426-46813445 MS.gene74017:intron 25.0%
!! TAACAAAAACTTCCTTCTTT+TGG + chr5.3:46812084-46812103 MS.gene74017:intron 25.0%
!! TAACTTCATTTGGAATTTCA+TGG - chr5.3:46811409-46811428 None:intergenic 25.0%
!! TACATTCTTTTTGTTAGAGT+AGG + chr5.3:46811831-46811850 MS.gene74017:intron 25.0%
!! TATGTCTTTTCTTACCATTT+TGG + chr5.3:46814343-46814362 MS.gene74017:CDS 25.0%
!! TTAACAAGACCCTTTTTATA+TGG - chr5.3:46811965-46811984 None:intergenic 25.0%
!! TTCTGAAAGGTTTATATTAG+TGG + chr5.3:46812773-46812792 MS.gene74017:intron 25.0%
!! TTTTTCTAAACAAAAAGGAG+AGG - chr5.3:46813345-46813364 None:intergenic 25.0%
!!! ACTTGTTTACTTTTTTTGCA+GGG + chr5.3:46814121-46814140 MS.gene74017:intron 25.0%
!!! ATATCGGTTTATTATTTTGC+AGG - chr5.3:46814729-46814748 None:intergenic 25.0%
!!! GAGTTATTGACTTATTTCTA+TGG - chr5.3:46813185-46813204 None:intergenic 25.0%
!!! TTATTGACTTATTTCTATGG+AGG - chr5.3:46813182-46813201 None:intergenic 25.0%
AAACGGTAATTAATGGAAGA+AGG - chr5.3:46811605-46811624 None:intergenic 30.0%
AAACTTCAAAAAGAGGTGAA+TGG + chr5.3:46811536-46811555 MS.gene74017:CDS 30.0%
AACTTCAAAAAGAGGTGAAT+GGG + chr5.3:46811537-46811556 MS.gene74017:CDS 30.0%
AATGGAAGCAAGTACAAAAT+GGG + chr5.3:46811364-46811383 MS.gene74017:CDS 30.0%
ACATTTAATACTTCGGTTAG+AGG - chr5.3:46813244-46813263 None:intergenic 30.0%
ACTGAGCAATGGAAAATATA+AGG + chr5.3:46815304-46815323 MS.gene74017:CDS 30.0%
ATAAACAAACAACGTGTACT+TGG + chr5.3:46813154-46813173 MS.gene74017:intron 30.0%
ATAAACACATGTAAGGAAAG+TGG - chr5.3:46813115-46813134 None:intergenic 30.0%
ATAAACCGATATGTAATCTC+AGG + chr5.3:46814737-46814756 MS.gene74017:intron 30.0%
ATCACAATAAAGGACTATGT+TGG + chr5.3:46813628-46813647 MS.gene74017:intron 30.0%
CCAAATCAATAGAAACCAAT+AGG + chr5.3:46813925-46813944 MS.gene74017:intron 30.0%
CTATTCAAAAGTTTGTCAAC+TGG + chr5.3:46814191-46814210 MS.gene74017:CDS 30.0%
GAGGATTTGTGTTTATTAAG+CGG - chr5.3:46814794-46814813 None:intergenic 30.0%
GGACTATTTCAAAAACTCAA+AGG + chr5.3:46813731-46813750 MS.gene74017:intron 30.0%
GGATTGCTGAAATCTATTAT+AGG - chr5.3:46811317-46811336 None:intergenic 30.0%
GTATATGCAACATGTGAATT+AGG + chr5.3:46812722-46812741 MS.gene74017:intron 30.0%
TAATACGACAAGTGTGATAT+AGG - chr5.3:46813463-46813482 None:intergenic 30.0%
TAATGGAAGCAAGTACAAAA+TGG + chr5.3:46811363-46811382 MS.gene74017:CDS 30.0%
TGAAATTGTGCCTAAAAATG+TGG + chr5.3:46814510-46814529 MS.gene74017:intron 30.0%
TGGTACAAAACTTCAAAAAG+AGG + chr5.3:46811529-46811548 MS.gene74017:CDS 30.0%
TGGTATGATTCATACCAAAA+AGG - chr5.3:46814832-46814851 None:intergenic 30.0%
TGTCTTGGTTAACAAACTTT+GGG - chr5.3:46815424-46815443 None:intergenic 30.0%
TGTTTGTTTATGTAAATGGG+TGG - chr5.3:46813145-46813164 None:intergenic 30.0%
TTACAATTGGAGGTAAGATA+GGG - chr5.3:46812893-46812912 None:intergenic 30.0%
TTGTCTTGGTTAACAAACTT+TGG - chr5.3:46815425-46815444 None:intergenic 30.0%
TTTCTTGAAAAACAGAGGAA+GGG + chr5.3:46815046-46815065 MS.gene74017:intron 30.0%
! ATTTTCTTGGTTACAATTGG+AGG - chr5.3:46812903-46812922 None:intergenic 30.0%
! CTTCCATTAATTACCGTTTT+TGG + chr5.3:46811606-46811625 MS.gene74017:CDS 30.0%
! GATGTTTAACATGTCCTTTT+TGG + chr5.3:46814815-46814834 MS.gene74017:intron 30.0%
! TTGTATAATTAACTTGGCCA+CGG + chr5.3:46814657-46814676 MS.gene74017:intron 30.0%
!! ATAACCTCTTTTTCATCTTG+TGG - chr5.3:46811473-46811492 None:intergenic 30.0%
!! CCTATTGGTTTCTATTGATT+TGG - chr5.3:46813928-46813947 None:intergenic 30.0%
!!! AAAATTTTGAGTTCGAACTC+TGG - chr5.3:46813886-46813905 None:intergenic 30.0%
!!! ACATACAAAGAGTACCTTTT+AGG + chr5.3:46811874-46811893 MS.gene74017:intron 30.0%
!!! CACTTGTTTACTTTTTTTGC+AGG + chr5.3:46814120-46814139 MS.gene74017:intron 30.0%
!!! TTCTTTGTTTTGTACTTTGG+AGG - chr5.3:46815452-46815471 None:intergenic 30.0%
AAACATACCTGTAAGAAGCA+GGG - chr5.3:46811640-46811659 None:intergenic 35.0%
AACAAATACACTGAGTTCCT+AGG - chr5.3:46814901-46814920 None:intergenic 35.0%
ACAAGTGTGATATAGGTAGA+TGG - chr5.3:46813456-46813475 None:intergenic 35.0%
ACCACATGAAACATAAACCT+AGG + chr5.3:46814881-46814900 MS.gene74017:intron 35.0%
AGAAAAGACATATCTGTGTG+TGG - chr5.3:46814335-46814354 None:intergenic 35.0%
AGGCCAAAAACGGTAATTAA+TGG - chr5.3:46811612-46811631 None:intergenic 35.0%
AGGTTATTGCTAAACCTGTT+GGG + chr5.3:46811486-46811505 MS.gene74017:CDS 35.0%
AGTAGTCCATTATTTGAGCT+GGG + chr5.3:46811766-46811785 MS.gene74017:intron 35.0%
AGTGCTTTCTTGAAAAACAG+AGG + chr5.3:46815041-46815060 MS.gene74017:intron 35.0%
ATGGAAGCAAGTACAAAATG+GGG + chr5.3:46811365-46811384 MS.gene74017:CDS 35.0%
ATTGTGCCTAAAAATGTGGT+TGG + chr5.3:46814514-46814533 MS.gene74017:intron 35.0%
CTGAATGACTCTTATGAGTT+GGG - chr5.3:46813657-46813676 None:intergenic 35.0%
CTTTCTTGAAAAACAGAGGA+AGG + chr5.3:46815045-46815064 MS.gene74017:intron 35.0%
GAACACTAACATTTAGTTGG+AGG - chr5.3:46812930-46812949 None:intergenic 35.0%
GAGGAACACTAACATTTAGT+TGG - chr5.3:46812933-46812952 None:intergenic 35.0%
GATCAACAAACAGCAACTAA+GGG + chr5.3:46815107-46815126 MS.gene74017:intron 35.0%
GATTTCAGCAATCCAGATAA+AGG + chr5.3:46811323-46811342 MS.gene74017:CDS 35.0%
GCTTGAAGAACATGAACTTA+AGG + chr5.3:46814220-46814239 MS.gene74017:CDS 35.0%
GTTACAATTGGAGGTAAGAT+AGG - chr5.3:46812894-46812913 None:intergenic 35.0%
GTTACCACAAGATGAAAAAG+AGG + chr5.3:46811466-46811485 MS.gene74017:CDS 35.0%
TAAACATACCTGTAAGAAGC+AGG - chr5.3:46811641-46811660 None:intergenic 35.0%
TAGGAACTCAGTGTATTTGT+TGG + chr5.3:46814900-46814919 MS.gene74017:intron 35.0%
TCCTAGGTTTATGTTTCATG+TGG - chr5.3:46814885-46814904 None:intergenic 35.0%
TCTAAACAAAAAGGAGAGGT+AGG - chr5.3:46813341-46813360 None:intergenic 35.0%
TGATCAACAAACAGCAACTA+AGG + chr5.3:46815106-46815125 MS.gene74017:intron 35.0%
TTAGGTGTGCATCACAATAA+AGG + chr5.3:46813618-46813637 MS.gene74017:intron 35.0%
! AAAAGTTTGTCAACTGGTCT+TGG + chr5.3:46814197-46814216 MS.gene74017:CDS 35.0%
! ACTATGCCAACCACATTTTT+AGG - chr5.3:46814523-46814542 None:intergenic 35.0%
! ACTTTGGAGGAATATTGTCT+TGG - chr5.3:46815439-46815458 None:intergenic 35.0%
! AGTTGGAGGTAAGATTTTCT+TGG - chr5.3:46812916-46812935 None:intergenic 35.0%
! GTGTATTTGTTGGAGAGAAA+AGG + chr5.3:46814910-46814929 MS.gene74017:intron 35.0%
!! AAAGTTTGTCAACTGGTCTT+GGG + chr5.3:46814198-46814217 MS.gene74017:CDS 35.0%
!! TTTGTTCTGAAGTGCAAAGA+AGG + chr5.3:46812854-46812873 MS.gene74017:intron 35.0%
!!! TACAAAGAGTACCTTTTAGG+AGG + chr5.3:46811877-46811896 MS.gene74017:intron 35.0%
AAAGACATATCTGTGTGTGG+AGG - chr5.3:46814332-46814351 None:intergenic 40.0%
AAAGAGGTGAATGGGAAGAA+AGG + chr5.3:46811545-46811564 MS.gene74017:CDS 40.0%
AAGATGAGACAAGAATGTCG+TGG + chr5.3:46815354-46815373 MS.gene74017:CDS 40.0%
AAGGACATGTTAAACATCGG+AGG - chr5.3:46814813-46814832 None:intergenic 40.0%
AATGCCCTTGTCATTCACAT+TGG + chr5.3:46814434-46814453 MS.gene74017:CDS 40.0%
ACTGGTTAAGCACCAAAAGA+AGG - chr5.3:46812099-46812118 None:intergenic 40.0%
ACTTTACTACCTCTCACACT+CGG - chr5.3:46812431-46812450 None:intergenic 40.0%
AGGGAAGTGAATGAGGAATA+TGG + chr5.3:46814140-46814159 MS.gene74017:intron 40.0%
AGTGTGATATAGGTAGATGG+TGG - chr5.3:46813453-46813472 None:intergenic 40.0%
AGTTCAAGGTGTGAAACTTG+AGG + chr5.3:46811289-46811308 MS.gene74017:CDS 40.0%
CAAGCAAGACAAAAGAGATG+TGG - chr5.3:46813410-46813429 None:intergenic 40.0%
CCAGTTATTGACCTCCTAAA+AGG - chr5.3:46811891-46811910 None:intergenic 40.0%
CGGTAATTAATGGAAGAAGG+TGG - chr5.3:46811602-46811621 None:intergenic 40.0%
GAGGTTATTGCTAAACCTGT+TGG + chr5.3:46811485-46811504 MS.gene74017:CDS 40.0%
GAGTAGTCCATTATTTGAGC+TGG + chr5.3:46811765-46811784 MS.gene74017:intron 40.0%
GCTGAATGACTCTTATGAGT+TGG - chr5.3:46813658-46813677 None:intergenic 40.0%
GTATGTCCCAGCTCAAATAA+TGG - chr5.3:46811775-46811794 None:intergenic 40.0%
GTCACCAATGTGAATGACAA+GGG - chr5.3:46814441-46814460 None:intergenic 40.0%
GTGACTCAGTTTCTGATCTA+AGG - chr5.3:46811256-46811275 None:intergenic 40.0%
TATATTTATCCCCAGAGGCT+GGG + chr5.3:46812397-46812416 MS.gene74017:intron 40.0%
TCACGCCTGAGATTACATAT+CGG - chr5.3:46814745-46814764 None:intergenic 40.0%
TCTGATTCATTGGAAGGGTA+TGG + chr5.3:46811509-46811528 MS.gene74017:CDS 40.0%
TGGTTAACAAACTTTGGGTG+AGG - chr5.3:46815419-46815438 None:intergenic 40.0%
TTGGGTCTGATTCATTGGAA+GGG + chr5.3:46811504-46811523 MS.gene74017:CDS 40.0%
! AACAAAGTCTCCCTTTTGGA+AGG - chr5.3:46812840-46812859 None:intergenic 40.0%
! AACCAATAGGCTCTAACAAC+AGG + chr5.3:46813938-46813957 MS.gene74017:intron 40.0%
! AAGTGCAAAGAAGGTTTGGT+TGG + chr5.3:46812863-46812882 MS.gene74017:intron 40.0%
! ACCAATAGGCTCTAACAACA+GGG + chr5.3:46813939-46813958 MS.gene74017:intron 40.0%
! CATTCACATTGGTGACCAAA+TGG + chr5.3:46814445-46814464 MS.gene74017:CDS 40.0%
! CTCTGGGGATAAATATAGGT+GGG - chr5.3:46812394-46812413 None:intergenic 40.0%
! TCAGAACAAAGTCTCCCTTT+TGG - chr5.3:46812844-46812863 None:intergenic 40.0%
! TCTGAAGTGCAAAGAAGGTT+TGG + chr5.3:46812859-46812878 MS.gene74017:intron 40.0%
! TTTTTGCAGGGAAGTGAATG+AGG + chr5.3:46814133-46814152 MS.gene74017:intron 40.0%
!! ACAAAGTCTCCCTTTTGGAA+GGG - chr5.3:46812839-46812858 None:intergenic 40.0%
!! ATGTGAATGACAAGGGCATT+AGG - chr5.3:46814434-46814453 None:intergenic 40.0%
!! CCTTTTAGGAGGTCAATAAC+TGG + chr5.3:46811888-46811907 MS.gene74017:intron 40.0%
!! TCAAGCTATTTTGTCGCATG+TGG - chr5.3:46814852-46814871 None:intergenic 40.0%
!! TGTGAATGACAAGGGCATTA+GGG - chr5.3:46814433-46814452 None:intergenic 40.0%
AATGTTAACCAGTGCTCCAG+GGG - chr5.3:46812123-46812142 None:intergenic 45.0%
ACAAGATCAGGAACTGGACA+TGG - chr5.3:46814299-46814318 None:intergenic 45.0%
ACCTGTTGGGTCTGATTCAT+TGG + chr5.3:46811499-46811518 MS.gene74017:CDS 45.0%
AGAATGTTAACCAGTGCTCC+AGG - chr5.3:46812125-46812144 None:intergenic 45.0%
AGATCAGAAACTGAGTCACC+AGG + chr5.3:46811257-46811276 MS.gene74017:CDS 45.0%
AGGTGAATGGGAAGAAAGGT+TGG + chr5.3:46811549-46811568 MS.gene74017:CDS 45.0%
ATACCATTGACCACCTCTAG+AGG - chr5.3:46814396-46814415 None:intergenic 45.0%
CACATGGGGAGAAGAAAATG+TGG + chr5.3:46813857-46813876 MS.gene74017:intron 45.0%
CACTTCATTGGGGACCAAAA+TGG - chr5.3:46814360-46814379 None:intergenic 45.0%
CAGGGTTTGTAGGCCAAAAA+CGG - chr5.3:46811622-46811641 None:intergenic 45.0%
CATGAACTTAAGGAAGCTGC+AGG + chr5.3:46814230-46814249 MS.gene74017:CDS 45.0%
CCACCTATATTTATCCCCAG+AGG + chr5.3:46812392-46812411 MS.gene74017:intron 45.0%
CCAGGAACAACAACAGTTCA+AGG + chr5.3:46811275-46811294 MS.gene74017:CDS 45.0%
CCAGTTCCTGATCTTGTTCT+AGG + chr5.3:46814302-46814321 MS.gene74017:CDS 45.0%
CCTAGAACAAGATCAGGAAC+TGG - chr5.3:46814305-46814324 None:intergenic 45.0%
CTACAAACCCTGCTTCTTAC+AGG + chr5.3:46811630-46811649 MS.gene74017:CDS 45.0%
CTATATTTATCCCCAGAGGC+TGG + chr5.3:46812396-46812415 MS.gene74017:intron 45.0%
CTGTAAGAAGCAGGGTTTGT+AGG - chr5.3:46811632-46811651 None:intergenic 45.0%
CTTTACTACCTCTCACACTC+GGG - chr5.3:46812430-46812449 None:intergenic 45.0%
GAATGTTAACCAGTGCTCCA+GGG - chr5.3:46812124-46812143 None:intergenic 45.0%
GGTCACCAATGTGAATGACA+AGG - chr5.3:46814442-46814461 None:intergenic 45.0%
GGTGAATGGGAAGAAAGGTT+GGG + chr5.3:46811550-46811569 MS.gene74017:CDS 45.0%
GTTGGGTCTGATTCATTGGA+AGG + chr5.3:46811503-46811522 MS.gene74017:CDS 45.0%
TCCAATGAATCAGACCCAAC+AGG - chr5.3:46811503-46811522 None:intergenic 45.0%
TCCCTGTTGTTAGAGCCTAT+TGG - chr5.3:46813943-46813962 None:intergenic 45.0%
TGAAGACCCTGCACTTCATT+GGG - chr5.3:46814371-46814390 None:intergenic 45.0%
TGAGGACCAACTTCTTGTTC+TGG - chr5.3:46815401-46815420 None:intergenic 45.0%
TTGAAGACCCTGCACTTCAT+TGG - chr5.3:46814372-46814391 None:intergenic 45.0%
! ACCAACTTCTTGTTCTGGCT+TGG - chr5.3:46815396-46815415 None:intergenic 45.0%
! CAGCCTCTGGGGATAAATAT+AGG - chr5.3:46812398-46812417 None:intergenic 45.0%
! CCTCTGGGGATAAATATAGG+TGG - chr5.3:46812395-46812414 None:intergenic 45.0%
! CCTTGAACTGTTGTTGTTCC+TGG - chr5.3:46811278-46811297 None:intergenic 45.0%
! TCACATTGGTGACCAAATGG+AGG + chr5.3:46814448-46814467 MS.gene74017:CDS 45.0%
! TGTTGATAGAGCTGTATCCG+TGG - chr5.3:46814677-46814696 None:intergenic 45.0%
!! CCAACTTCTTGTTCTGGCTT+GGG - chr5.3:46815395-46815414 None:intergenic 45.0%
!!! AATTTTGATTTTTTTTTTTT+AGG - chr5.3:46815193-46815212 None:intergenic 5.0%
!!! ATATATATTTTTTTTTTTGA+AGG - chr5.3:46814582-46814601 None:intergenic 5.0%
!!! ATTTTGATTTTTTTTTTTTA+GGG - chr5.3:46815192-46815211 None:intergenic 5.0%
!!! TATATATTTTTTTTTTTGAA+GGG - chr5.3:46814581-46814600 None:intergenic 5.0%
!!! TTTATTTTATAAAATCAATT+AGG + chr5.3:46813600-46813619 MS.gene74017:intron 5.0%
AGATCAGGAACTGGACATGG+TGG - chr5.3:46814296-46814315 None:intergenic 50.0%
AGGGTAGTGTGAGTGGTTGT+TGG + chr5.3:46815065-46815084 MS.gene74017:intron 50.0%
ATTCCTTAACCAGTGTCCCG+GGG - chr5.3:46811995-46812014 None:intergenic 50.0%
CCCAAGCCAGAACAAGAAGT+TGG + chr5.3:46815392-46815411 MS.gene74017:CDS 50.0%
GAACTTAAGGAAGCTGCAGG+TGG + chr5.3:46814233-46814252 MS.gene74017:CDS 50.0%
GAAGACCCTGCACTTCATTG+GGG - chr5.3:46814370-46814389 None:intergenic 50.0%
GACATATACCCGAGTGTGAG+AGG + chr5.3:46812419-46812438 MS.gene74017:intron 50.0%
GATCAGGAACTGGACATGGT+GGG - chr5.3:46814295-46814314 None:intergenic 50.0%
GATTCCTTAACCAGTGTCCC+GGG - chr5.3:46811996-46812015 None:intergenic 50.0%
GGATTCCTTAACCAGTGTCC+CGG - chr5.3:46811997-46812016 None:intergenic 50.0%
GGCACACCTAGAACAAGATC+AGG - chr5.3:46814311-46814330 None:intergenic 50.0%
TGGCAAGTACCTACGTGAAG+TGG + chr5.3:46814160-46814179 MS.gene74017:CDS 50.0%
TTGGTCCCCAATGAAGTGCA+GGG + chr5.3:46814362-46814381 MS.gene74017:CDS 50.0%
TTTGGTCCCCAATGAAGTGC+AGG + chr5.3:46814361-46814380 MS.gene74017:CDS 50.0%
! AAGCCTCTAGAGGTGGTCAA+TGG + chr5.3:46814390-46814409 MS.gene74017:CDS 50.0%
! GTTTGTCTGCCACTTCACGT+AGG - chr5.3:46814172-46814191 None:intergenic 50.0%
CAGAGGAAGGGTAGTGTGAG+TGG + chr5.3:46815058-46815077 MS.gene74017:intron 55.0%
CAGGGTCTTCAAGCCTCTAG+AGG + chr5.3:46814380-46814399 MS.gene74017:CDS 55.0%
GGCTTGGGCTCTATGAACAC+TGG - chr5.3:46815380-46815399 None:intergenic 55.0%
GGGTATATGTCCCAGCCTCT+GGG - chr5.3:46812410-46812429 None:intergenic 55.0%
GGTATATGTCCCAGCCTCTG+GGG - chr5.3:46812409-46812428 None:intergenic 55.0%
TCTTGTTAACCAGTGCCCCC+GGG + chr5.3:46811976-46811995 MS.gene74017:intron 55.0%
TTCCTTAACCAGTGTCCCGG+GGG - chr5.3:46811994-46812013 None:intergenic 55.0%
! GGTCTTCAAGCCTCTAGAGG+TGG + chr5.3:46814383-46814402 MS.gene74017:CDS 55.0%
! GTCTTGTTAACCAGTGCCCC+CGG + chr5.3:46811975-46811994 MS.gene74017:intron 55.0%
CGGGTATATGTCCCAGCCTC+TGG - chr5.3:46812411-46812430 None:intergenic 60.0%
TGGTGCTTAACCAGTGCCCC+TGG + chr5.3:46812104-46812123 MS.gene74017:intron 60.0%
AACCAGTGCCCCTGGAGCAC+TGG + chr5.3:46812112-46812131 MS.gene74017:intron 65.0%
! AACCAGTGCTCCAGGGGCAC+TGG - chr5.3:46812117-46812136 None:intergenic 65.0%
! TGCCCCCGGGACACTGGTTA+AGG + chr5.3:46811989-46812008 MS.gene74017:intron 65.0%
AACCAGTGCCCCCGGGACAC+TGG + chr5.3:46811983-46812002 MS.gene74017:intron 70.0%
! AACCAGTGTCCCGGGGGCAC+TGG - chr5.3:46811988-46812007 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 46811248 46815517 46811248 ID=MS.gene74017
chr5.3 mRNA 46811248 46815517 46811248 ID=MS.gene74017.t1;Parent=MS.gene74017
chr5.3 exon 46811248 46811651 46811248 ID=MS.gene74017.t1.exon1;Parent=MS.gene74017.t1
chr5.3 CDS 46811248 46811651 46811248 ID=cds.MS.gene74017.t1;Parent=MS.gene74017.t1
chr5.3 exon 46814142 46814469 46814142 ID=MS.gene74017.t1.exon2;Parent=MS.gene74017.t1
chr5.3 CDS 46814142 46814469 46814142 ID=cds.MS.gene74017.t1;Parent=MS.gene74017.t1
chr5.3 exon 46815302 46815517 46815302 ID=MS.gene74017.t1.exon3;Parent=MS.gene74017.t1
chr5.3 CDS 46815302 46815517 46815302 ID=cds.MS.gene74017.t1;Parent=MS.gene74017.t1
Gene Sequence

>MS.gene74017

ATGTTCCTTAGATCAGAAACTGAGTCACCAGGAACAACAACAGTTCAAGGTGTGAAACTTGAGGTACCTATAATAGATTTCAGCAATCCAGATAAAGGAAAAATACAAAATGAAATAATGGAAGCAAGTACAAAATGGGGAATGTTTCAAATTGTGAACCATGAAATTCCAAATGAAGTTATAAGAAAGTTACAAAGTGTTGGTAAAGAGTTTTTTGAGTTACCACAAGATGAAAAAGAGGTTATTGCTAAACCTGTTGGGTCTGATTCATTGGAAGGGTATGGTACAAAACTTCAAAAAGAGGTGAATGGGAAGAAAGGTTGGGTAGATCATTTGTTTCATATTATATGGCCACCTTCTTCCATTAATTACCGTTTTTGGCCTACAAACCCTGCTTCTTACAGGTATGTTTATAATTTAATTAATTTCAATAATAATGTTAACTTTTTTCTTTTACAAAGAATAATGTTGTTATCCTTAATTACTCTACTTATAATTTCCTTGTATTTTATTGTTAGAGTAGTCCATTATTTGAGCTGGGACATACTATGAATACTTTTTAGAGTTCAATAATTTGTTCTCGTACATTCTTTTTGTTAGAGTAGGTTATTATTATTTTGAGTTGGACATACAAAGAGTACCTTTTAGGAGGTCAATAACTGGCTCTCATACATTTCTTCTCCCTCTAAAGAACTACTAACAATTAACATTTGTCCATATAAAAAGGGTCTTGTTAACCAGTGCCCCCGGGACACTGGTTAAGGAATCCAAAAATAGAATTTTCTATCTTGGAACTATAAATTGTCACTTTTGATCAAGATAATTACATTACTTTTTAACAAAAACTTCCTTCTTTTGGTGCTTAACCAGTGCCCCTGGAGCACTGGTTAACATTCTCCATATAAAAATATATTCATCGTTATAACAAAATTTGTTTTATTTTGATTAAATTACTCTTATTAGTAAACTAGTTAGCTAATAAAATAGTTAGTTAGTAGTTAAATATTAAAATATATATTTGTAATTGAGTTTAATTGATTCAGTTTCGAAAAACTAATATGAAATTTGAACAGATCTGACAATTTTTACAAAAGATATCTAGTAAAATACTATTACAAGTATTATGAAACTGTTATAATGCAACCCACCTATATTTATCCCCAGAGGCTGGGACATATACCCGAGTGTGAGAGGTAGTAAAGTCCTATGATAATTTAAACATGTAAACATAAGTTAGGTCTAAACTTTAAGAGAATCTTTTGCCTATATTAAAAGTACTTGTAACATCGTAGAATTTAATAAAAAGTGTAAGTTATTTATTTATTTATTTGTTCTAACAATTTTGTACAAACGATTTAAATTTAATGAGAGAATGGTGTTAGTGTCACCCTTATTTATACGATAAGAATAAAATTTATTAAAAAAAGTTGTATGTAGAGAAAAAGGAAATGTCGCAATCTAGATCTCTAGAGTCGTATATGCAACATGTGAATTAGGTTGCATTGAAAGATTTATTTATTTTTCTTTCTGAAAGGTTTATATTAGTGGTAACATTATTAAAATAATAACATTTATGCAATTTAATTAACCCTTCCAAAAGGGAGACTTTGTTCTGAAGTGCAAAGAAGGTTTGGTTGGTAGTCCCTATCTTACCTCCAATTGTAACCAAGAAAATCTTACCTCCAACTAAATGTTAGTGTTCCTCTTTATGAGTTTGAATTTTCTTCATTTCTAAAAAATATATAAAAGATTCAATTTTGTAAAGAGATAATATACAAAAAAAATTTTATTTTTGTAAACTTTTTGTTTTTATCTTTCAAATAAAATTATCTTCTTTTTAGAAAATGAAGATGATACTTACTAGCCACTTTCCTTACATGTGTTTATTATATGACCACCCATTTACATAAACAAACAACGTGTACTTGGCTCCTCCATAGAAATAAGTCAATAACTCTAGGAAGTGTTAAACTTACTACTATATTGAGTAAATCCTCTAACCGAAGTATTAAATGTTTATTGAAACTTGAATATTTATCTAAACTTAATCTATAAGGGCCATATTTAGTATTGAAGATAAATATTTTACTCCTACCTCTCCTTTTTGTTTAGAAAAAGAAAAATGTTATAAGTTATACTTGTGAAGTACACACTCAATACCACATCTCTTTTGTCTTGCTTGTTCTTGTTAAGTATTTTGGACCACCATCTACCTATATCACACTTGTCGTATTAACTAACATTTATTAATTACATGCGTTTCTAAATATATGTAACTTACTTATTTCAAATTGAAACTAATAAGATTATTTTAAGTATTTCATTTAGAAATTTTAAGTTCATTTAGTCATTTTTATTTTATAAAATCAATTAGGTGTGCATCACAATAAAGGACTATGTTGGCATCCCAACTCATAAGAGTCATTCAGCATCTCAAAAGAACATATTATTAAAGAAGGAAAATAAAAAGAAATAAACTTAGAGGACTATTTCAAAAACTCAAAGGAAAACACAATGTTAAGCTTATAATAATACTAATTAATTTTCTTAATTTTTTTGTTTTTTAATTTTGTTATTGGCTTAGAGTCCTACACATATTCAAATAAACACACATGGGGAGAAGAAAATGTGGTGACCAGAGTTCGAACTCAAAATTTTATATAAAATGTCATCACAACCAAATCAATAGAAACCAATAGGCTCTAACAACAGGGACTAATCTTATAAAATGTAATTGTATAGTAATTAAGTGATATTTTACAGACAATATCATTAAATGTAGTGAAAATAATTAACCTTACATGAGTGATCTATAATTATTATATAAAATAATTTGAAAATGATGAATATTAAATTATTTAAATTTGTTCTTCACTTGTTTACTTTTTTTGCAGGGAAGTGAATGAGGAATATGGCAAGTACCTACGTGAAGTGGCAGACAAACTATTCAAAAGTTTGTCAACTGGTCTTGGGCTTGAAGAACATGAACTTAAGGAAGCTGCAGGTGGAGATGAGTTGATTCACTTGTTGAAAATCAACTACTACCCACCATGTCCAGTTCCTGATCTTGTTCTAGGTGTGCCTCCACACACAGATATGTCTTTTCTTACCATTTTGGTCCCCAATGAAGTGCAGGGTCTTCAAGCCTCTAGAGGTGGTCAATGGTATGATGTTAAGTATGTCCCTAATGCCCTTGTCATTCACATTGGTGACCAAATGGAGGTATGTATATATATACATCTTATCTTTGTATACTAATTAATGAAATTGTGCCTAAAAATGTGGTTGGCATAGTCTTTAAATAATAATCAACATATAAATATAAGCATACCCTTCAAAAAAAAAAATATATATAAGCATCAATTGAATGTTAATGAGAATAAATATGAGAGAAATGTCTTTGATATTGTTGTATAATTAACTTGGCCACGGATACAGCTCTATCAACATCATCTAGCAAGCAACAATTCATATGAAACCTGCAAAATAATAAACCGATATGTAATCTCAGGCGTGACAAAGTTATTGTTCTTAAAGATTTATCCGCTTAATAAACACAAATCCTCCGATGTTTAACATGTCCTTTTTGGTATGAATCATACCACATGCGACAAAATAGCTTGAATCTGAATGACCACATGAAACATAAACCTAGGAACTCAGTGTATTTGTTGGAGAGAAAAGGATTGTTATGTACTAAGAAAAATGCAAATGAGAGAGTATGTATATGTGTGTACTGTCTTGAGTTACTAGCAATTATTATATATTATATATATATATATATTGGCAAGTTAGTGCTTTCTTGAAAAACAGAGGAAGGGTAGTGTGAGTGGTTGTTGGATGTGTGTAAAATAAACGTGATCAACAAACAGCAACTAAGGGCACTTTAGCAAATAAGCATAAGTTGCACGTAAATAACCTAATAACAATAAAAATGAGTTCCCTAAAAAAAAAAAATCAAAATTATTTATGTAACAAATTTATACTACCCAATTGATTATGAGAAACTAATTACAAATTTTGAATGATGAAATCATGATATTTTATTTTATAGATACTGAGCAATGGAAAATATAAGGCTGTATTGCACAGAACAACTGTAAACAAAGATGAGACAAGAATGTCGTGGCCAGTGTTCATAGAGCCCAAGCCAGAACAAGAAGTTGGTCCTCACCCAAAGTTTGTTAACCAAGACAATATTCCTCCAAAGTACAAAACAAAGAAATATAAGGATTATCTTTATTGTAAGCTTAATAAGATCCCTCAGTGA

Protein sequence

>MS.gene74017.t1

MFLRSETESPGTTTVQGVKLEVPIIDFSNPDKGKIQNEIMEASTKWGMFQIVNHEIPNEVIRKLQSVGKEFFELPQDEKEVIAKPVGSDSLEGYGTKLQKEVNGKKGWVDHLFHIIWPPSSINYRFWPTNPASYREVNEEYGKYLREVADKLFKSLSTGLGLEEHELKEAAGGDELIHLLKINYYPPCPVPDLVLGVPPHTDMSFLTILVPNEVQGLQASRGGQWYDVKYVPNALVIHIGDQMEILSNGKYKAVLHRTTVNKDETRMSWPVFIEPKPEQEVGPHPKFVNQDNIPPKYKTKKYKDYLYCKLNKIPQ