Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74119.t1 | GAU33112.1 | 79.1 | 621 | 126 | 3 | 10 | 629 | 8 | 625 | 5.90E-276 | 959.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74119.t1 | P09189 | 64.4 | 623 | 215 | 5 | 11 | 630 | 1 | 619 | 1.1e-222 | 774.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74119.t1 | A0A2Z6N8I6 | 79.1 | 621 | 126 | 3 | 10 | 629 | 8 | 625 | 4.2e-276 | 959.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene74119 | 0.816893 | 4.37E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene74119 | 0.804003 | 2.66E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene74119 | 0.817633 | 2.98E-52 | -1.69E-46 |
| MS.gene05045 | MS.gene74119 | 0.831039 | 2.09E-55 | -1.69E-46 |
| MS.gene050559 | MS.gene74119 | 0.802708 | 4.93E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene74119 | 0.807236 | 5.58E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene74119 | 0.812408 | 4.30E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene74119 | 0.800916 | 1.15E-48 | -1.69E-46 |
| MS.gene051744 | MS.gene74119 | 0.854222 | 1.42E-61 | -1.69E-46 |
| MS.gene051957 | MS.gene74119 | 0.807655 | 4.55E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene74119 | 0.815251 | 1.02E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene74119 | 0.816534 | 5.26E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene74119 | 0.805191 | 1.50E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene74119 | 0.808646 | 2.80E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene74119 | 0.825871 | 3.70E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene74119 | 0.826425 | 2.73E-54 | -1.69E-46 |
| MS.gene053998 | MS.gene74119 | 0.804485 | 2.11E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene74119 | 0.825585 | 4.33E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene74119 | 0.829016 | 6.51E-55 | -1.69E-46 |
| MS.gene055260 | MS.gene74119 | 0.818279 | 2.13E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene74119 | 0.801157 | 1.03E-48 | -1.69E-46 |
| MS.gene055537 | MS.gene74119 | 0.800044 | 1.73E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene74119 | 0.806261 | 8.96E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene74119 | 0.851622 | 7.87E-61 | -1.69E-46 |
| MS.gene056366 | MS.gene74119 | 0.849575 | 2.96E-60 | -1.69E-46 |
| MS.gene056553 | MS.gene74119 | 0.804342 | 2.26E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene74119 | 0.806879 | 6.64E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene74119 | 0.806695 | 7.26E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene74119 | 0.806346 | 8.60E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene74119 | 0.823886 | 1.09E-53 | -1.69E-46 |
| MS.gene058829 | MS.gene74119 | 0.808612 | 2.84E-50 | -1.69E-46 |
| MS.gene05894 | MS.gene74119 | 0.812741 | 3.64E-51 | -1.69E-46 |
| MS.gene059015 | MS.gene74119 | 0.830159 | 3.44E-55 | -1.69E-46 |
| MS.gene059570 | MS.gene74119 | 0.820129 | 8.07E-53 | -1.69E-46 |
| MS.gene059625 | MS.gene74119 | 0.818014 | 2.45E-52 | -1.69E-46 |
| MS.gene06094 | MS.gene74119 | 0.801273 | 9.73E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74119.t1 | MTR_7g025720 | 78.387 | 620 | 132 | 1 | 11 | 630 | 1 | 618 | 0.0 | 993 |
| MS.gene74119.t1 | MTR_7g025760 | 76.651 | 621 | 142 | 2 | 11 | 630 | 1 | 619 | 0.0 | 987 |
| MS.gene74119.t1 | MTR_8g032650 | 77.120 | 625 | 141 | 1 | 11 | 635 | 1 | 623 | 0.0 | 983 |
| MS.gene74119.t1 | MTR_7g025630 | 78.548 | 620 | 117 | 3 | 11 | 630 | 1 | 604 | 0.0 | 972 |
| MS.gene74119.t1 | MTR_7g026030 | 74.240 | 625 | 159 | 1 | 11 | 635 | 1 | 623 | 0.0 | 961 |
| MS.gene74119.t1 | MTR_7g025740 | 73.259 | 632 | 162 | 2 | 11 | 635 | 1 | 632 | 0.0 | 946 |
| MS.gene74119.t1 | MTR_7g025620 | 73.453 | 614 | 161 | 1 | 11 | 624 | 1 | 612 | 0.0 | 927 |
| MS.gene74119.t1 | MTR_7g078190 | 72.552 | 623 | 167 | 3 | 11 | 630 | 1 | 622 | 0.0 | 915 |
| MS.gene74119.t1 | MTR_7g025790 | 72.123 | 617 | 170 | 1 | 11 | 627 | 1 | 615 | 0.0 | 910 |
| MS.gene74119.t1 | MTR_7g078210 | 71.704 | 622 | 173 | 2 | 11 | 630 | 1 | 621 | 0.0 | 896 |
| MS.gene74119.t1 | MTR_7g024030 | 71.336 | 614 | 174 | 1 | 11 | 624 | 1 | 612 | 0.0 | 893 |
| MS.gene74119.t1 | MTR_7g025820 | 72.483 | 596 | 161 | 2 | 11 | 605 | 1 | 594 | 0.0 | 887 |
| MS.gene74119.t1 | MTR_7g025260 | 71.875 | 576 | 157 | 3 | 63 | 635 | 23 | 596 | 0.0 | 843 |
| MS.gene74119.t1 | MTR_7g021440 | 66.232 | 613 | 204 | 2 | 11 | 622 | 1 | 611 | 0.0 | 827 |
| MS.gene74119.t1 | MTR_2g032550 | 65.909 | 616 | 205 | 4 | 16 | 628 | 7 | 620 | 0.0 | 824 |
| MS.gene74119.t1 | MTR_7g026110 | 64.975 | 611 | 211 | 2 | 11 | 621 | 1 | 608 | 0.0 | 818 |
| MS.gene74119.t1 | MTR_7g026090 | 66.179 | 615 | 203 | 3 | 11 | 624 | 1 | 611 | 0.0 | 815 |
| MS.gene74119.t1 | MTR_5g066800 | 64.013 | 628 | 212 | 3 | 11 | 626 | 1 | 626 | 0.0 | 811 |
| MS.gene74119.t1 | MTR_7g451380 | 63.974 | 619 | 218 | 3 | 11 | 626 | 1 | 617 | 0.0 | 804 |
| MS.gene74119.t1 | MTR_4g063720 | 64.869 | 612 | 208 | 5 | 11 | 619 | 1 | 608 | 0.0 | 802 |
| MS.gene74119.t1 | MTR_7g024580 | 63.884 | 623 | 218 | 5 | 11 | 630 | 1 | 619 | 0.0 | 801 |
| MS.gene74119.t1 | MTR_7g025770 | 64.763 | 613 | 212 | 3 | 11 | 621 | 1 | 611 | 0.0 | 801 |
| MS.gene74119.t1 | MTR_4g063710 | 64.542 | 612 | 210 | 5 | 11 | 619 | 1 | 608 | 0.0 | 800 |
| MS.gene74119.t1 | MTR_7g099680 | 63.116 | 629 | 225 | 5 | 11 | 636 | 1 | 625 | 0.0 | 800 |
| MS.gene74119.t1 | MTR_7g024390 | 64.918 | 610 | 207 | 5 | 11 | 617 | 1 | 606 | 0.0 | 799 |
| MS.gene74119.t1 | MTR_2g038260 | 63.813 | 619 | 218 | 5 | 11 | 626 | 1 | 616 | 0.0 | 798 |
| MS.gene74119.t1 | MTR_7g011590 | 65.557 | 601 | 193 | 2 | 11 | 611 | 1 | 587 | 0.0 | 791 |
| MS.gene74119.t1 | MTR_4g130540 | 62.783 | 618 | 223 | 5 | 16 | 630 | 5 | 618 | 0.0 | 784 |
| MS.gene74119.t1 | MTR_2g022050 | 64.943 | 619 | 212 | 4 | 11 | 626 | 1 | 617 | 0.0 | 782 |
| MS.gene74119.t1 | MTR_7g026170 | 62.419 | 620 | 229 | 3 | 11 | 628 | 1 | 618 | 0.0 | 779 |
| MS.gene74119.t1 | MTR_4g079590 | 63.711 | 609 | 217 | 3 | 11 | 617 | 1 | 607 | 0.0 | 777 |
| MS.gene74119.t1 | MTR_7g029415 | 63.072 | 612 | 221 | 3 | 19 | 628 | 16 | 624 | 0.0 | 776 |
| MS.gene74119.t1 | MTR_2g437440 | 63.005 | 619 | 206 | 5 | 11 | 626 | 1 | 599 | 0.0 | 767 |
| MS.gene74119.t1 | MTR_8g103930 | 61.648 | 631 | 210 | 6 | 11 | 627 | 1 | 613 | 0.0 | 766 |
| MS.gene74119.t1 | MTR_2g032580 | 62.258 | 620 | 196 | 7 | 11 | 626 | 1 | 586 | 0.0 | 763 |
| MS.gene74119.t1 | MTR_7g074460 | 62.197 | 619 | 213 | 3 | 11 | 628 | 1 | 599 | 0.0 | 761 |
| MS.gene74119.t1 | MTR_2g038270 | 62.279 | 623 | 220 | 6 | 11 | 621 | 1 | 620 | 0.0 | 758 |
| MS.gene74119.t1 | MTR_7g026130 | 62.255 | 612 | 222 | 3 | 11 | 616 | 1 | 609 | 0.0 | 741 |
| MS.gene74119.t1 | MTR_7g026140 | 60.261 | 614 | 222 | 5 | 11 | 621 | 1 | 595 | 0.0 | 729 |
| MS.gene74119.t1 | MTR_4g027145 | 58.861 | 632 | 244 | 5 | 11 | 628 | 1 | 630 | 0.0 | 725 |
| MS.gene74119.t1 | MTR_1g017130 | 60.131 | 612 | 202 | 3 | 11 | 621 | 1 | 571 | 0.0 | 724 |
| MS.gene74119.t1 | MTR_6g033760 | 56.894 | 631 | 257 | 6 | 11 | 630 | 1 | 627 | 0.0 | 686 |
| MS.gene74119.t1 | MTR_6g033850 | 56.522 | 621 | 263 | 5 | 11 | 628 | 1 | 617 | 0.0 | 684 |
| MS.gene74119.t1 | MTR_7g007000 | 57.003 | 614 | 216 | 5 | 11 | 621 | 1 | 569 | 0.0 | 676 |
| MS.gene74119.t1 | MTR_6g033870 | 56.543 | 619 | 259 | 5 | 18 | 629 | 9 | 624 | 0.0 | 669 |
| MS.gene74119.t1 | MTR_7g451360 | 55.089 | 619 | 214 | 4 | 11 | 626 | 1 | 558 | 0.0 | 659 |
| MS.gene74119.t1 | MTR_1g041565 | 56.860 | 605 | 187 | 7 | 19 | 621 | 5 | 537 | 0.0 | 651 |
| MS.gene74119.t1 | MTR_6g033955 | 58.276 | 580 | 231 | 5 | 18 | 590 | 8 | 583 | 0.0 | 651 |
| MS.gene74119.t1 | MTR_6g033820 | 54.927 | 619 | 268 | 5 | 18 | 629 | 8 | 622 | 0.0 | 647 |
| MS.gene74119.t1 | MTR_2g017730 | 56.228 | 578 | 234 | 8 | 19 | 587 | 8 | 575 | 0.0 | 635 |
| MS.gene74119.t1 | MTR_7g035155 | 53.387 | 620 | 231 | 5 | 11 | 628 | 1 | 564 | 0.0 | 630 |
| MS.gene74119.t1 | MTR_8g099945 | 54.315 | 591 | 257 | 9 | 17 | 602 | 36 | 618 | 0.0 | 621 |
| MS.gene74119.t1 | MTR_8g099795 | 54.484 | 591 | 256 | 9 | 17 | 602 | 36 | 618 | 0.0 | 619 |
| MS.gene74119.t1 | MTR_2g032160 | 73.333 | 375 | 100 | 0 | 11 | 385 | 1 | 375 | 0.0 | 602 |
| MS.gene74119.t1 | MTR_6g033800 | 53.802 | 526 | 238 | 4 | 105 | 628 | 4 | 526 | 0.0 | 548 |
| MS.gene74119.t1 | MTR_4g063720 | 50.654 | 612 | 224 | 13 | 11 | 619 | 1 | 537 | 0.0 | 540 |
| MS.gene74119.t1 | MTR_2g040370 | 68.274 | 394 | 121 | 2 | 13 | 406 | 1023 | 1412 | 1.71e-177 | 550 |
| MS.gene74119.t1 | MTR_2g040370 | 66.495 | 388 | 125 | 3 | 13 | 399 | 1407 | 1790 | 5.39e-161 | 505 |
| MS.gene74119.t1 | MTR_2g040370 | 68.274 | 394 | 121 | 2 | 13 | 406 | 1023 | 1412 | 2.44e-177 | 549 |
| MS.gene74119.t1 | MTR_2g040370 | 65.337 | 401 | 134 | 3 | 13 | 412 | 1407 | 1803 | 5.46e-162 | 508 |
| MS.gene74119.t1 | MTR_2g040160 | 66.584 | 401 | 129 | 3 | 11 | 410 | 1101 | 1497 | 6.12e-175 | 537 |
| MS.gene74119.t1 | MTR_2g040260 | 65.087 | 401 | 135 | 3 | 11 | 410 | 1030 | 1426 | 4.87e-174 | 535 |
| MS.gene74119.t1 | MTR_2g040220 | 63.939 | 391 | 137 | 2 | 7 | 395 | 1006 | 1394 | 1.27e-166 | 516 |
| MS.gene74119.t1 | MTR_2g040220 | 49.474 | 95 | 39 | 3 | 461 | 546 | 1399 | 1493 | 1.27e-16 | 84.7 |
| MS.gene74119.t1 | MTR_2g040350 | 64.736 | 397 | 131 | 4 | 19 | 410 | 820 | 1212 | 6.06e-166 | 507 |
| MS.gene74119.t1 | MTR_2g040350 | 64.736 | 397 | 131 | 4 | 19 | 410 | 1038 | 1430 | 3.32e-164 | 508 |
| MS.gene74119.t1 | MTR_2g010020 | 46.953 | 558 | 270 | 12 | 20 | 570 | 57 | 595 | 4.10e-157 | 468 |
| MS.gene74119.t1 | MTR_2g010020 | 46.953 | 558 | 270 | 12 | 20 | 570 | 58 | 596 | 5.41e-157 | 468 |
| MS.gene74119.t1 | MTR_1g077230 | 74.823 | 282 | 71 | 0 | 11 | 292 | 1 | 282 | 8.82e-156 | 450 |
| MS.gene74119.t1 | MTR_4g092920 | 46.237 | 558 | 275 | 12 | 20 | 570 | 54 | 593 | 1.91e-154 | 461 |
| MS.gene74119.t1 | MTR_2g005690 | 43.243 | 592 | 310 | 13 | 20 | 604 | 72 | 644 | 1.47e-145 | 439 |
| MS.gene74119.t1 | MTR_6g034005 | 46.394 | 513 | 248 | 9 | 92 | 591 | 2 | 500 | 1.80e-139 | 423 |
| MS.gene74119.t1 | MTR_4g088515 | 52.791 | 430 | 116 | 6 | 19 | 447 | 276 | 619 | 1.68e-134 | 407 |
| MS.gene74119.t1 | MTR_7g026080 | 73.469 | 245 | 65 | 0 | 11 | 255 | 1 | 245 | 4.74e-132 | 388 |
| MS.gene74119.t1 | MTR_4g092920 | 45.455 | 473 | 236 | 10 | 104 | 570 | 3 | 459 | 1.79e-126 | 384 |
| MS.gene74119.t1 | MTR_7g026050 | 53.784 | 370 | 139 | 4 | 255 | 621 | 1 | 341 | 2.77e-122 | 367 |
| MS.gene74119.t1 | MTR_2g031670 | 71.304 | 230 | 66 | 0 | 31 | 260 | 43 | 272 | 2.06e-119 | 359 |
| MS.gene74119.t1 | MTR_2g031670 | 86.207 | 58 | 8 | 0 | 362 | 419 | 283 | 340 | 3.17e-25 | 107 |
| MS.gene74119.t1 | MTR_6g033810 | 50.459 | 327 | 113 | 2 | 101 | 426 | 13 | 291 | 9.53e-102 | 311 |
| MS.gene74119.t1 | MTR_6g033855 | 44.652 | 374 | 120 | 4 | 101 | 474 | 13 | 299 | 4.67e-96 | 298 |
| MS.gene74119.t1 | MTR_5g097190 | 55.642 | 257 | 67 | 3 | 10 | 266 | 149 | 358 | 4.22e-90 | 284 |
| MS.gene74119.t1 | MTR_6g478100 | 63.208 | 212 | 64 | 2 | 48 | 259 | 10 | 207 | 1.39e-85 | 271 |
| MS.gene74119.t1 | MTR_1g077240 | 54.209 | 297 | 125 | 4 | 332 | 626 | 1 | 288 | 4.85e-83 | 263 |
| MS.gene74119.t1 | MTR_1207s0010 | 63.636 | 176 | 63 | 1 | 118 | 293 | 1 | 175 | 1.58e-72 | 231 |
| MS.gene74119.t1 | MTR_5g006180 | 33.069 | 505 | 296 | 14 | 18 | 505 | 28 | 507 | 1.99e-70 | 238 |
| MS.gene74119.t1 | MTR_4g012050 | 32.880 | 441 | 277 | 6 | 20 | 446 | 4 | 439 | 6.76e-69 | 240 |
| MS.gene74119.t1 | MTR_2g102180 | 32.045 | 440 | 282 | 6 | 20 | 446 | 4 | 439 | 2.97e-68 | 239 |
| MS.gene74119.t1 | MTR_3g051300 | 26.647 | 683 | 427 | 15 | 20 | 634 | 4 | 680 | 7.70e-65 | 228 |
| MS.gene74119.t1 | MTR_5g092570 | 26.036 | 676 | 418 | 16 | 20 | 626 | 4 | 666 | 6.31e-64 | 225 |
| MS.gene74119.t1 | MTR_5g090110 | 31.755 | 507 | 294 | 16 | 10 | 497 | 16 | 489 | 2.88e-58 | 205 |
| MS.gene74119.t1 | MTR_3g081170 | 33.085 | 402 | 247 | 7 | 20 | 403 | 27 | 424 | 7.20e-58 | 210 |
| MS.gene74119.t1 | MTR_4g115780 | 32.567 | 522 | 317 | 15 | 18 | 514 | 139 | 650 | 3.82e-56 | 202 |
| MS.gene74119.t1 | MTR_7g026180 | 74.790 | 119 | 30 | 0 | 88 | 206 | 23 | 141 | 1.66e-55 | 192 |
| MS.gene74119.t1 | MTR_7g026180 | 33.333 | 219 | 113 | 5 | 412 | 628 | 144 | 331 | 1.53e-20 | 94.0 |
| MS.gene74119.t1 | MTR_4g107920 | 29.550 | 511 | 322 | 16 | 18 | 510 | 19 | 509 | 3.72e-51 | 186 |
| MS.gene74119.t1 | MTR_6g033910 | 42.396 | 217 | 74 | 3 | 77 | 291 | 12 | 179 | 1.72e-47 | 165 |
| MS.gene74119.t1 | MTR_5g005870 | 37.755 | 294 | 166 | 7 | 301 | 589 | 61 | 342 | 2.14e-47 | 172 |
| MS.gene74119.t1 | MTR_1g116250 | 41.603 | 262 | 109 | 6 | 358 | 617 | 60 | 279 | 4.62e-46 | 165 |
| MS.gene74119.t1 | MTR_5g005890 | 38.767 | 227 | 88 | 4 | 84 | 309 | 5 | 181 | 5.01e-44 | 155 |
| MS.gene74119.t1 | MTR_2g040355 | 30.524 | 439 | 144 | 11 | 199 | 636 | 2 | 280 | 3.04e-43 | 157 |
| MS.gene74119.t1 | MTR_7g074540 | 43.564 | 202 | 111 | 2 | 427 | 627 | 1 | 200 | 4.96e-43 | 154 |
| MS.gene74119.t1 | MTR_7g451390 | 42.077 | 183 | 104 | 2 | 446 | 626 | 7 | 189 | 1.28e-33 | 127 |
| MS.gene74119.t1 | MTR_4g027235 | 68.000 | 75 | 24 | 0 | 11 | 85 | 1 | 75 | 3.90e-31 | 116 |
| MS.gene74119.t1 | MTR_4g027085 | 68.000 | 75 | 24 | 0 | 11 | 85 | 1 | 75 | 3.90e-31 | 116 |
| MS.gene74119.t1 | MTR_1g068900 | 45.455 | 143 | 78 | 0 | 437 | 579 | 23 | 165 | 1.61e-29 | 115 |
| MS.gene74119.t1 | MTR_6g033805 | 73.973 | 73 | 17 | 1 | 11 | 83 | 1 | 71 | 2.91e-29 | 111 |
| MS.gene74119.t1 | MTR_7g026190 | 57.778 | 90 | 29 | 2 | 302 | 391 | 13 | 93 | 1.86e-24 | 102 |
| MS.gene74119.t1 | MTR_7g026190 | 47.297 | 74 | 39 | 0 | 509 | 582 | 94 | 167 | 1.01e-13 | 70.9 |
| MS.gene74119.t1 | MTR_2g017710 | 32.692 | 260 | 86 | 7 | 235 | 490 | 17 | 191 | 1.10e-23 | 101 |
| MS.gene74119.t1 | MTR_7g026095 | 61.538 | 65 | 24 | 1 | 96 | 160 | 187 | 250 | 1.73e-18 | 87.8 |
| MS.gene74119.t1 | MTR_7g026095 | 40.909 | 88 | 52 | 0 | 493 | 580 | 256 | 343 | 4.97e-13 | 71.2 |
| MS.gene74119.t1 | MTR_7g021430 | 53.425 | 73 | 34 | 0 | 225 | 297 | 1 | 73 | 2.73e-18 | 84.0 |
| MS.gene74119.t1 | MTR_7g025680 | 84.848 | 33 | 5 | 0 | 20 | 52 | 10 | 42 | 6.96e-13 | 63.9 |
| MS.gene74119.t1 | MTR_6g033815 | 54.386 | 57 | 26 | 0 | 535 | 591 | 1 | 57 | 1.87e-11 | 61.6 |
| MS.gene74119.t1 | MTR_4g115860 | 38.542 | 96 | 55 | 3 | 407 | 501 | 29 | 121 | 7.29e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74119.t1 | AT3G12580 | 64.320 | 625 | 216 | 5 | 11 | 632 | 1 | 621 | 0.0 | 814 |
| MS.gene74119.t1 | AT5G02500 | 64.216 | 612 | 212 | 5 | 11 | 619 | 1 | 608 | 0.0 | 798 |
| MS.gene74119.t1 | AT5G02490 | 63.399 | 612 | 217 | 5 | 11 | 619 | 1 | 608 | 0.0 | 789 |
| MS.gene74119.t1 | AT3G09440 | 63.235 | 612 | 218 | 5 | 11 | 619 | 1 | 608 | 0.0 | 779 |
| MS.gene74119.t1 | AT3G09440 | 63.235 | 612 | 218 | 5 | 11 | 619 | 1 | 608 | 0.0 | 779 |
| MS.gene74119.t1 | AT3G09440 | 63.235 | 612 | 218 | 5 | 11 | 619 | 1 | 608 | 0.0 | 779 |
| MS.gene74119.t1 | AT3G09440 | 63.235 | 612 | 218 | 5 | 11 | 619 | 1 | 608 | 0.0 | 779 |
| MS.gene74119.t1 | AT1G16030 | 62.602 | 615 | 223 | 5 | 19 | 630 | 8 | 618 | 0.0 | 778 |
| MS.gene74119.t1 | AT1G56410 | 61.316 | 623 | 232 | 6 | 11 | 630 | 1 | 617 | 0.0 | 761 |
| MS.gene74119.t1 | AT5G42020 | 55.263 | 608 | 259 | 9 | 17 | 619 | 35 | 634 | 0.0 | 641 |
| MS.gene74119.t1 | AT5G28540 | 55.263 | 608 | 259 | 9 | 17 | 619 | 35 | 634 | 0.0 | 641 |
| MS.gene74119.t1 | AT5G42020 | 55.263 | 608 | 259 | 9 | 17 | 619 | 40 | 639 | 0.0 | 639 |
| MS.gene74119.t1 | AT1G09080 | 53.548 | 620 | 276 | 8 | 12 | 627 | 35 | 646 | 0.0 | 611 |
| MS.gene74119.t1 | AT1G09080 | 53.548 | 620 | 276 | 8 | 12 | 627 | 45 | 656 | 0.0 | 610 |
| MS.gene74119.t1 | AT5G02500 | 72.751 | 389 | 104 | 1 | 11 | 399 | 1 | 387 | 0.0 | 597 |
| MS.gene74119.t1 | AT5G02500 | 39.785 | 93 | 56 | 0 | 527 | 619 | 386 | 478 | 2.34e-13 | 73.6 |
| MS.gene74119.t1 | AT5G42020 | 50.082 | 607 | 237 | 10 | 17 | 619 | 35 | 579 | 0.0 | 552 |
| MS.gene74119.t1 | AT5G09590 | 46.512 | 559 | 272 | 12 | 20 | 570 | 60 | 599 | 7.45e-153 | 457 |
| MS.gene74119.t1 | AT4G37910 | 45.095 | 581 | 289 | 13 | 2 | 570 | 32 | 594 | 1.85e-149 | 448 |
| MS.gene74119.t1 | AT4G37910 | 45.095 | 581 | 289 | 13 | 2 | 570 | 32 | 594 | 1.85e-149 | 448 |
| MS.gene74119.t1 | AT5G49910 | 42.444 | 622 | 331 | 15 | 20 | 633 | 81 | 683 | 2.54e-145 | 439 |
| MS.gene74119.t1 | AT4G24280 | 44.041 | 579 | 298 | 14 | 20 | 591 | 81 | 640 | 1.37e-143 | 434 |
| MS.gene74119.t1 | AT1G11660 | 27.560 | 664 | 417 | 12 | 20 | 630 | 4 | 656 | 2.33e-74 | 254 |
| MS.gene74119.t1 | AT1G11660 | 27.560 | 664 | 417 | 12 | 20 | 630 | 4 | 656 | 2.33e-74 | 254 |
| MS.gene74119.t1 | AT1G11660 | 27.560 | 664 | 417 | 12 | 20 | 630 | 4 | 656 | 2.33e-74 | 254 |
| MS.gene74119.t1 | AT2G32120 | 32.946 | 516 | 311 | 14 | 18 | 518 | 29 | 524 | 2.44e-70 | 238 |
| MS.gene74119.t1 | AT2G32120 | 32.946 | 516 | 311 | 14 | 18 | 518 | 29 | 524 | 2.44e-70 | 238 |
| MS.gene74119.t1 | AT1G79920 | 32.653 | 441 | 278 | 6 | 20 | 446 | 4 | 439 | 4.66e-70 | 241 |
| MS.gene74119.t1 | AT1G79920 | 32.653 | 441 | 278 | 6 | 20 | 446 | 4 | 439 | 5.32e-70 | 241 |
| MS.gene74119.t1 | AT1G79920 | 32.653 | 441 | 278 | 6 | 20 | 446 | 4 | 439 | 5.32e-70 | 241 |
| MS.gene74119.t1 | AT1G79920 | 32.653 | 441 | 278 | 6 | 20 | 446 | 4 | 439 | 5.32e-70 | 241 |
| MS.gene74119.t1 | AT1G79930 | 32.045 | 440 | 282 | 5 | 20 | 446 | 4 | 439 | 1.28e-69 | 241 |
| MS.gene74119.t1 | AT1G79930 | 32.045 | 440 | 282 | 5 | 20 | 446 | 4 | 439 | 4.23e-69 | 241 |
| MS.gene74119.t1 | AT1G11660 | 27.911 | 627 | 390 | 11 | 57 | 630 | 2 | 619 | 2.85e-68 | 236 |
| MS.gene74119.t1 | AT4G16660 | 28.327 | 526 | 332 | 12 | 16 | 505 | 23 | 539 | 1.64e-58 | 211 |
| MS.gene74119.t1 | AT4G16660 | 28.190 | 525 | 334 | 11 | 16 | 505 | 47 | 563 | 1.83e-58 | 211 |
Find 126 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAACCTCCTCAAGGCTTT+TGG | 0.157336 | 7.4:-75886933 | None:intergenic |
| TATACTGTTGTGGCCCTTTA+AGG | 0.172434 | 7.4:+75886413 | MS.gene74119:CDS |
| AGCAATTTCACCTGCATCTT+TGG | 0.215804 | 7.4:-75886631 | None:intergenic |
| TGTTTCTCTTCTCACAATTA+AGG | 0.222042 | 7.4:+75886782 | MS.gene74119:CDS |
| TCCTTGTTGGTGGTTCTTCT+AGG | 0.249840 | 7.4:+75887168 | MS.gene74119:CDS |
| CTTACTCTTGCGTTGGAGTA+TGG | 0.256437 | 7.4:+75885926 | MS.gene74119:CDS |
| TTTCAAGTCAAGGCCACTTC+TGG | 0.262714 | 7.4:+75886813 | MS.gene74119:CDS |
| CCTTGAAATTGTCAGCTTCC+TGG | 0.269169 | 7.4:-75887718 | None:intergenic |
| ATTACAATAACTAATGAAAA+TGG | 0.292577 | 7.4:+75887662 | MS.gene74119:CDS |
| GACAGTGTTGGTTGGGTTAG+AGG | 0.297455 | 7.4:-75886070 | None:intergenic |
| AACACCAGCAATGACCTTAA+AGG | 0.304651 | 7.4:-75886427 | None:intergenic |
| TGTAATAACTGCCTCACTTT+AGG | 0.312891 | 7.4:-75887194 | None:intergenic |
| TAGAGCATCTATGTCAATTA+TGG | 0.318042 | 7.4:-75887003 | None:intergenic |
| AGAACTTTCTTATATCAATA+AGG | 0.318987 | 7.4:+75886980 | MS.gene74119:CDS |
| GATTAATTCTGCAATGATAA+AGG | 0.326851 | 7.4:+75887868 | MS.gene74119:CDS |
| TGGCCCTTTAAGGTCATTGC+TGG | 0.328178 | 7.4:+75886423 | MS.gene74119:CDS |
| TAAAGTGAGGCAGTTATTAC+AGG | 0.333837 | 7.4:+75887196 | MS.gene74119:CDS |
| AACCCAACCAACACTGTCTT+TGG | 0.338640 | 7.4:+75886075 | MS.gene74119:CDS |
| CCTGATGAGGCTGTTGCTTA+TGG | 0.340665 | 7.4:+75887257 | MS.gene74119:CDS |
| TAAGTTTGAGCAACTGAATA+TGG | 0.355597 | 7.4:+75887064 | MS.gene74119:CDS |
| CAGCATCACCAACCAACCTT+TGG | 0.359278 | 7.4:-75886032 | None:intergenic |
| ATCATAGCTGATATTTCTTC+GGG | 0.360547 | 7.4:-75886504 | None:intergenic |
| AATCATAGCTGATATTTCTT+CGG | 0.361993 | 7.4:-75886505 | None:intergenic |
| CAGTATATCATTCTGAACTA+TGG | 0.370015 | 7.4:-75886397 | None:intergenic |
| ACATTCCGCAGTACCAAGTT+TGG | 0.372363 | 7.4:-75887326 | None:intergenic |
| AGTTGAAGCAAGAAATGCTT+TGG | 0.381737 | 7.4:+75887766 | MS.gene74119:CDS |
| TGCTTATGGTGCAGCTGTCC+AGG | 0.386356 | 7.4:+75887271 | MS.gene74119:CDS |
| CCATAAGCAACAGCCTCATC+AGG | 0.392319 | 7.4:-75887257 | None:intergenic |
| CGATGATCGTTGTGAAATAC+AGG | 0.394587 | 7.4:+75886460 | MS.gene74119:CDS |
| TTGAAATAGCAATGAATTCA+CGG | 0.402794 | 7.4:+75885836 | None:intergenic |
| TAAACTTGTGTCTTCTTGAA+TGG | 0.405865 | 7.4:-75887422 | None:intergenic |
| AGTTGAAATTATGGTTTATG+AGG | 0.406537 | 7.4:+75887478 | MS.gene74119:CDS |
| AAGGGAGAAAGTTTGATTGA+TGG | 0.409606 | 7.4:+75887887 | MS.gene74119:CDS |
| CACTAAGAATGTTCCAAACT+TGG | 0.411003 | 7.4:+75887313 | MS.gene74119:CDS |
| AATTTCACCTGCATCTTTGG+TGG | 0.413962 | 7.4:-75886628 | None:intergenic |
| ACTGCAGCTGCTCTTGCATA+TGG | 0.416475 | 7.4:+75886687 | MS.gene74119:CDS |
| TACCAAAGACAGTGTTGGTT+GGG | 0.419201 | 7.4:-75886077 | None:intergenic |
| TTCATCTTTGATCTCGGTGG+TGG | 0.426074 | 7.4:+75886750 | MS.gene74119:CDS |
| AGCATCACCAACCAACCTTT+GGG | 0.426820 | 7.4:-75886031 | None:intergenic |
| AAAGATGCAGGTGAAATTGC+TGG | 0.431586 | 7.4:+75886633 | MS.gene74119:CDS |
| AGAGATTGAGAGAATGATCC+AGG | 0.439899 | 7.4:+75887700 | MS.gene74119:CDS |
| AATTCACGGTTTCATTCTCT+TGG | 0.441617 | 7.4:+75885850 | MS.gene74119:CDS |
| ATTAATTCTGCAATGATAAA+GGG | 0.444399 | 7.4:+75887869 | MS.gene74119:CDS |
| ACACCAGCAATGACCTTAAA+GGG | 0.451256 | 7.4:-75886426 | None:intergenic |
| GTAGATGATGTAGTCCTTGT+TGG | 0.452511 | 7.4:+75887155 | MS.gene74119:CDS |
| GTAATCACTGCATTCTCAAC+AGG | 0.458864 | 7.4:-75886570 | None:intergenic |
| ATGAAAATGGAAGATTATCA+AGG | 0.459072 | 7.4:+75887675 | MS.gene74119:CDS |
| TATTATACCCCTCAGGTTGA+AGG | 0.476336 | 7.4:+75887443 | MS.gene74119:CDS |
| TTATGAGTGTGGTGATTCCT+AGG | 0.478815 | 7.4:+75887387 | MS.gene74119:CDS |
| TGAGAATCATTAAAATAAGC+AGG | 0.481016 | 7.4:-75886597 | None:intergenic |
| GGAAGCCCACGGGGAGCAAG+AGG | 0.482234 | 7.4:-75887557 | None:intergenic |
| GGACCTCTTTGAAAAGTGTA+TGG | 0.487372 | 7.4:+75887085 | MS.gene74119:CDS |
| CCAGGAAGCTGACAATTTCA+AGG | 0.491682 | 7.4:+75887718 | MS.gene74119:CDS |
| CTGTATTTCACAACGATCAT+CGG | 0.501741 | 7.4:-75886459 | None:intergenic |
| GTTGAAATTATGGTTTATGA+GGG | 0.502673 | 7.4:+75887479 | MS.gene74119:CDS |
| TCTTGCATAATTCCTTCCCT+TGG | 0.504090 | 7.4:-75887226 | None:intergenic |
| TTGTCTTGCAGATGCTAAGA+TGG | 0.509643 | 7.4:+75887121 | MS.gene74119:CDS |
| ATCATTAAAATAAGCAGGTA+CGG | 0.510353 | 7.4:-75886592 | None:intergenic |
| TACTTTGCTATAGATGCTAA+TGG | 0.512958 | 7.4:+75887590 | MS.gene74119:CDS |
| AATGGTACAGAAGTATTCCT+AGG | 0.513462 | 7.4:-75887404 | None:intergenic |
| AATGTTACTCCTTTGTCACT+TGG | 0.515190 | 7.4:+75887344 | MS.gene74119:CDS |
| AAGAACCAAGTTGACATTAG+TGG | 0.515239 | 7.4:+75886906 | MS.gene74119:CDS |
| TTTGATTGATGGCAACCAGC+AGG | 0.518662 | 7.4:+75887898 | MS.gene74119:CDS |
| AGAAGAGCCACCAAAGATGC+AGG | 0.521744 | 7.4:+75886621 | MS.gene74119:CDS |
| AAGTTCCTCTTGCTCCCCGT+GGG | 0.528868 | 7.4:+75887552 | MS.gene74119:CDS |
| GAAATCATACACAATGATCA+AGG | 0.529854 | 7.4:+75885970 | MS.gene74119:CDS |
| GGACGCCACTAATGTCAACT+TGG | 0.531186 | 7.4:-75886911 | None:intergenic |
| GTTGCGATCGGAATTGACCT+TGG | 0.535133 | 7.4:+75885898 | MS.gene74119:CDS |
| ATTCATTACCTTCAACCTGA+GGG | 0.545600 | 7.4:-75887451 | None:intergenic |
| ACAAGTTTATTATACCCCTC+AGG | 0.549663 | 7.4:+75887436 | MS.gene74119:CDS |
| GGTTGCGAAATTCTTGCGAA+AGG | 0.551964 | 7.4:+75886949 | MS.gene74119:CDS |
| ACTGGATCCCAAAGGTTGGT+TGG | 0.553128 | 7.4:+75886024 | MS.gene74119:CDS |
| AAAGTTCCTCTTGCTCCCCG+TGG | 0.555857 | 7.4:+75887551 | MS.gene74119:CDS |
| GTTGCGAAATTCTTGCGAAA+GGG | 0.558548 | 7.4:+75886950 | MS.gene74119:CDS |
| ACTTTGTGAAAGAGTTTGAA+AGG | 0.558605 | 7.4:+75886883 | MS.gene74119:CDS |
| GACATAGATGCTCTATGTCA+AGG | 0.558830 | 7.4:+75887011 | MS.gene74119:CDS |
| GGATAATGTCTTTCAAGTCA+AGG | 0.559704 | 7.4:+75886803 | MS.gene74119:CDS |
| TACTGTGAGAGGAAGCCCAC+GGG | 0.560599 | 7.4:-75887567 | None:intergenic |
| GGAACGACTTACTCTTGCGT+TGG | 0.561375 | 7.4:+75885919 | MS.gene74119:CDS |
| CCAGTAAAAGCAACACAAGA+AGG | 0.566043 | 7.4:-75886006 | None:intergenic |
| GATGATGTAGTCCTTGTTGG+TGG | 0.568404 | 7.4:+75887158 | MS.gene74119:CDS |
| GCAAGTGAGAACAACTTGCT+TGG | 0.568418 | 7.4:+75887515 | MS.gene74119:CDS |
| AGAATTTCGCAACCTCCTCA+AGG | 0.576040 | 7.4:-75886940 | None:intergenic |
| AAACAGACGTATCTTCCTGC+TGG | 0.578169 | 7.4:-75887913 | None:intergenic |
| TAATCTTCTCTTTGTCTACA+CGG | 0.578212 | 7.4:-75887850 | None:intergenic |
| AGAGGACTTTGATAACAGAA+TGG | 0.578386 | 7.4:+75886854 | MS.gene74119:CDS |
| CGCAAGAGTAAGTCGTTCCA+AGG | 0.583763 | 7.4:-75885915 | None:intergenic |
| CTTCACTAAGCAAAACAGCC+TGG | 0.589833 | 7.4:-75887289 | None:intergenic |
| TGAAAATGGAAGATTATCAA+GGG | 0.589866 | 7.4:+75887676 | MS.gene74119:CDS |
| TATGCAAGAGCAGCTGCAGT+TGG | 0.590893 | 7.4:-75886684 | None:intergenic |
| GAGGTGTGTGTCTCCAGAAG+TGG | 0.591955 | 7.4:-75886826 | None:intergenic |
| TGAATTACCAAAGACAGTGT+TGG | 0.594114 | 7.4:-75886082 | None:intergenic |
| AGAAGGAGATATTATGAGTG+TGG | 0.595546 | 7.4:+75887376 | MS.gene74119:CDS |
| TTACCAAAGACAGTGTTGGT+TGG | 0.599364 | 7.4:-75886078 | None:intergenic |
| ACTTCTGTTCATCAATCACA+CGG | 0.600341 | 7.4:+75887039 | MS.gene74119:CDS |
| CTTCTAGGATTCCTAAAGTG+AGG | 0.600875 | 7.4:+75887183 | MS.gene74119:CDS |
| GTTTCATTCTCTTGGCACAA+TGG | 0.602754 | 7.4:+75885858 | MS.gene74119:CDS |
| ATAGCAAAGTATACTGTGAG+AGG | 0.602824 | 7.4:-75887578 | None:intergenic |
| AATTCATTACCTTCAACCTG+AGG | 0.604405 | 7.4:-75887452 | None:intergenic |
| CGTTGTGAAATACAGGGGCA+AGG | 0.607751 | 7.4:+75886467 | MS.gene74119:CDS |
| GAATGAACAGAACGATAGAG+TGG | 0.608601 | 7.4:+75885948 | MS.gene74119:CDS |
| TATATTAAACGTCTCTGCAG+TGG | 0.608686 | 7.4:+75887613 | MS.gene74119:CDS |
| AAATACGATGGAGTTGCGAT+CGG | 0.608848 | 7.4:+75885886 | MS.gene74119:CDS |
| TTCAGAATGATATACTGTTG+TGG | 0.614464 | 7.4:+75886403 | MS.gene74119:CDS |
| TCACTTGGTATCGATACAGA+AGG | 0.615030 | 7.4:+75887359 | MS.gene74119:CDS |
| AGACACACACCTCGGAGGAG+AGG | 0.619985 | 7.4:+75886836 | MS.gene74119:CDS |
| AAAAGCAACACAAGAAGGAG+TGG | 0.623125 | 7.4:-75886001 | None:intergenic |
| CATAAGCAACAGCCTCATCA+GGG | 0.634330 | 7.4:-75887256 | None:intergenic |
| GCTATGAATAAGATAAACAA+AGG | 0.638376 | 7.4:+75887977 | MS.gene74119:CDS |
| CAAGAGCATTAACCCTGATG+AGG | 0.639574 | 7.4:+75887244 | MS.gene74119:CDS |
| GGACTTTGATAACAGAATGG+TGG | 0.643649 | 7.4:+75886857 | MS.gene74119:CDS |
| TTCATTACCTTCAACCTGAG+GGG | 0.647883 | 7.4:-75887450 | None:intergenic |
| TCCTAGAAGAACCACCAACA+AGG | 0.656071 | 7.4:-75887169 | None:intergenic |
| GCGTCCCAAAAGCCTTGAGG+AGG | 0.663602 | 7.4:+75886928 | MS.gene74119:CDS |
| GTATCGATACCAAGTGACAA+AGG | 0.663687 | 7.4:-75887353 | None:intergenic |
| GTGGCGTCCCAAAAGCCTTG+AGG | 0.664119 | 7.4:+75886925 | MS.gene74119:CDS |
| GATGATCGTTGTGAAATACA+GGG | 0.665247 | 7.4:+75886461 | MS.gene74119:CDS |
| ACTTCTGGAGACACACACCT+CGG | 0.666959 | 7.4:+75886828 | MS.gene74119:CDS |
| CTTCTGTTCATCAATCACAC+GGG | 0.674858 | 7.4:+75887040 | MS.gene74119:CDS |
| ATGTTCCAAACTTGGTACTG+CGG | 0.679380 | 7.4:+75887321 | MS.gene74119:CDS |
| TATCAAAGTCCTCTCCTCCG+AGG | 0.688667 | 7.4:-75886845 | None:intergenic |
| ATACTGTGAGAGGAAGCCCA+CGG | 0.688739 | 7.4:-75887568 | None:intergenic |
| ATGATCGTTGTGAAATACAG+GGG | 0.709998 | 7.4:+75886462 | MS.gene74119:CDS |
| TCTGGAGACACACACCTCGG+AGG | 0.712848 | 7.4:+75886831 | MS.gene74119:CDS |
| TCTGCAGTGGAAGAAACCAG+TGG | 0.733951 | 7.4:+75887626 | MS.gene74119:CDS |
| ACTGTGAGAGGAAGCCCACG+GGG | 0.763418 | 7.4:-75887566 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATATTATAAACTTTAT+AGG | - | chr7.4:75886164-75886183 | None:intergenic | 10.0% |
| !! | ATTACAATAACTAATGAAAA+TGG | + | chr7.4:75887662-75887681 | MS.gene74119:CDS | 15.0% |
| !!! | TGAATTTTTAGTTGAAATTA+TGG | + | chr7.4:75887469-75887488 | MS.gene74119:CDS | 15.0% |
| !! | AGAACTTTCTTATATCAATA+AGG | + | chr7.4:75886980-75886999 | MS.gene74119:CDS | 20.0% |
| !! | ATTAATTCTGCAATGATAAA+GGG | + | chr7.4:75887869-75887888 | MS.gene74119:CDS | 20.0% |
| !!! | AATATTTTCATCTTTGATCT+CGG | + | chr7.4:75886744-75886763 | MS.gene74119:CDS | 20.0% |
| !!! | TGTTTTTGTAAACTTTTTGA+AGG | + | chr7.4:75887931-75887950 | MS.gene74119:CDS | 20.0% |
| ! | AATCATAGCTGATATTTCTT+CGG | - | chr7.4:75886508-75886527 | None:intergenic | 25.0% |
| ! | AGTTGAAATTATGGTTTATG+AGG | + | chr7.4:75887478-75887497 | MS.gene74119:CDS | 25.0% |
| ! | ATCATTAAAATAAGCAGGTA+CGG | - | chr7.4:75886595-75886614 | None:intergenic | 25.0% |
| ! | ATGAAAATGGAAGATTATCA+AGG | + | chr7.4:75887675-75887694 | MS.gene74119:CDS | 25.0% |
| ! | GATTAATTCTGCAATGATAA+AGG | + | chr7.4:75887868-75887887 | MS.gene74119:CDS | 25.0% |
| ! | GCTATGAATAAGATAAACAA+AGG | + | chr7.4:75887977-75887996 | MS.gene74119:CDS | 25.0% |
| ! | GTTGAAATTATGGTTTATGA+GGG | + | chr7.4:75887479-75887498 | MS.gene74119:CDS | 25.0% |
| ! | TGAAAATGGAAGATTATCAA+GGG | + | chr7.4:75887676-75887695 | MS.gene74119:CDS | 25.0% |
| ! | TGAGAATCATTAAAATAAGC+AGG | - | chr7.4:75886600-75886619 | None:intergenic | 25.0% |
| !!! | AATTTCATTTTTATTGCCAC+TGG | - | chr7.4:75887645-75887664 | None:intergenic | 25.0% |
| !!! | TCATTCTTTGATTTCTAGTT+AGG | + | chr7.4:75886119-75886138 | MS.gene74119:intron | 25.0% |
| ACAATGGAAGAAAAATACGA+TGG | + | chr7.4:75885874-75885893 | MS.gene74119:CDS | 30.0% | |
| ACTTTGTGAAAGAGTTTGAA+AGG | + | chr7.4:75886883-75886902 | MS.gene74119:CDS | 30.0% | |
| ATCATAGCTGATATTTCTTC+GGG | - | chr7.4:75886507-75886526 | None:intergenic | 30.0% | |
| CAGTATATCATTCTGAACTA+TGG | - | chr7.4:75886400-75886419 | None:intergenic | 30.0% | |
| GAAATCATACACAATGATCA+AGG | + | chr7.4:75885970-75885989 | MS.gene74119:CDS | 30.0% | |
| TAAACTTGTGTCTTCTTGAA+TGG | - | chr7.4:75887425-75887444 | None:intergenic | 30.0% | |
| TAAGTTTGAGCAACTGAATA+TGG | + | chr7.4:75887064-75887083 | MS.gene74119:CDS | 30.0% | |
| TAATCTTCTCTTTGTCTACA+CGG | - | chr7.4:75887853-75887872 | None:intergenic | 30.0% | |
| TGTTTCTCTTCTCACAATTA+AGG | + | chr7.4:75886782-75886801 | MS.gene74119:CDS | 30.0% | |
| TTCAGAATGATATACTGTTG+TGG | + | chr7.4:75886403-75886422 | MS.gene74119:CDS | 30.0% | |
| ! | TAATTTTTGCAGATGCAAAG+AGG | + | chr7.4:75886349-75886368 | MS.gene74119:intron | 30.0% |
| ! | TACTTTGCTATAGATGCTAA+TGG | + | chr7.4:75887590-75887609 | MS.gene74119:CDS | 30.0% |
| ! | TAGAGCATCTATGTCAATTA+TGG | - | chr7.4:75887006-75887025 | None:intergenic | 30.0% |
| ! | TATTACAGGAGTTTTTCCAA+GGG | + | chr7.4:75887210-75887229 | MS.gene74119:CDS | 30.0% |
| ! | TTATTACAGGAGTTTTTCCA+AGG | + | chr7.4:75887209-75887228 | MS.gene74119:CDS | 30.0% |
| AAGGGAGAAAGTTTGATTGA+TGG | + | chr7.4:75887887-75887906 | MS.gene74119:CDS | 35.0% | |
| AATGTTACTCCTTTGTCACT+TGG | + | chr7.4:75887344-75887363 | MS.gene74119:CDS | 35.0% | |
| AATTCACGGTTTCATTCTCT+TGG | + | chr7.4:75885850-75885869 | MS.gene74119:CDS | 35.0% | |
| AATTCATTACCTTCAACCTG+AGG | - | chr7.4:75887455-75887474 | None:intergenic | 35.0% | |
| ACAAGTTTATTATACCCCTC+AGG | + | chr7.4:75887436-75887455 | MS.gene74119:CDS | 35.0% | |
| ACTTCTGTTCATCAATCACA+CGG | + | chr7.4:75887039-75887058 | MS.gene74119:CDS | 35.0% | |
| AGAAGGAGATATTATGAGTG+TGG | + | chr7.4:75887376-75887395 | MS.gene74119:CDS | 35.0% | |
| AGTTGAAGCAAGAAATGCTT+TGG | + | chr7.4:75887766-75887785 | MS.gene74119:CDS | 35.0% | |
| ATAGCAAAGTATACTGTGAG+AGG | - | chr7.4:75887581-75887600 | None:intergenic | 35.0% | |
| ATGATCGTTGTGAAATACAG+GGG | + | chr7.4:75886462-75886481 | MS.gene74119:CDS | 35.0% | |
| ATTCATTACCTTCAACCTGA+GGG | - | chr7.4:75887454-75887473 | None:intergenic | 35.0% | |
| CACTAAGAATGTTCCAAACT+TGG | + | chr7.4:75887313-75887332 | MS.gene74119:CDS | 35.0% | |
| CTGTATTTCACAACGATCAT+CGG | - | chr7.4:75886462-75886481 | None:intergenic | 35.0% | |
| GATGATCGTTGTGAAATACA+GGG | + | chr7.4:75886461-75886480 | MS.gene74119:CDS | 35.0% | |
| TAAAGTGAGGCAGTTATTAC+AGG | + | chr7.4:75887196-75887215 | MS.gene74119:CDS | 35.0% | |
| TATATTAAACGTCTCTGCAG+TGG | + | chr7.4:75887613-75887632 | MS.gene74119:CDS | 35.0% | |
| TGAATTACCAAAGACAGTGT+TGG | - | chr7.4:75886085-75886104 | None:intergenic | 35.0% | |
| TGTAATAACTGCCTCACTTT+AGG | - | chr7.4:75887197-75887216 | None:intergenic | 35.0% | |
| ! | AAGAACCAAGTTGACATTAG+TGG | + | chr7.4:75886906-75886925 | MS.gene74119:CDS | 35.0% |
| ! | AGAGGACTTTGATAACAGAA+TGG | + | chr7.4:75886854-75886873 | MS.gene74119:CDS | 35.0% |
| ! | ATTTTCATCTTTGATCTCGG+TGG | + | chr7.4:75886747-75886766 | MS.gene74119:CDS | 35.0% |
| ! | GGATAATGTCTTTCAAGTCA+AGG | + | chr7.4:75886803-75886822 | MS.gene74119:CDS | 35.0% |
| ! | GTTAGAGGAAGCTTGATTTT+TGG | - | chr7.4:75886058-75886077 | None:intergenic | 35.0% |
| ! | TCTCCATACACTTTTCAAAG+AGG | - | chr7.4:75887091-75887110 | None:intergenic | 35.0% |
| !! | AATGGTACAGAAGTATTCCT+AGG | - | chr7.4:75887407-75887426 | None:intergenic | 35.0% |
| !! | CTTTTTGAAGGAGCTTAAGA+TGG | + | chr7.4:75887943-75887962 | MS.gene74119:CDS | 35.0% |
| !!! | AGAGATTGCAGAAGCATTTT+TGG | + | chr7.4:75886542-75886561 | MS.gene74119:CDS | 35.0% |
| AAAAGCAACACAAGAAGGAG+TGG | - | chr7.4:75886004-75886023 | None:intergenic | 40.0% | |
| AAAGATGCAGGTGAAATTGC+TGG | + | chr7.4:75886633-75886652 | MS.gene74119:CDS | 40.0% | |
| AAATACGATGGAGTTGCGAT+CGG | + | chr7.4:75885886-75885905 | MS.gene74119:CDS | 40.0% | |
| AACACCAGCAATGACCTTAA+AGG | - | chr7.4:75886430-75886449 | None:intergenic | 40.0% | |
| AATTTCACCTGCATCTTTGG+TGG | - | chr7.4:75886631-75886650 | None:intergenic | 40.0% | |
| ACACCAGCAATGACCTTAAA+GGG | - | chr7.4:75886429-75886448 | None:intergenic | 40.0% | |
| AGAGATTGAGAGAATGATCC+AGG | + | chr7.4:75887700-75887719 | MS.gene74119:CDS | 40.0% | |
| AGCAATTTCACCTGCATCTT+TGG | - | chr7.4:75886634-75886653 | None:intergenic | 40.0% | |
| ATGTTCCAAACTTGGTACTG+CGG | + | chr7.4:75887321-75887340 | MS.gene74119:CDS | 40.0% | |
| CCAGTAAAAGCAACACAAGA+AGG | - | chr7.4:75886009-75886028 | None:intergenic | 40.0% | |
| CGATGATCGTTGTGAAATAC+AGG | + | chr7.4:75886460-75886479 | MS.gene74119:CDS | 40.0% | |
| CTTCTGTTCATCAATCACAC+GGG | + | chr7.4:75887040-75887059 | MS.gene74119:CDS | 40.0% | |
| GAATGAACAGAACGATAGAG+TGG | + | chr7.4:75885948-75885967 | MS.gene74119:CDS | 40.0% | |
| GACATAGATGCTCTATGTCA+AGG | + | chr7.4:75887011-75887030 | MS.gene74119:CDS | 40.0% | |
| GTAATCACTGCATTCTCAAC+AGG | - | chr7.4:75886573-75886592 | None:intergenic | 40.0% | |
| GTAGATGATGTAGTCCTTGT+TGG | + | chr7.4:75887155-75887174 | MS.gene74119:CDS | 40.0% | |
| GTTGCGAAATTCTTGCGAAA+GGG | + | chr7.4:75886950-75886969 | MS.gene74119:CDS | 40.0% | |
| GTTTCATTCTCTTGGCACAA+TGG | + | chr7.4:75885858-75885877 | MS.gene74119:CDS | 40.0% | |
| TATACTGTTGTGGCCCTTTA+AGG | + | chr7.4:75886413-75886432 | MS.gene74119:CDS | 40.0% | |
| TCTTGCATAATTCCTTCCCT+TGG | - | chr7.4:75887229-75887248 | None:intergenic | 40.0% | |
| TTATGAGTGTGGTGATTCCT+AGG | + | chr7.4:75887387-75887406 | MS.gene74119:CDS | 40.0% | |
| TTCATTACCTTCAACCTGAG+GGG | - | chr7.4:75887453-75887472 | None:intergenic | 40.0% | |
| TTGTCTTGCAGATGCTAAGA+TGG | + | chr7.4:75887121-75887140 | MS.gene74119:CDS | 40.0% | |
| ! | GGACCTCTTTGAAAAGTGTA+TGG | + | chr7.4:75887085-75887104 | MS.gene74119:CDS | 40.0% |
| ! | GGACTTTGATAACAGAATGG+TGG | + | chr7.4:75886857-75886876 | MS.gene74119:CDS | 40.0% |
| ! | GTATCGATACCAAGTGACAA+AGG | - | chr7.4:75887356-75887375 | None:intergenic | 40.0% |
| ! | TTTTACTGGATCCCAAAGGT+TGG | + | chr7.4:75886020-75886039 | MS.gene74119:CDS | 40.0% |
| !! | CTTCTAGGATTCCTAAAGTG+AGG | + | chr7.4:75887183-75887202 | MS.gene74119:CDS | 40.0% |
| !! | TACCAAAGACAGTGTTGGTT+GGG | - | chr7.4:75886080-75886099 | None:intergenic | 40.0% |
| !! | TATTATACCCCTCAGGTTGA+AGG | + | chr7.4:75887443-75887462 | MS.gene74119:CDS | 40.0% |
| !! | TCACTTGGTATCGATACAGA+AGG | + | chr7.4:75887359-75887378 | MS.gene74119:CDS | 40.0% |
| !! | TTACCAAAGACAGTGTTGGT+TGG | - | chr7.4:75886081-75886100 | None:intergenic | 40.0% |
| !! | TTGCTTTTACTGGATCCCAA+AGG | + | chr7.4:75886016-75886035 | MS.gene74119:CDS | 40.0% |
| !!! | CCTTCTTGTGTTGCTTTTAC+TGG | + | chr7.4:75886006-75886025 | MS.gene74119:CDS | 40.0% |
| AAACAGACGTATCTTCCTGC+TGG | - | chr7.4:75887916-75887935 | None:intergenic | 45.0% | |
| AACCCAACCAACACTGTCTT+TGG | + | chr7.4:75886075-75886094 | MS.gene74119:CDS | 45.0% | |
| ACATTCCGCAGTACCAAGTT+TGG | - | chr7.4:75887329-75887348 | None:intergenic | 45.0% | |
| AGAATTTCGCAACCTCCTCA+AGG | - | chr7.4:75886943-75886962 | None:intergenic | 45.0% | |
| AGCATCACCAACCAACCTTT+GGG | - | chr7.4:75886034-75886053 | None:intergenic | 45.0% | |
| CATAAGCAACAGCCTCATCA+GGG | - | chr7.4:75887259-75887278 | None:intergenic | 45.0% | |
| CCAGGAAGCTGACAATTTCA+AGG | + | chr7.4:75887718-75887737 | MS.gene74119:CDS | 45.0% | |
| CCTTGAAATTGTCAGCTTCC+TGG | - | chr7.4:75887721-75887740 | None:intergenic | 45.0% | |
| CTTACTCTTGCGTTGGAGTA+TGG | + | chr7.4:75885926-75885945 | MS.gene74119:CDS | 45.0% | |
| CTTCACTAAGCAAAACAGCC+TGG | - | chr7.4:75887292-75887311 | None:intergenic | 45.0% | |
| GATGATGTAGTCCTTGTTGG+TGG | + | chr7.4:75887158-75887177 | MS.gene74119:CDS | 45.0% | |
| GGTTGCGAAATTCTTGCGAA+AGG | + | chr7.4:75886949-75886968 | MS.gene74119:CDS | 45.0% | |
| TCCTAGAAGAACCACCAACA+AGG | - | chr7.4:75887172-75887191 | None:intergenic | 45.0% | |
| TTCATCTTTGATCTCGGTGG+TGG | + | chr7.4:75886750-75886769 | MS.gene74119:CDS | 45.0% | |
| ! | ACAGGAGTTTTTCCAAGGGA+AGG | + | chr7.4:75887214-75887233 | MS.gene74119:CDS | 45.0% |
| ! | GCAAGTGAGAACAACTTGCT+TGG | + | chr7.4:75887515-75887534 | MS.gene74119:CDS | 45.0% |
| ! | TTTCAAGTCAAGGCCACTTC+TGG | + | chr7.4:75886813-75886832 | MS.gene74119:CDS | 45.0% |
| ! | TTTGATTGATGGCAACCAGC+AGG | + | chr7.4:75887898-75887917 | MS.gene74119:CDS | 45.0% |
| !! | CAAGAGCATTAACCCTGATG+AGG | + | chr7.4:75887244-75887263 | MS.gene74119:CDS | 45.0% |
| !! | TCCTTGTTGGTGGTTCTTCT+AGG | + | chr7.4:75887168-75887187 | MS.gene74119:CDS | 45.0% |
| !! | AAAATGAAATTAAATTTAAA+AGG | - | chr7.4:75886195-75886214 | None:intergenic | 5.0% |
| !! | AAATGAAATTAAATTTAAAA+GGG | - | chr7.4:75886194-75886213 | None:intergenic | 5.0% |
| ACTGCAGCTGCTCTTGCATA+TGG | + | chr7.4:75886687-75886706 | MS.gene74119:CDS | 50.0% | |
| AGAAGAGCCACCAAAGATGC+AGG | + | chr7.4:75886621-75886640 | MS.gene74119:CDS | 50.0% | |
| ATACTGTGAGAGGAAGCCCA+CGG | - | chr7.4:75887571-75887590 | None:intergenic | 50.0% | |
| CAGCATCACCAACCAACCTT+TGG | - | chr7.4:75886035-75886054 | None:intergenic | 50.0% | |
| CCATAAGCAACAGCCTCATC+AGG | - | chr7.4:75887260-75887279 | None:intergenic | 50.0% | |
| CGCAAGAGTAAGTCGTTCCA+AGG | - | chr7.4:75885918-75885937 | None:intergenic | 50.0% | |
| CGTTGTGAAATACAGGGGCA+AGG | + | chr7.4:75886467-75886486 | MS.gene74119:CDS | 50.0% | |
| GGAACGACTTACTCTTGCGT+TGG | + | chr7.4:75885919-75885938 | MS.gene74119:CDS | 50.0% | |
| GGACGCCACTAATGTCAACT+TGG | - | chr7.4:75886914-75886933 | None:intergenic | 50.0% | |
| GTTGCGATCGGAATTGACCT+TGG | + | chr7.4:75885898-75885917 | MS.gene74119:CDS | 50.0% | |
| TATCAAAGTCCTCTCCTCCG+AGG | - | chr7.4:75886848-75886867 | None:intergenic | 50.0% | |
| TATGCAAGAGCAGCTGCAGT+TGG | - | chr7.4:75886687-75886706 | None:intergenic | 50.0% | |
| TCTGCAGTGGAAGAAACCAG+TGG | + | chr7.4:75887626-75887645 | MS.gene74119:CDS | 50.0% | |
| ! | ACTGGATCCCAAAGGTTGGT+TGG | + | chr7.4:75886024-75886043 | MS.gene74119:CDS | 50.0% |
| ! | ACTTCTGGAGACACACACCT+CGG | + | chr7.4:75886828-75886847 | MS.gene74119:CDS | 50.0% |
| ! | CCTGATGAGGCTGTTGCTTA+TGG | + | chr7.4:75887257-75887276 | MS.gene74119:CDS | 50.0% |
| ! | GCAACCTCCTCAAGGCTTTT+GGG | - | chr7.4:75886935-75886954 | None:intergenic | 50.0% |
| !! | GACAGTGTTGGTTGGGTTAG+AGG | - | chr7.4:75886073-75886092 | None:intergenic | 50.0% |
| !! | TGGCCCTTTAAGGTCATTGC+TGG | + | chr7.4:75886423-75886442 | MS.gene74119:CDS | 50.0% |
| AAAGTTCCTCTTGCTCCCCG+TGG | + | chr7.4:75887551-75887570 | MS.gene74119:CDS | 55.0% | |
| AAGTTCCTCTTGCTCCCCGT+GGG | + | chr7.4:75887552-75887571 | MS.gene74119:CDS | 55.0% | |
| GAGGTGTGTGTCTCCAGAAG+TGG | - | chr7.4:75886829-75886848 | None:intergenic | 55.0% | |
| TACTGTGAGAGGAAGCCCAC+GGG | - | chr7.4:75887570-75887589 | None:intergenic | 55.0% | |
| TGCTTATGGTGCAGCTGTCC+AGG | + | chr7.4:75887271-75887290 | MS.gene74119:CDS | 55.0% | |
| ! | CGCAACCTCCTCAAGGCTTT+TGG | - | chr7.4:75886936-75886955 | None:intergenic | 55.0% |
| ACTGTGAGAGGAAGCCCACG+GGG | - | chr7.4:75887569-75887588 | None:intergenic | 60.0% | |
| AGACACACACCTCGGAGGAG+AGG | + | chr7.4:75886836-75886855 | MS.gene74119:CDS | 60.0% | |
| GCGTCCCAAAAGCCTTGAGG+AGG | + | chr7.4:75886928-75886947 | MS.gene74119:CDS | 60.0% | |
| GTGGCGTCCCAAAAGCCTTG+AGG | + | chr7.4:75886925-75886944 | MS.gene74119:CDS | 60.0% | |
| TCTGGAGACACACACCTCGG+AGG | + | chr7.4:75886831-75886850 | MS.gene74119:CDS | 60.0% | |
| GGAAGCCCACGGGGAGCAAG+AGG | - | chr7.4:75887560-75887579 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 75885847 | 75888033 | 75885847 | ID=MS.gene74119 |
| chr7.4 | mRNA | 75885847 | 75888033 | 75885847 | ID=MS.gene74119.t1;Parent=MS.gene74119 |
| chr7.4 | exon | 75885847 | 75886096 | 75885847 | ID=MS.gene74119.t1.exon1;Parent=MS.gene74119.t1 |
| chr7.4 | CDS | 75885847 | 75886096 | 75885847 | ID=cds.MS.gene74119.t1;Parent=MS.gene74119.t1 |
| chr7.4 | exon | 75886361 | 75888033 | 75886361 | ID=MS.gene74119.t1.exon2;Parent=MS.gene74119.t1 |
| chr7.4 | CDS | 75886361 | 75888033 | 75886361 | ID=cds.MS.gene74119.t1;Parent=MS.gene74119.t1 |
| Gene Sequence |
| Protein sequence |
