Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74768.t1 | XP_004489170.1 | 95 | 180 | 9 | 0 | 1 | 180 | 1 | 180 | 5.20E-89 | 337 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74768.t1 | Q8H1F4 | 77.0 | 174 | 40 | 0 | 6 | 179 | 7 | 180 | 9.4e-71 | 267.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74768.t1 | A0A1S2XGU1 | 95.0 | 180 | 9 | 0 | 1 | 180 | 1 | 180 | 3.8e-89 | 337.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74768 | MS.gene50077 | PPI |
| MS.gene07800 | MS.gene74768 | PPI |
| MS.gene74768 | MS.gene68223 | PPI |
| MS.gene74768 | MS.gene064893 | PPI |
| MS.gene74768 | MS.gene003223 | PPI |
| MS.gene30333 | MS.gene74768 | PPI |
| MS.gene74768 | MS.gene056700 | PPI |
| MS.gene74768 | MS.gene45686 | PPI |
| MS.gene003764 | MS.gene74768 | PPI |
| MS.gene74768 | MS.gene02789 | PPI |
| MS.gene74768 | MS.gene02023 | PPI |
| MS.gene74768 | MS.gene021666 | PPI |
| MS.gene74768 | MS.gene74608 | PPI |
| MS.gene74768 | MS.gene011220 | PPI |
| MS.gene74768 | MS.gene30333 | PPI |
| MS.gene74768 | MS.gene043279 | PPI |
| MS.gene74768 | MS.gene79635 | PPI |
| MS.gene74768 | MS.gene37394 | PPI |
| MS.gene014282 | MS.gene74768 | PPI |
| MS.gene74768 | MS.gene063166 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74768.t1 | MTR_8g017630 | 86.034 | 179 | 25 | 0 | 1 | 179 | 1 | 179 | 2.01e-114 | 322 |
| MS.gene74768.t1 | MTR_0350s0010 | 83.721 | 172 | 27 | 1 | 9 | 179 | 48 | 219 | 1.52e-104 | 299 |
| MS.gene74768.t1 | MTR_2g028750 | 73.410 | 173 | 46 | 0 | 8 | 180 | 33 | 205 | 7.22e-93 | 269 |
| MS.gene74768.t1 | MTR_7g009640 | 94.074 | 135 | 8 | 0 | 9 | 143 | 1 | 135 | 2.58e-88 | 255 |
| MS.gene74768.t1 | MTR_8g018030 | 83.051 | 59 | 10 | 0 | 7 | 65 | 8 | 66 | 5.52e-31 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74768.t1 | AT4G08520 | 77.011 | 174 | 40 | 0 | 6 | 179 | 7 | 180 | 1.63e-99 | 285 |
| MS.gene74768.t1 | AT3G09800 | 74.713 | 174 | 44 | 0 | 6 | 179 | 5 | 178 | 2.60e-96 | 277 |
| MS.gene74768.t1 | AT3G09800 | 74.713 | 174 | 44 | 0 | 6 | 179 | 5 | 178 | 2.60e-96 | 277 |
| MS.gene74768.t1 | AT3G09800 | 74.713 | 174 | 44 | 0 | 6 | 179 | 5 | 178 | 2.60e-96 | 277 |
| MS.gene74768.t1 | AT3G09800 | 74.713 | 174 | 44 | 0 | 6 | 179 | 85 | 258 | 9.77e-95 | 276 |
| MS.gene74768.t1 | AT1G60970 | 71.098 | 173 | 50 | 0 | 8 | 180 | 5 | 177 | 8.24e-91 | 263 |
| MS.gene74768.t1 | AT3G09800 | 72.131 | 122 | 34 | 0 | 58 | 179 | 18 | 139 | 6.01e-59 | 181 |
| MS.gene74768.t1 | AT3G09800 | 72.131 | 122 | 34 | 0 | 58 | 179 | 18 | 139 | 6.01e-59 | 181 |
Find 22 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGAGGAGTCAGCATCTA+TGG | 0.334196 | 7.1:+85928922 | None:intergenic |
| TGCCTTGACGAGATAGTTGA+TGG | 0.404780 | 7.1:-85929081 | MS.gene74768:CDS |
| AAGAGAGGCACTTGAGAACT+TGG | 0.422153 | 7.1:-85929118 | MS.gene74768:CDS |
| AGCATTTGTCTTAATAGTCT+TGG | 0.457903 | 7.1:+85930626 | None:intergenic |
| TGCAGACGCTAACGCAAGCA+TGG | 0.507776 | 7.1:-85928336 | MS.gene74768:intron |
| GACCTGCATTTCTTTGTCAC+TGG | 0.516261 | 7.1:-85929329 | MS.gene74768:CDS |
| TGACTCCTCCTTGTCTGAGC+AGG | 0.518645 | 7.1:-85928912 | MS.gene74768:intron |
| ATGCAATCACCCTTCTGTTG+AGG | 0.540407 | 7.1:-85929253 | MS.gene74768:intron |
| TGCCAGTGACAAAGAAATGC+AGG | 0.541473 | 7.1:+85929327 | None:intergenic |
| AAGACAAATGCTCGCACAGA+AGG | 0.544890 | 7.1:-85930615 | MS.gene74768:intron |
| AGCCAAAATACCTCAACAGA+AGG | 0.555442 | 7.1:+85929243 | None:intergenic |
| TTCCCTCTGAGTCTAAAAGA+AGG | 0.560577 | 7.1:+85930727 | None:intergenic |
| GCAGACGCTAACGCAAGCAT+GGG | 0.582122 | 7.1:-85928335 | MS.gene74768:intron |
| GCCAAAATACCTCAACAGAA+GGG | 0.598170 | 7.1:+85929244 | None:intergenic |
| CTCCATCAACTATCTCGTCA+AGG | 0.603291 | 7.1:+85929079 | None:intergenic |
| GTCAGCATCTATGGTGTGAG+AGG | 0.608148 | 7.1:+85928931 | None:intergenic |
| TAGCACTACCTGCTCAGACA+AGG | 0.632222 | 7.1:+85928904 | None:intergenic |
| TTGACGAGATAGTTGATGGA+GGG | 0.641968 | 7.1:-85929077 | MS.gene74768:intron |
| CTTGACGAGATAGTTGATGG+AGG | 0.654429 | 7.1:-85929078 | MS.gene74768:CDS |
| GAATAATGTTGACAAAAGAG+AGG | 0.658404 | 7.1:-85929133 | MS.gene74768:CDS |
| CACTACCTGCTCAGACAAGG+AGG | 0.675813 | 7.1:+85928907 | None:intergenic |
| AGGATGATACTCGAAACAAG+TGG | 0.724853 | 7.1:-85928977 | MS.gene74768:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACTTGATAAATATAA+TGG | - | chr7.1:85929929-85929948 | MS.gene74768:intron | 10.0% |
| !! | ACTAAGATAATAAATATTTA+TGG | + | chr7.1:85931590-85931609 | None:intergenic | 10.0% |
| !! | CAAAAATTACTTTATAAAAT+AGG | + | chr7.1:85930852-85930871 | None:intergenic | 10.0% |
| !!! | AATATTTTTTAAAAAACGAA+TGG | + | chr7.1:85931009-85931028 | None:intergenic | 10.0% |
| !!! | GTTTTTAATTATCATTATTT+TGG | + | chr7.1:85929984-85930003 | None:intergenic | 10.0% |
| !! | AGTATATCATAAAACTTTAT+TGG | - | chr7.1:85928643-85928662 | MS.gene74768:intron | 15.0% |
| !! | ATATTCCAAACTAAAAAATT+TGG | + | chr7.1:85930496-85930515 | None:intergenic | 15.0% |
| !!! | GTAATTTTTGTATCATTTAT+AGG | - | chr7.1:85930862-85930881 | MS.gene74768:intron | 15.0% |
| !! | AAAAGATTCCTAATACTTAT+AGG | + | chr7.1:85928422-85928441 | None:intergenic | 20.0% |
| !! | AATATGATATCAAAGTCTAT+AGG | - | chr7.1:85929723-85929742 | MS.gene74768:intron | 20.0% |
| !! | AGCTATTAATATTTGTGTTA+AGG | - | chr7.1:85929199-85929218 | MS.gene74768:intron | 20.0% |
| !! | ATAGACTTTGATATCATATT+AGG | + | chr7.1:85929723-85929742 | None:intergenic | 20.0% |
| !! | ATAGGAATGATGAATAAAAT+AGG | + | chr7.1:85930834-85930853 | None:intergenic | 20.0% |
| !! | ATATCTGTTAAAATCTGTAA+TGG | + | chr7.1:85929431-85929450 | None:intergenic | 20.0% |
| !! | TAAACAAAACAAAAAAGCAA+TGG | + | chr7.1:85929141-85929160 | None:intergenic | 20.0% |
| !! | TAATTTCATAAACTCGTATT+GGG | + | chr7.1:85930469-85930488 | None:intergenic | 20.0% |
| !! | TGTACTAGTAGTTATTAAAT+AGG | - | chr7.1:85930357-85930376 | MS.gene74768:intron | 20.0% |
| !! | TTAATGTCTATATGATACAA+TGG | + | chr7.1:85930566-85930585 | None:intergenic | 20.0% |
| !! | TTAATTTCATAAACTCGTAT+TGG | + | chr7.1:85930470-85930489 | None:intergenic | 20.0% |
| !!! | AGAAGGATATTTTTTATCAT+AGG | + | chr7.1:85929276-85929295 | None:intergenic | 20.0% |
| !!! | TATTTGTGTTAAGGTATTAT+TGG | - | chr7.1:85929208-85929227 | MS.gene74768:intron | 20.0% |
| !!! | TTATTCTCTTTTACATTAGT+TGG | - | chr7.1:85928464-85928483 | MS.gene74768:intron | 20.0% |
| ! | AAAACAAATCTATCAACCTT+AGG | - | chr7.1:85930250-85930269 | MS.gene74768:intron | 25.0% |
| ! | AACTGTCAGATTATAATTTG+AGG | - | chr7.1:85930419-85930438 | MS.gene74768:intron | 25.0% |
| ! | AATATCAAAATTTCACTGTC+AGG | + | chr7.1:85931662-85931681 | None:intergenic | 25.0% |
| ! | ATTAGTTAATGTGTACCAAT+GGG | + | chr7.1:85930148-85930167 | None:intergenic | 25.0% |
| ! | CATGATTATTGATGTTTACT+GGG | - | chr7.1:85929493-85929512 | MS.gene74768:intron | 25.0% |
| ! | GATCACAAAAAATAAAACCT+TGG | - | chr7.1:85930053-85930072 | MS.gene74768:intron | 25.0% |
| ! | GTGTCAAAACTTATATTGAA+GGG | - | chr7.1:85931245-85931264 | MS.gene74768:intron | 25.0% |
| ! | TATAAGGAAAGTTATGAATC+TGG | + | chr7.1:85931518-85931537 | None:intergenic | 25.0% |
| ! | TATCTTGAATCAATATGTCA+TGG | - | chr7.1:85930806-85930825 | MS.gene74768:intron | 25.0% |
| ! | TATTAGTTAATGTGTACCAA+TGG | + | chr7.1:85930149-85930168 | None:intergenic | 25.0% |
| ! | TCAACCAAAATATACATACT+TGG | + | chr7.1:85930124-85930143 | None:intergenic | 25.0% |
| ! | TCACAATTTATATTTCTCGA+AGG | - | chr7.1:85928673-85928692 | MS.gene74768:intron | 25.0% |
| ! | TGTCAAAACTTATATTGAAG+GGG | - | chr7.1:85931246-85931265 | MS.gene74768:intron | 25.0% |
| ! | TGTGTCAAAACTTATATTGA+AGG | - | chr7.1:85931244-85931263 | MS.gene74768:intron | 25.0% |
| ! | TTATTATGACATTCACTATG+TGG | - | chr7.1:85930524-85930543 | MS.gene74768:intron | 25.0% |
| ! | TTATTTACATTGATCCATCA+AGG | - | chr7.1:85928384-85928403 | MS.gene74768:intron | 25.0% |
| ! | TTCTTGAAGGTTTAAATATG+AGG | - | chr7.1:85929078-85929097 | MS.gene74768:CDS | 25.0% |
| ! | TTGATTTAGAGAAACACTAA+TGG | - | chr7.1:85928753-85928772 | MS.gene74768:intron | 25.0% |
| !! | ATAAGTAATTGGAGAGTTTT+TGG | - | chr7.1:85929565-85929584 | MS.gene74768:intron | 25.0% |
| !! | TCAAGTTATGTGCATTTTTA+TGG | - | chr7.1:85928334-85928353 | MS.gene74768:CDS | 25.0% |
| !! | TCACTGTGTAATATATTTTC+AGG | + | chr7.1:85929851-85929870 | None:intergenic | 25.0% |
| !! | TCTTTCAAAACCGATTTATA+TGG | + | chr7.1:85929677-85929696 | None:intergenic | 25.0% |
| !!! | AACTGCCAAATTTTTTAGTT+TGG | - | chr7.1:85930488-85930507 | MS.gene74768:intron | 25.0% |
| !!! | ATGTTTTTTTAGTTTCACGA+TGG | + | chr7.1:85929107-85929126 | None:intergenic | 25.0% |
| !!! | TCTTCATACTTGTTTTACTT+TGG | - | chr7.1:85931560-85931579 | MS.gene74768:intron | 25.0% |
| !!! | TTGAATGTGTTCATTTTTCA+TGG | - | chr7.1:85930079-85930098 | MS.gene74768:intron | 25.0% |
| AAAAATATTCCCTCACTTGA+AGG | - | chr7.1:85931020-85931039 | MS.gene74768:intron | 30.0% | |
| AAAAATCGATCGAGAACTAA+AGG | + | chr7.1:85928956-85928975 | None:intergenic | 30.0% | |
| AGCATTTGTCTTAATAGTCT+TGG | + | chr7.1:85929394-85929413 | None:intergenic | 30.0% | |
| ATATGTGGTTACATTCATGT+CGG | - | chr7.1:85931326-85931345 | MS.gene74768:intron | 30.0% | |
| CATTGAAAATAGACAAGGTA+CGG | - | chr7.1:85929625-85929644 | MS.gene74768:intron | 30.0% | |
| CCAAAATATACATACTTGGT+AGG | + | chr7.1:85930120-85930139 | None:intergenic | 30.0% | |
| CTAAAAAAAACGTCAGTGTT+GGG | + | chr7.1:85931293-85931312 | None:intergenic | 30.0% | |
| CTAGCAACTTCATGTATATA+AGG | + | chr7.1:85931534-85931553 | None:intergenic | 30.0% | |
| GAATAATGTTGACAAAAGAG+AGG | - | chr7.1:85930884-85930903 | MS.gene74768:intron | 30.0% | |
| GAGTCTGATTAAGTACATTT+AGG | + | chr7.1:85930200-85930219 | None:intergenic | 30.0% | |
| GATGACATTATTGAATTCAG+TGG | - | chr7.1:85928730-85928749 | MS.gene74768:intron | 30.0% | |
| GCATGATTATTGATGTTTAC+TGG | - | chr7.1:85929492-85929511 | MS.gene74768:intron | 30.0% | |
| TAATCATGCAAACTAGCATA+TGG | + | chr7.1:85929481-85929500 | None:intergenic | 30.0% | |
| TAATGCCATACATGATTTCA+TGG | - | chr7.1:85928823-85928842 | MS.gene74768:intron | 30.0% | |
| TAGAGCTCACAATAAGTAAT+TGG | - | chr7.1:85929554-85929573 | MS.gene74768:intron | 30.0% | |
| TATGTAGCTGATATGTTGTT+TGG | - | chr7.1:85930603-85930622 | MS.gene74768:intron | 30.0% | |
| TCCATGTTCCTATAAGTATT+AGG | - | chr7.1:85928411-85928430 | MS.gene74768:intron | 30.0% | |
| TCCTAATACTTATAGGAACA+TGG | + | chr7.1:85928415-85928434 | None:intergenic | 30.0% | |
| TTCACTGACCAAAAAAGAAA+AGG | + | chr7.1:85930301-85930320 | None:intergenic | 30.0% | |
| ! | AAGTTACTTTCTTGCATAGA+TGG | - | chr7.1:85930023-85930042 | MS.gene74768:intron | 30.0% |
| ! | ACCTTGTCTATTTTCAATGT+GGG | + | chr7.1:85929624-85929643 | None:intergenic | 30.0% |
| ! | CCTACCAAGTATGTATATTT+TGG | - | chr7.1:85930117-85930136 | MS.gene74768:intron | 30.0% |
| ! | TACCTTGTCTATTTTCAATG+TGG | + | chr7.1:85929625-85929644 | None:intergenic | 30.0% |
| ! | TCAAAACCGATTTATATGGT+GGG | + | chr7.1:85929673-85929692 | None:intergenic | 30.0% |
| ! | TCTCTTTTACATTAGTTGGA+TGG | - | chr7.1:85928468-85928487 | MS.gene74768:intron | 30.0% |
| ! | TTACTCCTCCTTTTCTTTTT+TGG | - | chr7.1:85930290-85930309 | MS.gene74768:intron | 30.0% |
| ! | TTCAAAACCGATTTATATGG+TGG | + | chr7.1:85929674-85929693 | None:intergenic | 30.0% |
| ! | TTTCTGGTAAAGTAGCATTT+AGG | + | chr7.1:85929036-85929055 | None:intergenic | 30.0% |
| !! | GATTTGTTTTCATCACATGT+TGG | + | chr7.1:85930240-85930259 | None:intergenic | 30.0% |
| !! | TCAAGTATTTTTCAGATGAC+TGG | - | chr7.1:85929325-85929344 | MS.gene74768:CDS | 30.0% |
| !!! | ACTTTTTTGCTAATCACTGA+TGG | - | chr7.1:85930389-85930408 | MS.gene74768:intron | 30.0% |
| !!! | TATATTTTGGTTGATCCCAT+TGG | - | chr7.1:85930130-85930149 | MS.gene74768:intron | 30.0% |
| !!! | TCATACTTGTTTTACTTTGG+AGG | - | chr7.1:85931563-85931582 | MS.gene74768:intron | 30.0% |
| AAACTCGTATTGGGATAGAA+TGG | + | chr7.1:85930460-85930479 | None:intergenic | 35.0% | |
| AACACTAATGGCTTTCTTGA+AGG | - | chr7.1:85928765-85928784 | MS.gene74768:intron | 35.0% | |
| AAGAATGACTTAGGCTCAAT+AGG | - | chr7.1:85929693-85929712 | MS.gene74768:intron | 35.0% | |
| ACAGATCAACTTTCCGAAAT+TGG | - | chr7.1:85931183-85931202 | MS.gene74768:intron | 35.0% | |
| ACTGACCAAAAAAGAAAAGG+AGG | + | chr7.1:85930298-85930317 | None:intergenic | 35.0% | |
| AGTTTCGTGCATGGATAATA+TGG | + | chr7.1:85929762-85929781 | None:intergenic | 35.0% | |
| ATTCAGTGGGTAATTTCAAG+TGG | + | chr7.1:85928988-85929007 | None:intergenic | 35.0% | |
| CCTAAAAAAAACGTCAGTGT+TGG | + | chr7.1:85931294-85931313 | None:intergenic | 35.0% | |
| CTAAAGTATGGTGCTTCATA+GGG | + | chr7.1:85931423-85931442 | None:intergenic | 35.0% | |
| CTTACAAAATCGACCTGTTA+AGG | + | chr7.1:85929883-85929902 | None:intergenic | 35.0% | |
| GAATACCTACAGCTAAAGTA+TGG | + | chr7.1:85931435-85931454 | None:intergenic | 35.0% | |
| GACATGAATGTAACCACATA+TGG | + | chr7.1:85931327-85931346 | None:intergenic | 35.0% | |
| GATGGATCATCAATGTTGTA+TGG | - | chr7.1:85928486-85928505 | MS.gene74768:intron | 35.0% | |
| TAAAGGAGAGAATATGACGA+GGG | + | chr7.1:85928939-85928958 | None:intergenic | 35.0% | |
| TACTTTCTTGCATAGATGGA+AGG | - | chr7.1:85930027-85930046 | MS.gene74768:intron | 35.0% | |
| TCCCACATTGAAAATAGACA+AGG | - | chr7.1:85929620-85929639 | MS.gene74768:intron | 35.0% | |
| TCTGATATTATGTTACCACC+AGG | + | chr7.1:85928610-85928629 | None:intergenic | 35.0% | |
| TGGTAAAGTAGCATTTAGGT+TGG | + | chr7.1:85929032-85929051 | None:intergenic | 35.0% | |
| TGTAATACTGATCAAGCCTA+AGG | + | chr7.1:85930269-85930288 | None:intergenic | 35.0% | |
| TTTGCATGTTTAGAAAGAGC+TGG | - | chr7.1:85929166-85929185 | MS.gene74768:intron | 35.0% | |
| ! | ATCCTTCTTTTAGACTCAGA+GGG | - | chr7.1:85929288-85929307 | MS.gene74768:CDS | 35.0% |
| ! | GTTTTCATCACATGTTGGAT+TGG | + | chr7.1:85930235-85930254 | None:intergenic | 35.0% |
| ! | TATCCTTCTTTTAGACTCAG+AGG | - | chr7.1:85929287-85929306 | MS.gene74768:CDS | 35.0% |
| ! | TTCAGTGGGTAATTTCAAGT+GGG | + | chr7.1:85928987-85929006 | None:intergenic | 35.0% |
| !! | CTTAACAGGTCGATTTTGTA+AGG | - | chr7.1:85929881-85929900 | MS.gene74768:intron | 35.0% |
| !!! | CCAACACTGACGTTTTTTTT+AGG | - | chr7.1:85931291-85931310 | MS.gene74768:intron | 35.0% |
| !!! | CGGTTTTGAAAGAATGACTT+AGG | - | chr7.1:85929684-85929703 | MS.gene74768:intron | 35.0% |
| !!! | GCTAGTTTTGAACTGTTTGT+TGG | + | chr7.1:85929351-85929370 | None:intergenic | 35.0% |
| !!! | GTTTTAGCTTCAGTTCTTCA+GGG | - | chr7.1:85930733-85930752 | MS.gene74768:CDS | 35.0% |
| !!! | TGTTTTAGCTTCAGTTCTTC+AGG | - | chr7.1:85930732-85930751 | MS.gene74768:CDS | 35.0% |
| AAGCACCATACTTTAGCTGT+AGG | - | chr7.1:85931427-85931446 | MS.gene74768:intron | 40.0% | |
| ACACTATTGAGTTTCGTGCA+TGG | + | chr7.1:85929771-85929790 | None:intergenic | 40.0% | |
| ACATTCACTATGTGGAACTG+TGG | - | chr7.1:85930532-85930551 | MS.gene74768:intron | 40.0% | |
| AGCCAAAATACCTCAACAGA+AGG | + | chr7.1:85930777-85930796 | None:intergenic | 40.0% | |
| AGGATGATACTCGAAACAAG+TGG | - | chr7.1:85931040-85931059 | MS.gene74768:intron | 40.0% | |
| ATGTGACACACCTTTCTTGT+AGG | - | chr7.1:85929242-85929261 | MS.gene74768:intron | 40.0% | |
| CAACGCCATGAAATCATGTA+TGG | + | chr7.1:85928831-85928850 | None:intergenic | 40.0% | |
| CAGTGAACACACATCAGTAT+TGG | - | chr7.1:85930314-85930333 | MS.gene74768:intron | 40.0% | |
| CCTAAAGTATGGTGCTTCAT+AGG | + | chr7.1:85931485-85931504 | None:intergenic | 40.0% | |
| CTAAAGGAGAGAATATGACG+AGG | + | chr7.1:85928940-85928959 | None:intergenic | 40.0% | |
| CTCGAAGGTTTGCGATAAAA+TGG | - | chr7.1:85928688-85928707 | MS.gene74768:intron | 40.0% | |
| GAGTATCATCCTTCAAGTGA+GGG | + | chr7.1:85931032-85931051 | None:intergenic | 40.0% | |
| GATCCTCTACACCTAAAGTA+TGG | + | chr7.1:85931496-85931515 | None:intergenic | 40.0% | |
| GCACGAAACTCAATAGTGTT+GGG | - | chr7.1:85929772-85929791 | MS.gene74768:intron | 40.0% | |
| GCCAAAATACCTCAACAGAA+GGG | + | chr7.1:85930776-85930795 | None:intergenic | 40.0% | |
| GCTAAAGTATGGTGCTTCAT+AGG | + | chr7.1:85931424-85931443 | None:intergenic | 40.0% | |
| GGACATGAAACCTACAAGAA+AGG | + | chr7.1:85929255-85929274 | None:intergenic | 40.0% | |
| GTGACATCTTTCACCTTAAC+AGG | - | chr7.1:85929867-85929886 | MS.gene74768:intron | 40.0% | |
| TATGTGGAACTGTGGAAGTT+TGG | - | chr7.1:85930540-85930559 | MS.gene74768:intron | 40.0% | |
| TGCACGAAACTCAATAGTGT+TGG | - | chr7.1:85929771-85929790 | MS.gene74768:intron | 40.0% | |
| TTCCCTCTGAGTCTAAAAGA+AGG | + | chr7.1:85929293-85929312 | None:intergenic | 40.0% | |
| TTCCGAAATTGGATCCTCTA+CGG | - | chr7.1:85931194-85931213 | MS.gene74768:intron | 40.0% | |
| TTCGTGCATGGATAATATGG+TGG | + | chr7.1:85929759-85929778 | None:intergenic | 40.0% | |
| ! | AAAAAACGTCAGTGTTGGGT+CGG | + | chr7.1:85931289-85931308 | None:intergenic | 40.0% |
| ! | AAGTATGGTTCTGCAGTTGT+AGG | - | chr7.1:85931220-85931239 | MS.gene74768:intron | 40.0% |
| ! | ATGTCGAAGATGGATTCAGT+GGG | + | chr7.1:85929001-85929020 | None:intergenic | 40.0% |
| ! | CCTATGAAGCACCATACTTT+AGG | - | chr7.1:85931421-85931440 | MS.gene74768:intron | 40.0% |
| ! | GGAACATGGATTAACCTTGA+TGG | + | chr7.1:85928401-85928420 | None:intergenic | 40.0% |
| ! | GGTGTGAGAGGTAACTTTTT+CGG | + | chr7.1:85931077-85931096 | None:intergenic | 40.0% |
| !! | ACCCTTCTGTTGAGGTATTT+TGG | - | chr7.1:85930772-85930791 | MS.gene74768:intron | 40.0% |
| !! | TTGACGAGATAGTTGATGGA+GGG | - | chr7.1:85930940-85930959 | MS.gene74768:intron | 40.0% |
| !!! | GTAACTTTTTCGGCGATAAG+TGG | + | chr7.1:85931067-85931086 | None:intergenic | 40.0% |
| AAGACAAATGCTCGCACAGA+AGG | - | chr7.1:85929402-85929421 | MS.gene74768:intron | 45.0% | |
| ACACGACTAGTGCTTCTTGA+AGG | - | chr7.1:85929065-85929084 | MS.gene74768:intron | 45.0% | |
| AGCACTAGTCGTGTTCTCAA+AGG | + | chr7.1:85929059-85929078 | None:intergenic | 45.0% | |
| AGGCAACAAACTGCCATATG+TGG | - | chr7.1:85931311-85931330 | MS.gene74768:intron | 45.0% | |
| ATATGACGAGGGAGAAAGTG+AGG | + | chr7.1:85928928-85928947 | None:intergenic | 45.0% | |
| ATGAACACATTCAAGCGCCA+AGG | + | chr7.1:85930073-85930092 | None:intergenic | 45.0% | |
| ATGCAATCACCCTTCTGTTG+AGG | - | chr7.1:85930764-85930783 | MS.gene74768:intron | 45.0% | |
| ATTGTATGTGTGTCTCGCGA+GGG | - | chr7.1:85928854-85928873 | MS.gene74768:intron | 45.0% | |
| CGAGTATCATCCTTCAAGTG+AGG | + | chr7.1:85931033-85931052 | None:intergenic | 45.0% | |
| CTCCATCAACTATCTCGTCA+AGG | + | chr7.1:85930941-85930960 | None:intergenic | 45.0% | |
| GACCTGCATTTCTTTGTCAC+TGG | - | chr7.1:85930688-85930707 | MS.gene74768:CDS | 45.0% | |
| GCACCATACTTTAGGTGTAG+AGG | - | chr7.1:85931490-85931509 | MS.gene74768:intron | 45.0% | |
| GCATGTTTAGAAAGAGCTGG+TGG | - | chr7.1:85929169-85929188 | MS.gene74768:intron | 45.0% | |
| GCGACTCCCACCATATAAAT+CGG | - | chr7.1:85929664-85929683 | MS.gene74768:intron | 45.0% | |
| GGTGTGTCACATGATACTTG+TGG | + | chr7.1:85929234-85929253 | None:intergenic | 45.0% | |
| GTCGTGTTCTCAAAGGTTTC+TGG | + | chr7.1:85929052-85929071 | None:intergenic | 45.0% | |
| TAGAAAGAGCTGGTGGAAGA+GGG | - | chr7.1:85929176-85929195 | MS.gene74768:intron | 45.0% | |
| TATGACGAGGGAGAAAGTGA+GGG | + | chr7.1:85928927-85928946 | None:intergenic | 45.0% | |
| TATGGTGCTTCATAGGGTGT+TGG | + | chr7.1:85931478-85931497 | None:intergenic | 45.0% | |
| TGCCAGTGACAAAGAAATGC+AGG | + | chr7.1:85930693-85930712 | None:intergenic | 45.0% | |
| TGCCGTAGAGGATCCAATTT+CGG | + | chr7.1:85931199-85931218 | None:intergenic | 45.0% | |
| TGCCTTGACGAGATAGTTGA+TGG | - | chr7.1:85930936-85930955 | MS.gene74768:intron | 45.0% | |
| TTAGAAAGAGCTGGTGGAAG+AGG | - | chr7.1:85929175-85929194 | MS.gene74768:intron | 45.0% | |
| ! | AGTGGGTAATTTCAAGTGGG+AGG | + | chr7.1:85928984-85929003 | None:intergenic | 45.0% |
| ! | GATGTCGAAGATGGATTCAG+TGG | + | chr7.1:85929002-85929021 | None:intergenic | 45.0% |
| !! | AAGAGAGGCACTTGAGAACT+TGG | - | chr7.1:85930899-85930918 | MS.gene74768:intron | 45.0% |
| !! | ATTCATGTCGGTGTCGTGTA+TGG | - | chr7.1:85931338-85931357 | MS.gene74768:intron | 45.0% |
| !! | CTTGACGAGATAGTTGATGG+AGG | - | chr7.1:85930939-85930958 | MS.gene74768:intron | 45.0% |
| CAAGGAGGAGTCAGCATCTA+TGG | + | chr7.1:85931098-85931117 | None:intergenic | 50.0% | |
| CATTGTATGTGTGTCTCGCG+AGG | - | chr7.1:85928853-85928872 | MS.gene74768:intron | 50.0% | |
| GAACCATACTTCTGCCGTAG+AGG | + | chr7.1:85931211-85931230 | None:intergenic | 50.0% | |
| GATCCTCTACGGCAGAAGTA+TGG | - | chr7.1:85931205-85931224 | MS.gene74768:intron | 50.0% | |
| GGCTGAACTGATGTCGAAGA+TGG | + | chr7.1:85929011-85929030 | None:intergenic | 50.0% | |
| GTCAGCATCTATGGTGTGAG+AGG | + | chr7.1:85931089-85931108 | None:intergenic | 50.0% | |
| TAGCACTACCTGCTCAGACA+AGG | + | chr7.1:85931116-85931135 | None:intergenic | 50.0% | |
| ! | CTCAATAGTGTTGGGCGTGA+TGG | - | chr7.1:85929780-85929799 | MS.gene74768:intron | 50.0% |
| ! | GTTGATGGAGGGTATGCGTT+TGG | - | chr7.1:85930951-85930970 | MS.gene74768:intron | 50.0% |
| ! | TGGGCGTGATGGAGTGTATT+GGG | - | chr7.1:85929791-85929810 | MS.gene74768:intron | 50.0% |
| ! | TTGGGCGTGATGGAGTGTAT+TGG | - | chr7.1:85929790-85929809 | MS.gene74768:intron | 50.0% |
| CACTACCTGCTCAGACAAGG+AGG | + | chr7.1:85931113-85931132 | None:intergenic | 55.0% | |
| GCAGACGCTAACGCAAGCAT+GGG | - | chr7.1:85931682-85931701 | MS.gene74768:intron | 55.0% | |
| TGACTCCTCCTTGTCTGAGC+AGG | - | chr7.1:85931105-85931124 | MS.gene74768:intron | 55.0% | |
| TGCAGACGCTAACGCAAGCA+TGG | - | chr7.1:85931681-85931700 | MS.gene74768:intron | 55.0% | |
| ! | CGTGTGCTGATGTTGCAACC+TGG | - | chr7.1:85928589-85928608 | MS.gene74768:intron | 55.0% |
| ! | GTGCTGATGTTGCAACCTGG+TGG | - | chr7.1:85928592-85928611 | MS.gene74768:intron | 55.0% |
| ! | CGTCAGTGTTGGGTCGGCGT+TGG | + | chr7.1:85931283-85931302 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 85928294 | 85931745 | 85928294 | ID=MS.gene74768 |
| chr7.1 | mRNA | 85928294 | 85931745 | 85928294 | ID=MS.gene74768.t1;Parent=MS.gene74768 |
| chr7.1 | exon | 85931734 | 85931745 | 85931734 | ID=MS.gene74768.t1.exon1;Parent=MS.gene74768.t1 |
| chr7.1 | CDS | 85931734 | 85931745 | 85931734 | ID=cds.MS.gene74768.t1;Parent=MS.gene74768.t1 |
| chr7.1 | exon | 85930616 | 85930775 | 85930616 | ID=MS.gene74768.t1.exon2;Parent=MS.gene74768.t1 |
| chr7.1 | CDS | 85930616 | 85930775 | 85930616 | ID=cds.MS.gene74768.t1;Parent=MS.gene74768.t1 |
| chr7.1 | exon | 85929254 | 85929401 | 85929254 | ID=MS.gene74768.t1.exon3;Parent=MS.gene74768.t1 |
| chr7.1 | CDS | 85929254 | 85929401 | 85929254 | ID=cds.MS.gene74768.t1;Parent=MS.gene74768.t1 |
| chr7.1 | exon | 85929078 | 85929155 | 85929078 | ID=MS.gene74768.t1.exon4;Parent=MS.gene74768.t1 |
| chr7.1 | CDS | 85929078 | 85929155 | 85929078 | ID=cds.MS.gene74768.t1;Parent=MS.gene74768.t1 |
| chr7.1 | exon | 85928913 | 85928997 | 85928913 | ID=MS.gene74768.t1.exon5;Parent=MS.gene74768.t1 |
| chr7.1 | CDS | 85928913 | 85928997 | 85928913 | ID=cds.MS.gene74768.t1;Parent=MS.gene74768.t1 |
| chr7.1 | exon | 85928294 | 85928353 | 85928294 | ID=MS.gene74768.t1.exon6;Parent=MS.gene74768.t1 |
| chr7.1 | CDS | 85928294 | 85928353 | 85928294 | ID=cds.MS.gene74768.t1;Parent=MS.gene74768.t1 |
| Gene Sequence |
| Protein sequence |
