Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75802.t1 | XP_003618123.2 | 94.2 | 345 | 6 | 1 | 1 | 345 | 6 | 336 | 1.60E-190 | 675.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75802.t1 | B5X582 | 51.3 | 304 | 136 | 4 | 48 | 341 | 107 | 408 | 5.4e-83 | 309.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75802.t1 | G7KFG5 | 94.2 | 345 | 6 | 1 | 1 | 345 | 1 | 331 | 1.1e-190 | 675.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene75802 | 0.805173 | 1.52E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene75802 | 0.829847 | 4.09E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene75802 | 0.832116 | 1.14E-55 | -1.69E-46 |
| MS.gene049915 | MS.gene75802 | 0.810305 | 1.23E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene75802 | 0.833186 | 6.16E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene75802 | 0.832842 | 7.51E-56 | -1.69E-46 |
| MS.gene050228 | MS.gene75802 | 0.822123 | 2.80E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene75802 | 0.804977 | 1.67E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene75802 | -0.804201 | 2.42E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene75802 | 0.803409 | 3.53E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene75802 | 0.801006 | 1.10E-48 | -1.69E-46 |
| MS.gene050724 | MS.gene75802 | 0.802097 | 6.60E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene75802 | 0.837334 | 5.53E-57 | -1.69E-46 |
| MS.gene050763 | MS.gene75802 | 0.836873 | 7.25E-57 | -1.69E-46 |
| MS.gene05119 | MS.gene75802 | -0.809361 | 1.97E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene75802 | 0.810237 | 1.27E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene75802 | 0.816622 | 5.03E-52 | -1.69E-46 |
| MS.gene052207 | MS.gene75802 | 0.808403 | 3.15E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene75802 | 0.805721 | 1.16E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene75802 | 0.806233 | 9.09E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene75802 | 0.840663 | 7.59E-58 | -1.69E-46 |
| MS.gene054379 | MS.gene75802 | 0.84109 | 5.87E-58 | -1.69E-46 |
| MS.gene054473 | MS.gene75802 | 0.811764 | 5.95E-51 | -1.69E-46 |
| MS.gene054542 | MS.gene75802 | 0.807749 | 4.34E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene75802 | 0.842222 | 2.95E-58 | -1.69E-46 |
| MS.gene056069 | MS.gene75802 | -0.810587 | 1.07E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene75802 | 0.803971 | 2.70E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene75802 | 0.801133 | 1.04E-48 | -1.69E-46 |
| MS.gene057469 | MS.gene75802 | 0.824839 | 6.49E-54 | -1.69E-46 |
| MS.gene057754 | MS.gene75802 | 0.809221 | 2.11E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene75802 | 0.809037 | 2.31E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene75802 | 0.815645 | 8.31E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene75802 | 0.800632 | 1.32E-48 | -1.69E-46 |
| MS.gene060084 | MS.gene75802 | 0.800869 | 1.18E-48 | -1.69E-46 |
| MS.gene060404 | MS.gene75802 | 0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene75802 | 0.80038 | 1.48E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75802.t1 | MTR_5g099220 | 94.203 | 345 | 6 | 1 | 1 | 345 | 1 | 331 | 0.0 | 664 |
| MS.gene75802.t1 | MTR_5g099220 | 94.081 | 321 | 5 | 1 | 1 | 321 | 6 | 312 | 0.0 | 616 |
| MS.gene75802.t1 | MTR_5g099220 | 85.546 | 339 | 27 | 2 | 1 | 339 | 6 | 322 | 0.0 | 577 |
| MS.gene75802.t1 | MTR_2g031740 | 81.534 | 352 | 45 | 5 | 1 | 345 | 1 | 339 | 0.0 | 562 |
| MS.gene75802.t1 | MTR_5g099220 | 97.683 | 259 | 6 | 0 | 87 | 345 | 1 | 259 | 0.0 | 519 |
| MS.gene75802.t1 | MTR_5g099220 | 97.872 | 235 | 5 | 0 | 87 | 321 | 1 | 235 | 4.93e-169 | 471 |
| MS.gene75802.t1 | MTR_2g031620 | 53.312 | 317 | 132 | 4 | 40 | 341 | 82 | 397 | 1.23e-108 | 332 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75802.t1 | AT1G30680 | 51.316 | 304 | 136 | 4 | 48 | 341 | 107 | 408 | 2.06e-95 | 298 |
| MS.gene75802.t1 | AT1G30660 | 51.485 | 303 | 136 | 4 | 48 | 341 | 26 | 326 | 1.05e-93 | 282 |
| MS.gene75802.t1 | AT1G30660 | 51.485 | 303 | 136 | 4 | 48 | 341 | 33 | 333 | 1.58e-93 | 282 |
| MS.gene75802.t1 | AT1G30660 | 51.485 | 303 | 136 | 4 | 48 | 341 | 23 | 323 | 1.87e-93 | 281 |
Find 82 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGCTTGTTGCTTACTTTA+AGG | 0.093113 | 5.3:+80479576 | MS.gene75802:intron |
| GTTATAGACAAGGTCCTTTA+TGG | 0.130566 | 5.3:+80481061 | MS.gene75802:CDS |
| CGCCCCAAACCCAAAGGTTT+TGG | 0.223708 | 5.3:+80477891 | MS.gene75802:CDS |
| GAACAATGGAGAAAAGATTT+TGG | 0.263962 | 5.3:+80480543 | MS.gene75802:CDS |
| GCACCAAAACCTTTGGGTTT+GGG | 0.271135 | 5.3:-80477894 | None:intergenic |
| AAGCTGAGTTCATCTTTCTT+TGG | 0.292938 | 5.3:-80482521 | None:intergenic |
| GGCACCAAAACCTTTGGGTT+TGG | 0.313375 | 5.3:-80477895 | None:intergenic |
| GTGTAAAGGTGGACAGTTAA+TGG | 0.331736 | 5.3:+80478279 | MS.gene75802:intron |
| ACCTAGTGTGCACAAGTATA+TGG | 0.342634 | 5.3:-80482783 | None:intergenic |
| AAGAGCTAGCACGGCGCCTT+GGG | 0.357506 | 5.3:+80481928 | MS.gene75802:CDS |
| TTGGGGCGAGAAAAGTGATT+TGG | 0.360080 | 5.3:-80477876 | None:intergenic |
| ATGAATGGCACCAAAACCTT+TGG | 0.365791 | 5.3:-80477901 | None:intergenic |
| GAAGAGCTAGCACGGCGCCT+TGG | 0.374758 | 5.3:+80481927 | MS.gene75802:CDS |
| CCTTACAGAATTTCTGCTTA+AGG | 0.380916 | 5.3:-80479620 | None:intergenic |
| AACCCTAAGCTCTCCTCATC+AGG | 0.396006 | 5.3:-80478891 | None:intergenic |
| TACATGTGGTTGGGCTGGTC+AGG | 0.399429 | 5.3:+80478744 | MS.gene75802:CDS |
| GTGGAACAGCAAAGCTTACT+TGG | 0.403923 | 5.3:+80481745 | MS.gene75802:CDS |
| TGAATGGCACCAAAACCTTT+GGG | 0.435245 | 5.3:-80477900 | None:intergenic |
| AAACCTGATGAGGAGAGCTT+AGG | 0.440096 | 5.3:+80478888 | MS.gene75802:CDS |
| ACCTTTCCTGGTGCACCATC+AGG | 0.440161 | 5.3:-80481299 | None:intergenic |
| CACCAAAACCTTTGGGTTTG+GGG | 0.445536 | 5.3:-80477893 | None:intergenic |
| TTAGACAACTCTTGTTTGCC+TGG | 0.447652 | 5.3:+80478137 | MS.gene75802:CDS |
| TTAGGTGGTTCGCATTATCC+TGG | 0.449392 | 5.3:+80481869 | MS.gene75802:intron |
| TTGACCTGGTGGATCATTAT+CGG | 0.454060 | 5.3:-80481895 | None:intergenic |
| AAACAAAATGGGTTGATTGT+TGG | 0.461337 | 5.3:+80480509 | MS.gene75802:CDS |
| GTTGTAGTGAATTTGCAATC+TGG | 0.465654 | 5.3:+80478707 | MS.gene75802:intron |
| AACCTGATGAGGAGAGCTTA+GGG | 0.465798 | 5.3:+80478889 | MS.gene75802:CDS |
| TAATGTCGTCAAGTCCATAA+AGG | 0.465841 | 5.3:-80481075 | None:intergenic |
| TTCTGCAGATGACAAGGAAC+TGG | 0.466614 | 5.3:+80478860 | MS.gene75802:CDS |
| AAGCTTTCACTTGAAGAGGC+TGG | 0.467773 | 5.3:+80481254 | MS.gene75802:CDS |
| TGATAAGCTTTCACTTGAAG+AGG | 0.469616 | 5.3:+80481250 | MS.gene75802:CDS |
| CACGGCGCCTTGGGCGAGAA+AGG | 0.471934 | 5.3:+80481937 | MS.gene75802:CDS |
| GTTGGAATCACTTGGTCCTA+AGG | 0.481400 | 5.3:+80478911 | MS.gene75802:CDS |
| GATAATGATAATAGGTTGAG+GGG | 0.483543 | 5.3:+80481222 | MS.gene75802:intron |
| AGACCTACATGTGGTTGGGC+TGG | 0.487821 | 5.3:+80478739 | MS.gene75802:CDS |
| CAGCAAAGCTTACTTGGATA+AGG | 0.491598 | 5.3:+80481751 | MS.gene75802:CDS |
| AGTAAGCTTTGCTGTTCCAC+AGG | 0.494786 | 5.3:-80481742 | None:intergenic |
| TGGATACCTTTGGACAAAAG+AGG | 0.502264 | 5.3:-80478172 | None:intergenic |
| AGATCTGCCACCAATAGAAA+AGG | 0.504280 | 5.3:+80481331 | MS.gene75802:CDS |
| CCTTTGGACAAAAGAGGTTG+TGG | 0.510616 | 5.3:-80478166 | None:intergenic |
| GGCCTAGGTTCTCAAATACA+TGG | 0.513227 | 5.3:+80482722 | MS.gene75802:intron |
| TGATAATGATAATAGGTTGA+GGG | 0.514143 | 5.3:+80481221 | MS.gene75802:intron |
| ACATGTCAATTTGTCAGAGC+TGG | 0.514292 | 5.3:+80477834 | None:intergenic |
| ACGTACGTACGTACCTTTGG+TGG | 0.517683 | 5.3:-80477933 | None:intergenic |
| CTTCTTCAATGATGCAAATG+AGG | 0.520084 | 5.3:+80482541 | MS.gene75802:CDS |
| AAGGCAACTCTCGGACGAAA+AGG | 0.520966 | 5.3:+80479639 | MS.gene75802:CDS |
| GTGGATCATTATCGGTAGCC+AGG | 0.524131 | 5.3:-80481887 | None:intergenic |
| AGTGTTCCTGATGGTGCACC+AGG | 0.529108 | 5.3:+80481293 | MS.gene75802:CDS |
| AGCTTAGGGTTGGAATCACT+TGG | 0.534820 | 5.3:+80478903 | MS.gene75802:CDS |
| CCTTAAGCAGAAATTCTGTA+AGG | 0.535293 | 5.3:+80479620 | MS.gene75802:CDS |
| TCCTGATGGTGCACCAGGAA+AGG | 0.537409 | 5.3:+80481298 | MS.gene75802:CDS |
| AAGCACAAAGTGGAACCTCT+TGG | 0.547568 | 5.3:+80478107 | MS.gene75802:CDS |
| TAAAATATTGAAGCACAAAG+TGG | 0.551755 | 5.3:+80478097 | MS.gene75802:CDS |
| TACGTACCTTTGGTGGAAAG+TGG | 0.559186 | 5.3:-80477926 | None:intergenic |
| TTGATATGCCAGTGTAAAGG+TGG | 0.562981 | 5.3:+80478268 | MS.gene75802:intron |
| GCCATATACTTGTGCACACT+AGG | 0.563415 | 5.3:+80482782 | MS.gene75802:CDS |
| CTTTAGCTGAAGAGCTAGCA+CGG | 0.564457 | 5.3:+80481919 | MS.gene75802:CDS |
| TAGACAACTCTTGTTTGCCT+GGG | 0.566831 | 5.3:+80478138 | MS.gene75802:CDS |
| TCATTACCACTTTCCACCAA+AGG | 0.570913 | 5.3:+80477920 | MS.gene75802:CDS |
| AAGAGGTTGTGGTAGTTCCC+AGG | 0.571323 | 5.3:-80478155 | None:intergenic |
| TGATGAGGAGAGCTTAGGGT+TGG | 0.573295 | 5.3:+80478893 | MS.gene75802:CDS |
| TGAATGACCTTTCTCGCCCA+AGG | 0.584678 | 5.3:-80481944 | None:intergenic |
| TCAGGTGTTGGCAAGTACGC+TGG | 0.585250 | 5.3:+80482498 | MS.gene75802:intron |
| TCAGCTAAAGCTTGACCTGG+TGG | 0.586602 | 5.3:-80481906 | None:intergenic |
| GAGAAAAGTGATTTGGTGAG+AGG | 0.600510 | 5.3:-80477869 | None:intergenic |
| ATAGGTTTCTGCAGATGACA+AGG | 0.602576 | 5.3:+80478854 | MS.gene75802:intron |
| TCTTCAGCTAAAGCTTGACC+TGG | 0.612094 | 5.3:-80481909 | None:intergenic |
| AAATTCTGTAAGGCAACTCT+CGG | 0.613403 | 5.3:+80479630 | MS.gene75802:CDS |
| TGTCAATTTGTCAGAGCTGG+TGG | 0.614230 | 5.3:+80477837 | MS.gene75802:CDS |
| AAGGTGGACAGTTAATGGAG+AGG | 0.614763 | 5.3:+80478284 | MS.gene75802:CDS |
| TGGTGGAAAGTGGTAATGAA+TGG | 0.627860 | 5.3:-80477916 | None:intergenic |
| TGACCAGCCCAACCACATGT+AGG | 0.639589 | 5.3:-80478742 | None:intergenic |
| TGGTTGCAAGTACAGAACAA+TGG | 0.639955 | 5.3:+80480529 | MS.gene75802:CDS |
| ATAATGATAATAGGTTGAGG+GGG | 0.644644 | 5.3:+80481223 | MS.gene75802:intron |
| GCCTAGGTTCTCAAATACAT+GGG | 0.646477 | 5.3:+80482723 | MS.gene75802:intron |
| AATTGTGTTAGTGTTCCTGA+TGG | 0.656404 | 5.3:+80481284 | MS.gene75802:CDS |
| ACTGGACAATAAACCTGATG+AGG | 0.661447 | 5.3:+80478878 | MS.gene75802:CDS |
| TTGTCTAAGCTGATACCAAG+AGG | 0.662148 | 5.3:-80478122 | None:intergenic |
| ATACTGCATATCAATACCTG+TGG | 0.667697 | 5.3:+80481726 | MS.gene75802:CDS |
| GCTACCGATAATGATCCACC+AGG | 0.671318 | 5.3:+80481891 | MS.gene75802:CDS |
| GTAGTGAATTTGCAATCTGG+AGG | 0.685376 | 5.3:+80478710 | MS.gene75802:intron |
| ACAGGGAAAAGTTATAGACA+AGG | 0.702128 | 5.3:+80481051 | MS.gene75802:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAAAAATAGTATAA+TGG | - | chr5.3:80479321-80479340 | None:intergenic | 10.0% |
| !!! | TCTAAAAAAAAATAGATTTT+GGG | - | chr5.3:80480101-80480120 | None:intergenic | 10.0% |
| !!! | TTCTAAAAAAAAATAGATTT+TGG | - | chr5.3:80480102-80480121 | None:intergenic | 10.0% |
| !! | AAAAATGTAAAACAAGATAT+CGG | - | chr5.3:80479690-80479709 | None:intergenic | 15.0% |
| !! | AAATATATAATTGAAAGAGA+AGG | - | chr5.3:80481799-80481818 | None:intergenic | 15.0% |
| !! | ACATTTATATTCATTTAAGA+TGG | - | chr5.3:80479447-80479466 | None:intergenic | 15.0% |
| !! | ATTTATAAAAAACACTAGTA+AGG | - | chr5.3:80480222-80480241 | None:intergenic | 15.0% |
| !! | CTTAAATGAATATAAATGTA+TGG | + | chr5.3:80479448-80479467 | MS.gene75802:intron | 15.0% |
| !! | GAAAATTATCAAAATAATAG+AGG | + | chr5.3:80479230-80479249 | MS.gene75802:intron | 15.0% |
| !! | TAAAATAATTTGAATACCTT+AGG | - | chr5.3:80478930-80478949 | None:intergenic | 15.0% |
| !! | TTGAATCAATTATGTTAATT+AGG | - | chr5.3:80480741-80480760 | None:intergenic | 15.0% |
| !!! | ATCTTGTTTTACATTTTTTT+TGG | + | chr5.3:80479692-80479711 | MS.gene75802:intron | 15.0% |
| !!! | ATTCAAATGCTAAATTTTTT+TGG | + | chr5.3:80481025-80481044 | MS.gene75802:intron | 15.0% |
| !!! | TAATTTTCATTAACAATTTG+AGG | - | chr5.3:80479218-80479237 | None:intergenic | 15.0% |
| !!! | TATAGTTTGATAATGATAAT+AGG | + | chr5.3:80481214-80481233 | MS.gene75802:intron | 15.0% |
| !!! | TTTCTTTATTTTTTAATGTC+AGG | + | chr5.3:80482480-80482499 | MS.gene75802:intron | 15.0% |
| !! | AAATGAAGATAACTTCAAAA+AGG | + | chr5.3:80481175-80481194 | MS.gene75802:intron | 20.0% |
| !! | AATGAAGATAACTTCAAAAA+GGG | + | chr5.3:80481176-80481195 | MS.gene75802:intron | 20.0% |
| !! | ACACATATAAATAGAGTAAA+TGG | - | chr5.3:80478671-80478690 | None:intergenic | 20.0% |
| !! | AGATAAAATGCAACTAATAA+AGG | - | chr5.3:80479139-80479158 | None:intergenic | 20.0% |
| !! | TAAATCCTAACGTATAAAAA+TGG | - | chr5.3:80480285-80480304 | None:intergenic | 20.0% |
| !! | TACATATAATCATTCAATTG+TGG | + | chr5.3:80482693-80482712 | MS.gene75802:intron | 20.0% |
| !! | TAGCATTTGAATTAAAATCA+GGG | - | chr5.3:80481017-80481036 | None:intergenic | 20.0% |
| !! | TCAAAAATAGAACTTCATTA+AGG | + | chr5.3:80478801-80478820 | MS.gene75802:intron | 20.0% |
| !! | TCTATAAAATTACTTATCCA+GGG | + | chr5.3:80478570-80478589 | MS.gene75802:intron | 20.0% |
| !! | TGAAAGAAATAAAGGAAAAT+GGG | - | chr5.3:80479888-80479907 | None:intergenic | 20.0% |
| !! | TTAGCATTTGAATTAAAATC+AGG | - | chr5.3:80481018-80481037 | None:intergenic | 20.0% |
| !! | TTCATTTATTTAGTTGGATA+TGG | - | chr5.3:80482400-80482419 | None:intergenic | 20.0% |
| !!! | ATTTTATCTGAAGTAAACAT+AGG | + | chr5.3:80479150-80479169 | MS.gene75802:intron | 20.0% |
| !!! | CTTTTACCTATAAACAAAAT+GGG | + | chr5.3:80480498-80480517 | MS.gene75802:CDS | 20.0% |
| !!! | GAACATTTTAAAAGTATATG+AGG | - | chr5.3:80479971-80479990 | None:intergenic | 20.0% |
| !!! | TATATATTTCTAGATCAGAA+GGG | + | chr5.3:80481810-80481829 | MS.gene75802:intron | 20.0% |
| !!! | TATGTTTTTCCAAAATCATT+AGG | + | chr5.3:80480065-80480084 | MS.gene75802:intron | 20.0% |
| !!! | TATTTTTCATGTTCATAGTA+AGG | + | chr5.3:80481977-80481996 | MS.gene75802:intron | 20.0% |
| !!! | TCACTTGAAATTTTGAAATA+AGG | + | chr5.3:80479255-80479274 | MS.gene75802:intron | 20.0% |
| !!! | TGATTACTATTGATTATTCT+CGG | + | chr5.3:80479063-80479082 | MS.gene75802:intron | 20.0% |
| !!! | TTATATATTTCTAGATCAGA+AGG | + | chr5.3:80481809-80481828 | MS.gene75802:intron | 20.0% |
| !!! | TTATTCCAAAAGTCTTATTT+AGG | + | chr5.3:80479024-80479043 | MS.gene75802:intron | 20.0% |
| !!! | TTATTTTATTCAGTTTCAGA+AGG | + | chr5.3:80478942-80478961 | MS.gene75802:intron | 20.0% |
| !!! | TTGAAACATGTATTTTAGAT+GGG | - | chr5.3:80481647-80481666 | None:intergenic | 20.0% |
| !!! | TTTAAATTGTTTTGTGAAGA+TGG | + | chr5.3:80478035-80478054 | MS.gene75802:intron | 20.0% |
| !!! | TTTTATCTGAAGTAAACATA+GGG | + | chr5.3:80479151-80479170 | MS.gene75802:intron | 20.0% |
| ! | AACCATCCAATTTAAATCAA+TGG | - | chr5.3:80482248-80482267 | None:intergenic | 25.0% |
| ! | AAGTTAAGAACTAACTAGTT+AGG | - | chr5.3:80480442-80480461 | None:intergenic | 25.0% |
| ! | AATCATTCAATTGTGGTTAA+TGG | + | chr5.3:80482700-80482719 | MS.gene75802:intron | 25.0% |
| ! | AGACAAATAGATTATGATGA+TGG | - | chr5.3:80481616-80481635 | None:intergenic | 25.0% |
| ! | ATAAAAAACACTAGTAAGGA+GGG | - | chr5.3:80480218-80480237 | None:intergenic | 25.0% |
| ! | ATCATTCAATTGTGGTTAAT+GGG | + | chr5.3:80482701-80482720 | MS.gene75802:intron | 25.0% |
| ! | ATGGAAATATTTGCTCTATA+TGG | - | chr5.3:80482381-80482400 | None:intergenic | 25.0% |
| ! | ATTTCCAACAAAAGAAGATA+TGG | - | chr5.3:80481151-80481170 | None:intergenic | 25.0% |
| ! | CATATGAAAATGTATATGCT+TGG | - | chr5.3:80480941-80480960 | None:intergenic | 25.0% |
| ! | CATCACAGTAAATATTTACT+AGG | - | chr5.3:80481562-80481581 | None:intergenic | 25.0% |
| ! | GAACATGAAAAATAAATGAC+AGG | - | chr5.3:80481971-80481990 | None:intergenic | 25.0% |
| ! | GACAACATTGTAAAAAAGTA+AGG | - | chr5.3:80480309-80480328 | None:intergenic | 25.0% |
| ! | GACAATTTATGACAAAAAGA+AGG | - | chr5.3:80479003-80479022 | None:intergenic | 25.0% |
| ! | GATTGAAGAGATAAAACAAT+TGG | - | chr5.3:80481670-80481689 | None:intergenic | 25.0% |
| ! | GTATAATTTCATAACCAGTT+AGG | + | chr5.3:80480666-80480685 | MS.gene75802:intron | 25.0% |
| ! | GTCTATAAAATTACTTATCC+AGG | + | chr5.3:80478569-80478588 | MS.gene75802:intron | 25.0% |
| ! | GTGAAAGAAATAAAGGAAAA+TGG | - | chr5.3:80479889-80479908 | None:intergenic | 25.0% |
| ! | TAAAATATTGAAGCACAAAG+TGG | + | chr5.3:80478097-80478116 | MS.gene75802:CDS | 25.0% |
| ! | TATAAAAAACACTAGTAAGG+AGG | - | chr5.3:80480219-80480238 | None:intergenic | 25.0% |
| ! | TGTGTCTTCATTTATTTAGT+TGG | - | chr5.3:80482406-80482425 | None:intergenic | 25.0% |
| !! | AAAGACCTAAATAAGACTTT+TGG | - | chr5.3:80479032-80479051 | None:intergenic | 25.0% |
| !! | AAAGCTAATCCTAATGATTT+TGG | - | chr5.3:80480077-80480096 | None:intergenic | 25.0% |
| !! | AAGACACAATATGGATTTTA+GGG | + | chr5.3:80479992-80480011 | MS.gene75802:intron | 25.0% |
| !! | ATAACACAAACCTTTTCTAT+TGG | - | chr5.3:80481344-80481363 | None:intergenic | 25.0% |
| !! | ATGCAATTGTCACTTAAAAA+TGG | - | chr5.3:80480037-80480056 | None:intergenic | 25.0% |
| !! | CTAAGAAAATGAACTTTTCA+TGG | + | chr5.3:80482614-80482633 | MS.gene75802:intron | 25.0% |
| !! | GCTTTTACCTATAAACAAAA+TGG | + | chr5.3:80480497-80480516 | MS.gene75802:CDS | 25.0% |
| !! | TAAATGGTCATTACTCATTT+TGG | - | chr5.3:80478655-80478674 | None:intergenic | 25.0% |
| !! | TAAGACACAATATGGATTTT+AGG | + | chr5.3:80479991-80480010 | MS.gene75802:intron | 25.0% |
| !! | TCTCTATATTTGATTCCTTT+TGG | + | chr5.3:80482586-80482605 | MS.gene75802:intron | 25.0% |
| !! | TGATAATGATAATAGGTTGA+GGG | + | chr5.3:80481221-80481240 | MS.gene75802:intron | 25.0% |
| !! | TTACATTTTACTTGATTACG+TGG | + | chr5.3:80478829-80478848 | MS.gene75802:intron | 25.0% |
| !! | TTGTAAATATTTTATGTGCG+TGG | + | chr5.3:80480401-80480420 | MS.gene75802:intron | 25.0% |
| !!! | AAATGTTCTAAGACACAATA+TGG | + | chr5.3:80479983-80480002 | MS.gene75802:intron | 25.0% |
| !!! | AACCATTGATTTAAATTGGA+TGG | + | chr5.3:80482243-80482262 | MS.gene75802:intron | 25.0% |
| !!! | AATCAACCCATTTTGTTTAT+AGG | - | chr5.3:80480507-80480526 | None:intergenic | 25.0% |
| !!! | ACTCATTTTGGTTCTTAAAT+GGG | - | chr5.3:80478643-80478662 | None:intergenic | 25.0% |
| !!! | AGTTTGATTTGATACATTCA+AGG | + | chr5.3:80478604-80478623 | MS.gene75802:intron | 25.0% |
| !!! | ATTTTTTTGGAGGATTAATG+TGG | + | chr5.3:80480875-80480894 | MS.gene75802:intron | 25.0% |
| !!! | CTAAATTTTTTTGGTGTACA+GGG | + | chr5.3:80481034-80481053 | MS.gene75802:intron | 25.0% |
| !!! | GAAATTTTGAAATAAGGTTC+AGG | + | chr5.3:80479261-80479280 | MS.gene75802:intron | 25.0% |
| !!! | GTTGAAACATGTATTTTAGA+TGG | - | chr5.3:80481648-80481667 | None:intergenic | 25.0% |
| !!! | TACTCATTTTGGTTCTTAAA+TGG | - | chr5.3:80478644-80478663 | None:intergenic | 25.0% |
| !!! | TATTTTTTAATGTCAGGTGT+TGG | + | chr5.3:80482486-80482505 | MS.gene75802:intron | 25.0% |
| !!! | TCTCAACCATTGATTTAAAT+TGG | + | chr5.3:80482239-80482258 | MS.gene75802:intron | 25.0% |
| !!! | TTGATAATGATAATAGGTTG+AGG | + | chr5.3:80481220-80481239 | MS.gene75802:intron | 25.0% |
| !!! | TTTGACCATTTTTATACGTT+AGG | + | chr5.3:80480277-80480296 | MS.gene75802:intron | 25.0% |
| AACAAGCTAAAATAGGGAAA+AGG | - | chr5.3:80479566-80479585 | None:intergenic | 30.0% | |
| AACAGAAGACACAATATTTG+AGG | - | chr5.3:80478507-80478526 | None:intergenic | 30.0% | |
| AAGAAATAAAGGAAAATGGG+AGG | - | chr5.3:80479885-80479904 | None:intergenic | 30.0% | |
| AATAGAAATCTCTCCTCATT+TGG | - | chr5.3:80479832-80479851 | None:intergenic | 30.0% | |
| AATGTAAAACAAGATATCGG+AGG | - | chr5.3:80479687-80479706 | None:intergenic | 30.0% | |
| ACCAAATACATTGAAAAGAC+TGG | - | chr5.3:80478241-80478260 | None:intergenic | 30.0% | |
| AGAAATAAAGGAAAATGGGA+GGG | - | chr5.3:80479884-80479903 | None:intergenic | 30.0% | |
| AGTAAGCAACAAGCTAAAAT+AGG | - | chr5.3:80479573-80479592 | None:intergenic | 30.0% | |
| ATAAGTATGGTATGTTCAAG+TGG | + | chr5.3:80479400-80479419 | MS.gene75802:intron | 30.0% | |
| ATAGAAATCTCTCCTCATTT+GGG | - | chr5.3:80479831-80479850 | None:intergenic | 30.0% | |
| ATTCCAATAGTAAGAGATAG+AGG | - | chr5.3:80480178-80480197 | None:intergenic | 30.0% | |
| CAACAAAAGAAGATATGGAT+GGG | - | chr5.3:80481146-80481165 | None:intergenic | 30.0% | |
| CTAGTCAGATTATTTGCTTA+TGG | + | chr5.3:80479536-80479555 | MS.gene75802:intron | 30.0% | |
| GGGGAACTTAAAAATTGTAT+TGG | - | chr5.3:80479810-80479829 | None:intergenic | 30.0% | |
| GTAAGCAACAAGCTAAAATA+GGG | - | chr5.3:80479572-80479591 | None:intergenic | 30.0% | |
| TAAGTATGGTATGTTCAAGT+GGG | + | chr5.3:80479401-80479420 | MS.gene75802:intron | 30.0% | |
| TACACTTACAGGATATGATT+AGG | - | chr5.3:80480335-80480354 | None:intergenic | 30.0% | |
| TACTGATGTTTGCATCATTA+AGG | - | chr5.3:80481585-80481604 | None:intergenic | 30.0% | |
| TCAGCAAGTGAAAGAAATAA+AGG | - | chr5.3:80479896-80479915 | None:intergenic | 30.0% | |
| TCATTAATGCCACACAATAA+AGG | - | chr5.3:80480701-80480720 | None:intergenic | 30.0% | |
| TTACTTGATTACGTGGTTAT+AGG | + | chr5.3:80478836-80478855 | MS.gene75802:intron | 30.0% | |
| TTGCATTCTCTTGAAATATC+TGG | + | chr5.3:80482355-80482374 | MS.gene75802:intron | 30.0% | |
| ! | ATAATGATAATAGGTTGAGG+GGG | + | chr5.3:80481223-80481242 | MS.gene75802:intron | 30.0% |
| ! | ATTTTCTTAGAAGCTCCAAA+AGG | - | chr5.3:80482604-80482623 | None:intergenic | 30.0% |
| ! | CTTCATAGATTGCACTTTTA+AGG | + | chr5.3:80481536-80481555 | MS.gene75802:intron | 30.0% |
| ! | CTTTTCACATTATCACTGAT+GGG | + | chr5.3:80478314-80478333 | MS.gene75802:CDS | 30.0% |
| ! | GAACAATGGAGAAAAGATTT+TGG | + | chr5.3:80480543-80480562 | MS.gene75802:CDS | 30.0% |
| ! | GATAATGATAATAGGTTGAG+GGG | + | chr5.3:80481222-80481241 | MS.gene75802:intron | 30.0% |
| ! | TCTTTTCACATTATCACTGA+TGG | + | chr5.3:80478313-80478332 | MS.gene75802:CDS | 30.0% |
| ! | TTTTTGATATGCCAGTGTAA+AGG | + | chr5.3:80478265-80478284 | MS.gene75802:intron | 30.0% |
| !! | AAACAAAATGGGTTGATTGT+TGG | + | chr5.3:80480509-80480528 | MS.gene75802:CDS | 30.0% |
| !! | ATTGTTTTGTGAAGATGGTT+TGG | + | chr5.3:80478040-80478059 | MS.gene75802:intron | 30.0% |
| !! | CAAATTTTAACATGCAAGCA+TGG | - | chr5.3:80480591-80480610 | None:intergenic | 30.0% |
| !! | TTAGCTTGTTGCTTACTTTA+AGG | + | chr5.3:80479576-80479595 | MS.gene75802:intron | 30.0% |
| !! | TTTTGACTAATAGTTCTCCT+TGG | + | chr5.3:80480148-80480167 | MS.gene75802:intron | 30.0% |
| !!! | ACGGAAAAGAATTTTTTTGG+AGG | + | chr5.3:80480865-80480884 | MS.gene75802:intron | 30.0% |
| !!! | ACTTGTTTGTTTTGAGGTTT+TGG | + | chr5.3:80478349-80478368 | MS.gene75802:intron | 30.0% |
| !!! | GAAGTTCTATTTTTGAGAAC+AGG | - | chr5.3:80478797-80478816 | None:intergenic | 30.0% |
| !!! | GAGACGGAAAAGAATTTTTT+TGG | + | chr5.3:80480862-80480881 | MS.gene75802:intron | 30.0% |
| !!! | GCTAAATTTTTTTGGTGTAC+AGG | + | chr5.3:80481033-80481052 | MS.gene75802:intron | 30.0% |
| !!! | TCTTCAACTTGTTTGTTTTG+AGG | + | chr5.3:80478343-80478362 | MS.gene75802:intron | 30.0% |
| !!! | TTTTGAGGTTTTGGTGATAT+TGG | + | chr5.3:80478358-80478377 | MS.gene75802:intron | 30.0% |
| AAATGGTCAAATCTCGTCTT+AGG | - | chr5.3:80480268-80480287 | None:intergenic | 35.0% | |
| AAATTCTGTAAGGCAACTCT+CGG | + | chr5.3:80479630-80479649 | MS.gene75802:CDS | 35.0% | |
| AAGCTGAGTTCATCTTTCTT+TGG | - | chr5.3:80482524-80482543 | None:intergenic | 35.0% | |
| AATACATTGCAGTAGTAGTG+TGG | + | chr5.3:80479367-80479386 | MS.gene75802:intron | 35.0% | |
| AATTGTGTTAGTGTTCCTGA+TGG | + | chr5.3:80481284-80481303 | MS.gene75802:CDS | 35.0% | |
| AATTTCATAACCAGTTAGGC+AGG | + | chr5.3:80480670-80480689 | MS.gene75802:intron | 35.0% | |
| ACAAGCAAAAGATACACTTG+GGG | - | chr5.3:80478475-80478494 | None:intergenic | 35.0% | |
| ACAGGGAAAAGTTATAGACA+AGG | + | chr5.3:80481051-80481070 | MS.gene75802:intron | 35.0% | |
| ATACTGCATATCAATACCTG+TGG | + | chr5.3:80481726-80481745 | MS.gene75802:CDS | 35.0% | |
| ATAGCATTGCATACACTTAC+AGG | - | chr5.3:80480346-80480365 | None:intergenic | 35.0% | |
| ATATTTGGAGGACCAATTAG+AGG | + | chr5.3:80480908-80480927 | MS.gene75802:intron | 35.0% | |
| ATGCAAATGAGGTATAACTC+AGG | + | chr5.3:80482552-80482571 | MS.gene75802:intron | 35.0% | |
| ATGCTTGTCTTTATGAAGTC+AGG | + | chr5.3:80481703-80481722 | MS.gene75802:intron | 35.0% | |
| ATGGATGGGAAAATAGGTTT+AGG | - | chr5.3:80481132-80481151 | None:intergenic | 35.0% | |
| CAAACTTTCAAAAACATCCC+TGG | - | chr5.3:80478590-80478609 | None:intergenic | 35.0% | |
| CACTGTTGAATTTCTGATCT+GGG | + | chr5.3:80477960-80477979 | MS.gene75802:intron | 35.0% | |
| CCAACAAAAGAAGATATGGA+TGG | - | chr5.3:80481147-80481166 | None:intergenic | 35.0% | |
| CCTTAAGCAGAAATTCTGTA+AGG | + | chr5.3:80479620-80479639 | MS.gene75802:CDS | 35.0% | |
| CCTTACAGAATTTCTGCTTA+AGG | - | chr5.3:80479623-80479642 | None:intergenic | 35.0% | |
| CTTCCTCTATCTCTTACTAT+TGG | + | chr5.3:80480172-80480191 | MS.gene75802:intron | 35.0% | |
| CTTCTTCAATGATGCAAATG+AGG | + | chr5.3:80482541-80482560 | MS.gene75802:CDS | 35.0% | |
| GAAATAAAGGAAAATGGGAG+GGG | - | chr5.3:80479883-80479902 | None:intergenic | 35.0% | |
| GAAGATATGGATGGGAAAAT+AGG | - | chr5.3:80481138-80481157 | None:intergenic | 35.0% | |
| GACAAGCAAAAGATACACTT+GGG | - | chr5.3:80478476-80478495 | None:intergenic | 35.0% | |
| GACATATTCAAGGATCGAAA+TGG | - | chr5.3:80478405-80478424 | None:intergenic | 35.0% | |
| GGCAATGTATTAACTCAACA+TGG | - | chr5.3:80479505-80479524 | None:intergenic | 35.0% | |
| GTGTCTTCTGTTAGTTAGTT+TGG | + | chr5.3:80478515-80478534 | MS.gene75802:intron | 35.0% | |
| GTTATAGACAAGGTCCTTTA+TGG | + | chr5.3:80481061-80481080 | MS.gene75802:CDS | 35.0% | |
| GTTGTAGTGAATTTGCAATC+TGG | + | chr5.3:80478707-80478726 | MS.gene75802:intron | 35.0% | |
| TAATGTCGTCAAGTCCATAA+AGG | - | chr5.3:80481078-80481097 | None:intergenic | 35.0% | |
| TAATTGGTCCTCCAAATATC+AGG | - | chr5.3:80480907-80480926 | None:intergenic | 35.0% | |
| TAGAAATCTCTCCTCATTTG+GGG | - | chr5.3:80479830-80479849 | None:intergenic | 35.0% | |
| TATTTGGAGGACCAATTAGA+GGG | + | chr5.3:80480909-80480928 | MS.gene75802:intron | 35.0% | |
| TCTCTCTACTCAACCAAAAT+GGG | + | chr5.3:80477986-80478005 | MS.gene75802:intron | 35.0% | |
| TGACAAGCAAAAGATACACT+TGG | - | chr5.3:80478477-80478496 | None:intergenic | 35.0% | |
| TGATAAGCTTTCACTTGAAG+AGG | + | chr5.3:80481250-80481269 | MS.gene75802:CDS | 35.0% | |
| TGATGACTATACGTTAGAGA+CGG | + | chr5.3:80480846-80480865 | MS.gene75802:intron | 35.0% | |
| TGGATGGGAAAATAGGTTTA+GGG | - | chr5.3:80481131-80481150 | None:intergenic | 35.0% | |
| TTATAGACCATGCTGACAAT+TGG | - | chr5.3:80478557-80478576 | None:intergenic | 35.0% | |
| TTGAGGTGCAATTAATCGTT+GGG | - | chr5.3:80482099-80482118 | None:intergenic | 35.0% | |
| ! | ACACAAACCTTTTCTATTGG+TGG | - | chr5.3:80481341-80481360 | None:intergenic | 35.0% |
| ! | CCATCCATATCTTCTTTTGT+TGG | + | chr5.3:80481144-80481163 | MS.gene75802:intron | 35.0% |
| ! | CTCTGCAATCGATTTATGAT+CGG | + | chr5.3:80482176-80482195 | MS.gene75802:intron | 35.0% |
| ! | GAAAACTACATGACCCATTT+TGG | - | chr5.3:80478002-80478021 | None:intergenic | 35.0% |
| ! | GATACACTTGGGGATATTTT+TGG | - | chr5.3:80478465-80478484 | None:intergenic | 35.0% |
| ! | GCCAGTCTTTTCAATGTATT+TGG | + | chr5.3:80478237-80478256 | MS.gene75802:intron | 35.0% |
| ! | GCTACCTCATTCTGAAAAAT+TGG | - | chr5.3:80478979-80478998 | None:intergenic | 35.0% |
| ! | TCTGCAATCGATTTATGATC+GGG | + | chr5.3:80482177-80482196 | MS.gene75802:intron | 35.0% |
| ! | TTCCTTTCTCCCATTCTTTT+AGG | + | chr5.3:80481851-80481870 | MS.gene75802:intron | 35.0% |
| ! | TTTTAGACCTACATGTGGTT+GGG | + | chr5.3:80478735-80478754 | MS.gene75802:CDS | 35.0% |
| !! | AATGGAGAAAAGATTTTGGC+AGG | + | chr5.3:80480547-80480566 | MS.gene75802:CDS | 35.0% |
| !! | ACACTTAAGCTTTGTTTGCA+AGG | - | chr5.3:80479945-80479964 | None:intergenic | 35.0% |
| !! | ACTGCCAATTTTTCAGAATG+AGG | + | chr5.3:80478972-80478991 | MS.gene75802:intron | 35.0% |
| !! | ACTTAAGCTTTGTTTGCAAG+GGG | - | chr5.3:80479943-80479962 | None:intergenic | 35.0% |
| !! | AGGTTTTGGTGATATTGGTA+TGG | + | chr5.3:80478363-80478382 | MS.gene75802:intron | 35.0% |
| !! | CACTTAAGCTTTGTTTGCAA+GGG | - | chr5.3:80479944-80479963 | None:intergenic | 35.0% |
| !! | GTTAATACATTGCCACTTTC+AGG | + | chr5.3:80479511-80479530 | MS.gene75802:intron | 35.0% |
| !! | TCTTTTGAAGATACCTTTCC+TGG | - | chr5.3:80481314-80481333 | None:intergenic | 35.0% |
| !! | TGGTCAATGGTTGATAAGTA+TGG | + | chr5.3:80479387-80479406 | MS.gene75802:intron | 35.0% |
| !! | TGTGAGTTATGAGTATTGAG+TGG | + | chr5.3:80479109-80479128 | MS.gene75802:intron | 35.0% |
| !!! | GGACGAAAAGGTATTTTCAA+TGG | + | chr5.3:80479651-80479670 | MS.gene75802:intron | 35.0% |
| !!! | TTTTGGTTCTTAAATGGGTG+AGG | - | chr5.3:80478638-80478657 | None:intergenic | 35.0% |
| !!! | TTTTTAAGTTCCCCCAAATG+AGG | + | chr5.3:80479816-80479835 | MS.gene75802:intron | 35.0% |
| AAGCCGAGTTCATCTTTCTT+AGG | - | chr5.3:80482454-80482473 | None:intergenic | 40.0% | |
| ACAATGCGTTAAGCAGTTGA+GGG | - | chr5.3:80482315-80482334 | None:intergenic | 40.0% | |
| ACACCAACATGACACTTACA+CGG | - | chr5.3:80481499-80481518 | None:intergenic | 40.0% | |
| ACTGGACAATAAACCTGATG+AGG | + | chr5.3:80478878-80478897 | MS.gene75802:CDS | 40.0% | |
| AGAAATCTCTCCTCATTTGG+GGG | - | chr5.3:80479829-80479848 | None:intergenic | 40.0% | |
| AGATCTGCCACCAATAGAAA+AGG | + | chr5.3:80481331-80481350 | MS.gene75802:CDS | 40.0% | |
| AGTAGCACAGACACTTCTAA+GGG | + | chr5.3:80481391-80481410 | MS.gene75802:intron | 40.0% | |
| ATAGCTAGGTGGAAGAAAAG+TGG | - | chr5.3:80478195-80478214 | None:intergenic | 40.0% | |
| ATAGGTTTCTGCAGATGACA+AGG | + | chr5.3:80478854-80478873 | MS.gene75802:intron | 40.0% | |
| ATGAAGACACATCCTGAATC+CGG | + | chr5.3:80482415-80482434 | MS.gene75802:intron | 40.0% | |
| ATGAATGGCACCAAAACCTT+TGG | - | chr5.3:80477904-80477923 | None:intergenic | 40.0% | |
| ATGCGAACCACCTAAAAGAA+TGG | - | chr5.3:80481864-80481883 | None:intergenic | 40.0% | |
| CACCTAAAAGAATGGGAGAA+AGG | - | chr5.3:80481856-80481875 | None:intergenic | 40.0% | |
| CAGCAAAGCTTACTTGGATA+AGG | + | chr5.3:80481751-80481770 | MS.gene75802:CDS | 40.0% | |
| CCACTGTTGAATTTCTGATC+TGG | + | chr5.3:80477959-80477978 | MS.gene75802:intron | 40.0% | |
| CCAGATCAGAAATTCAACAG+TGG | - | chr5.3:80477962-80477981 | None:intergenic | 40.0% | |
| CTCTCTCTACTCAACCAAAA+TGG | + | chr5.3:80477985-80478004 | MS.gene75802:intron | 40.0% | |
| CTTGGAGTAAACCCTCTAAT+TGG | - | chr5.3:80480923-80480942 | None:intergenic | 40.0% | |
| GACAACGTCTGACATATTCA+AGG | - | chr5.3:80478415-80478434 | None:intergenic | 40.0% | |
| GACTTAAGCTGCAAGTAACA+GGG | + | chr5.3:80478215-80478234 | MS.gene75802:intron | 40.0% | |
| GATTGAACGTAATCACGTGT+CGG | - | chr5.3:80481439-80481458 | None:intergenic | 40.0% | |
| GCCTAGGTTCTCAAATACAT+GGG | + | chr5.3:80482723-80482742 | MS.gene75802:intron | 40.0% | |
| GGAAGAAAAGTGGATACCTT+TGG | - | chr5.3:80478185-80478204 | None:intergenic | 40.0% | |
| GGACCTAAGAAAGATGAACT+CGG | + | chr5.3:80482448-80482467 | MS.gene75802:intron | 40.0% | |
| GGATTTGACCCTTGAACATA+AGG | - | chr5.3:80479300-80479319 | None:intergenic | 40.0% | |
| GTAGTGAATTTGCAATCTGG+AGG | + | chr5.3:80478710-80478729 | MS.gene75802:intron | 40.0% | |
| GTGCACATAGTATGTTGCAT+GGG | + | chr5.3:80482037-80482056 | MS.gene75802:intron | 40.0% | |
| GTGTAAAGGTGGACAGTTAA+TGG | + | chr5.3:80478279-80478298 | MS.gene75802:intron | 40.0% | |
| GTTGAGGTGCAATTAATCGT+TGG | - | chr5.3:80482100-80482119 | None:intergenic | 40.0% | |
| TAAGAGATAGAGGAAGACCA+AGG | - | chr5.3:80480168-80480187 | None:intergenic | 40.0% | |
| TCATTACCACTTTCCACCAA+AGG | + | chr5.3:80477920-80477939 | MS.gene75802:CDS | 40.0% | |
| TCCCATGTATTTGAGAACCT+AGG | - | chr5.3:80482727-80482746 | None:intergenic | 40.0% | |
| TGAATGGCACCAAAACCTTT+GGG | - | chr5.3:80477903-80477922 | None:intergenic | 40.0% | |
| TGACTTAAGCTGCAAGTAAC+AGG | + | chr5.3:80478214-80478233 | MS.gene75802:intron | 40.0% | |
| TGCGAACCACCTAAAAGAAT+GGG | - | chr5.3:80481863-80481882 | None:intergenic | 40.0% | |
| TGGATACCTTTGGACAAAAG+AGG | - | chr5.3:80478175-80478194 | None:intergenic | 40.0% | |
| TGGTTGCAAGTACAGAACAA+TGG | + | chr5.3:80480529-80480548 | MS.gene75802:CDS | 40.0% | |
| TGTGGTTACAGCCTGATATT+TGG | + | chr5.3:80480893-80480912 | MS.gene75802:intron | 40.0% | |
| TTAACTGTCCACCTTTACAC+TGG | - | chr5.3:80478279-80478298 | None:intergenic | 40.0% | |
| TTGACCCTTGAACATAAGGA+GGG | - | chr5.3:80479296-80479315 | None:intergenic | 40.0% | |
| TTGATATGCCAGTGTAAAGG+TGG | + | chr5.3:80478268-80478287 | MS.gene75802:intron | 40.0% | |
| TTGATTATTCTCGGAGCACA+AGG | + | chr5.3:80479072-80479091 | MS.gene75802:intron | 40.0% | |
| TTGCAGCTTAAGTCATAGCT+AGG | - | chr5.3:80478209-80478228 | None:intergenic | 40.0% | |
| TTGTCTAAGCTGATACCAAG+AGG | - | chr5.3:80478125-80478144 | None:intergenic | 40.0% | |
| TTTGACCCTTGAACATAAGG+AGG | - | chr5.3:80479297-80479316 | None:intergenic | 40.0% | |
| ! | AAACAGAAGCGGTTCTGATA+AGG | - | chr5.3:80479474-80479493 | None:intergenic | 40.0% |
| ! | ATCAGAACCGCTTCTGTTTT+TGG | + | chr5.3:80479475-80479494 | MS.gene75802:intron | 40.0% |
| ! | CTTTCTCCCATTCTTTTAGG+TGG | + | chr5.3:80481854-80481873 | MS.gene75802:intron | 40.0% |
| ! | GGTGATATTGGTATGGACTA+TGG | + | chr5.3:80478370-80478389 | MS.gene75802:intron | 40.0% |
| ! | GTGTTTTCCAATTGTCAGCA+TGG | + | chr5.3:80478547-80478566 | MS.gene75802:intron | 40.0% |
| ! | TAGACAACTCTTGTTTGCCT+GGG | + | chr5.3:80478138-80478157 | MS.gene75802:CDS | 40.0% |
| ! | TGGTGGAAAGTGGTAATGAA+TGG | - | chr5.3:80477919-80477938 | None:intergenic | 40.0% |
| ! | TTAGACAACTCTTGTTTGCC+TGG | + | chr5.3:80478137-80478156 | MS.gene75802:CDS | 40.0% |
| ! | TTGACCTGGTGGATCATTAT+CGG | - | chr5.3:80481898-80481917 | None:intergenic | 40.0% |
| !! | AGGTGTTTTAGACCTACATG+TGG | + | chr5.3:80478730-80478749 | MS.gene75802:CDS | 40.0% |
| !! | GAGAAAAGTGATTTGGTGAG+AGG | - | chr5.3:80477872-80477891 | None:intergenic | 40.0% |
| !! | GTTTTAGACCTACATGTGGT+TGG | + | chr5.3:80478734-80478753 | MS.gene75802:CDS | 40.0% |
| !! | TATGTGCGTGGTTTAGTTCT+TGG | + | chr5.3:80480413-80480432 | MS.gene75802:intron | 40.0% |
| AAACCTGATGAGGAGAGCTT+AGG | + | chr5.3:80478888-80478907 | MS.gene75802:CDS | 45.0% | |
| AACCTGATGAGGAGAGCTTA+GGG | + | chr5.3:80478889-80478908 | MS.gene75802:CDS | 45.0% | |
| AAGCACAAAGTGGAACCTCT+TGG | + | chr5.3:80478107-80478126 | MS.gene75802:CDS | 45.0% | |
| AAGCTTTCACTTGAAGAGGC+TGG | + | chr5.3:80481254-80481273 | MS.gene75802:CDS | 45.0% | |
| AAGGTGGACAGTTAATGGAG+AGG | + | chr5.3:80478284-80478303 | MS.gene75802:CDS | 45.0% | |
| AGCTTAGGGTTGGAATCACT+TGG | + | chr5.3:80478903-80478922 | MS.gene75802:CDS | 45.0% | |
| AGTACGTACGTACGTACCTT+TGG | - | chr5.3:80477939-80477958 | None:intergenic | 45.0% | |
| AGTGGGTACCAAGGAAGTTA+AGG | + | chr5.3:80479418-80479437 | MS.gene75802:intron | 45.0% | |
| ATAAAGGAAAATGGGAGGGG+AGG | - | chr5.3:80479880-80479899 | None:intergenic | 45.0% | |
| ATCTGACTAGCACCTGAAAG+TGG | - | chr5.3:80479526-80479545 | None:intergenic | 45.0% | |
| ATTGTTACTGCAGGGAATCC+AGG | - | chr5.3:80482129-80482148 | None:intergenic | 45.0% | |
| CACAATGCGTTAAGCAGTTG+AGG | - | chr5.3:80482316-80482335 | None:intergenic | 45.0% | |
| CAGCTTAAGTCATAGCTAGG+TGG | - | chr5.3:80478206-80478225 | None:intergenic | 45.0% | |
| CAGGTGGTTCCTTTATTGTG+TGG | + | chr5.3:80480689-80480708 | MS.gene75802:intron | 45.0% | |
| CAGTAGCACAGACACTTCTA+AGG | + | chr5.3:80481390-80481409 | MS.gene75802:intron | 45.0% | |
| CATGCAAGCATGGTTTGAAC+TGG | - | chr5.3:80480581-80480600 | None:intergenic | 45.0% | |
| CCTTTGGACAAAAGAGGTTG+TGG | - | chr5.3:80478169-80478188 | None:intergenic | 45.0% | |
| CGTGCACATAGTATGTTGCA+TGG | + | chr5.3:80482036-80482055 | MS.gene75802:intron | 45.0% | |
| CTACAACACACAAACGCAAG+AGG | - | chr5.3:80478694-80478713 | None:intergenic | 45.0% | |
| CTACCCCTCCTTATGTTCAA+GGG | + | chr5.3:80479289-80479308 | MS.gene75802:intron | 45.0% | |
| CTTTAGCTGAAGAGCTAGCA+CGG | + | chr5.3:80481919-80481938 | MS.gene75802:CDS | 45.0% | |
| GATTGTTACGAGTAACTGCG+TGG | - | chr5.3:80482153-80482172 | None:intergenic | 45.0% | |
| GGCCTAGGTTCTCAAATACA+TGG | + | chr5.3:80482722-80482741 | MS.gene75802:intron | 45.0% | |
| GGTTACAGCCTGATATTTGG+AGG | + | chr5.3:80480896-80480915 | MS.gene75802:intron | 45.0% | |
| GTATGTTCAAGTGGGTACCA+AGG | + | chr5.3:80479409-80479428 | MS.gene75802:intron | 45.0% | |
| GTGGAACAGCAAAGCTTACT+TGG | + | chr5.3:80481745-80481764 | MS.gene75802:CDS | 45.0% | |
| GTTGGAATCACTTGGTCCTA+AGG | + | chr5.3:80478911-80478930 | MS.gene75802:CDS | 45.0% | |
| TACGTACCTTTGGTGGAAAG+TGG | - | chr5.3:80477929-80477948 | None:intergenic | 45.0% | |
| TCTACCCCTCCTTATGTTCA+AGG | + | chr5.3:80479288-80479307 | MS.gene75802:intron | 45.0% | |
| TCTTCAGCTAAAGCTTGACC+TGG | - | chr5.3:80481912-80481931 | None:intergenic | 45.0% | |
| TGACCCTTGAACATAAGGAG+GGG | - | chr5.3:80479295-80479314 | None:intergenic | 45.0% | |
| TGCAGTAGTAGTGTGGTCAA+TGG | + | chr5.3:80479374-80479393 | MS.gene75802:intron | 45.0% | |
| TGCGTGGTATTGTTACTGCA+GGG | - | chr5.3:80482137-80482156 | None:intergenic | 45.0% | |
| TGGACAGCCAAAAACAGAAG+CGG | - | chr5.3:80479485-80479504 | None:intergenic | 45.0% | |
| TGTCAATTTGTCAGAGCTGG+TGG | + | chr5.3:80477837-80477856 | MS.gene75802:CDS | 45.0% | |
| TGTCCGTGTAAGTGTCATGT+TGG | + | chr5.3:80481493-80481512 | MS.gene75802:intron | 45.0% | |
| TTAGGTGGTTCGCATTATCC+TGG | + | chr5.3:80481869-80481888 | MS.gene75802:intron | 45.0% | |
| TTCATAACCAGTTAGGCAGG+TGG | + | chr5.3:80480673-80480692 | MS.gene75802:intron | 45.0% | |
| TTCTGCAGATGACAAGGAAC+TGG | + | chr5.3:80478860-80478879 | MS.gene75802:CDS | 45.0% | |
| TTGGGGCGAGAAAAGTGATT+TGG | - | chr5.3:80477879-80477898 | None:intergenic | 45.0% | |
| ! | CAATTGTGGTTAATGGGCCT+AGG | + | chr5.3:80482707-80482726 | MS.gene75802:intron | 45.0% |
| ! | CACCAAAACCTTTGGGTTTG+GGG | - | chr5.3:80477896-80477915 | None:intergenic | 45.0% |
| ! | CCACAACCTCTTTTGTCCAA+AGG | + | chr5.3:80478166-80478185 | MS.gene75802:CDS | 45.0% |
| ! | CTTCTAAGGGAATGTGTGTC+CGG | + | chr5.3:80481404-80481423 | MS.gene75802:intron | 45.0% |
| ! | GATGGTAGCCTTAACTTCCT+TGG | - | chr5.3:80479429-80479448 | None:intergenic | 45.0% |
| ! | GCACCAAAACCTTTGGGTTT+GGG | - | chr5.3:80477897-80477916 | None:intergenic | 45.0% |
| !! | AAGCTTTGTTTGCAAGGGGA+AGG | - | chr5.3:80479939-80479958 | None:intergenic | 45.0% |
| !! | AGCTTTGTTTGCAAGGGGAA+GGG | - | chr5.3:80479938-80479957 | None:intergenic | 45.0% |
| !! | AGTAAGCTTTGCTGTTCCAC+AGG | - | chr5.3:80481745-80481764 | None:intergenic | 45.0% |
| !! | GAAGGGAGGCTTTGGAAAAA+AGG | - | chr5.3:80479921-80479940 | None:intergenic | 45.0% |
| !!! | ATGATTTTTTTTTTTTTTTT+TGG | + | chr5.3:80480958-80480977 | MS.gene75802:intron | 5.0% |
| AAAATGGGAGGGGAGGACTT+TGG | - | chr5.3:80479873-80479892 | None:intergenic | 50.0% | |
| AAAGGAACCACCTGCCTAAC+TGG | - | chr5.3:80480683-80480702 | None:intergenic | 50.0% | |
| AAATGGGAGGGGAGGACTTT+GGG | - | chr5.3:80479872-80479891 | None:intergenic | 50.0% | |
| AACCCTAAGCTCTCCTCATC+AGG | - | chr5.3:80478894-80478913 | None:intergenic | 50.0% | |
| AAGAGGTTGTGGTAGTTCCC+AGG | - | chr5.3:80478158-80478177 | None:intergenic | 50.0% | |
| AAGGCAACTCTCGGACGAAA+AGG | + | chr5.3:80479639-80479658 | MS.gene75802:CDS | 50.0% | |
| ACGTACGTACGTACCTTTGG+TGG | - | chr5.3:80477936-80477955 | None:intergenic | 50.0% | |
| CTGCGTGGTATTGTTACTGC+AGG | - | chr5.3:80482138-80482157 | None:intergenic | 50.0% | |
| CTTAGGTCCATTATGAGCGC+CGG | - | chr5.3:80482437-80482456 | None:intergenic | 50.0% | |
| GCTACCGATAATGATCCACC+AGG | + | chr5.3:80481891-80481910 | MS.gene75802:CDS | 50.0% | |
| GGAATCCAGGTCTGTAGTTG+AGG | - | chr5.3:80482116-80482135 | None:intergenic | 50.0% | |
| GTGGATCATTATCGGTAGCC+AGG | - | chr5.3:80481890-80481909 | None:intergenic | 50.0% | |
| TCAGCTAAAGCTTGACCTGG+TGG | - | chr5.3:80481909-80481928 | None:intergenic | 50.0% | |
| TGAATGACCTTTCTCGCCCA+AGG | - | chr5.3:80481947-80481966 | None:intergenic | 50.0% | |
| TGATGAGGAGAGCTTAGGGT+TGG | + | chr5.3:80478893-80478912 | MS.gene75802:CDS | 50.0% | |
| TTACACGGACACGTTGAGAC+TGG | - | chr5.3:80481484-80481503 | None:intergenic | 50.0% | |
| TTGCACCTCAACTACAGACC+TGG | + | chr5.3:80482108-80482127 | MS.gene75802:intron | 50.0% | |
| TTTGTTTGCAAGGGGAAGGG+AGG | - | chr5.3:80479935-80479954 | None:intergenic | 50.0% | |
| ! | ACGTAATCACGTGTCGGTGT+CGG | - | chr5.3:80481433-80481452 | None:intergenic | 50.0% |
| ! | GGCACCAAAACCTTTGGGTT+TGG | - | chr5.3:80477898-80477917 | None:intergenic | 50.0% |
| ! | TTTTCTCGCCCCAAACCCAA+AGG | + | chr5.3:80477885-80477904 | MS.gene75802:CDS | 50.0% |
| AATGGGAGGGGAGGACTTTG+GGG | - | chr5.3:80479871-80479890 | None:intergenic | 55.0% | |
| ACCTTTCCTGGTGCACCATC+AGG | - | chr5.3:80481302-80481321 | None:intergenic | 55.0% | |
| AGACCTACATGTGGTTGGGC+TGG | + | chr5.3:80478739-80478758 | MS.gene75802:CDS | 55.0% | |
| CCTGAATCCGGCGCTCATAA+TGG | + | chr5.3:80482427-80482446 | MS.gene75802:intron | 55.0% | |
| TGACCAGCCCAACCACATGT+AGG | - | chr5.3:80478745-80478764 | None:intergenic | 55.0% | |
| TTGCGCACGAACTTGCAGCT+TGG | + | chr5.3:80482064-80482083 | MS.gene75802:intron | 55.0% | |
| ! | AGTGTTCCTGATGGTGCACC+AGG | + | chr5.3:80481293-80481312 | MS.gene75802:CDS | 55.0% |
| ! | CGCCCCAAACCCAAAGGTTT+TGG | + | chr5.3:80477891-80477910 | MS.gene75802:CDS | 55.0% |
| ! | TCCTGATGGTGCACCAGGAA+AGG | + | chr5.3:80481298-80481317 | MS.gene75802:CDS | 55.0% |
| !! | CCATTATGAGCGCCGGATTC+AGG | - | chr5.3:80482430-80482449 | None:intergenic | 55.0% |
| !! | TACATGTGGTTGGGCTGGTC+AGG | + | chr5.3:80478744-80478763 | MS.gene75802:CDS | 55.0% |
| !! | TCAGGTGTTGGCAAGTACGC+TGG | + | chr5.3:80482498-80482517 | MS.gene75802:intron | 55.0% |
| AAGAGCTAGCACGGCGCCTT+GGG | + | chr5.3:80481928-80481947 | MS.gene75802:CDS | 60.0% | |
| ATGGGAGGGGAGGACTTTGG+GGG | - | chr5.3:80479870-80479889 | None:intergenic | 60.0% | |
| TGCAAGGGGAAGGGAGGCTT+TGG | - | chr5.3:80479929-80479948 | None:intergenic | 60.0% | |
| GAAGAGCTAGCACGGCGCCT+TGG | + | chr5.3:80481927-80481946 | MS.gene75802:CDS | 65.0% | |
| !! | CACGTGTCGGTGTCGGACAC+CGG | - | chr5.3:80481426-80481445 | None:intergenic | 65.0% |
| CACGGCGCCTTGGGCGAGAA+AGG | + | chr5.3:80481937-80481956 | MS.gene75802:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 80477836 | 80482803 | 80477836 | ID=MS.gene75802 |
| chr5.3 | mRNA | 80477836 | 80482803 | 80477836 | ID=MS.gene75802.t1;Parent=MS.gene75802 |
| chr5.3 | exon | 80477836 | 80477941 | 80477836 | ID=MS.gene75802.t1.exon1;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80477836 | 80477941 | 80477836 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80478054 | 80478187 | 80478054 | ID=MS.gene75802.t1.exon2;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80478054 | 80478187 | 80478054 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80478280 | 80478335 | 80478280 | ID=MS.gene75802.t1.exon3;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80478280 | 80478335 | 80478280 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80478714 | 80478765 | 80478714 | ID=MS.gene75802.t1.exon4;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80478714 | 80478765 | 80478714 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80478858 | 80478932 | 80478858 | ID=MS.gene75802.t1.exon5;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80478858 | 80478932 | 80478858 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80479580 | 80479660 | 80479580 | ID=MS.gene75802.t1.exon6;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80479580 | 80479660 | 80479580 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80480488 | 80480568 | 80480488 | ID=MS.gene75802.t1.exon7;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80480488 | 80480568 | 80480488 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80481055 | 80481120 | 80481055 | ID=MS.gene75802.t1.exon8;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80481055 | 80481120 | 80481055 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80481236 | 80481352 | 80481236 | ID=MS.gene75802.t1.exon9;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80481236 | 80481352 | 80481236 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80481725 | 80481772 | 80481725 | ID=MS.gene75802.t1.exon10;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80481725 | 80481772 | 80481725 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80481873 | 80481958 | 80481873 | ID=MS.gene75802.t1.exon11;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80481873 | 80481958 | 80481873 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80482502 | 80482562 | 80482502 | ID=MS.gene75802.t1.exon12;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80482502 | 80482562 | 80482502 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| chr5.3 | exon | 80482729 | 80482803 | 80482729 | ID=MS.gene75802.t1.exon13;Parent=MS.gene75802.t1 |
| chr5.3 | CDS | 80482729 | 80482803 | 80482729 | ID=cds.MS.gene75802.t1;Parent=MS.gene75802.t1 |
| Gene Sequence |
| Protein sequence |
