Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78354.t1 | XP_003597487.1 | 98.9 | 530 | 6 | 0 | 1 | 530 | 68 | 597 | 8.8e-310 | 1072 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78354.t1 | Q84RR0 | 76.9 | 503 | 116 | 0 | 2 | 504 | 59 | 561 | 1.6e-230 | 800.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78354.t1 | G7IHR6 | 98.9 | 530 | 6 | 0 | 1 | 530 | 68 | 597 | 6.3e-310 | 1072.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049404 | MS.gene78354 | 0.818501 | 1.90E-52 | -1.69E-46 |
MS.gene049824 | MS.gene78354 | 0.840194 | 1.01E-57 | -1.69E-46 |
MS.gene049825 | MS.gene78354 | 0.830675 | 2.57E-55 | -1.69E-46 |
MS.gene049863 | MS.gene78354 | 0.818753 | 1.66E-52 | -1.69E-46 |
MS.gene049873 | MS.gene78354 | 0.812299 | 4.55E-51 | -1.69E-46 |
MS.gene05016 | MS.gene78354 | 0.822505 | 2.29E-53 | -1.69E-46 |
MS.gene050559 | MS.gene78354 | 0.839723 | 1.34E-57 | -1.69E-46 |
MS.gene050561 | MS.gene78354 | 0.825161 | 5.45E-54 | -1.69E-46 |
MS.gene050562 | MS.gene78354 | 0.817265 | 3.61E-52 | -1.69E-46 |
MS.gene051279 | MS.gene78354 | 0.805845 | 1.10E-49 | -1.69E-46 |
MS.gene051365 | MS.gene78354 | 0.805919 | 1.06E-49 | -1.69E-46 |
MS.gene052030 | MS.gene78354 | 0.820133 | 8.06E-53 | -1.69E-46 |
MS.gene052239 | MS.gene78354 | -0.822519 | 2.27E-53 | -1.69E-46 |
MS.gene053597 | MS.gene78354 | 0.808664 | 2.77E-50 | -1.69E-46 |
MS.gene053599 | MS.gene78354 | 0.838288 | 3.14E-57 | -1.69E-46 |
MS.gene05364 | MS.gene78354 | 0.817531 | 3.14E-52 | -1.69E-46 |
MS.gene053678 | MS.gene78354 | 0.80135 | 9.39E-49 | -1.69E-46 |
MS.gene053995 | MS.gene78354 | 0.812066 | 5.11E-51 | -1.69E-46 |
MS.gene054651 | MS.gene78354 | 0.814311 | 1.64E-51 | -1.69E-46 |
MS.gene05548 | MS.gene78354 | 0.835952 | 1.24E-56 | -1.69E-46 |
MS.gene055512 | MS.gene78354 | 0.810746 | 9.89E-51 | -1.69E-46 |
MS.gene056366 | MS.gene78354 | 0.815306 | 9.89E-52 | -1.69E-46 |
MS.gene057060 | MS.gene78354 | 0.807512 | 4.88E-50 | -1.69E-46 |
MS.gene057705 | MS.gene78354 | 0.809054 | 2.29E-50 | -1.69E-46 |
MS.gene058008 | MS.gene78354 | 0.838499 | 2.77E-57 | -1.69E-46 |
MS.gene058009 | MS.gene78354 | 0.837655 | 4.57E-57 | -1.69E-46 |
MS.gene058625 | MS.gene78354 | 0.806386 | 8.44E-50 | -1.69E-46 |
MS.gene059317 | MS.gene78354 | 0.8172 | 3.73E-52 | -1.69E-46 |
MS.gene05978 | MS.gene78354 | 0.805864 | 1.09E-49 | -1.69E-46 |
MS.gene060587 | MS.gene78354 | 0.811679 | 6.21E-51 | -1.69E-46 |
MS.gene060935 | MS.gene78354 | 0.804838 | 1.78E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78354.t1 | MTR_2g098580 | 98.868 | 530 | 6 | 0 | 1 | 530 | 68 | 597 | 0.0 | 1105 |
MS.gene78354.t1 | MTR_4g066650 | 84.659 | 528 | 79 | 1 | 2 | 529 | 59 | 584 | 0.0 | 939 |
MS.gene78354.t1 | MTR_3g065380 | 84.557 | 531 | 69 | 4 | 1 | 527 | 53 | 574 | 0.0 | 931 |
MS.gene78354.t1 | MTR_3g065410 | 83.523 | 528 | 60 | 5 | 1 | 527 | 51 | 552 | 0.0 | 899 |
MS.gene78354.t1 | MTR_5g097670 | 90.032 | 311 | 31 | 0 | 166 | 476 | 4 | 314 | 0.0 | 593 |
MS.gene78354.t1 | MTR_4g075010 | 41.015 | 473 | 210 | 9 | 2 | 459 | 4 | 422 | 4.47e-117 | 357 |
MS.gene78354.t1 | MTR_4g075030 | 40.793 | 353 | 169 | 9 | 2 | 341 | 32 | 357 | 4.54e-77 | 248 |
MS.gene78354.t1 | MTR_4g068940 | 29.124 | 491 | 308 | 12 | 4 | 472 | 48 | 520 | 1.60e-60 | 210 |
MS.gene78354.t1 | MTR_4g068940 | 29.124 | 491 | 308 | 12 | 4 | 472 | 48 | 520 | 1.65e-60 | 209 |
MS.gene78354.t1 | MTR_3g462590 | 24.891 | 229 | 161 | 7 | 50 | 272 | 67 | 290 | 6.04e-16 | 79.0 |
MS.gene78354.t1 | MTR_4g096720 | 51.515 | 66 | 29 | 1 | 186 | 248 | 58 | 123 | 8.43e-16 | 75.5 |
MS.gene78354.t1 | MTR_3g462570 | 25.877 | 228 | 148 | 9 | 67 | 286 | 33 | 247 | 2.55e-14 | 76.3 |
MS.gene78354.t1 | MTR_5g078410 | 26.667 | 225 | 136 | 6 | 56 | 272 | 127 | 330 | 5.71e-14 | 73.6 |
MS.gene78354.t1 | MTR_2g044420 | 26.829 | 205 | 140 | 7 | 58 | 256 | 65 | 265 | 4.26e-13 | 70.1 |
MS.gene78354.t1 | MTR_2g044290 | 25.616 | 203 | 143 | 5 | 59 | 256 | 59 | 258 | 4.88e-13 | 69.7 |
MS.gene78354.t1 | MTR_2g044440 | 25.714 | 210 | 147 | 6 | 52 | 256 | 69 | 274 | 6.87e-13 | 69.7 |
MS.gene78354.t1 | MTR_1g105460 | 28.708 | 209 | 131 | 8 | 75 | 276 | 105 | 302 | 1.75e-12 | 68.9 |
MS.gene78354.t1 | MTR_8g022900 | 28.505 | 214 | 124 | 13 | 80 | 275 | 63 | 265 | 4.71e-12 | 67.0 |
MS.gene78354.t1 | MTR_3g463280 | 25.472 | 212 | 139 | 5 | 67 | 262 | 12 | 220 | 7.31e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78354.t1 | AT2G31510 | 75.992 | 504 | 119 | 2 | 2 | 504 | 59 | 561 | 0.0 | 802 |
MS.gene78354.t1 | AT1G65430 | 71.402 | 528 | 141 | 2 | 2 | 529 | 50 | 567 | 0.0 | 798 |
MS.gene78354.t1 | AT2G31510 | 76.687 | 489 | 112 | 2 | 17 | 504 | 2 | 489 | 0.0 | 783 |
MS.gene78354.t1 | AT1G05890 | 75.158 | 475 | 115 | 2 | 2 | 476 | 96 | 567 | 0.0 | 773 |
MS.gene78354.t1 | AT1G05890 | 75.158 | 475 | 115 | 2 | 2 | 476 | 54 | 525 | 0.0 | 773 |
MS.gene78354.t1 | AT2G31510 | 77.727 | 440 | 98 | 0 | 2 | 441 | 59 | 498 | 0.0 | 748 |
MS.gene78354.t1 | AT2G31770 | 57.320 | 485 | 180 | 8 | 2 | 475 | 42 | 510 | 0.0 | 579 |
MS.gene78354.t1 | AT2G31760 | 57.883 | 463 | 176 | 6 | 2 | 462 | 42 | 487 | 0.0 | 570 |
MS.gene78354.t1 | AT2G31780 | 56.962 | 395 | 155 | 5 | 2 | 394 | 60 | 441 | 7.09e-171 | 490 |
MS.gene78354.t1 | AT1G05880 | 40.377 | 478 | 251 | 9 | 2 | 469 | 37 | 490 | 1.25e-108 | 333 |
MS.gene78354.t1 | AT1G05880 | 40.377 | 478 | 244 | 11 | 2 | 469 | 37 | 483 | 1.54e-104 | 322 |
MS.gene78354.t1 | AT1G05880 | 39.387 | 457 | 243 | 9 | 2 | 448 | 37 | 469 | 2.31e-98 | 306 |
MS.gene78354.t1 | AT3G27710 | 31.723 | 476 | 283 | 15 | 5 | 459 | 45 | 499 | 1.17e-66 | 225 |
MS.gene78354.t1 | AT4G34370 | 32.311 | 489 | 271 | 19 | 2 | 459 | 40 | 499 | 3.08e-66 | 225 |
MS.gene78354.t1 | AT2G16090 | 30.309 | 485 | 282 | 14 | 4 | 459 | 43 | 500 | 1.04e-60 | 209 |
MS.gene78354.t1 | AT2G16090 | 30.309 | 485 | 282 | 14 | 4 | 459 | 43 | 500 | 1.65e-60 | 209 |
MS.gene78354.t1 | AT2G16090 | 30.309 | 485 | 282 | 14 | 4 | 459 | 43 | 500 | 1.70e-60 | 210 |
MS.gene78354.t1 | AT2G16090 | 30.172 | 464 | 269 | 13 | 25 | 459 | 3 | 440 | 1.47e-58 | 202 |
MS.gene78354.t1 | AT2G16090 | 30.172 | 464 | 269 | 13 | 25 | 459 | 3 | 440 | 2.39e-58 | 202 |
MS.gene78354.t1 | AT5G63750 | 27.160 | 567 | 320 | 18 | 3 | 528 | 9 | 523 | 5.50e-58 | 202 |
MS.gene78354.t1 | AT5G08730 | 25.283 | 530 | 329 | 12 | 3 | 525 | 8 | 477 | 3.03e-54 | 191 |
MS.gene78354.t1 | AT4G34370 | 35.112 | 356 | 177 | 15 | 130 | 459 | 5 | 332 | 1.45e-50 | 179 |
MS.gene78354.t1 | AT5G63730 | 26.580 | 538 | 320 | 16 | 3 | 525 | 9 | 486 | 3.45e-48 | 174 |
MS.gene78354.t1 | AT3G27720 | 33.533 | 334 | 189 | 11 | 142 | 459 | 143 | 459 | 1.51e-45 | 167 |
MS.gene78354.t1 | AT5G63760 | 26.707 | 498 | 277 | 16 | 56 | 525 | 2 | 439 | 4.05e-45 | 165 |
MS.gene78354.t1 | AT5G63760 | 26.707 | 498 | 277 | 16 | 56 | 525 | 2 | 439 | 4.05e-45 | 165 |
MS.gene78354.t1 | AT5G63760 | 26.707 | 498 | 277 | 16 | 56 | 525 | 2 | 439 | 4.05e-45 | 165 |
MS.gene78354.t1 | AT5G63760 | 27.877 | 391 | 207 | 13 | 151 | 525 | 2 | 333 | 1.58e-36 | 139 |
MS.gene78354.t1 | AT5G37560 | 25.000 | 252 | 160 | 10 | 58 | 298 | 163 | 396 | 4.46e-12 | 68.6 |
MS.gene78354.t1 | AT1G32340 | 25.359 | 209 | 130 | 6 | 80 | 268 | 378 | 580 | 7.69e-12 | 68.6 |
Find 106 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGGTCAATCCAGCTAGTT+TGG | 0.283940 | 2.3:+4778318 | None:intergenic |
GATATCTGATTCTTTCAATA+TGG | 0.302344 | 2.3:+4783364 | None:intergenic |
TATAACCGAGGCTTGGTTAC+AGG | 0.307193 | 2.3:-4779336 | MS.gene78354:intron |
CTTCAATGTAAGATCTAATA+AGG | 0.312321 | 2.3:+4782534 | None:intergenic |
GCATCAGGATTCTCATAAAC+TGG | 0.342613 | 2.3:+4783027 | None:intergenic |
TTACATTGAAGACAATAAAA+AGG | 0.360499 | 2.3:-4782522 | MS.gene78354:intron |
TATCATCTTCCTGCCGTTCC+CGG | 0.363856 | 2.3:+4783342 | None:intergenic |
TCTTCAGGTGAGGCAGAATC+AGG | 0.366980 | 2.3:-4778430 | MS.gene78354:intron |
TTCAATCGGTCTCTTGCACT+TGG | 0.376001 | 2.3:+4780681 | None:intergenic |
TGTCTTACCTCTTTAGCATC+AGG | 0.407328 | 2.3:+4783012 | None:intergenic |
CCGAAGAAAAGTTGGCTTGT+TGG | 0.412456 | 2.3:-4783055 | MS.gene78354:CDS |
CACTTCAATTAACGATGGTC+CGG | 0.414083 | 2.3:-4782663 | MS.gene78354:CDS |
TCCTACTTCGTCATTACAAT+TGG | 0.415038 | 2.3:-4783271 | MS.gene78354:intron |
ACTTCTTCGAGAATTTGGTT+AGG | 0.415280 | 2.3:-4777829 | MS.gene78354:CDS |
CTTCTTCGAGAATTTGGTTA+GGG | 0.433695 | 2.3:-4777828 | MS.gene78354:CDS |
TATTGAAAGAATCAGATATC+CGG | 0.435334 | 2.3:-4783361 | MS.gene78354:CDS |
AGTAGGATGCTTGCAGCAAC+TGG | 0.437632 | 2.3:+4783287 | None:intergenic |
AGAAATGGCAAAGAATTCAT+TGG | 0.440218 | 2.3:-4780111 | MS.gene78354:CDS |
GCAGCACCACAAGCGGGATC+AGG | 0.445228 | 2.3:+4782620 | None:intergenic |
ATCAGATATCCGGGAACGGC+AGG | 0.449175 | 2.3:-4783351 | MS.gene78354:CDS |
ACCAAGTGGTGTCCTGCTCC+TGG | 0.450476 | 2.3:-4782122 | MS.gene78354:CDS |
TTACATGAACAGTTTGCATC+TGG | 0.456596 | 2.3:+4779858 | None:intergenic |
CTTCAGCACCGAGGAATACT+TGG | 0.457538 | 2.3:+4778371 | None:intergenic |
TTGGTTAGGGCATTAGAGAA+TGG | 0.467324 | 2.3:-4777815 | MS.gene78354:CDS |
GAAGCACTGTGAATCTTAGA+AGG | 0.475586 | 2.3:+4782844 | None:intergenic |
GACACTGTGCCACAATCCAC+TGG | 0.478077 | 2.3:+4781905 | None:intergenic |
GCTTCATCAATGTGCCGAAA+AGG | 0.481489 | 2.3:-4778398 | MS.gene78354:CDS |
TCAATCGGTCTCTTGCACTT+GGG | 0.483764 | 2.3:+4780682 | None:intergenic |
CGCTGCAGATAGTTGAGTGC+AGG | 0.485020 | 2.3:-4778632 | MS.gene78354:intron |
AGGTGAGGCAGAATCAGGTT+TGG | 0.487080 | 2.3:-4778425 | MS.gene78354:CDS |
CAGAATCCGAAAACATGAAC+TGG | 0.489228 | 2.3:-4781859 | MS.gene78354:intron |
TGAGAATCCTGATGCTAAAG+AGG | 0.493553 | 2.3:-4783019 | MS.gene78354:intron |
ATTATCATCAGTTAATCTGC+TGG | 0.496995 | 2.3:+4777676 | None:intergenic |
GCTTGCAGCAACTGGTGGTA+TGG | 0.503549 | 2.3:+4783295 | None:intergenic |
ATGTCATATGCATGCACCCT+TGG | 0.503759 | 2.3:+4780653 | None:intergenic |
ATAAACTTAAGTTGTGACTC+AGG | 0.504131 | 2.3:+4779356 | None:intergenic |
TTGAAGTGGACATATGCATA+TGG | 0.505690 | 2.3:-4778603 | MS.gene78354:CDS |
AATCGTTGAATTCTTTAGAC+GGG | 0.510360 | 2.3:+4778347 | None:intergenic |
TATCTACGCAGGCTATGCCT+TGG | 0.512144 | 2.3:-4780355 | MS.gene78354:intron |
TCAGTAATGTTAATGACGCT+TGG | 0.515158 | 2.3:-4783098 | MS.gene78354:CDS |
GATAGAGTCCGAAGAAAAGT+TGG | 0.518754 | 2.3:-4783063 | MS.gene78354:CDS |
CAATCTAAAGTGCACTGAAG+AGG | 0.528587 | 2.3:-4781936 | MS.gene78354:intron |
CAAGTATTCCTCGGTGCTGA+AGG | 0.531402 | 2.3:-4778370 | MS.gene78354:CDS |
CAGTTCTTTGAGTACTTGCA+AGG | 0.531756 | 2.3:-4778546 | MS.gene78354:intron |
TGCAGATAGTTGAGTGCAGG+CGG | 0.532130 | 2.3:-4778629 | MS.gene78354:intron |
TTAAGTTTATAACCGAGGCT+TGG | 0.534315 | 2.3:-4779343 | MS.gene78354:CDS |
GCAGGCTATGCCTTGGTGCA+TGG | 0.535322 | 2.3:-4780348 | MS.gene78354:intron |
ATTGAAAGAATCAGATATCC+GGG | 0.541380 | 2.3:-4783360 | MS.gene78354:CDS |
ATCAACAGCAGCACCACAAG+CGG | 0.544045 | 2.3:+4782613 | None:intergenic |
AAATGCGGCAGGGAGCAGTA+AGG | 0.553045 | 2.3:-4777738 | MS.gene78354:CDS |
ACTTAAGTTGTGACTCAGGT+TGG | 0.556969 | 2.3:+4779360 | None:intergenic |
ACCAATTGTAATGACGAAGT+AGG | 0.562400 | 2.3:+4783270 | None:intergenic |
CAGCAAAATTCAAATTTGCA+AGG | 0.564267 | 2.3:+4780622 | None:intergenic |
CATGGTCAGACCATGGTGAA+AGG | 0.567864 | 2.3:-4780330 | MS.gene78354:CDS |
GCATGTTCACAACCAGGAGC+AGG | 0.569609 | 2.3:+4782110 | None:intergenic |
ACTTCAATTAACGATGGTCC+GGG | 0.571072 | 2.3:-4782662 | MS.gene78354:CDS |
ACCAGGAGCAGGACACCACT+TGG | 0.572721 | 2.3:+4782121 | None:intergenic |
CCAAACTAGCTGGATTGACC+AGG | 0.573269 | 2.3:-4778318 | MS.gene78354:intron |
AAATCGTTGAATTCTTTAGA+CGG | 0.581686 | 2.3:+4778346 | None:intergenic |
CATCTTAGCATCAAGCATCC+CGG | 0.583374 | 2.3:+4782644 | None:intergenic |
ACACACATTATTATGAGCGG+TGG | 0.585129 | 2.3:-4780082 | MS.gene78354:CDS |
AGAGAATGGTTTATGTGATG+TGG | 0.585426 | 2.3:-4777801 | MS.gene78354:CDS |
AGCAAAAGCTATATGAACAA+AGG | 0.586347 | 2.3:+4782045 | None:intergenic |
GGTCTCTTGCACTTGGGACA+CGG | 0.587340 | 2.3:+4780688 | None:intergenic |
ACTCGTTGCTTTGCTTGTAG+CGG | 0.587856 | 2.3:+4777766 | None:intergenic |
AGATGTCCTGATCCCGCTTG+TGG | 0.591881 | 2.3:-4782626 | MS.gene78354:CDS |
AGTGCAGGCGGGTATTGAAG+TGG | 0.592470 | 2.3:-4778617 | MS.gene78354:CDS |
TGTAAGATCTAATAAGGTAA+CGG | 0.593468 | 2.3:+4782540 | None:intergenic |
GCTCACCGTCCAGTGGATTG+TGG | 0.593545 | 2.3:-4781914 | MS.gene78354:CDS |
TCAGACCATGGTGAAAGGAC+TGG | 0.594334 | 2.3:-4780325 | MS.gene78354:CDS |
AATGCGGCAGGGAGCAGTAA+GGG | 0.595005 | 2.3:-4777737 | MS.gene78354:CDS |
ATTTACCTGTAACCAAGCCT+CGG | 0.595509 | 2.3:+4779331 | None:intergenic |
AAGATTCACAGTGCTTCTTG+CGG | 0.597915 | 2.3:-4782838 | MS.gene78354:CDS |
ATGAAGCAGCTAAACAAGAG+GGG | 0.599723 | 2.3:-4780279 | MS.gene78354:CDS |
GCAGATAGTTGAGTGCAGGC+GGG | 0.600899 | 2.3:-4778628 | MS.gene78354:intron |
ATCAGTTAATCTGCTGGACA+CGG | 0.602307 | 2.3:+4777682 | None:intergenic |
TATGAAGCAGCTAAACAAGA+GGG | 0.604422 | 2.3:-4780280 | MS.gene78354:CDS |
AAGGAACTCCAAGTATTCCT+CGG | 0.604831 | 2.3:-4778379 | MS.gene78354:CDS |
TTATGTGATGTGGATAGTAA+TGG | 0.606906 | 2.3:-4777791 | MS.gene78354:CDS |
CAGTGTACCTATGCAAATGT+CGG | 0.609475 | 2.3:-4777638 | MS.gene78354:CDS |
ATTGCACATCGCGCATGCAG+TGG | 0.611898 | 2.3:+4777610 | None:intergenic |
TCAACAGCAGCACCACAAGC+GGG | 0.617382 | 2.3:+4782614 | None:intergenic |
CACACATTATTATGAGCGGT+GGG | 0.617387 | 2.3:-4780081 | MS.gene78354:CDS |
GTATGTGGCCAGCTTACTTG+CGG | 0.619197 | 2.3:-4782889 | MS.gene78354:intron |
ACAACTTAAGTTTATAACCG+AGG | 0.623702 | 2.3:-4779348 | MS.gene78354:CDS |
AGGCAGAATCAGGTTTGGAG+AGG | 0.624341 | 2.3:-4778420 | MS.gene78354:CDS |
TGAAGAGGCTCACCGTCCAG+TGG | 0.630686 | 2.3:-4781921 | MS.gene78354:CDS |
CAAAATTCAAATTTGCAAGG+TGG | 0.639701 | 2.3:+4780625 | None:intergenic |
GCGCGATGTGCAATCAAGAG+CGG | 0.641145 | 2.3:-4777601 | MS.gene78354:CDS |
CTGTGCCACAATCCACTGGA+CGG | 0.642823 | 2.3:+4781909 | None:intergenic |
TGGCAAAGAATTCATTGGAG+AGG | 0.643713 | 2.3:-4780106 | MS.gene78354:CDS |
TTATGAAGCAGCTAAACAAG+AGG | 0.656326 | 2.3:-4780281 | MS.gene78354:CDS |
AGGATGCTTGCAGCAACTGG+TGG | 0.656384 | 2.3:+4783290 | None:intergenic |
TGAAGCAGCTAAACAAGAGG+GGG | 0.657257 | 2.3:-4780278 | MS.gene78354:CDS |
ATTGGCACTTCAATTAACGA+TGG | 0.666421 | 2.3:-4782668 | MS.gene78354:CDS |
AAGAATCAGATATCCGGGAA+CGG | 0.666579 | 2.3:-4783355 | MS.gene78354:CDS |
GGCAGATCCGACATTTGCAT+AGG | 0.668337 | 2.3:+4777631 | None:intergenic |
GACCATGGTGAAAGGACTGG+CGG | 0.675478 | 2.3:-4780322 | MS.gene78354:CDS |
ATTGTGGCACAGTGTCGAAG+TGG | 0.679812 | 2.3:-4781898 | MS.gene78354:CDS |
GATTAACTGATGATAATGAG+TGG | 0.686673 | 2.3:-4777670 | MS.gene78354:CDS |
AACCGCCAGTCCTTTCACCA+TGG | 0.694411 | 2.3:+4780320 | None:intergenic |
CATGGTCTGACCATGCACCA+AGG | 0.699416 | 2.3:+4780338 | None:intergenic |
CTTGGTGCATGGTCAGACCA+TGG | 0.701151 | 2.3:-4780337 | MS.gene78354:CDS |
TTAACTGCATGTTCACAACC+AGG | 0.709158 | 2.3:+4782104 | None:intergenic |
GGTACACACATTATTATGAG+CGG | 0.716244 | 2.3:-4780085 | MS.gene78354:CDS |
TAGACGGGCCTTCAGCACCG+AGG | 0.721396 | 2.3:+4778362 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTATTTAAAAGAAATATAT+GGG | + | chr2.3:4779855-4779874 | None:intergenic | 10.0% |
!! | TATAAAAATAACTATGAATT+TGG | + | chr2.3:4781006-4781025 | None:intergenic | 10.0% |
!!! | AAAAACATTTGATTTTTAAT+AGG | - | chr2.3:4781760-4781779 | MS.gene78354:intron | 10.0% |
!!! | TTTTATAATTTTACTTTACT+GGG | - | chr2.3:4780070-4780089 | MS.gene78354:CDS | 10.0% |
!!! | TTTTTATAATTTTACTTTAC+TGG | - | chr2.3:4780069-4780088 | MS.gene78354:CDS | 10.0% |
!! | ACTTTATAATTATGTACTAA+TGG | - | chr2.3:4777822-4777841 | MS.gene78354:CDS | 15.0% |
!! | AGTATTAGATTAATAAATGA+AGG | - | chr2.3:4781819-4781838 | MS.gene78354:intron | 15.0% |
!! | ATATAGTTATAAAAATGTCT+CGG | + | chr2.3:4780784-4780803 | None:intergenic | 15.0% |
!! | CACTATTTAAAAGAAATATA+TGG | + | chr2.3:4779856-4779875 | None:intergenic | 15.0% |
!! | TAATCATTGTTTAAATTACA+CGG | + | chr2.3:4781927-4781946 | None:intergenic | 15.0% |
!! | TTACTATATCTAATTTAAAC+AGG | + | chr2.3:4782816-4782835 | None:intergenic | 15.0% |
!!! | CTTTTGATTATTTTATTGTT+AGG | - | chr2.3:4781470-4781489 | MS.gene78354:intron | 15.0% |
!!! | TATTTCTTTTAAATAGTGAA+AGG | - | chr2.3:4779858-4779877 | MS.gene78354:intron | 15.0% |
!! | AAAACTTTACATAACATACA+AGG | + | chr2.3:4777787-4777806 | None:intergenic | 20.0% |
!! | AAATTCATATTGCTTTAATG+TGG | + | chr2.3:4781856-4781875 | None:intergenic | 20.0% |
!! | AACAAAATTATATTAGGGAA+GGG | + | chr2.3:4780433-4780452 | None:intergenic | 20.0% |
!! | AATTCATATTGCTTTAATGT+GGG | + | chr2.3:4781855-4781874 | None:intergenic | 20.0% |
!! | AGTACATAATTATAAAGTGA+AGG | + | chr2.3:4777820-4777839 | None:intergenic | 20.0% |
!! | ATCTGCCAATAAAAAAAAAA+AGG | + | chr2.3:4781565-4781584 | None:intergenic | 20.0% |
!! | ATGACTAAAATAAATCGTTA+TGG | + | chr2.3:4778707-4778726 | None:intergenic | 20.0% |
!! | CAAGACATTTCTAATTAAAT+TGG | + | chr2.3:4782474-4782493 | None:intergenic | 20.0% |
!! | CTGATAAATAAACTAATGAT+AGG | + | chr2.3:4779598-4779617 | None:intergenic | 20.0% |
!! | GTACATAATTATAAAGTGAA+GGG | + | chr2.3:4777819-4777838 | None:intergenic | 20.0% |
!! | TAATATGATATCACTAATGA+TGG | - | chr2.3:4783060-4783079 | MS.gene78354:CDS | 20.0% |
!! | TATAGTTATAAAAATGTCTC+GGG | + | chr2.3:4780783-4780802 | None:intergenic | 20.0% |
!! | TTACAGGTAAATGAATATAT+TGG | - | chr2.3:4781649-4781668 | MS.gene78354:intron | 20.0% |
!! | TTACATTGAAGACAATAAAA+AGG | - | chr2.3:4778447-4778466 | MS.gene78354:intron | 20.0% |
!! | TTACCATATATTATCTTTGT+TGG | - | chr2.3:4782985-4783004 | MS.gene78354:intron | 20.0% |
!! | TTATTTATCAGTATTCATGA+TGG | - | chr2.3:4779607-4779626 | MS.gene78354:intron | 20.0% |
!!! | ACAATTAAAAAATTAGCTTC+CGG | - | chr2.3:4782107-4782126 | MS.gene78354:CDS | 20.0% |
!!! | ATTTGTTTGGGTTTTAAAAT+AGG | - | chr2.3:4777981-4778000 | MS.gene78354:intron | 20.0% |
!!! | TGTATGTATTCATGTATTTT+TGG | - | chr2.3:4779262-4779281 | MS.gene78354:intron | 20.0% |
!!! | TTTTGCTTATATACCATTTT+TGG | - | chr2.3:4782719-4782738 | MS.gene78354:intron | 20.0% |
!!! | TTTTTTTTTTTATTGGCAGA+TGG | - | chr2.3:4781564-4781583 | MS.gene78354:intron | 20.0% |
! | AAACCAATGTTAAATTTGTC+TGG | - | chr2.3:4779784-4779803 | MS.gene78354:intron | 25.0% |
! | AAATCGTTGAATTCTTTAGA+CGG | + | chr2.3:4782626-4782645 | None:intergenic | 25.0% |
! | AACTGAAAAAAGAAGAGAAA+TGG | - | chr2.3:4780843-4780862 | MS.gene78354:intron | 25.0% |
! | AATTGAGTAGTTTATTTGCA+AGG | + | chr2.3:4782512-4782531 | None:intergenic | 25.0% |
! | ACAAAATTATATTAGGGAAG+GGG | + | chr2.3:4780432-4780451 | None:intergenic | 25.0% |
! | ACACCAACAAAGATAATATA+TGG | + | chr2.3:4782991-4783010 | None:intergenic | 25.0% |
! | ACCCTCAACAAAATTATATT+AGG | + | chr2.3:4780439-4780458 | None:intergenic | 25.0% |
! | AGAAGAAATAAGATCGTTAT+GGG | + | chr2.3:4778807-4778826 | None:intergenic | 25.0% |
! | ATATATCCTGGCATATAAAA+AGG | + | chr2.3:4778283-4778302 | None:intergenic | 25.0% |
! | ATATATTATCTTTGTTGGTG+TGG | - | chr2.3:4782990-4783009 | MS.gene78354:intron | 25.0% |
! | ATATTTCACTAGAATTCCTA+TGG | - | chr2.3:4781023-4781042 | MS.gene78354:intron | 25.0% |
! | ATTAATTTAACAGTTAGCTC+AGG | + | chr2.3:4780232-4780251 | None:intergenic | 25.0% |
! | ATTATGTACTAATGGAGATA+TGG | - | chr2.3:4777830-4777849 | MS.gene78354:CDS | 25.0% |
! | ATTGAGTAGTTTATTTGCAA+GGG | + | chr2.3:4782511-4782530 | None:intergenic | 25.0% |
! | CAACAAAATTATATTAGGGA+AGG | + | chr2.3:4780434-4780453 | None:intergenic | 25.0% |
! | CATAATAATTCTTTGCATGT+TGG | - | chr2.3:4778583-4778602 | MS.gene78354:CDS | 25.0% |
! | CCCTCAACAAAATTATATTA+GGG | + | chr2.3:4780438-4780457 | None:intergenic | 25.0% |
! | CTAAAATAAATCGTTATGGT+TGG | + | chr2.3:4778703-4778722 | None:intergenic | 25.0% |
! | CTTCAATGTAAGATCTAATA+AGG | + | chr2.3:4778438-4778457 | None:intergenic | 25.0% |
! | GATATCTGATTCTTTCAATA+TGG | + | chr2.3:4777608-4777627 | None:intergenic | 25.0% |
! | GTTAGATGTTTGATTAAGAA+AGG | - | chr2.3:4779705-4779724 | MS.gene78354:intron | 25.0% |
! | GTTATACAATCACATAGAAT+TGG | - | chr2.3:4781317-4781336 | MS.gene78354:intron | 25.0% |
! | TAAAAACTTCTTCGAGAATT+TGG | - | chr2.3:4783135-4783154 | MS.gene78354:intron | 25.0% |
! | TAAATCAAACCATACCATTT+GGG | + | chr2.3:4783088-4783107 | None:intergenic | 25.0% |
! | TACGCAAAATGTTTAATCTT+AGG | + | chr2.3:4782005-4782024 | None:intergenic | 25.0% |
! | TATTGAAAGAATCAGATATC+CGG | - | chr2.3:4777608-4777627 | MS.gene78354:CDS | 25.0% |
! | TGAGCTAACTGTTAAATTAA+TGG | - | chr2.3:4780231-4780250 | MS.gene78354:intron | 25.0% |
! | TGTAAGATCTAATAAGGTAA+CGG | + | chr2.3:4778432-4778451 | None:intergenic | 25.0% |
! | TTAACTCAGCGAAATAAAAA+TGG | + | chr2.3:4778050-4778069 | None:intergenic | 25.0% |
! | TTAATTTAACAGTTAGCTCA+GGG | + | chr2.3:4780231-4780250 | None:intergenic | 25.0% |
!! | ACTCAATTTTTCTTATCTTC+AGG | - | chr2.3:4782524-4782543 | MS.gene78354:CDS | 25.0% |
!! | ATTTTTACAACTTTGACCAA+AGG | + | chr2.3:4781680-4781699 | None:intergenic | 25.0% |
!! | CAACACAAAACATAGAATTT+TGG | + | chr2.3:4781182-4781201 | None:intergenic | 25.0% |
!! | CAATTAAAAAATTAGCTTCC+GGG | - | chr2.3:4782108-4782127 | MS.gene78354:CDS | 25.0% |
!! | CCCTAATATAATTTTGTTGA+GGG | - | chr2.3:4780435-4780454 | MS.gene78354:intron | 25.0% |
!! | GAATATATTGGTTATACCTT+TGG | - | chr2.3:4781661-4781680 | MS.gene78354:intron | 25.0% |
!! | TCCCTAATATAATTTTGTTG+AGG | - | chr2.3:4780434-4780453 | MS.gene78354:intron | 25.0% |
!! | TTTAATAGTTTGACTCGAAA+TGG | - | chr2.3:4779943-4779962 | MS.gene78354:intron | 25.0% |
!! | TTTTATATGCCAGGATATAT+TGG | - | chr2.3:4778283-4778302 | MS.gene78354:intron | 25.0% |
!! | TTTTATGCTTGTAGAACTTT+GGG | - | chr2.3:4779166-4779185 | MS.gene78354:intron | 25.0% |
!! | TTTTTATGCTTGTAGAACTT+TGG | - | chr2.3:4779165-4779184 | MS.gene78354:intron | 25.0% |
!!! | AAATTTAACATTGGTTTCTC+AGG | + | chr2.3:4779781-4779800 | None:intergenic | 25.0% |
!!! | ACATGCTATGTTATTTTATG+TGG | - | chr2.3:4777743-4777762 | MS.gene78354:CDS | 25.0% |
!!! | CATGCTATGTTATTTTATGT+GGG | - | chr2.3:4777744-4777763 | MS.gene78354:CDS | 25.0% |
!!! | CTTATATACCATTTTTGGTT+GGG | - | chr2.3:4782724-4782743 | MS.gene78354:intron | 25.0% |
!!! | GGTGTCCTTTTTTTTTTTAT+TGG | - | chr2.3:4781557-4781576 | MS.gene78354:intron | 25.0% |
!!! | TGTTAAATTAATGGACTTTC+AGG | - | chr2.3:4780240-4780259 | MS.gene78354:intron | 25.0% |
!!! | TTTCTATGACTAGTTTTAAG+TGG | - | chr2.3:4779217-4779236 | MS.gene78354:intron | 25.0% |
AAAATGTTTAATCTTAGGCC+AGG | + | chr2.3:4782000-4782019 | None:intergenic | 30.0% | |
AATAATTCTTTGCATGTTGG+TGG | - | chr2.3:4778586-4778605 | MS.gene78354:CDS | 30.0% | |
AATCACATAGAATTGGATCT+GGG | - | chr2.3:4781324-4781343 | MS.gene78354:intron | 30.0% | |
AATCGTTGAATTCTTTAGAC+GGG | + | chr2.3:4782625-4782644 | None:intergenic | 30.0% | |
AATGTAAGTTGCATTTGGAT+TGG | - | chr2.3:4778949-4778968 | MS.gene78354:intron | 30.0% | |
ACAACTTAAGTTTATAACCG+AGG | - | chr2.3:4781621-4781640 | MS.gene78354:intron | 30.0% | |
ACAGAAAGGGAAAAAAAGTA+TGG | + | chr2.3:4780942-4780961 | None:intergenic | 30.0% | |
ACAGAAGATACTAAACAGAA+AGG | + | chr2.3:4780956-4780975 | None:intergenic | 30.0% | |
AGAAAGTTAGAGTAACCAAT+TGG | - | chr2.3:4779422-4779441 | MS.gene78354:intron | 30.0% | |
AGAAATGGCAAAGAATTCAT+TGG | - | chr2.3:4780858-4780877 | MS.gene78354:intron | 30.0% | |
AGAGGTAAGACATATTTGTT+TGG | - | chr2.3:4777968-4777987 | MS.gene78354:intron | 30.0% | |
AGCAAAAGCTATATGAACAA+AGG | + | chr2.3:4778927-4778946 | None:intergenic | 30.0% | |
AGTAAGTAAGAACATTTACC+TGG | + | chr2.3:4782672-4782691 | None:intergenic | 30.0% | |
ATAATTCTTTGCATGTTGGT+GGG | - | chr2.3:4778587-4778606 | MS.gene78354:CDS | 30.0% | |
ATGATATGACTAAGAATGAC+AGG | - | chr2.3:4779392-4779411 | MS.gene78354:intron | 30.0% | |
ATTATCATCAGTTAATCTGC+TGG | + | chr2.3:4783296-4783315 | None:intergenic | 30.0% | |
ATTGAAAGAATCAGATATCC+GGG | - | chr2.3:4777609-4777628 | MS.gene78354:CDS | 30.0% | |
CAAAATTCAAATTTGCAAGG+TGG | + | chr2.3:4780347-4780366 | None:intergenic | 30.0% | |
CAGAAGAAATAAGATCGTTA+TGG | + | chr2.3:4778808-4778827 | None:intergenic | 30.0% | |
CAGAAGATACTAAACAGAAA+GGG | + | chr2.3:4780955-4780974 | None:intergenic | 30.0% | |
CAGCAAAATTCAAATTTGCA+AGG | + | chr2.3:4780350-4780369 | None:intergenic | 30.0% | |
CATTCTTTCAAATGAAGTGA+GGG | + | chr2.3:4779994-4780013 | None:intergenic | 30.0% | |
CATTGTTTAAATTACACGGA+TGG | + | chr2.3:4781923-4781942 | None:intergenic | 30.0% | |
GAAAGTTAGAGTAACCAATT+GGG | - | chr2.3:4779423-4779442 | MS.gene78354:intron | 30.0% | |
GAGGTAAGACATATTTGTTT+GGG | - | chr2.3:4777969-4777988 | MS.gene78354:intron | 30.0% | |
GATCTTAATCTGTGTTCTTA+TGG | - | chr2.3:4781536-4781555 | MS.gene78354:intron | 30.0% | |
GATTAAGAAAGGATATTGCA+CGG | - | chr2.3:4779716-4779735 | MS.gene78354:intron | 30.0% | |
GTAAATCAAACCATACCATT+TGG | + | chr2.3:4783089-4783108 | None:intergenic | 30.0% | |
GTTCCAGACAAATTTAACAT+TGG | + | chr2.3:4779790-4779809 | None:intergenic | 30.0% | |
TAAACTAATGATAGGCCATT+CGG | + | chr2.3:4779590-4779609 | None:intergenic | 30.0% | |
TCATATCATGTCTTCTATGA+TGG | + | chr2.3:4779381-4779400 | None:intergenic | 30.0% | |
TCATTCTTTCAAATGAAGTG+AGG | + | chr2.3:4779995-4780014 | None:intergenic | 30.0% | |
TGGTAAATCATCATCTTTCT+GGG | - | chr2.3:4777718-4777737 | MS.gene78354:CDS | 30.0% | |
TTAGAAATGTCTTGCATTTG+TGG | - | chr2.3:4782480-4782499 | MS.gene78354:intron | 30.0% | |
TTATGTGATGTGGATAGTAA+TGG | - | chr2.3:4783178-4783197 | MS.gene78354:intron | 30.0% | |
TTGGTAAATCATCATCTTTC+TGG | - | chr2.3:4777717-4777736 | MS.gene78354:CDS | 30.0% | |
! | AAACCAAAGTTTTTGCCATT+AGG | + | chr2.3:4779679-4779698 | None:intergenic | 30.0% |
! | ACTAAACTGTCTAAAATAGC+TGG | - | chr2.3:4781365-4781384 | MS.gene78354:intron | 30.0% |
! | ATAAACTTAAGTTGTGACTC+AGG | + | chr2.3:4781616-4781635 | None:intergenic | 30.0% |
! | ATTTTTCTTATCTTCAGGTG+AGG | - | chr2.3:4782529-4782548 | MS.gene78354:CDS | 30.0% |
! | CTTGCAAATTTGAATTTTGC+TGG | - | chr2.3:4780348-4780367 | MS.gene78354:intron | 30.0% |
! | GATTAACTGATGATAATGAG+TGG | - | chr2.3:4783299-4783318 | MS.gene78354:CDS | 30.0% |
! | TTTGTTCATATAGCTTTTGC+TGG | - | chr2.3:4778926-4778945 | MS.gene78354:intron | 30.0% |
!!! | AAATGCAGTTTTGTTGTAGT+TGG | - | chr2.3:4779332-4779351 | MS.gene78354:intron | 30.0% |
!!! | GCTTATATACCATTTTTGGT+TGG | - | chr2.3:4782723-4782742 | MS.gene78354:intron | 30.0% |
!!! | TTAGTCATTGCTATTTTGCA+TGG | - | chr2.3:4778719-4778738 | MS.gene78354:intron | 30.0% |
!!! | TTATTTTTGCAACCTTGTCA+TGG | - | chr2.3:4780524-4780543 | MS.gene78354:intron | 30.0% |
!!! | TTTGTTTTGTTTAGACCAAG+TGG | - | chr2.3:4778833-4778852 | MS.gene78354:intron | 30.0% |
AAAATAGCTGGACTAAGTCT+TGG | - | chr2.3:4781377-4781396 | MS.gene78354:intron | 35.0% | |
AAATCACTGTTTGATGAGCT+TGG | - | chr2.3:4782141-4782160 | MS.gene78354:intron | 35.0% | |
AAATTACACGGATGGAAACA+AGG | + | chr2.3:4781915-4781934 | None:intergenic | 35.0% | |
AAATTATATTAGGGAAGGGG+AGG | + | chr2.3:4780429-4780448 | None:intergenic | 35.0% | |
AACAGAGAATCGTTAAGGAT+TGG | - | chr2.3:4779906-4779925 | MS.gene78354:intron | 35.0% | |
AAGCAGTTCACTGAGTATTA+AGG | + | chr2.3:4780108-4780127 | None:intergenic | 35.0% | |
AAGTACTCCAAAACATGAGA+AGG | + | chr2.3:4782967-4782986 | None:intergenic | 35.0% | |
ACCAATTGTAATGACGAAGT+AGG | + | chr2.3:4777702-4777721 | None:intergenic | 35.0% | |
ACTACTCAACAGTCTAACAA+GGG | + | chr2.3:4782185-4782204 | None:intergenic | 35.0% | |
ACTAGAATTCCTATGGTGTA+AGG | - | chr2.3:4781030-4781049 | MS.gene78354:intron | 35.0% | |
ACTCAAACAGAGAATCGTTA+AGG | - | chr2.3:4779901-4779920 | MS.gene78354:intron | 35.0% | |
ACTTCTTCGAGAATTTGGTT+AGG | - | chr2.3:4783140-4783159 | MS.gene78354:intron | 35.0% | |
AGACCGATTGAAAAAAACCA+AGG | - | chr2.3:4780299-4780318 | MS.gene78354:CDS | 35.0% | |
AGAGAATGGTTTATGTGATG+TGG | - | chr2.3:4783168-4783187 | MS.gene78354:intron | 35.0% | |
AGATACTCAAGACTTGAGTT+GGG | - | chr2.3:4780204-4780223 | MS.gene78354:intron | 35.0% | |
AGCAACGAGTTCAAAAAATG+CGG | - | chr2.3:4783216-4783235 | MS.gene78354:intron | 35.0% | |
AGCATGAAAAACAGTATGGA+TGG | + | chr2.3:4778157-4778176 | None:intergenic | 35.0% | |
AGTCACACTGCAAAAACAAA+TGG | + | chr2.3:4783116-4783135 | None:intergenic | 35.0% | |
ATAAAAATGTCTCGGGAATG+TGG | + | chr2.3:4780776-4780795 | None:intergenic | 35.0% | |
ATACAGGAGGGTAAATCATA+TGG | - | chr2.3:4779464-4779483 | MS.gene78354:intron | 35.0% | |
ATACATACAAAAAGCCACGA+CGG | + | chr2.3:4779251-4779270 | None:intergenic | 35.0% | |
ATATGATTTACCCTCCTGTA+TGG | + | chr2.3:4779465-4779484 | None:intergenic | 35.0% | |
ATGGATCAATAGTCACCATA+AGG | + | chr2.3:4779635-4779654 | None:intergenic | 35.0% | |
ATTGGCACTTCAATTAACGA+TGG | - | chr2.3:4778301-4778320 | MS.gene78354:intron | 35.0% | |
ATTTGCCCTAATTTATCACC+TGG | - | chr2.3:4778615-4778634 | MS.gene78354:CDS | 35.0% | |
CAATCACATAGAATTGGATC+TGG | - | chr2.3:4781323-4781342 | MS.gene78354:intron | 35.0% | |
CAATTCCCTAACCATGTTTA+GGG | + | chr2.3:4779742-4779761 | None:intergenic | 35.0% | |
CACTGTAGTAGTGTATGTAA+TGG | + | chr2.3:4780178-4780197 | None:intergenic | 35.0% | |
CGTGCAATGATGCAAATTAT+GGG | - | chr2.3:4780468-4780487 | MS.gene78354:intron | 35.0% | |
CTTCTTCGAGAATTTGGTTA+GGG | - | chr2.3:4783141-4783160 | MS.gene78354:intron | 35.0% | |
GAAGTAAGTATAAGACACAG+CGG | - | chr2.3:4780022-4780041 | MS.gene78354:intron | 35.0% | |
GACACAGTATCATTATCTAG+TGG | + | chr2.3:4780143-4780162 | None:intergenic | 35.0% | |
GACCGATTGAAAAAAACCAA+GGG | - | chr2.3:4780300-4780319 | MS.gene78354:CDS | 35.0% | |
GAGAGACCAAAAAATACTCT+AGG | - | chr2.3:4779510-4779529 | MS.gene78354:intron | 35.0% | |
GAGTATGTTTGACAACTTTC+AGG | - | chr2.3:4781258-4781277 | MS.gene78354:intron | 35.0% | |
GGCAATGAGATAGAAAAAAG+AGG | + | chr2.3:4778768-4778787 | None:intergenic | 35.0% | |
GGTAACCAAAAGAACATCTT+TGG | - | chr2.3:4781213-4781232 | MS.gene78354:intron | 35.0% | |
GGTACACACATTATTATGAG+CGG | - | chr2.3:4780884-4780903 | MS.gene78354:intron | 35.0% | |
GTACTAATGGAGATATGGAT+TGG | - | chr2.3:4777835-4777854 | MS.gene78354:CDS | 35.0% | |
TAAAAATGTCTCGGGAATGT+GGG | + | chr2.3:4780775-4780794 | None:intergenic | 35.0% | |
TAAACATGGTTAGGGAATTG+AGG | - | chr2.3:4779742-4779761 | MS.gene78354:intron | 35.0% | |
TAGATACTCAAGACTTGAGT+TGG | - | chr2.3:4780203-4780222 | MS.gene78354:intron | 35.0% | |
TAGGGAATTGAGGATATTAG+TGG | - | chr2.3:4779752-4779771 | MS.gene78354:intron | 35.0% | |
TATGAAGCAGCTAAACAAGA+GGG | - | chr2.3:4780689-4780708 | MS.gene78354:CDS | 35.0% | |
TCAATTCCCTAACCATGTTT+AGG | + | chr2.3:4779743-4779762 | None:intergenic | 35.0% | |
TCAGTAATGTTAATGACGCT+TGG | - | chr2.3:4777871-4777890 | MS.gene78354:intron | 35.0% | |
TCCTACTTCGTCATTACAAT+TGG | - | chr2.3:4777698-4777717 | MS.gene78354:CDS | 35.0% | |
TCGTGCAATGATGCAAATTA+TGG | - | chr2.3:4780467-4780486 | MS.gene78354:intron | 35.0% | |
TGTAAAGTTTCCATACAGGA+GGG | - | chr2.3:4779452-4779471 | MS.gene78354:intron | 35.0% | |
TGTAGCCAGGTGATAAATTA+GGG | + | chr2.3:4778623-4778642 | None:intergenic | 35.0% | |
TTAAGTTTATAACCGAGGCT+TGG | - | chr2.3:4781626-4781645 | MS.gene78354:intron | 35.0% | |
TTACATGAACAGTTTGCATC+TGG | + | chr2.3:4781114-4781133 | None:intergenic | 35.0% | |
TTATGAAGCAGCTAAACAAG+AGG | - | chr2.3:4780688-4780707 | MS.gene78354:CDS | 35.0% | |
TTGAAGTGGACATATGCATA+TGG | - | chr2.3:4782366-4782385 | MS.gene78354:intron | 35.0% | |
! | AAGGGAAAAAAAGTATGGAG+TGG | + | chr2.3:4780937-4780956 | None:intergenic | 35.0% |
! | ACACACACATTTTCTGTGTT+TGG | - | chr2.3:4781137-4781156 | MS.gene78354:intron | 35.0% |
! | ATCATATAGCCTTACACCAT+AGG | + | chr2.3:4781042-4781061 | None:intergenic | 35.0% |
! | ATTGAAGTGCCAATATATCC+TGG | + | chr2.3:4778295-4778314 | None:intergenic | 35.0% |
! | GAATACTTGGAGTTCCTTTT+CGG | + | chr2.3:4782588-4782607 | None:intergenic | 35.0% |
! | GTAAAAATCGTGTCATTCAG+AGG | - | chr2.3:4781692-4781711 | MS.gene78354:intron | 35.0% |
! | GTCTATCCTTTTTATATGCC+AGG | - | chr2.3:4778274-4778293 | MS.gene78354:intron | 35.0% |
! | TAATCTCCTTTTATCTACGC+AGG | - | chr2.3:4780603-4780622 | MS.gene78354:intron | 35.0% |
! | TCTGTACCAGTTCATGTTTT+CGG | + | chr2.3:4779119-4779138 | None:intergenic | 35.0% |
! | TGCTTTTCCTTCTCATGTTT+TGG | - | chr2.3:4782957-4782976 | MS.gene78354:intron | 35.0% |
! | TGTACAAAGTGTCTCTTTCA+AGG | + | chr2.3:4782792-4782811 | None:intergenic | 35.0% |
! | TTTCTTGTCTTCTGCTGTTT+GGG | - | chr2.3:4778022-4778041 | MS.gene78354:intron | 35.0% |
! | TTTTCTTGTCTTCTGCTGTT+TGG | - | chr2.3:4778021-4778040 | MS.gene78354:intron | 35.0% |
! | TTTTCTTTCTCTTGCAGTCA+AGG | - | chr2.3:4781065-4781084 | MS.gene78354:intron | 35.0% |
! | TTTTGTGTTGCATGTGACTT+TGG | - | chr2.3:4781192-4781211 | MS.gene78354:intron | 35.0% |
!! | AAAAAGCATCATTAATCCCC+AGG | + | chr2.3:4780505-4780524 | None:intergenic | 35.0% |
!! | AAAAGCATCATTAATCCCCA+GGG | + | chr2.3:4780504-4780523 | None:intergenic | 35.0% |
!! | AAACATAGAATTTTGGCCCA+AGG | + | chr2.3:4781175-4781194 | None:intergenic | 35.0% |
!! | ATCCATACTGTTTTTCATGC+TGG | - | chr2.3:4778156-4778175 | MS.gene78354:intron | 35.0% |
!! | CATGCAGTTAATTTTGATGC+TGG | - | chr2.3:4778877-4778896 | MS.gene78354:intron | 35.0% |
!! | CTTTTTAGCATGCTCATGTT+CGG | + | chr2.3:4782403-4782422 | None:intergenic | 35.0% |
!! | GTTGTTTTGTAATCAACTCC+TGG | - | chr2.3:4781979-4781998 | MS.gene78354:intron | 35.0% |
!! | TCACGTCTTAAGTTGGAATA+TGG | - | chr2.3:4782844-4782863 | MS.gene78354:CDS | 35.0% |
!! | TCCATACTGTTTTTCATGCT+GGG | - | chr2.3:4778157-4778176 | MS.gene78354:intron | 35.0% |
!! | TGGATTGGTTCAAATTGTCA+TGG | - | chr2.3:4778964-4778983 | MS.gene78354:intron | 35.0% |
!!! | ATTTTTGGTCTTCTGAGTTG+AGG | - | chr2.3:4779277-4779296 | MS.gene78354:intron | 35.0% |
!!! | CACCCTTGGTTTTTTTCAAT+CGG | + | chr2.3:4780305-4780324 | None:intergenic | 35.0% |
!!! | GTTTCGCCTAGAGTATTTTT+TGG | + | chr2.3:4779519-4779538 | None:intergenic | 35.0% |
AACAGCTTCATTTGTGTCCT+TGG | + | chr2.3:4782229-4782248 | None:intergenic | 40.0% | |
AAGAATCAGATATCCGGGAA+CGG | - | chr2.3:4777614-4777633 | MS.gene78354:CDS | 40.0% | |
AAGATTCACAGTGCTTCTTG+CGG | - | chr2.3:4778131-4778150 | MS.gene78354:intron | 40.0% | |
AAGGAACTCCAAGTATTCCT+CGG | - | chr2.3:4782590-4782609 | MS.gene78354:CDS | 40.0% | |
AATACTCAGTGAACTGCTTC+AGG | - | chr2.3:4780109-4780128 | MS.gene78354:CDS | 40.0% | |
ACACACATTATTATGAGCGG+TGG | - | chr2.3:4780887-4780906 | MS.gene78354:intron | 40.0% | |
ACAGCTTCATTTGTGTCCTT+GGG | + | chr2.3:4782228-4782247 | None:intergenic | 40.0% | |
ACTTCAATTAACGATGGTCC+GGG | - | chr2.3:4778307-4778326 | MS.gene78354:intron | 40.0% | |
ACTTTACACGCATTCCCAAT+TGG | + | chr2.3:4779440-4779459 | None:intergenic | 40.0% | |
AGGAGGGTAAATCATATGGA+GGG | - | chr2.3:4779468-4779487 | MS.gene78354:intron | 40.0% | |
AGTGATTTGAGTCATGAACC+CGG | + | chr2.3:4782129-4782148 | None:intergenic | 40.0% | |
ATACTCTAGGCGAAACCATT+AGG | - | chr2.3:4779523-4779542 | MS.gene78354:intron | 40.0% | |
ATATGGGAGCAAAACACTCA+TGG | + | chr2.3:4779839-4779858 | None:intergenic | 40.0% | |
ATCAGTTAATCTGCTGGACA+CGG | + | chr2.3:4783290-4783309 | None:intergenic | 40.0% | |
ATGAAGCAGCTAAACAAGAG+GGG | - | chr2.3:4780690-4780709 | MS.gene78354:CDS | 40.0% | |
ATGGAGGGATAGTCAAATAG+AGG | - | chr2.3:4779483-4779502 | MS.gene78354:intron | 40.0% | |
ATTTACCTGTAACCAAGCCT+CGG | + | chr2.3:4781641-4781660 | None:intergenic | 40.0% | |
ATTTATCACCTGGCTACACT+TGG | - | chr2.3:4778625-4778644 | MS.gene78354:CDS | 40.0% | |
CACACATTATTATGAGCGGT+GGG | - | chr2.3:4780888-4780907 | MS.gene78354:intron | 40.0% | |
CACTTCAATTAACGATGGTC+CGG | - | chr2.3:4778306-4778325 | MS.gene78354:intron | 40.0% | |
CAGAATCCGAAAACATGAAC+TGG | - | chr2.3:4779110-4779129 | MS.gene78354:intron | 40.0% | |
CAGTGTACCTATGCAAATGT+CGG | - | chr2.3:4783331-4783350 | MS.gene78354:CDS | 40.0% | |
CAGTTCTTTGAGTACTTGCA+AGG | - | chr2.3:4782423-4782442 | MS.gene78354:intron | 40.0% | |
CATTAGGCAAGAAAGACTCT+AGG | - | chr2.3:4779539-4779558 | MS.gene78354:intron | 40.0% | |
CTAGAGTCTTTCTTGCCTAA+TGG | + | chr2.3:4779541-4779560 | None:intergenic | 40.0% | |
GACTACTCAACAGTCTAACA+AGG | + | chr2.3:4782186-4782205 | None:intergenic | 40.0% | |
GATAGAGTCCGAAGAAAAGT+TGG | - | chr2.3:4777906-4777925 | MS.gene78354:intron | 40.0% | |
GCACCTAATGGCAAAAACTT+TGG | - | chr2.3:4779673-4779692 | MS.gene78354:intron | 40.0% | |
GCATCAGGATTCTCATAAAC+TGG | + | chr2.3:4777945-4777964 | None:intergenic | 40.0% | |
GCTGGAATGTAAGTTGCATT+TGG | - | chr2.3:4778944-4778963 | MS.gene78354:intron | 40.0% | |
GTATTCATGATGGCACCTTA+TGG | - | chr2.3:4779617-4779636 | MS.gene78354:intron | 40.0% | |
GTGTAAAGTTTCCATACAGG+AGG | - | chr2.3:4779451-4779470 | MS.gene78354:intron | 40.0% | |
GTGTAGCCAGGTGATAAATT+AGG | + | chr2.3:4778624-4778643 | None:intergenic | 40.0% | |
TATGGGAGCAAAACACTCAT+GGG | + | chr2.3:4779838-4779857 | None:intergenic | 40.0% | |
TCAATCCATAAGCCATGACA+AGG | + | chr2.3:4780539-4780558 | None:intergenic | 40.0% | |
TCTGCTATCACGTCTTAAGT+TGG | - | chr2.3:4782837-4782856 | MS.gene78354:CDS | 40.0% | |
TCTTTGTTGGTGTGGCAATT+TGG | - | chr2.3:4782998-4783017 | MS.gene78354:intron | 40.0% | |
TGAAAAGAGCAGATTTGCAG+CGG | + | chr2.3:4781421-4781440 | None:intergenic | 40.0% | |
TGAGAATCCTGATGCTAAAG+AGG | - | chr2.3:4777950-4777969 | MS.gene78354:intron | 40.0% | |
TGCGTGTAAAGTTTCCATAC+AGG | - | chr2.3:4779448-4779467 | MS.gene78354:intron | 40.0% | |
TGGCAAAGAATTCATTGGAG+AGG | - | chr2.3:4780863-4780882 | MS.gene78354:intron | 40.0% | |
TGTCTTACCTCTTTAGCATC+AGG | + | chr2.3:4777960-4777979 | None:intergenic | 40.0% | |
TTAACTGCATGTTCACAACC+AGG | + | chr2.3:4778868-4778887 | None:intergenic | 40.0% | |
TTCAAGGAAACTCGAGGAAA+AGG | + | chr2.3:4782776-4782795 | None:intergenic | 40.0% | |
TTCCAAAATTGTGTGATGCG+TGG | - | chr2.3:4778653-4778672 | MS.gene78354:intron | 40.0% | |
TTGACTGAACTGATGCAATG+TGG | - | chr2.3:4781731-4781750 | MS.gene78354:intron | 40.0% | |
TTGGTCATCTTACCTTCCTT+GGG | - | chr2.3:4781156-4781175 | MS.gene78354:intron | 40.0% | |
TTTGCAGCGGTAAGCAATAA+TGG | + | chr2.3:4781408-4781427 | None:intergenic | 40.0% | |
TTTGGTCATCTTACCTTCCT+TGG | - | chr2.3:4781155-4781174 | MS.gene78354:intron | 40.0% | |
! | AAAGCATCATTAATCCCCAG+GGG | + | chr2.3:4780503-4780522 | None:intergenic | 40.0% |
! | AACCACGCATCACACAATTT+TGG | + | chr2.3:4778658-4778677 | None:intergenic | 40.0% |
! | ACTTAAGTTGTGACTCAGGT+TGG | + | chr2.3:4781612-4781631 | None:intergenic | 40.0% |
! | AGCGGTAAGCAATAATGGAA+AGG | + | chr2.3:4781403-4781422 | None:intergenic | 40.0% |
! | CAATCTAAAGTGCACTGAAG+AGG | - | chr2.3:4779033-4779052 | MS.gene78354:intron | 40.0% |
! | CCAACAAGCCAACTTTTCTT+CGG | + | chr2.3:4777917-4777936 | None:intergenic | 40.0% |
! | TAGCGCCAAAGATGTTCTTT+TGG | + | chr2.3:4781221-4781240 | None:intergenic | 40.0% |
! | TTGGTTAGGGCATTAGAGAA+TGG | - | chr2.3:4783154-4783173 | MS.gene78354:intron | 40.0% |
! | TTTTTCATAAACCCGTCCCA+AGG | - | chr2.3:4782209-4782228 | MS.gene78354:intron | 40.0% |
!! | ATAGAATTTTGGCCCAAGGA+AGG | + | chr2.3:4781171-4781190 | None:intergenic | 40.0% |
!! | CCATACTGTTTTTCATGCTG+GGG | - | chr2.3:4778158-4778177 | MS.gene78354:intron | 40.0% |
!! | GAAGCACTGTGAATCTTAGA+AGG | + | chr2.3:4778128-4778147 | None:intergenic | 40.0% |
!! | GCAGTTAATTTTGATGCTGG+TGG | - | chr2.3:4778880-4778899 | MS.gene78354:intron | 40.0% |
!!! | ATACCATTTTTGGTTGGGAC+TGG | - | chr2.3:4782729-4782748 | MS.gene78354:intron | 40.0% |
!!! | ATTGGATCTGGGAAGCATTT+TGG | - | chr2.3:4781335-4781354 | MS.gene78354:intron | 40.0% |
!!! | CAGTTTTGTTGTAGTTGGAG+GGG | - | chr2.3:4779337-4779356 | MS.gene78354:CDS | 40.0% |
!!! | GCAGTTTTGTTGTAGTTGGA+GGG | - | chr2.3:4779336-4779355 | MS.gene78354:intron | 40.0% |
!!! | TATGGGTTTTTTTTGCCCCT+GGG | - | chr2.3:4780485-4780504 | MS.gene78354:intron | 40.0% |
!!! | TGCAGTTTTGTTGTAGTTGG+AGG | - | chr2.3:4779335-4779354 | MS.gene78354:intron | 40.0% |
!!! | TTATGGGTTTTTTTTGCCCC+TGG | - | chr2.3:4780484-4780503 | MS.gene78354:intron | 40.0% |
AAATGGCCAAATGATAGCCG+AGG | - | chr2.3:4779960-4779979 | MS.gene78354:intron | 45.0% | |
ACGAGTTCAAAAAATGCGGC+AGG | - | chr2.3:4783220-4783239 | MS.gene78354:intron | 45.0% | |
ACTCCAGTCCCAACCAAAAA+TGG | + | chr2.3:4782735-4782754 | None:intergenic | 45.0% | |
ACTGAACTGATGCAATGTGG+AGG | - | chr2.3:4781734-4781753 | MS.gene78354:intron | 45.0% | |
AGTAAGGGAAAAAGCGGAAG+AGG | - | chr2.3:4783247-4783266 | MS.gene78354:intron | 45.0% | |
ATATTGCACGGCCCTAAACA+TGG | - | chr2.3:4779728-4779747 | MS.gene78354:intron | 45.0% | |
ATGCACTGCTGACAGAAACT+TGG | - | chr2.3:4781796-4781815 | MS.gene78354:intron | 45.0% | |
ATGGGTGAGTTATGACTGAG+AGG | + | chr2.3:4778789-4778808 | None:intergenic | 45.0% | |
ATGTCATATGCATGCACCCT+TGG | + | chr2.3:4780319-4780338 | None:intergenic | 45.0% | |
ATTAGGTGCGATCAGGTGAT+GGG | + | chr2.3:4779662-4779681 | None:intergenic | 45.0% | |
CAGGAGGGTAAATCATATGG+AGG | - | chr2.3:4779467-4779486 | MS.gene78354:intron | 45.0% | |
CATCTTAGCATCAAGCATCC+CGG | + | chr2.3:4778328-4778347 | None:intergenic | 45.0% | |
CCAAATCCTCCCTAATGCTT+TGG | + | chr2.3:4779565-4779584 | None:intergenic | 45.0% | |
CCCCAGCATGAAAAACAGTA+TGG | + | chr2.3:4778161-4778180 | None:intergenic | 45.0% | |
CGAGTTCAAAAAATGCGGCA+GGG | - | chr2.3:4783221-4783240 | MS.gene78354:intron | 45.0% | |
CTGAACTGATGCAATGTGGA+GGG | - | chr2.3:4781735-4781754 | MS.gene78354:intron | 45.0% | |
CTGCATTTCTTGATATCCCC+CGG | + | chr2.3:4779320-4779339 | None:intergenic | 45.0% | |
CTTCATTTGTGTCCTTGGGA+CGG | + | chr2.3:4782224-4782243 | None:intergenic | 45.0% | |
GAAAAAGCGGAAGAGGAAAG+GGG | - | chr2.3:4783254-4783273 | MS.gene78354:intron | 45.0% | |
GAATTCATCCAAGTGTAGCC+AGG | + | chr2.3:4778636-4778655 | None:intergenic | 45.0% | |
GCATAGCCTGCGTAGATAAA+AGG | + | chr2.3:4780612-4780631 | None:intergenic | 45.0% | |
GCTTCATCAATGTGCCGAAA+AGG | - | chr2.3:4782571-4782590 | MS.gene78354:CDS | 45.0% | |
GGAAAAAGCGGAAGAGGAAA+GGG | - | chr2.3:4783253-4783272 | MS.gene78354:intron | 45.0% | |
GTCTCTTTCAAGGAAACTCG+AGG | + | chr2.3:4782782-4782801 | None:intergenic | 45.0% | |
GTTAACAGCTTTCCCGTATG+TGG | - | chr2.3:4778065-4778084 | MS.gene78354:intron | 45.0% | |
TACACGGATGGAAACAAGGA+AGG | + | chr2.3:4781911-4781930 | None:intergenic | 45.0% | |
TCAATCGGTCTCTTGCACTT+GGG | + | chr2.3:4780290-4780309 | None:intergenic | 45.0% | |
TGAAGCAGCTAAACAAGAGG+GGG | - | chr2.3:4780691-4780710 | MS.gene78354:CDS | 45.0% | |
TGCAACCTTGTCATGGCTTA+TGG | - | chr2.3:4780531-4780550 | MS.gene78354:intron | 45.0% | |
TTCAATCGGTCTCTTGCACT+TGG | + | chr2.3:4780291-4780310 | None:intergenic | 45.0% | |
TTCATTTGTGTCCTTGGGAC+GGG | + | chr2.3:4782223-4782242 | None:intergenic | 45.0% | |
TTGGAGGGGATGTTTCACTT+CGG | - | chr2.3:4779351-4779370 | MS.gene78354:CDS | 45.0% | |
! | ACTCGTTGCTTTGCTTGTAG+CGG | + | chr2.3:4783206-4783225 | None:intergenic | 45.0% |
! | AGACTCTAGGCCAAAGCATT+AGG | - | chr2.3:4779552-4779571 | MS.gene78354:intron | 45.0% |
! | ATGATGGTGCCCAAATGGTA+TGG | - | chr2.3:4783076-4783095 | MS.gene78354:CDS | 45.0% |
! | CACTAATGATGGTGCCCAAA+TGG | - | chr2.3:4783071-4783090 | MS.gene78354:CDS | 45.0% |
! | CCAAAGCATTAGGGAGGATT+TGG | - | chr2.3:4779562-4779581 | MS.gene78354:intron | 45.0% |
! | GACTCTAGGCCAAAGCATTA+GGG | - | chr2.3:4779553-4779572 | MS.gene78354:intron | 45.0% |
! | GATTTTCGCACCAAACTAGC+TGG | - | chr2.3:4782641-4782660 | MS.gene78354:CDS | 45.0% |
! | TATAACCGAGGCTTGGTTAC+AGG | - | chr2.3:4781633-4781652 | MS.gene78354:intron | 45.0% |
! | TTTTGCCATTAGGTGCGATC+AGG | + | chr2.3:4779669-4779688 | None:intergenic | 45.0% |
!! | CCGAAGAAAAGTTGGCTTGT+TGG | - | chr2.3:4777914-4777933 | MS.gene78354:intron | 45.0% |
!! | GAGATATGGATTGGTGATGC+AGG | - | chr2.3:4777844-4777863 | MS.gene78354:intron | 45.0% |
!! | TACTGTTTTTCATGCTGGGG+AGG | - | chr2.3:4778161-4778180 | MS.gene78354:intron | 45.0% |
!!! | ATGGGTTTTTTTTGCCCCTG+GGG | - | chr2.3:4780486-4780505 | MS.gene78354:intron | 45.0% |
AACAGATGCCGCAAGTAAGC+TGG | + | chr2.3:4778091-4778110 | None:intergenic | 50.0% | |
AGGCAGAATCAGGTTTGGAG+AGG | - | chr2.3:4782549-4782568 | MS.gene78354:CDS | 50.0% | |
AGGTGAGGCAGAATCAGGTT+TGG | - | chr2.3:4782544-4782563 | MS.gene78354:CDS | 50.0% | |
AGTAGGATGCTTGCAGCAAC+TGG | + | chr2.3:4777685-4777704 | None:intergenic | 50.0% | |
ATATTAGGGAAGGGGAGGAG+AGG | + | chr2.3:4780424-4780443 | None:intergenic | 50.0% | |
ATCAACAGCAGCACCACAAG+CGG | + | chr2.3:4778359-4778378 | None:intergenic | 50.0% | |
CAAGTAAGCTGGCCACATAC+GGG | + | chr2.3:4778080-4778099 | None:intergenic | 50.0% | |
CACGGCCCTAAACATGGTTA+GGG | - | chr2.3:4779734-4779753 | MS.gene78354:intron | 50.0% | |
CATCACCTGATCGCACCTAA+TGG | - | chr2.3:4779661-4779680 | MS.gene78354:intron | 50.0% | |
CATGGTCAGACCATGGTGAA+AGG | - | chr2.3:4780639-4780658 | MS.gene78354:CDS | 50.0% | |
CATTAGGTGCGATCAGGTGA+TGG | + | chr2.3:4779663-4779682 | None:intergenic | 50.0% | |
CCAAACTAGCTGGATTGACC+AGG | - | chr2.3:4782651-4782670 | MS.gene78354:CDS | 50.0% | |
CCTGGTCAATCCAGCTAGTT+TGG | + | chr2.3:4782654-4782673 | None:intergenic | 50.0% | |
GCAAGTAAGCTGGCCACATA+CGG | + | chr2.3:4778081-4778100 | None:intergenic | 50.0% | |
GGAGTGGAAGCCTTACAGAT+TGG | + | chr2.3:4780921-4780940 | None:intergenic | 50.0% | |
GGCAGATCCGACATTTGCAT+AGG | + | chr2.3:4783341-4783360 | None:intergenic | 50.0% | |
GGGAAAAAGCGGAAGAGGAA+AGG | - | chr2.3:4783252-4783271 | MS.gene78354:intron | 50.0% | |
GGGAGCAGTAAGGGAAAAAG+CGG | - | chr2.3:4783241-4783260 | MS.gene78354:intron | 50.0% | |
GTATGTGGCCAGCTTACTTG+CGG | - | chr2.3:4778080-4778099 | MS.gene78354:intron | 50.0% | |
TATCATCTTCCTGCCGTTCC+CGG | + | chr2.3:4777630-4777649 | None:intergenic | 50.0% | |
TATCTACGCAGGCTATGCCT+TGG | - | chr2.3:4780614-4780633 | MS.gene78354:intron | 50.0% | |
TCAGACCATGGTGAAAGGAC+TGG | - | chr2.3:4780644-4780663 | MS.gene78354:CDS | 50.0% | |
TCTTCAGGTGAGGCAGAATC+AGG | - | chr2.3:4782539-4782558 | MS.gene78354:CDS | 50.0% | |
TGCAGATAGTTGAGTGCAGG+CGG | - | chr2.3:4782340-4782359 | MS.gene78354:intron | 50.0% | |
! | AGGGAGGATTTGGAACCGAA+TGG | - | chr2.3:4779572-4779591 | MS.gene78354:intron | 50.0% |
! | ATTGTGGCACAGTGTCGAAG+TGG | - | chr2.3:4779071-4779090 | MS.gene78354:intron | 50.0% |
! | CTTCAGCACCGAGGAATACT+TGG | + | chr2.3:4782601-4782620 | None:intergenic | 50.0% |
! | GGGCTAGCAACCAATCTGTA+AGG | - | chr2.3:4780908-4780927 | MS.gene78354:intron | 50.0% |
! | GTCTTCTGAGTTGAGGCTGA+TGG | - | chr2.3:4779284-4779303 | MS.gene78354:intron | 50.0% |
! | TCTAGGCCAAAGCATTAGGG+AGG | - | chr2.3:4779556-4779575 | MS.gene78354:intron | 50.0% |
! | TGAGTTGAGGCTGATGGAGT+TGG | - | chr2.3:4779290-4779309 | MS.gene78354:intron | 50.0% |
!! | CAAGTATTCCTCGGTGCTGA+AGG | - | chr2.3:4782599-4782618 | MS.gene78354:CDS | 50.0% |
AAATGCGGCAGGGAGCAGTA+AGG | - | chr2.3:4783231-4783250 | MS.gene78354:intron | 55.0% | |
AACCGCCAGTCCTTTCACCA+TGG | + | chr2.3:4780652-4780671 | None:intergenic | 55.0% | |
AAGTGAGGGAACCACAGCCT+CGG | + | chr2.3:4779980-4779999 | None:intergenic | 55.0% | |
AATGCGGCAGGGAGCAGTAA+GGG | - | chr2.3:4783232-4783251 | MS.gene78354:intron | 55.0% | |
AGATGTCCTGATCCCGCTTG+TGG | - | chr2.3:4778343-4778362 | MS.gene78354:CDS | 55.0% | |
AGCAGCTAAACAAGAGGGGG+TGG | - | chr2.3:4780694-4780713 | MS.gene78354:CDS | 55.0% | |
AGGATGCTTGCAGCAACTGG+TGG | + | chr2.3:4777682-4777701 | None:intergenic | 55.0% | |
ATCAGATATCCGGGAACGGC+AGG | - | chr2.3:4777618-4777637 | MS.gene78354:CDS | 55.0% | |
ATTGCACATCGCGCATGCAG+TGG | + | chr2.3:4783362-4783381 | None:intergenic | 55.0% | |
CATGGTCTGACCATGCACCA+AGG | + | chr2.3:4780634-4780653 | None:intergenic | 55.0% | |
CCAAATGATAGCCGAGGCTG+TGG | - | chr2.3:4779966-4779985 | MS.gene78354:intron | 55.0% | |
CCACAGCCTCGGCTATCATT+TGG | + | chr2.3:4779969-4779988 | None:intergenic | 55.0% | |
CGCTGCAGATAGTTGAGTGC+AGG | - | chr2.3:4782337-4782356 | MS.gene78354:intron | 55.0% | |
CTGTGCCACAATCCACTGGA+CGG | + | chr2.3:4779063-4779082 | None:intergenic | 55.0% | |
GACACTGTGCCACAATCCAC+TGG | + | chr2.3:4779067-4779086 | None:intergenic | 55.0% | |
GACCATGGTGAAAGGACTGG+CGG | - | chr2.3:4780647-4780666 | MS.gene78354:CDS | 55.0% | |
GCACGGCCCTAAACATGGTT+AGG | - | chr2.3:4779733-4779752 | MS.gene78354:intron | 55.0% | |
GCAGATAGTTGAGTGCAGGC+GGG | - | chr2.3:4782341-4782360 | MS.gene78354:intron | 55.0% | |
GCATGTTCACAACCAGGAGC+AGG | + | chr2.3:4778862-4778881 | None:intergenic | 55.0% | |
GCGCGATGTGCAATCAAGAG+CGG | - | chr2.3:4783368-4783387 | MS.gene78354:CDS | 55.0% | |
GCTTGCAGCAACTGGTGGTA+TGG | + | chr2.3:4777677-4777696 | None:intergenic | 55.0% | |
GGTCTCTTGCACTTGGGACA+CGG | + | chr2.3:4780284-4780303 | None:intergenic | 55.0% | |
GTTGAGGCTGATGGAGTTGG+TGG | - | chr2.3:4779293-4779312 | MS.gene78354:intron | 55.0% | |
TCAACAGCAGCACCACAAGC+GGG | + | chr2.3:4778358-4778377 | None:intergenic | 55.0% | |
! | CTTGGTGCATGGTCAGACCA+TGG | - | chr2.3:4780632-4780651 | MS.gene78354:CDS | 55.0% |
!! | AGTGCAGGCGGGTATTGAAG+TGG | - | chr2.3:4782352-4782371 | MS.gene78354:intron | 55.0% |
!! | CGATCAGGTGATGGGCTACA+TGG | + | chr2.3:4779654-4779673 | None:intergenic | 55.0% |
ACCAAGTGGTGTCCTGCTCC+TGG | - | chr2.3:4778847-4778866 | MS.gene78354:intron | 60.0% | |
ACCAGGAGCAGGACACCACT+TGG | + | chr2.3:4778851-4778870 | None:intergenic | 60.0% | |
TGAAGAGGCTCACCGTCCAG+TGG | - | chr2.3:4779048-4779067 | MS.gene78354:intron | 60.0% | |
! | GCAGGCTATGCCTTGGTGCA+TGG | - | chr2.3:4780621-4780640 | MS.gene78354:intron | 60.0% |
!! | CTGATGGAGTTGGTGGTCCG+GGG | - | chr2.3:4779300-4779319 | MS.gene78354:intron | 60.0% |
!! | GCTCACCGTCCAGTGGATTG+TGG | - | chr2.3:4779055-4779074 | MS.gene78354:intron | 60.0% |
!! | GCTGATGGAGTTGGTGGTCC+GGG | - | chr2.3:4779299-4779318 | MS.gene78354:intron | 60.0% |
!! | GGCTGATGGAGTTGGTGGTC+CGG | - | chr2.3:4779298-4779317 | MS.gene78354:intron | 60.0% |
!! | TGATGGAGTTGGTGGTCCGG+GGG | - | chr2.3:4779301-4779320 | MS.gene78354:intron | 60.0% |
AAGTGGCTCGAGCTCCGTCG+TGG | - | chr2.3:4779234-4779253 | MS.gene78354:intron | 65.0% | |
GCAGCACCACAAGCGGGATC+AGG | + | chr2.3:4778352-4778371 | None:intergenic | 65.0% | |
TAGACGGGCCTTCAGCACCG+AGG | + | chr2.3:4782610-4782629 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 4777595 | 4783396 | 4777595 | ID=MS.gene78354 |
chr2.3 | mRNA | 4777595 | 4783396 | 4777595 | ID=MS.gene78354.t1;Parent=MS.gene78354 |
chr2.3 | exon | 4783272 | 4783396 | 4783272 | ID=MS.gene78354.t1.exon1;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4783272 | 4783396 | 4783272 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4783020 | 4783125 | 4783020 | ID=MS.gene78354.t1.exon2;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4783020 | 4783125 | 4783020 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4782809 | 4782899 | 4782809 | ID=MS.gene78354.t1.exon3;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4782809 | 4782899 | 4782809 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4782523 | 4782695 | 4782523 | ID=MS.gene78354.t1.exon4;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4782523 | 4782695 | 4782523 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4782040 | 4782144 | 4782040 | ID=MS.gene78354.t1.exon5;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4782040 | 4782144 | 4782040 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4781860 | 4781948 | 4781860 | ID=MS.gene78354.t1.exon6;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4781860 | 4781948 | 4781860 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4780622 | 4780729 | 4780622 | ID=MS.gene78354.t1.exon7;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4780622 | 4780729 | 4780622 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4780276 | 4780366 | 4780276 | ID=MS.gene78354.t1.exon8;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4780276 | 4780366 | 4780276 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4780067 | 4780156 | 4780067 | ID=MS.gene78354.t1.exon9;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4780067 | 4780156 | 4780067 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4779862 | 4779909 | 4779862 | ID=MS.gene78354.t1.exon10;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4779862 | 4779909 | 4779862 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4779337 | 4779408 | 4779337 | ID=MS.gene78354.t1.exon11;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4779337 | 4779408 | 4779337 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4778547 | 4778646 | 4778547 | ID=MS.gene78354.t1.exon12;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4778547 | 4778646 | 4778547 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4778319 | 4778445 | 4778319 | ID=MS.gene78354.t1.exon13;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4778319 | 4778445 | 4778319 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
chr2.3 | exon | 4777595 | 4777862 | 4777595 | ID=MS.gene78354.t1.exon14;Parent=MS.gene78354.t1 |
chr2.3 | CDS | 4777595 | 4777862 | 4777595 | ID=cds.MS.gene78354.t1;Parent=MS.gene78354.t1 |
Gene Sequence |
Protein sequence |