Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82704.t1 | XP_003600052.1 | 96.5 | 425 | 15 | 0 | 11 | 435 | 71 | 495 | 7.40E-214 | 753.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82704.t1 | Q8RWQ5 | 64.3 | 429 | 140 | 2 | 11 | 435 | 71 | 490 | 1.0e-139 | 498.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82704.t1 | G7IXK2 | 96.5 | 425 | 15 | 0 | 11 | 435 | 71 | 495 | 5.3e-214 | 753.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051003 | MS.gene82704 | 0.824202 | 9.17E-54 | -1.69E-46 |
| MS.gene051343 | MS.gene82704 | 0.80738 | 5.20E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene82704 | 0.806339 | 8.63E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene82704 | 0.8318 | 1.36E-55 | -1.69E-46 |
| MS.gene052889 | MS.gene82704 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene82704 | 0.818531 | 1.87E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene82704 | 0.823282 | 1.51E-53 | -1.69E-46 |
| MS.gene056986 | MS.gene82704 | 0.843169 | 1.65E-58 | -1.69E-46 |
| MS.gene057034 | MS.gene82704 | 0.806215 | 9.17E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene82704 | 0.831548 | 1.57E-55 | -1.69E-46 |
| MS.gene058095 | MS.gene82704 | 0.800525 | 1.38E-48 | -1.69E-46 |
| MS.gene059146 | MS.gene82704 | 0.828086 | 1.09E-54 | -1.69E-46 |
| MS.gene059170 | MS.gene82704 | 0.825869 | 3.70E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene82704 | -0.800739 | 1.25E-48 | -1.69E-46 |
| MS.gene059901 | MS.gene82704 | -0.811486 | 6.83E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene016060 | MS.gene82704 | PPI |
| MS.gene82704 | MS.gene016058 | PPI |
| MS.gene82704 | MS.gene33133 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82704.t1 | MTR_3g051190 | 98.588 | 425 | 6 | 0 | 11 | 435 | 71 | 495 | 0.0 | 847 |
| MS.gene82704.t1 | MTR_3g008470 | 29.736 | 417 | 235 | 3 | 11 | 427 | 156 | 514 | 1.67e-46 | 169 |
| MS.gene82704.t1 | MTR_2g031810 | 27.094 | 406 | 223 | 6 | 31 | 428 | 9 | 349 | 3.47e-39 | 144 |
| MS.gene82704.t1 | MTR_2g031790 | 36.190 | 210 | 134 | 0 | 219 | 428 | 117 | 326 | 2.37e-38 | 142 |
| MS.gene82704.t1 | MTR_1g014250 | 26.118 | 425 | 238 | 8 | 11 | 428 | 107 | 462 | 1.13e-33 | 132 |
| MS.gene82704.t1 | MTR_1g014250 | 26.133 | 375 | 209 | 6 | 58 | 428 | 29 | 339 | 4.24e-30 | 120 |
| MS.gene82704.t1 | MTR_1g103530 | 26.567 | 335 | 188 | 6 | 13 | 347 | 4 | 280 | 4.02e-19 | 89.7 |
| MS.gene82704.t1 | MTR_1g103530 | 26.724 | 348 | 191 | 7 | 12 | 359 | 168 | 451 | 7.85e-19 | 89.4 |
| MS.gene82704.t1 | MTR_2g031770 | 29.371 | 143 | 92 | 2 | 11 | 145 | 78 | 219 | 6.82e-16 | 77.4 |
| MS.gene82704.t1 | MTR_1g103540 | 44.318 | 88 | 41 | 2 | 334 | 416 | 1 | 85 | 4.58e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82704.t1 | AT5G54860 | 64.000 | 425 | 148 | 2 | 11 | 435 | 71 | 490 | 0.0 | 546 |
| MS.gene82704.t1 | AT2G32040 | 29.630 | 405 | 226 | 7 | 12 | 416 | 51 | 396 | 4.05e-37 | 140 |
| MS.gene82704.t1 | AT2G32040 | 29.383 | 405 | 227 | 7 | 12 | 416 | 182 | 527 | 2.93e-36 | 140 |
| MS.gene82704.t1 | AT1G04570 | 33.962 | 212 | 140 | 0 | 216 | 427 | 137 | 348 | 1.22e-34 | 133 |
| MS.gene82704.t1 | AT1G64890 | 34.906 | 212 | 138 | 0 | 219 | 430 | 221 | 432 | 8.40e-34 | 132 |
| MS.gene82704.t1 | AT1G04570 | 33.962 | 212 | 140 | 0 | 216 | 427 | 285 | 496 | 1.93e-33 | 132 |
| MS.gene82704.t1 | AT1G79710 | 25.412 | 425 | 241 | 9 | 11 | 428 | 106 | 461 | 2.81e-32 | 128 |
| MS.gene82704.t1 | AT1G79710 | 25.412 | 425 | 241 | 9 | 11 | 428 | 106 | 461 | 2.81e-32 | 128 |
| MS.gene82704.t1 | AT5G10820 | 25.592 | 422 | 245 | 8 | 11 | 427 | 114 | 471 | 1.54e-31 | 126 |
| MS.gene82704.t1 | AT2G33280 | 32.243 | 214 | 145 | 0 | 219 | 432 | 107 | 320 | 2.39e-31 | 123 |
| MS.gene82704.t1 | AT2G33280 | 32.243 | 214 | 145 | 0 | 219 | 432 | 181 | 394 | 1.01e-30 | 123 |
| MS.gene82704.t1 | AT2G33280 | 32.243 | 214 | 145 | 0 | 219 | 432 | 289 | 502 | 1.71e-30 | 124 |
| MS.gene82704.t1 | AT5G25050 | 29.612 | 206 | 142 | 1 | 226 | 428 | 252 | 457 | 4.44e-26 | 110 |
| MS.gene82704.t1 | AT5G25040 | 27.442 | 215 | 153 | 1 | 217 | 428 | 94 | 308 | 6.53e-26 | 108 |
| MS.gene82704.t1 | AT5G25040 | 27.442 | 215 | 153 | 1 | 217 | 428 | 241 | 455 | 3.94e-25 | 107 |
| MS.gene82704.t1 | AT5G25040 | 32.278 | 158 | 107 | 0 | 271 | 428 | 323 | 480 | 4.85e-24 | 104 |
| MS.gene82704.t1 | AT5G25040 | 26.230 | 183 | 132 | 1 | 217 | 396 | 241 | 423 | 5.55e-17 | 83.2 |
| MS.gene82704.t1 | AT1G79710 | 21.547 | 362 | 208 | 9 | 11 | 365 | 106 | 398 | 4.27e-15 | 77.0 |
Find 95 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATTGTATCCCGATTAA+AGG | 0.188248 | 3.1:+38163109 | MS.gene82704:CDS |
| TTGGAGGTCTCCTGCAAATT+TGG | 0.210403 | 3.1:-38163952 | None:intergenic |
| GATGCACCTGTTGCTTCTTT+TGG | 0.267349 | 3.1:-38166599 | None:intergenic |
| ATCCGTTTACTTCCTTTAAT+CGG | 0.280491 | 3.1:-38163121 | None:intergenic |
| CTCCAGAATCTTCGATTTGC+TGG | 0.283430 | 3.1:-38164294 | None:intergenic |
| ATGCCTTTCCTAATCTTATC+TGG | 0.289468 | 3.1:+38166371 | MS.gene82704:CDS |
| TTTGGCTCGGCACTTGTTGA+TGG | 0.295783 | 3.1:+38165418 | MS.gene82704:CDS |
| TTCTAAGCGTCATATGCTTT+AGG | 0.310369 | 3.1:-38165204 | None:intergenic |
| TTGGTCAGGGCCAAATTTGC+AGG | 0.328122 | 3.1:+38163942 | MS.gene82704:intron |
| GGAATATGCGGGAGTTTGTT+AGG | 0.329268 | 3.1:+38164005 | MS.gene82704:CDS |
| AATAAAGTTCCTTCAATTCC+TGG | 0.338588 | 3.1:-38166407 | None:intergenic |
| ATCATAAATTGCTTTCTTCA+AGG | 0.340461 | 3.1:-38164351 | None:intergenic |
| TACCAGCAAATCGAAGATTC+TGG | 0.353963 | 3.1:+38164292 | MS.gene82704:CDS |
| TCGCCTTTGGTGTACCAGAT+AGG | 0.358572 | 3.1:+38165383 | MS.gene82704:CDS |
| GATAGGGTTATGGTGCTCTT+TGG | 0.362387 | 3.1:+38165400 | MS.gene82704:CDS |
| GAATAAGACTGTTGAAAGAT+TGG | 0.368387 | 3.1:-38165077 | None:intergenic |
| AAAGCTCGAAGCATCATTCT+TGG | 0.370525 | 3.1:+38165120 | MS.gene82704:CDS |
| TCTATATTGAACATAGATTC+AGG | 0.374425 | 3.1:+38166497 | MS.gene82704:CDS |
| ATTGGTTACCTCAAAATCAT+TGG | 0.394424 | 3.1:-38164395 | None:intergenic |
| TCCGTTTACTTCCTTTAATC+GGG | 0.395107 | 3.1:-38163120 | None:intergenic |
| ATCATTATCTTGGTCTTCAA+TGG | 0.396384 | 3.1:+38163974 | MS.gene82704:CDS |
| ATCTTGGTCTTCAATGGCTG+TGG | 0.396603 | 3.1:+38163980 | MS.gene82704:CDS |
| AAGTAAACGGATTTCGTACT+TGG | 0.400717 | 3.1:+38163132 | MS.gene82704:CDS |
| TGAAAGAAGGCAAGATCTTA+AGG | 0.404521 | 3.1:+38162864 | MS.gene82704:CDS |
| AAGAGCACCATAACCCTATC+TGG | 0.416214 | 3.1:-38165397 | None:intergenic |
| GAATATGCGGGAGTTTGTTA+GGG | 0.418448 | 3.1:+38164006 | MS.gene82704:CDS |
| AAGCTCGAAGCATCATTCTT+GGG | 0.419923 | 3.1:+38165121 | MS.gene82704:CDS |
| GTACGCGTTGTTGGTTGGTT+AGG | 0.423916 | 3.1:+38165148 | MS.gene82704:CDS |
| AAGGCAAGATCTTAAGGTTA+AGG | 0.427752 | 3.1:+38162870 | MS.gene82704:CDS |
| TTGGGGACGGTACGCGTTGT+TGG | 0.428599 | 3.1:+38165139 | MS.gene82704:CDS |
| TGGTGTACCAGATAGGGTTA+TGG | 0.430972 | 3.1:+38165390 | MS.gene82704:CDS |
| GCAAAGGATTTGCATACAAA+TGG | 0.433365 | 3.1:+38164164 | MS.gene82704:CDS |
| TTGAAGACCAAGATAATGAT+TGG | 0.443377 | 3.1:-38163971 | None:intergenic |
| AATAAGACTGTTGAAAGATT+GGG | 0.450409 | 3.1:-38165076 | None:intergenic |
| CTGTGCTCTCCCTTGTACCA+TGG | 0.460291 | 3.1:+38163164 | MS.gene82704:CDS |
| CTATGCCCTCCAGGAATTGA+AGG | 0.462869 | 3.1:+38166398 | MS.gene82704:CDS |
| CGCCTTTGGTGTACCAGATA+GGG | 0.464246 | 3.1:+38165384 | MS.gene82704:CDS |
| TTTCATGTCAATAAACAACT+TGG | 0.464904 | 3.1:+38166436 | MS.gene82704:CDS |
| ATAGTTGTCCAGATAAGATT+AGG | 0.465222 | 3.1:-38166379 | None:intergenic |
| GAGACCTCCAATCATTATCT+TGG | 0.465996 | 3.1:+38163964 | MS.gene82704:CDS |
| ATCAGAAACAGAAAAGCAAT+TGG | 0.472771 | 3.1:-38166575 | None:intergenic |
| TGGAGGACAGACCTATGTCT+TGG | 0.476709 | 3.1:+38165029 | MS.gene82704:intron |
| TTCTTGACTGTGCAAAACTT+AGG | 0.479731 | 3.1:+38163241 | MS.gene82704:CDS |
| AAATTGCTTTCTTCAAGGAA+TGG | 0.479777 | 3.1:-38164346 | None:intergenic |
| TCCCGATTAAAGGAAGTAAA+CGG | 0.487254 | 3.1:+38163119 | MS.gene82704:CDS |
| TCTGGAGAAAGGAGATTCCT+TGG | 0.489789 | 3.1:+38164310 | MS.gene82704:CDS |
| CTAAAATAAACCATGGTACA+AGG | 0.490097 | 3.1:-38163174 | None:intergenic |
| CTGATACCAAAAGAAGCAAC+AGG | 0.498367 | 3.1:+38166593 | MS.gene82704:CDS |
| GGTTATGGTGCTCTTTGGCT+CGG | 0.505871 | 3.1:+38165405 | MS.gene82704:CDS |
| CAGGTATGCTCATGTTGCGT+TGG | 0.512392 | 3.1:+38165315 | MS.gene82704:intron |
| TCTGGACAACTATGCCCTCC+AGG | 0.515434 | 3.1:+38166389 | MS.gene82704:CDS |
| TCTTGGTCTTCAATGGCTGT+GGG | 0.522835 | 3.1:+38163981 | MS.gene82704:CDS |
| AACAACTTGGGAACAACGAT+AGG | 0.523273 | 3.1:+38166449 | MS.gene82704:CDS |
| TGCAGATTGCCGTTGTGTCT+AGG | 0.528098 | 3.1:+38165353 | MS.gene82704:CDS |
| GGACGGTACGCGTTGTTGGT+TGG | 0.528967 | 3.1:+38165143 | MS.gene82704:CDS |
| TTCATGTCAATAAACAACTT+GGG | 0.529203 | 3.1:+38166437 | MS.gene82704:CDS |
| AAATCGAAGATTCTGGAGAA+AGG | 0.536470 | 3.1:+38164299 | MS.gene82704:CDS |
| CATGATAATAACTGTATGCA+AGG | 0.547185 | 3.1:-38164086 | None:intergenic |
| AGTTGAGGATTATATTGCAA+AGG | 0.550493 | 3.1:+38164148 | MS.gene82704:CDS |
| ATGGAACCACTTTGTTGCCA+AGG | 0.553047 | 3.1:-38164327 | None:intergenic |
| GCGTCATATGCTTTAGGTGA+CGG | 0.557890 | 3.1:-38165198 | None:intergenic |
| AGTCTTATTCTACTACGAAA+CGG | 0.561877 | 3.1:+38165090 | MS.gene82704:CDS |
| GCACAGTCAAGAATACCATC+AGG | 0.566177 | 3.1:-38163231 | None:intergenic |
| TTGCATACAAATGGTAGTAG+TGG | 0.583089 | 3.1:+38164173 | MS.gene82704:CDS |
| AATATGCGGGAGTTTGTTAG+GGG | 0.585466 | 3.1:+38164007 | MS.gene82704:CDS |
| AAAGATTGGGAACAGTAATG+TGG | 0.587892 | 3.1:-38165063 | None:intergenic |
| GGTTGGTTAGGACTTATGCT+CGG | 0.594212 | 3.1:+38165160 | MS.gene82704:CDS |
| TGGGAACAGTAATGTGGGCA+AGG | 0.597103 | 3.1:-38165057 | None:intergenic |
| ACAACTTGGGAACAACGATA+GGG | 0.598636 | 3.1:+38166450 | MS.gene82704:CDS |
| GAATTCAACATGGCACCTGA+TGG | 0.602006 | 3.1:+38163216 | MS.gene82704:CDS |
| AGCTCGAAGCATCATTCTTG+GGG | 0.605840 | 3.1:+38165122 | MS.gene82704:CDS |
| CGAAGCATCATTCTTGGGGA+CGG | 0.607115 | 3.1:+38165126 | MS.gene82704:CDS |
| ATGGCTGTGGGAGGAATATG+CGG | 0.607957 | 3.1:+38163993 | MS.gene82704:CDS |
| TGTCCAGATAAGATTAGGAA+AGG | 0.608005 | 3.1:-38166374 | None:intergenic |
| TAAAATAAACCATGGTACAA+GGG | 0.610741 | 3.1:-38163173 | None:intergenic |
| AAGATTGGGAACAGTAATGT+GGG | 0.612894 | 3.1:-38165062 | None:intergenic |
| CAACCTTGAGGAATTCAACA+TGG | 0.615312 | 3.1:+38163206 | MS.gene82704:CDS |
| TGGTCTTCAATGGCTGTGGG+AGG | 0.618541 | 3.1:+38163984 | MS.gene82704:CDS |
| GTGCCATGTTGAATTCCTCA+AGG | 0.618903 | 3.1:-38163209 | None:intergenic |
| AAGACCAAGATAATGATTGG+AGG | 0.620304 | 3.1:-38163968 | None:intergenic |
| ATCAACAACAACATCTGCCA+TGG | 0.622174 | 3.1:-38163269 | None:intergenic |
| CTTAAACCTAAAATAAACCA+TGG | 0.629672 | 3.1:-38163181 | None:intergenic |
| TAGGTGACGGTTATAAACGA+AGG | 0.632468 | 3.1:-38165185 | None:intergenic |
| GAGATTCCTTGGCAACAAAG+TGG | 0.632737 | 3.1:+38164321 | MS.gene82704:CDS |
| AACCCTATCTGGTACACCAA+AGG | 0.632946 | 3.1:-38165386 | None:intergenic |
| TAGGTTTAAGTTCAACCTTG+AGG | 0.633543 | 3.1:+38163194 | MS.gene82704:CDS |
| AAGTTCCTTCAATTCCTGGA+GGG | 0.637778 | 3.1:-38166403 | None:intergenic |
| TGGCTGTGGGAGGAATATGC+GGG | 0.640200 | 3.1:+38163994 | MS.gene82704:CDS |
| TAAAACTTCGCTATTTACAG+AGG | 0.655075 | 3.1:-38164126 | None:intergenic |
| AATCTGCAGAAGATTCAAGA+AGG | 0.662867 | 3.1:-38165338 | None:intergenic |
| GCAAAACTTAGGATCAGCCA+TGG | 0.664884 | 3.1:+38163252 | MS.gene82704:CDS |
| AAAGTTCCTTCAATTCCTGG+AGG | 0.671510 | 3.1:-38166404 | None:intergenic |
| CTTATTCTACTACGAAACGG+AGG | 0.704156 | 3.1:+38165093 | MS.gene82704:CDS |
| TGTTGATGCAATGATAGCTG+AGG | 0.705713 | 3.1:+38163285 | MS.gene82704:CDS |
| ATATGCGGGAGTTTGTTAGG+GGG | 0.728603 | 3.1:+38164008 | MS.gene82704:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACTATAATGTTTTATATA+GGG | + | chr3.1:38165877-38165896 | MS.gene82704:intron | 10.0% |
| !!! | TTTTTTGTAAGTTAAATAAT+TGG | - | chr3.1:38164759-38164778 | None:intergenic | 10.0% |
| !! | AAAAAAAAATACTATCTTTC+AGG | - | chr3.1:38165674-38165693 | None:intergenic | 15.0% |
| !! | AAAAAAAATACTATCTTTCA+GGG | - | chr3.1:38165673-38165692 | None:intergenic | 15.0% |
| !! | ACTAATAAAAAGTAATGTTT+CGG | + | chr3.1:38164848-38164867 | MS.gene82704:intron | 15.0% |
| !! | CAAATATAATCATATATGAA+TGG | - | chr3.1:38164510-38164529 | None:intergenic | 15.0% |
| !!! | AAAGTAGATATTTGAAATTT+TGG | + | chr3.1:38164422-38164441 | MS.gene82704:intron | 15.0% |
| !!! | ATAGTATTTTTTTTTGCTTA+TGG | + | chr3.1:38165679-38165698 | MS.gene82704:intron | 15.0% |
| !!! | CAAACTATAATGTTTTATAT+AGG | + | chr3.1:38165876-38165895 | MS.gene82704:intron | 15.0% |
| !! | CAAATATCTACTTTAATGAT+TGG | - | chr3.1:38164416-38164435 | None:intergenic | 20.0% |
| !! | TTGATCTAAAAACTGAAATA+AGG | - | chr3.1:38163511-38163530 | None:intergenic | 20.0% |
| !!! | AAAAGATGATATCTTCATTT+TGG | + | chr3.1:38165574-38165593 | MS.gene82704:intron | 20.0% |
| !!! | ATGGAGATTATCTTTTTAAT+TGG | - | chr3.1:38164719-38164738 | None:intergenic | 20.0% |
| !!! | CTGTTTACTTTTTAAGATTA+TGG | + | chr3.1:38164445-38164464 | MS.gene82704:intron | 20.0% |
| !!! | TATGTTCTTCTTTTTATTAC+AGG | + | chr3.1:38165296-38165315 | MS.gene82704:intron | 20.0% |
| ! | AACACTTAATCATAGAGAAT+AGG | - | chr3.1:38163915-38163934 | None:intergenic | 25.0% |
| ! | AAGGATGTAACACAAAAAAA+TGG | - | chr3.1:38166074-38166093 | None:intergenic | 25.0% |
| ! | AATAAGACTGTTGAAAGATT+GGG | - | chr3.1:38165079-38165098 | None:intergenic | 25.0% |
| ! | AATAATTGGCCATAATGTAA+AGG | - | chr3.1:38164745-38164764 | None:intergenic | 25.0% |
| ! | AGTACAAGAAAAAGAAAGAA+GGG | + | chr3.1:38164239-38164258 | MS.gene82704:CDS | 25.0% |
| ! | ATCATAAATTGCTTTCTTCA+AGG | - | chr3.1:38164354-38164373 | None:intergenic | 25.0% |
| ! | ATTAACCAAACCAGATTATA+AGG | - | chr3.1:38163073-38163092 | None:intergenic | 25.0% |
| ! | CAGTAACTATACAAACTAAA+CGG | - | chr3.1:38163004-38163023 | None:intergenic | 25.0% |
| ! | CTTAAACCTAAAATAAACCA+TGG | - | chr3.1:38163184-38163203 | None:intergenic | 25.0% |
| ! | TAAAATAAACCATGGTACAA+GGG | - | chr3.1:38163176-38163195 | None:intergenic | 25.0% |
| ! | TAAAGGGACTAATTCAATAT+GGG | - | chr3.1:38165743-38165762 | None:intergenic | 25.0% |
| ! | TAGTACAAGAAAAAGAAAGA+AGG | + | chr3.1:38164238-38164257 | MS.gene82704:CDS | 25.0% |
| ! | TATCTTGGACAATGAAATTA+GGG | - | chr3.1:38163346-38163365 | None:intergenic | 25.0% |
| ! | TCAAATACATTATCTACCAA+GGG | + | chr3.1:38164821-38164840 | MS.gene82704:intron | 25.0% |
| ! | TCTATATTGAACATAGATTC+AGG | + | chr3.1:38166497-38166516 | MS.gene82704:CDS | 25.0% |
| ! | TGAAGCATAATGATTTGATA+TGG | + | chr3.1:38166047-38166066 | MS.gene82704:intron | 25.0% |
| ! | TTAAAGGGACTAATTCAATA+TGG | - | chr3.1:38165744-38165763 | None:intergenic | 25.0% |
| ! | TTATCTTGGACAATGAAATT+AGG | - | chr3.1:38163347-38163366 | None:intergenic | 25.0% |
| ! | TTCAAATACATTATCTACCA+AGG | + | chr3.1:38164820-38164839 | MS.gene82704:intron | 25.0% |
| ! | TTCATGTCAATAAACAACTT+GGG | + | chr3.1:38166437-38166456 | MS.gene82704:CDS | 25.0% |
| ! | TTTCATGTCAATAAACAACT+TGG | + | chr3.1:38166436-38166455 | MS.gene82704:CDS | 25.0% |
| !! | ACCGAAAAAGTGTATATTAA+AGG | + | chr3.1:38165906-38165925 | MS.gene82704:intron | 25.0% |
| !! | CCGAAAAAGTGTATATTAAA+GGG | + | chr3.1:38165907-38165926 | MS.gene82704:intron | 25.0% |
| !! | TGTTTTCAACACATATTACT+CGG | - | chr3.1:38162973-38162992 | None:intergenic | 25.0% |
| !! | TTTGCAAAGTTCTCTTTTTA+AGG | + | chr3.1:38163640-38163659 | MS.gene82704:intron | 25.0% |
| !!! | AGCTATTTTTGTAAGCTATT+TGG | - | chr3.1:38163793-38163812 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGTGTTACATCCT+TGG | + | chr3.1:38166073-38166092 | MS.gene82704:intron | 25.0% |
| !!! | CCCTTTAATATACACTTTTT+CGG | - | chr3.1:38165910-38165929 | None:intergenic | 25.0% |
| !!! | CTTTTTAATTGGCTGAAAAT+TGG | - | chr3.1:38164708-38164727 | None:intergenic | 25.0% |
| !!! | GCTATTTTTGTAAGCTATTT+GGG | - | chr3.1:38163792-38163811 | None:intergenic | 25.0% |
| !!! | TCCAATGTTTGTGTTTTTAT+CGG | + | chr3.1:38164634-38164653 | MS.gene82704:intron | 25.0% |
| AAATTGCTTTCTTCAAGGAA+TGG | - | chr3.1:38164349-38164368 | None:intergenic | 30.0% | |
| AATAAAGTTCCTTCAATTCC+TGG | - | chr3.1:38166410-38166429 | None:intergenic | 30.0% | |
| AATATGTGTTGAAAACAGCA+AGG | + | chr3.1:38162976-38162995 | MS.gene82704:intron | 30.0% | |
| AATTCTCATGTAAGCAACTA+AGG | + | chr3.1:38165228-38165247 | MS.gene82704:intron | 30.0% | |
| ACAAACCTTTAATGTCTACA+TGG | - | chr3.1:38164682-38164701 | None:intergenic | 30.0% | |
| ACCGATAAAAACACAAACAT+TGG | - | chr3.1:38164638-38164657 | None:intergenic | 30.0% | |
| AGAAATACATCCATCATAGA+AGG | - | chr3.1:38163546-38163565 | None:intergenic | 30.0% | |
| AGTTGAGGATTATATTGCAA+AGG | + | chr3.1:38164148-38164167 | MS.gene82704:CDS | 30.0% | |
| ATAGTTGTCCAGATAAGATT+AGG | - | chr3.1:38166382-38166401 | None:intergenic | 30.0% | |
| ATCAGAAACAGAAAAGCAAT+TGG | - | chr3.1:38166578-38166597 | None:intergenic | 30.0% | |
| ATCCGTTTACTTCCTTTAAT+CGG | - | chr3.1:38163124-38163143 | None:intergenic | 30.0% | |
| ATTGGTTACCTCAAAATCAT+TGG | - | chr3.1:38164398-38164417 | None:intergenic | 30.0% | |
| CAATATGCAACAGTTTATCT+TGG | - | chr3.1:38163361-38163380 | None:intergenic | 30.0% | |
| CATGATAATAACTGTATGCA+AGG | - | chr3.1:38164089-38164108 | None:intergenic | 30.0% | |
| CTAAAATAAACCATGGTACA+AGG | - | chr3.1:38163177-38163196 | None:intergenic | 30.0% | |
| CTATCTTTCAGGGATTAAAA+AGG | - | chr3.1:38165663-38165682 | None:intergenic | 30.0% | |
| GAATAAGACTGTTGAAAGAT+TGG | - | chr3.1:38165080-38165099 | None:intergenic | 30.0% | |
| TAAAACTTCGCTATTTACAG+AGG | - | chr3.1:38164129-38164148 | None:intergenic | 30.0% | |
| TACAAGAACTAATTCAGCAT+AGG | + | chr3.1:38165816-38165835 | MS.gene82704:intron | 30.0% | |
| TCAAATTAGTCAATCCAAAC+AGG | - | chr3.1:38163666-38163685 | None:intergenic | 30.0% | |
| TCCAAAGAGAAAAATCAGAA+GGG | - | chr3.1:38166335-38166354 | None:intergenic | 30.0% | |
| TGATTAAGTGTTTGCTTTGT+TGG | + | chr3.1:38163923-38163942 | MS.gene82704:intron | 30.0% | |
| TTCCAAAGAGAAAAATCAGA+AGG | - | chr3.1:38166336-38166355 | None:intergenic | 30.0% | |
| TTGAAGACCAAGATAATGAT+TGG | - | chr3.1:38163974-38163993 | None:intergenic | 30.0% | |
| ! | AATAGGTATTACTAGCTTAG+AGG | + | chr3.1:38165992-38166011 | MS.gene82704:intron | 30.0% |
| ! | AATGAGTTGAAAACAGCTTA+TGG | - | chr3.1:38163757-38163776 | None:intergenic | 30.0% |
| ! | AGAATCTCTGTTTTATGTTG+TGG | + | chr3.1:38165009-38165028 | MS.gene82704:intron | 30.0% |
| ! | ATAGGTATTACTAGCTTAGA+GGG | + | chr3.1:38165993-38166012 | MS.gene82704:intron | 30.0% |
| ! | ATCATTATCTTGGTCTTCAA+TGG | + | chr3.1:38163974-38163993 | MS.gene82704:CDS | 30.0% |
| ! | ATTATCATGCTTTTCTGTGA+AGG | + | chr3.1:38164100-38164119 | MS.gene82704:CDS | 30.0% |
| ! | ATTATTAGCTTCATTCTGTG+AGG | - | chr3.1:38164960-38164979 | None:intergenic | 30.0% |
| ! | CTTTTTATTAGTTGAACCCT+TGG | - | chr3.1:38164840-38164859 | None:intergenic | 30.0% |
| ! | GATATTTTTCCTAGACACAA+CGG | - | chr3.1:38165365-38165384 | None:intergenic | 30.0% |
| ! | TCTCTTTGGAAAAAAAATGC+AGG | + | chr3.1:38166345-38166364 | MS.gene82704:intron | 30.0% |
| ! | TCTTTTGACAATCTTCTGTT+AGG | + | chr3.1:38166521-38166540 | MS.gene82704:CDS | 30.0% |
| !! | AGTCTTATTCTACTACGAAA+CGG | + | chr3.1:38165090-38165109 | MS.gene82704:CDS | 30.0% |
| !! | CTAAGGATTGTTTTATTGGT+TGG | + | chr3.1:38165245-38165264 | MS.gene82704:intron | 30.0% |
| !! | CTTGTACCATGGTTTATTTT+AGG | + | chr3.1:38163175-38163194 | MS.gene82704:CDS | 30.0% |
| !! | GCAACTAAGGATTGTTTTAT+TGG | + | chr3.1:38165241-38165260 | MS.gene82704:intron | 30.0% |
| !!! | AAATAGCGAAGTTTTAGTTG+AGG | + | chr3.1:38164133-38164152 | MS.gene82704:CDS | 30.0% |
| !!! | TAGTTTGTTCCTCATTGTTT+TGG | - | chr3.1:38165863-38165882 | None:intergenic | 30.0% |
| !!! | TTTTTCAAGCACATCTCAAT+AGG | + | chr3.1:38165975-38165994 | MS.gene82704:intron | 30.0% |
| AAAGATTGGGAACAGTAATG+TGG | - | chr3.1:38165066-38165085 | None:intergenic | 35.0% | |
| AACAAACACACACTCTAATG+AGG | - | chr3.1:38164920-38164939 | None:intergenic | 35.0% | |
| AACATGAAAATCAGCACGAA+TGG | + | chr3.1:38165540-38165559 | MS.gene82704:intron | 35.0% | |
| AAGACCAAGATAATGATTGG+AGG | - | chr3.1:38163971-38163990 | None:intergenic | 35.0% | |
| AAGATTGGGAACAGTAATGT+GGG | - | chr3.1:38165065-38165084 | None:intergenic | 35.0% | |
| AAGGCAAGATCTTAAGGTTA+AGG | + | chr3.1:38162870-38162889 | MS.gene82704:CDS | 35.0% | |
| AATCTGCAGAAGATTCAAGA+AGG | - | chr3.1:38165341-38165360 | None:intergenic | 35.0% | |
| AATTGGCCATAATGTAAAGG+AGG | - | chr3.1:38164742-38164761 | None:intergenic | 35.0% | |
| AGCATAGGCCAAATATTACA+CGG | + | chr3.1:38165831-38165850 | MS.gene82704:intron | 35.0% | |
| ATCAATCCAAATAGACTCCA+AGG | - | chr3.1:38166093-38166112 | None:intergenic | 35.0% | |
| ATGCCTTTCCTAATCTTATC+TGG | + | chr3.1:38166371-38166390 | MS.gene82704:CDS | 35.0% | |
| ATTTACTTTATCACTGCACC+TGG | + | chr3.1:38165945-38165964 | MS.gene82704:intron | 35.0% | |
| CACATACAATGCAAAGAAAC+TGG | - | chr3.1:38163580-38163599 | None:intergenic | 35.0% | |
| CATTTGTCAACCTTCTATGA+TGG | + | chr3.1:38163533-38163552 | MS.gene82704:intron | 35.0% | |
| CCTTTAATGTCTACATGGTT+CGG | - | chr3.1:38164677-38164696 | None:intergenic | 35.0% | |
| CTTCCAATCTCTCAATACTA+CGG | + | chr3.1:38163406-38163425 | MS.gene82704:intron | 35.0% | |
| GCAAAGGATTTGCATACAAA+TGG | + | chr3.1:38164164-38164183 | MS.gene82704:CDS | 35.0% | |
| GGTTTAGTCCGTGTAATATT+TGG | - | chr3.1:38165842-38165861 | None:intergenic | 35.0% | |
| GTCACAAAATTAAAGCGATC+TGG | - | chr3.1:38163462-38163481 | None:intergenic | 35.0% | |
| TATGAAATGTGCTCTCAACA+AGG | - | chr3.1:38164477-38164496 | None:intergenic | 35.0% | |
| TCATAGAGAATAGGCATGTT+TGG | - | chr3.1:38163906-38163925 | None:intergenic | 35.0% | |
| TCCCGATTAAAGGAAGTAAA+CGG | + | chr3.1:38163119-38163138 | MS.gene82704:CDS | 35.0% | |
| TCCGTTTACTTCCTTTAATC+GGG | - | chr3.1:38163123-38163142 | None:intergenic | 35.0% | |
| TCTAGGAAAAATATCGCCTT+TGG | + | chr3.1:38165370-38165389 | MS.gene82704:CDS | 35.0% | |
| TCTGATTGTATCCCGATTAA+AGG | + | chr3.1:38163109-38163128 | MS.gene82704:CDS | 35.0% | |
| TGAAAGAAGGCAAGATCTTA+AGG | + | chr3.1:38162864-38162883 | MS.gene82704:CDS | 35.0% | |
| TGCTTCCTTATAATCTGGTT+TGG | + | chr3.1:38163065-38163084 | MS.gene82704:intron | 35.0% | |
| TGCTTGAAAAAGATGAATCC+AGG | - | chr3.1:38165966-38165985 | None:intergenic | 35.0% | |
| TGTCCAGATAAGATTAGGAA+AGG | - | chr3.1:38166377-38166396 | None:intergenic | 35.0% | |
| TTACATCCTTGGAGTCTATT+TGG | + | chr3.1:38166084-38166103 | MS.gene82704:intron | 35.0% | |
| TTCTAAGCGTCATATGCTTT+AGG | - | chr3.1:38165207-38165226 | None:intergenic | 35.0% | |
| TTCTTGACTGTGCAAAACTT+AGG | + | chr3.1:38163241-38163260 | MS.gene82704:CDS | 35.0% | |
| TTGCATACAAATGGTAGTAG+TGG | + | chr3.1:38164173-38164192 | MS.gene82704:CDS | 35.0% | |
| TTGGAAGCTTATCTATATGC+AGG | - | chr3.1:38163393-38163412 | None:intergenic | 35.0% | |
| ! | AAATCGAAGATTCTGGAGAA+AGG | + | chr3.1:38164299-38164318 | MS.gene82704:CDS | 35.0% |
| ! | AAGTAAACGGATTTCGTACT+TGG | + | chr3.1:38163132-38163151 | MS.gene82704:CDS | 35.0% |
| ! | ATCTCTGTTTTATGTTGTGG+AGG | + | chr3.1:38165012-38165031 | MS.gene82704:intron | 35.0% |
| ! | TAACAGTTTTCATTCCTCAC+TGG | + | chr3.1:38165625-38165644 | MS.gene82704:intron | 35.0% |
| ! | TAGGTTTAAGTTCAACCTTG+AGG | + | chr3.1:38163194-38163213 | MS.gene82704:CDS | 35.0% |
| ! | TTAGACAGCCAATGATTTTG+AGG | + | chr3.1:38164387-38164406 | MS.gene82704:CDS | 35.0% |
| ! | TTTTTGCTTAAGCATGTGCA+TGG | + | chr3.1:38165494-38165513 | MS.gene82704:intron | 35.0% |
| !! | TGGTTTGGTTAATGATGAAC+AGG | + | chr3.1:38163080-38163099 | MS.gene82704:intron | 35.0% |
| !!! | ATTCGTGCTGATTTTCATGT+TGG | - | chr3.1:38165541-38165560 | None:intergenic | 35.0% |
| !!! | TTCTCTTTTTAAGGCCTGTT+TGG | + | chr3.1:38163649-38163668 | MS.gene82704:intron | 35.0% |
| AAAGTTCCTTCAATTCCTGG+AGG | - | chr3.1:38166407-38166426 | None:intergenic | 40.0% | |
| AACAACTTGGGAACAACGAT+AGG | + | chr3.1:38166449-38166468 | MS.gene82704:CDS | 40.0% | |
| AAGCTATTTGGGAGAGCTTA+TGG | - | chr3.1:38163781-38163800 | None:intergenic | 40.0% | |
| AAGTTCCTTCAATTCCTGGA+GGG | - | chr3.1:38166406-38166425 | None:intergenic | 40.0% | |
| ACAACTTGGGAACAACGATA+GGG | + | chr3.1:38166450-38166469 | MS.gene82704:CDS | 40.0% | |
| ATCAACAACAACATCTGCCA+TGG | - | chr3.1:38163272-38163291 | None:intergenic | 40.0% | |
| CAACCTTGAGGAATTCAACA+TGG | + | chr3.1:38163206-38163225 | MS.gene82704:CDS | 40.0% | |
| CACACTGCTTCCTTATAATC+TGG | + | chr3.1:38163060-38163079 | MS.gene82704:intron | 40.0% | |
| CATAAGCTCTTCACTCTTCA+GGG | + | chr3.1:38166214-38166233 | MS.gene82704:intron | 40.0% | |
| CCGAACCATGTAGACATTAA+AGG | + | chr3.1:38164674-38164693 | MS.gene82704:intron | 40.0% | |
| CGGACTAAACCAAAACAATG+AGG | + | chr3.1:38165851-38165870 | MS.gene82704:intron | 40.0% | |
| CTCCATCCTCCTTTACATTA+TGG | + | chr3.1:38164733-38164752 | MS.gene82704:intron | 40.0% | |
| CTGATACCAAAAGAAGCAAC+AGG | + | chr3.1:38166593-38166612 | MS.gene82704:CDS | 40.0% | |
| CTTATTCTACTACGAAACGG+AGG | + | chr3.1:38165093-38165112 | MS.gene82704:CDS | 40.0% | |
| GAGACCTCCAATCATTATCT+TGG | + | chr3.1:38163964-38163983 | MS.gene82704:CDS | 40.0% | |
| GCAAGGAAAAACCAAGACAT+AGG | - | chr3.1:38165043-38165062 | None:intergenic | 40.0% | |
| GGACAAAATTTAAGCCAGTG+AGG | - | chr3.1:38165642-38165661 | None:intergenic | 40.0% | |
| TACCAGCAAATCGAAGATTC+TGG | + | chr3.1:38164292-38164311 | MS.gene82704:CDS | 40.0% | |
| TCATAAGCTCTTCACTCTTC+AGG | + | chr3.1:38166213-38166232 | MS.gene82704:intron | 40.0% | |
| TGTTGATGCAATGATAGCTG+AGG | + | chr3.1:38163285-38163304 | MS.gene82704:CDS | 40.0% | |
| ! | AAAGCTCGAAGCATCATTCT+TGG | + | chr3.1:38165120-38165139 | MS.gene82704:CDS | 40.0% |
| ! | AAGCTCGAAGCATCATTCTT+GGG | + | chr3.1:38165121-38165140 | MS.gene82704:CDS | 40.0% |
| ! | AAGTGTTTGCTTTGTTGGTC+AGG | + | chr3.1:38163928-38163947 | MS.gene82704:intron | 40.0% |
| ! | ACAACGATAGGGTCTTTTGT+AGG | + | chr3.1:38166461-38166480 | MS.gene82704:CDS | 40.0% |
| ! | AGTGTTTGCTTTGTTGGTCA+GGG | + | chr3.1:38163929-38163948 | MS.gene82704:intron | 40.0% |
| ! | GCCCTTCTGATTTTTCTCTT+TGG | + | chr3.1:38166331-38166350 | MS.gene82704:intron | 40.0% |
| ! | TAGGTGACGGTTATAAACGA+AGG | - | chr3.1:38165188-38165207 | None:intergenic | 40.0% |
| !! | AATATGCGGGAGTTTGTTAG+GGG | + | chr3.1:38164007-38164026 | MS.gene82704:CDS | 40.0% |
| !! | GAATATGCGGGAGTTTGTTA+GGG | + | chr3.1:38164006-38164025 | MS.gene82704:CDS | 40.0% |
| AACCCTATCTGGTACACCAA+AGG | - | chr3.1:38165389-38165408 | None:intergenic | 45.0% | |
| ATGGAACCACTTTGTTGCCA+AGG | - | chr3.1:38164330-38164349 | None:intergenic | 45.0% | |
| ATGTCCGACATCAACACATC+TGG | + | chr3.1:38164560-38164579 | MS.gene82704:intron | 45.0% | |
| CACACACTCTAATGAGGAGT+AGG | - | chr3.1:38164914-38164933 | None:intergenic | 45.0% | |
| GAATTCAACATGGCACCTGA+TGG | + | chr3.1:38163216-38163235 | MS.gene82704:CDS | 45.0% | |
| GAGATTCCTTGGCAACAAAG+TGG | + | chr3.1:38164321-38164340 | MS.gene82704:CDS | 45.0% | |
| GATAGGGTTATGGTGCTCTT+TGG | + | chr3.1:38165400-38165419 | MS.gene82704:CDS | 45.0% | |
| GATTCCATGAAGTGCATGCA+TGG | - | chr3.1:38163620-38163639 | None:intergenic | 45.0% | |
| GCAAAACTTAGGATCAGCCA+TGG | + | chr3.1:38163252-38163271 | MS.gene82704:CDS | 45.0% | |
| GCACAGTCAAGAATACCATC+AGG | - | chr3.1:38163234-38163253 | None:intergenic | 45.0% | |
| GGCCATAATGTAAAGGAGGA+TGG | - | chr3.1:38164738-38164757 | None:intergenic | 45.0% | |
| GTGCCATGTTGAATTCCTCA+AGG | - | chr3.1:38163212-38163231 | None:intergenic | 45.0% | |
| TCAATACTACGGACCAGTGA+AGG | + | chr3.1:38163417-38163436 | MS.gene82704:intron | 45.0% | |
| TCTGGAGAAAGGAGATTCCT+TGG | + | chr3.1:38164310-38164329 | MS.gene82704:CDS | 45.0% | |
| TGAACCATGCATGCACTTCA+TGG | + | chr3.1:38163613-38163632 | MS.gene82704:intron | 45.0% | |
| TGGTGTACCAGATAGGGTTA+TGG | + | chr3.1:38165390-38165409 | MS.gene82704:CDS | 45.0% | |
| TGTCCGACATCAACACATCT+GGG | + | chr3.1:38164561-38164580 | MS.gene82704:intron | 45.0% | |
| TTGGAGGTCTCCTGCAAATT+TGG | - | chr3.1:38163955-38163974 | None:intergenic | 45.0% | |
| ! | AGCTCGAAGCATCATTCTTG+GGG | + | chr3.1:38165122-38165141 | MS.gene82704:CDS | 45.0% |
| ! | ATAGGGTCTTTTGTAGGTGC+TGG | + | chr3.1:38166467-38166486 | MS.gene82704:CDS | 45.0% |
| ! | ATCTTGGTCTTCAATGGCTG+TGG | + | chr3.1:38163980-38163999 | MS.gene82704:CDS | 45.0% |
| ! | CTCCAGAATCTTCGATTTGC+TGG | - | chr3.1:38164297-38164316 | None:intergenic | 45.0% |
| ! | GAGAGCACACTTCAGATTGA+TGG | + | chr3.1:38164529-38164548 | MS.gene82704:intron | 45.0% |
| ! | GCGTCATATGCTTTAGGTGA+CGG | - | chr3.1:38165201-38165220 | None:intergenic | 45.0% |
| ! | GGAATATGCGGGAGTTTGTT+AGG | + | chr3.1:38164005-38164024 | MS.gene82704:CDS | 45.0% |
| ! | GGTCCGTAGTATTGAGAGAT+TGG | - | chr3.1:38163412-38163431 | None:intergenic | 45.0% |
| ! | GGTTGGTTAGGACTTATGCT+CGG | + | chr3.1:38165160-38165179 | MS.gene82704:CDS | 45.0% |
| ! | GTACCCAGATGTGTTGATGT+CGG | - | chr3.1:38164567-38164586 | None:intergenic | 45.0% |
| ! | TCTTGGTCTTCAATGGCTGT+GGG | + | chr3.1:38163981-38164000 | MS.gene82704:CDS | 45.0% |
| !! | AAGAGCACCATAACCCTATC+TGG | - | chr3.1:38165400-38165419 | None:intergenic | 45.0% |
| !! | ATATGCGGGAGTTTGTTAGG+GGG | + | chr3.1:38164008-38164027 | MS.gene82704:CDS | 45.0% |
| !! | GATGCACCTGTTGCTTCTTT+TGG | - | chr3.1:38166602-38166621 | None:intergenic | 45.0% |
| !!! | ATATATCAATTTTATTTTAA+AGG | - | chr3.1:38165760-38165779 | None:intergenic | 5.0% |
| !!! | TAAAATTGATATATATTTTA+TGG | + | chr3.1:38165766-38165785 | MS.gene82704:intron | 5.0% |
| !!! | TATATCAATTTTATTTTAAA+GGG | - | chr3.1:38165759-38165778 | None:intergenic | 5.0% |
| !!! | TTTGTTTATATTTTTATTTA+TGG | + | chr3.1:38164934-38164953 | MS.gene82704:intron | 5.0% |
| AAGCATGTGCATGGTACGAG+AGG | + | chr3.1:38165503-38165522 | MS.gene82704:intron | 50.0% | |
| ACATTCCCTTCGACCTTCAC+TGG | - | chr3.1:38163433-38163452 | None:intergenic | 50.0% | |
| ATGGCTGTGGGAGGAATATG+CGG | + | chr3.1:38163993-38164012 | MS.gene82704:CDS | 50.0% | |
| CAGGTATGCTCATGTTGCGT+TGG | + | chr3.1:38165315-38165334 | MS.gene82704:intron | 50.0% | |
| CTATGCCCTCCAGGAATTGA+AGG | + | chr3.1:38166398-38166417 | MS.gene82704:CDS | 50.0% | |
| GGTTATGGTGCTCTTTGGCT+CGG | + | chr3.1:38165405-38165424 | MS.gene82704:CDS | 50.0% | |
| TGCAGATTGCCGTTGTGTCT+AGG | + | chr3.1:38165353-38165372 | MS.gene82704:CDS | 50.0% | |
| TGGAGGACAGACCTATGTCT+TGG | + | chr3.1:38165029-38165048 | MS.gene82704:intron | 50.0% | |
| TGGGAACAGTAATGTGGGCA+AGG | - | chr3.1:38165060-38165079 | None:intergenic | 50.0% | |
| TTGGTCAGGGCCAAATTTGC+AGG | + | chr3.1:38163942-38163961 | MS.gene82704:intron | 50.0% | |
| ! | CGAAGCATCATTCTTGGGGA+CGG | + | chr3.1:38165126-38165145 | MS.gene82704:CDS | 50.0% |
| ! | CGCCTTTGGTGTACCAGATA+GGG | + | chr3.1:38165384-38165403 | MS.gene82704:CDS | 50.0% |
| ! | GTACGCGTTGTTGGTTGGTT+AGG | + | chr3.1:38165148-38165167 | MS.gene82704:CDS | 50.0% |
| ! | TCGCCTTTGGTGTACCAGAT+AGG | + | chr3.1:38165383-38165402 | MS.gene82704:CDS | 50.0% |
| !! | TTTGGCTCGGCACTTGTTGA+TGG | + | chr3.1:38165418-38165437 | MS.gene82704:CDS | 50.0% |
| !!! | GTCTTTTGTAGGTGCTGGCT+TGG | + | chr3.1:38166472-38166491 | MS.gene82704:CDS | 50.0% |
| ACGGACCAGTGAAGGTCGAA+GGG | + | chr3.1:38163425-38163444 | MS.gene82704:intron | 55.0% | |
| CTGTGCTCTCCCTTGTACCA+TGG | + | chr3.1:38163164-38163183 | MS.gene82704:CDS | 55.0% | |
| TACGGACCAGTGAAGGTCGA+AGG | + | chr3.1:38163424-38163443 | MS.gene82704:intron | 55.0% | |
| TCTGGACAACTATGCCCTCC+AGG | + | chr3.1:38166389-38166408 | MS.gene82704:CDS | 55.0% | |
| TGGCTGTGGGAGGAATATGC+GGG | + | chr3.1:38163994-38164013 | MS.gene82704:CDS | 55.0% | |
| TGGTCTTCAATGGCTGTGGG+AGG | + | chr3.1:38163984-38164003 | MS.gene82704:CDS | 55.0% | |
| GGACGGTACGCGTTGTTGGT+TGG | + | chr3.1:38165143-38165162 | MS.gene82704:CDS | 60.0% | |
| TTGGGGACGGTACGCGTTGT+TGG | + | chr3.1:38165139-38165158 | MS.gene82704:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 38162863 | 38166628 | 38162863 | ID=MS.gene82704 |
| chr3.1 | mRNA | 38162863 | 38166628 | 38162863 | ID=MS.gene82704.t1;Parent=MS.gene82704 |
| chr3.1 | exon | 38162863 | 38162891 | 38162863 | ID=MS.gene82704.t1.exon1;Parent=MS.gene82704.t1 |
| chr3.1 | CDS | 38162863 | 38162891 | 38162863 | ID=cds.MS.gene82704.t1;Parent=MS.gene82704.t1 |
| chr3.1 | exon | 38163102 | 38163323 | 38163102 | ID=MS.gene82704.t1.exon2;Parent=MS.gene82704.t1 |
| chr3.1 | CDS | 38163102 | 38163323 | 38163102 | ID=cds.MS.gene82704.t1;Parent=MS.gene82704.t1 |
| chr3.1 | exon | 38163950 | 38164408 | 38163950 | ID=MS.gene82704.t1.exon3;Parent=MS.gene82704.t1 |
| chr3.1 | CDS | 38163950 | 38164408 | 38163950 | ID=cds.MS.gene82704.t1;Parent=MS.gene82704.t1 |
| chr3.1 | exon | 38165039 | 38165236 | 38165039 | ID=MS.gene82704.t1.exon4;Parent=MS.gene82704.t1 |
| chr3.1 | CDS | 38165039 | 38165236 | 38165039 | ID=cds.MS.gene82704.t1;Parent=MS.gene82704.t1 |
| chr3.1 | exon | 38165318 | 38165455 | 38165318 | ID=MS.gene82704.t1.exon5;Parent=MS.gene82704.t1 |
| chr3.1 | CDS | 38165318 | 38165455 | 38165318 | ID=cds.MS.gene82704.t1;Parent=MS.gene82704.t1 |
| chr3.1 | exon | 38166367 | 38166628 | 38166367 | ID=MS.gene82704.t1.exon6;Parent=MS.gene82704.t1 |
| chr3.1 | CDS | 38166367 | 38166628 | 38166367 | ID=cds.MS.gene82704.t1;Parent=MS.gene82704.t1 |
| Gene Sequence |
| Protein sequence |
