Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82793.t1 | XP_003616287.1 | 54.1 | 458 | 160 | 6 | 1 | 410 | 1 | 456 | 9.50E-134 | 487.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82793.t1 | G7K1P7 | 54.1 | 458 | 160 | 6 | 1 | 410 | 1 | 456 | 6.8e-134 | 487.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049531 | MS.gene82793 | 0.802633 | 5.11E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene82793 | 0.811152 | 8.08E-51 | -1.69E-46 |
| MS.gene050029 | MS.gene82793 | 0.815326 | 9.79E-52 | -1.69E-46 |
| MS.gene050273 | MS.gene82793 | 0.803594 | 3.24E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene82793 | 0.800719 | 1.26E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene82793 | 0.814511 | 1.48E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene82793 | 0.802461 | 5.55E-49 | -1.69E-46 |
| MS.gene052447 | MS.gene82793 | 0.811212 | 7.84E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene82793 | 0.813135 | 2.98E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene82793 | 0.81689 | 4.38E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene82793 | 0.819238 | 1.29E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene82793 | 0.823208 | 1.57E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene82793 | 0.805081 | 1.59E-49 | -1.69E-46 |
| MS.gene055058 | MS.gene82793 | 0.822991 | 1.76E-53 | -1.69E-46 |
| MS.gene055228 | MS.gene82793 | 0.834205 | 3.43E-56 | -1.69E-46 |
| MS.gene05531 | MS.gene82793 | 0.806357 | 8.56E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene82793 | 0.803601 | 3.23E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene82793 | 0.811927 | 5.48E-51 | -1.69E-46 |
| MS.gene056252 | MS.gene82793 | 0.8044 | 2.20E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene82793 | 0.812283 | 4.58E-51 | -1.69E-46 |
| MS.gene058515 | MS.gene82793 | 0.830905 | 2.26E-55 | -1.69E-46 |
| MS.gene058625 | MS.gene82793 | 0.802134 | 6.48E-49 | -1.69E-46 |
| MS.gene059276 | MS.gene82793 | 0.803744 | 3.01E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene82793 | 0.812905 | 3.35E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene82793 | 0.811511 | 6.75E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82793.t1 | MTR_5g078250 | 52.391 | 481 | 178 | 7 | 1 | 432 | 1 | 479 | 3.26e-170 | 492 |
| MS.gene82793.t1 | MTR_8g062030 | 53.364 | 431 | 159 | 3 | 1 | 389 | 1 | 431 | 2.82e-154 | 453 |
| MS.gene82793.t1 | MTR_1g075850 | 44.269 | 506 | 178 | 9 | 1 | 461 | 1 | 447 | 1.59e-136 | 406 |
| MS.gene82793.t1 | MTR_4g046077 | 46.053 | 380 | 134 | 8 | 103 | 453 | 1 | 338 | 1.73e-91 | 286 |
| MS.gene82793.t1 | MTR_4g036240 | 34.571 | 431 | 232 | 7 | 1 | 386 | 1 | 426 | 2.82e-77 | 254 |
| MS.gene82793.t1 | MTR_2g048560 | 33.038 | 451 | 256 | 6 | 1 | 406 | 1 | 450 | 4.43e-77 | 253 |
| MS.gene82793.t1 | MTR_6g051890 | 42.727 | 330 | 120 | 6 | 1 | 319 | 5 | 276 | 5.12e-77 | 248 |
| MS.gene82793.t1 | MTR_0042s0170 | 39.216 | 459 | 165 | 14 | 103 | 523 | 1 | 383 | 2.13e-74 | 241 |
| MS.gene82793.t1 | MTR_6g052340 | 53.846 | 247 | 71 | 6 | 1 | 210 | 1 | 241 | 9.12e-73 | 244 |
| MS.gene82793.t1 | MTR_8g059025 | 69.565 | 138 | 42 | 0 | 1 | 138 | 1 | 138 | 3.88e-67 | 213 |
| MS.gene82793.t1 | MTR_8g479260 | 30.024 | 423 | 252 | 5 | 8 | 386 | 10 | 432 | 4.08e-65 | 221 |
| MS.gene82793.t1 | MTR_2g008650 | 30.024 | 423 | 252 | 5 | 8 | 386 | 10 | 432 | 8.52e-65 | 221 |
| MS.gene82793.t1 | MTR_3g056270 | 34.074 | 405 | 215 | 8 | 29 | 386 | 186 | 585 | 8.50e-63 | 219 |
| MS.gene82793.t1 | MTR_3g056270 | 37.255 | 204 | 112 | 2 | 1 | 189 | 1 | 203 | 1.32e-35 | 142 |
| MS.gene82793.t1 | MTR_8g467450 | 64.029 | 139 | 50 | 0 | 1 | 139 | 1 | 139 | 8.91e-59 | 192 |
| MS.gene82793.t1 | MTR_4g036240 | 33.618 | 351 | 183 | 7 | 81 | 386 | 1 | 346 | 5.25e-54 | 190 |
| MS.gene82793.t1 | MTR_3g081610 | 51.412 | 177 | 67 | 4 | 210 | 386 | 10 | 167 | 4.02e-51 | 174 |
| MS.gene82793.t1 | MTR_1g094230 | 33.677 | 291 | 168 | 5 | 1 | 266 | 1 | 291 | 1.31e-43 | 157 |
| MS.gene82793.t1 | MTR_8g463820 | 35.075 | 268 | 155 | 4 | 1 | 249 | 1 | 268 | 6.34e-43 | 155 |
| MS.gene82793.t1 | MTR_6g039240 | 33.564 | 289 | 167 | 5 | 1 | 264 | 1 | 289 | 1.41e-42 | 154 |
| MS.gene82793.t1 | MTR_8g062060 | 27.619 | 420 | 249 | 7 | 13 | 386 | 13 | 423 | 1.47e-41 | 157 |
| MS.gene82793.t1 | MTR_7g089660 | 37.727 | 220 | 129 | 4 | 1 | 218 | 1 | 214 | 7.65e-40 | 145 |
| MS.gene82793.t1 | MTR_2g048550 | 27.335 | 439 | 256 | 9 | 1 | 386 | 1 | 429 | 2.30e-39 | 150 |
| MS.gene82793.t1 | MTR_4g036240 | 32.292 | 288 | 145 | 7 | 144 | 386 | 1 | 283 | 5.57e-39 | 147 |
| MS.gene82793.t1 | MTR_3g056240 | 37.073 | 205 | 113 | 2 | 1 | 190 | 1 | 204 | 1.10e-37 | 141 |
| MS.gene82793.t1 | MTR_4g134870 | 45.517 | 145 | 75 | 1 | 210 | 350 | 117 | 261 | 1.54e-36 | 141 |
| MS.gene82793.t1 | MTR_8g088810 | 30.464 | 302 | 171 | 3 | 1 | 263 | 1 | 302 | 1.21e-35 | 135 |
| MS.gene82793.t1 | MTR_5g055160 | 32.540 | 252 | 144 | 2 | 1 | 252 | 1 | 226 | 6.40e-35 | 132 |
| MS.gene82793.t1 | MTR_8g469510 | 63.218 | 87 | 32 | 0 | 20 | 106 | 3 | 89 | 2.02e-33 | 122 |
| MS.gene82793.t1 | MTR_2g054710 | 34.225 | 187 | 108 | 1 | 8 | 179 | 10 | 196 | 2.62e-33 | 128 |
| MS.gene82793.t1 | MTR_3g095950 | 39.873 | 158 | 95 | 0 | 1 | 158 | 1 | 158 | 3.19e-33 | 125 |
| MS.gene82793.t1 | MTR_1g036740 | 40.506 | 158 | 94 | 0 | 1 | 158 | 1 | 158 | 3.67e-33 | 124 |
| MS.gene82793.t1 | MTR_8g096680 | 40.506 | 158 | 94 | 0 | 1 | 158 | 1 | 158 | 3.67e-33 | 124 |
| MS.gene82793.t1 | MTR_1g105785 | 23.556 | 450 | 283 | 12 | 11 | 414 | 11 | 445 | 7.67e-33 | 132 |
| MS.gene82793.t1 | MTR_4g471610 | 39.873 | 158 | 95 | 0 | 1 | 158 | 1 | 158 | 8.29e-33 | 124 |
| MS.gene82793.t1 | MTR_3g078440 | 39.873 | 158 | 95 | 0 | 1 | 158 | 1 | 158 | 8.29e-33 | 124 |
| MS.gene82793.t1 | MTR_8g036090 | 39.873 | 158 | 95 | 0 | 1 | 158 | 1 | 158 | 8.29e-33 | 124 |
| MS.gene82793.t1 | MTR_2g062200 | 40.884 | 181 | 83 | 4 | 44 | 201 | 1 | 180 | 1.09e-32 | 124 |
| MS.gene82793.t1 | MTR_6g069230 | 34.821 | 224 | 117 | 2 | 14 | 208 | 110 | 333 | 1.14e-32 | 128 |
| MS.gene82793.t1 | MTR_3g116750 | 41.060 | 151 | 89 | 0 | 8 | 158 | 8 | 158 | 6.77e-32 | 121 |
| MS.gene82793.t1 | MTR_5g070620 | 67.532 | 77 | 25 | 0 | 2 | 78 | 27 | 103 | 2.05e-31 | 117 |
| MS.gene82793.t1 | MTR_7g093810 | 40.397 | 151 | 90 | 0 | 8 | 158 | 8 | 158 | 4.78e-31 | 119 |
| MS.gene82793.t1 | MTR_1g050500 | 27.654 | 358 | 211 | 10 | 78 | 396 | 2 | 350 | 9.39e-31 | 126 |
| MS.gene82793.t1 | MTR_7g110100 | 23.990 | 421 | 273 | 7 | 11 | 386 | 11 | 429 | 2.84e-30 | 124 |
| MS.gene82793.t1 | MTR_3g044760 | 29.236 | 301 | 177 | 5 | 1 | 271 | 1 | 295 | 7.79e-30 | 122 |
| MS.gene82793.t1 | MTR_4g028320 | 43.066 | 137 | 78 | 0 | 22 | 158 | 3 | 139 | 1.58e-29 | 114 |
| MS.gene82793.t1 | MTR_5g085220 | 37.975 | 158 | 98 | 0 | 1 | 158 | 1 | 158 | 4.09e-29 | 113 |
| MS.gene82793.t1 | MTR_6g445520 | 27.119 | 295 | 164 | 4 | 142 | 386 | 1 | 294 | 4.41e-29 | 120 |
| MS.gene82793.t1 | MTR_7g051400 | 23.419 | 427 | 290 | 11 | 11 | 414 | 11 | 423 | 8.06e-29 | 120 |
| MS.gene82793.t1 | MTR_6g013455 | 30.827 | 266 | 152 | 6 | 1 | 249 | 1 | 251 | 2.11e-27 | 111 |
| MS.gene82793.t1 | MTR_5g056060 | 30.830 | 253 | 144 | 4 | 1 | 252 | 1 | 223 | 9.13e-27 | 109 |
| MS.gene82793.t1 | MTR_7g104000 | 29.779 | 272 | 153 | 6 | 1 | 264 | 1 | 242 | 1.92e-25 | 105 |
| MS.gene82793.t1 | MTR_5g007120 | 32.727 | 220 | 123 | 2 | 50 | 268 | 19 | 214 | 1.07e-24 | 102 |
| MS.gene82793.t1 | MTR_6g033945 | 40.909 | 132 | 54 | 3 | 154 | 269 | 101 | 224 | 2.31e-24 | 102 |
| MS.gene82793.t1 | MTR_2g058350 | 31.047 | 277 | 152 | 5 | 14 | 289 | 14 | 252 | 8.46e-24 | 103 |
| MS.gene82793.t1 | MTR_2g032570 | 37.908 | 153 | 93 | 1 | 8 | 158 | 8 | 160 | 1.35e-23 | 98.2 |
| MS.gene82793.t1 | MTR_6g465570 | 35.616 | 146 | 93 | 1 | 14 | 159 | 10 | 154 | 2.91e-23 | 97.1 |
| MS.gene82793.t1 | MTR_4g016120 | 42.727 | 110 | 63 | 0 | 49 | 158 | 40 | 149 | 8.93e-23 | 95.5 |
| MS.gene82793.t1 | MTR_3g084550 | 41.880 | 117 | 68 | 0 | 42 | 158 | 1 | 117 | 1.70e-22 | 93.6 |
| MS.gene82793.t1 | MTR_1g072220 | 41.026 | 117 | 69 | 0 | 42 | 158 | 1 | 117 | 2.21e-22 | 93.2 |
| MS.gene82793.t1 | MTR_1788s0010 | 36.923 | 130 | 82 | 0 | 10 | 139 | 10 | 139 | 8.36e-21 | 89.0 |
| MS.gene82793.t1 | MTR_7g117425 | 45.946 | 111 | 54 | 1 | 6 | 116 | 6 | 110 | 1.19e-20 | 92.0 |
| MS.gene82793.t1 | MTR_2g099880 | 42.735 | 117 | 67 | 0 | 42 | 158 | 7 | 123 | 2.33e-20 | 87.8 |
| MS.gene82793.t1 | MTR_5g068430 | 31.928 | 166 | 106 | 1 | 1 | 166 | 1 | 159 | 2.76e-20 | 89.4 |
| MS.gene82793.t1 | MTR_7g032985 | 62.295 | 61 | 23 | 0 | 100 | 160 | 1 | 61 | 3.68e-20 | 85.1 |
| MS.gene82793.t1 | MTR_8g461360 | 38.849 | 139 | 69 | 2 | 58 | 181 | 1 | 138 | 3.72e-20 | 89.7 |
| MS.gene82793.t1 | MTR_6g051880 | 27.928 | 222 | 130 | 4 | 70 | 274 | 2 | 210 | 1.87e-19 | 91.3 |
| MS.gene82793.t1 | MTR_4g022520 | 41.667 | 108 | 63 | 0 | 51 | 158 | 11 | 118 | 3.70e-19 | 86.3 |
| MS.gene82793.t1 | MTR_5g032920 | 43.750 | 96 | 54 | 0 | 1 | 96 | 1 | 96 | 8.80e-19 | 82.0 |
| MS.gene82793.t1 | MTR_1g060700 | 33.333 | 174 | 53 | 2 | 103 | 213 | 1 | 174 | 2.23e-18 | 88.6 |
| MS.gene82793.t1 | MTR_3g452170 | 22.500 | 320 | 206 | 6 | 11 | 293 | 11 | 325 | 4.69e-17 | 84.3 |
| MS.gene82793.t1 | MTR_7g451880 | 27.368 | 190 | 121 | 2 | 14 | 187 | 15 | 203 | 1.36e-16 | 81.6 |
| MS.gene82793.t1 | MTR_8g005940 | 26.087 | 230 | 159 | 4 | 14 | 238 | 14 | 237 | 3.77e-16 | 79.7 |
| MS.gene82793.t1 | MTR_4g058660 | 23.256 | 258 | 164 | 3 | 14 | 238 | 14 | 270 | 4.23e-16 | 80.1 |
| MS.gene82793.t1 | MTR_1g082860 | 25.789 | 190 | 115 | 2 | 14 | 187 | 14 | 193 | 7.20e-15 | 75.5 |
| MS.gene82793.t1 | MTR_7g045450 | 24.490 | 245 | 163 | 5 | 11 | 235 | 11 | 253 | 7.28e-15 | 75.1 |
| MS.gene82793.t1 | MTR_6g073570 | 24.490 | 245 | 163 | 5 | 11 | 235 | 11 | 253 | 7.28e-15 | 75.1 |
| MS.gene82793.t1 | MTR_1g091180 | 38.776 | 98 | 60 | 0 | 24 | 121 | 2 | 99 | 8.90e-15 | 71.2 |
| MS.gene82793.t1 | MTR_8g078450 | 34.014 | 147 | 87 | 2 | 75 | 212 | 2 | 147 | 1.25e-14 | 72.0 |
| MS.gene82793.t1 | MTR_1g011490 | 22.868 | 258 | 156 | 3 | 14 | 238 | 14 | 261 | 1.28e-14 | 75.5 |
| MS.gene82793.t1 | MTR_1g051235 | 30.282 | 142 | 87 | 1 | 11 | 140 | 11 | 152 | 1.50e-14 | 72.0 |
| MS.gene82793.t1 | MTR_5g030110 | 22.868 | 258 | 165 | 3 | 14 | 238 | 14 | 270 | 1.59e-14 | 75.1 |
| MS.gene82793.t1 | MTR_2g007410 | 22.868 | 258 | 165 | 3 | 14 | 238 | 14 | 270 | 1.59e-14 | 75.1 |
| MS.gene82793.t1 | MTR_7g024060 | 22.868 | 258 | 165 | 3 | 14 | 238 | 14 | 270 | 1.96e-14 | 75.1 |
| MS.gene82793.t1 | MTR_6g087820 | 22.868 | 258 | 165 | 3 | 14 | 238 | 14 | 270 | 1.96e-14 | 75.1 |
| MS.gene82793.t1 | MTR_5g081190 | 22.868 | 258 | 165 | 3 | 14 | 238 | 14 | 270 | 1.96e-14 | 75.1 |
| MS.gene82793.t1 | MTR_5g091480 | 22.868 | 258 | 165 | 3 | 14 | 238 | 14 | 270 | 1.96e-14 | 75.1 |
| MS.gene82793.t1 | MTR_5g056290 | 22.868 | 258 | 165 | 3 | 14 | 238 | 14 | 270 | 1.96e-14 | 75.1 |
| MS.gene82793.t1 | MTR_3g031190 | 22.868 | 258 | 165 | 3 | 14 | 238 | 14 | 270 | 1.96e-14 | 75.1 |
| MS.gene82793.t1 | MTR_2g005490 | 22.868 | 258 | 165 | 3 | 14 | 238 | 14 | 270 | 1.96e-14 | 75.1 |
| MS.gene82793.t1 | MTR_2g010570 | 22.868 | 258 | 165 | 3 | 14 | 238 | 14 | 270 | 1.96e-14 | 75.1 |
| MS.gene82793.t1 | MTR_5g060920 | 43.038 | 79 | 45 | 0 | 6 | 84 | 8 | 86 | 2.16e-14 | 69.7 |
| MS.gene82793.t1 | MTR_3g032190 | 41.667 | 84 | 49 | 0 | 1 | 84 | 1 | 84 | 2.39e-14 | 69.7 |
| MS.gene82793.t1 | MTR_7g074180 | 22.222 | 261 | 169 | 3 | 11 | 238 | 11 | 270 | 2.61e-14 | 74.7 |
| MS.gene82793.t1 | MTR_3g015660 | 25.263 | 190 | 125 | 2 | 14 | 187 | 14 | 202 | 3.55e-14 | 72.8 |
| MS.gene82793.t1 | MTR_4g071730 | 32.414 | 145 | 79 | 4 | 127 | 252 | 9 | 153 | 8.91e-14 | 69.3 |
| MS.gene82793.t1 | MTR_8g465040 | 30.201 | 149 | 103 | 1 | 11 | 159 | 11 | 158 | 8.95e-14 | 70.1 |
| MS.gene82793.t1 | MTR_1g023370 | 25.263 | 190 | 125 | 2 | 14 | 187 | 14 | 202 | 1.19e-13 | 72.4 |
| MS.gene82793.t1 | MTR_0032s0020 | 35.135 | 111 | 72 | 0 | 13 | 123 | 13 | 123 | 1.75e-13 | 73.6 |
| MS.gene82793.t1 | MTR_8g446640 | 22.800 | 250 | 159 | 3 | 22 | 238 | 3 | 251 | 2.59e-13 | 71.2 |
| MS.gene82793.t1 | MTR_4g040040 | 28.169 | 142 | 86 | 3 | 259 | 386 | 3 | 142 | 3.98e-13 | 68.2 |
| MS.gene82793.t1 | MTR_2g450060 | 19.807 | 414 | 267 | 11 | 1 | 358 | 5 | 409 | 6.78e-13 | 71.6 |
| MS.gene82793.t1 | MTR_1g096860 | 44.444 | 72 | 40 | 0 | 42 | 113 | 1 | 72 | 6.96e-13 | 64.3 |
| MS.gene82793.t1 | MTR_2g010270 | 22.093 | 258 | 160 | 4 | 22 | 238 | 3 | 260 | 9.16e-13 | 69.7 |
| MS.gene82793.t1 | MTR_5g054640 | 36.735 | 98 | 62 | 0 | 24 | 121 | 2 | 99 | 1.13e-12 | 65.9 |
| MS.gene82793.t1 | MTR_1g056650 | 43.056 | 72 | 41 | 0 | 42 | 113 | 1 | 72 | 3.26e-12 | 62.4 |
| MS.gene82793.t1 | MTR_0048s0080 | 22.481 | 258 | 161 | 8 | 137 | 359 | 2 | 255 | 6.24e-12 | 67.4 |
| MS.gene82793.t1 | MTR_5g045850 | 24.171 | 211 | 118 | 4 | 14 | 198 | 14 | 208 | 4.81e-11 | 64.3 |
| MS.gene82793.t1 | MTR_2g020010 | 29.487 | 156 | 87 | 3 | 7 | 155 | 45 | 184 | 8.08e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82793.t1 | AT1G52950 | 22.539 | 386 | 229 | 11 | 10 | 336 | 12 | 386 | 4.34e-24 | 106 |
| MS.gene82793.t1 | AT2G05642 | 21.648 | 522 | 308 | 14 | 19 | 467 | 19 | 512 | 1.04e-21 | 99.0 |
Find 155 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCGCTGATTATGATTATT+TGG | 0.171120 | 6.1:-452268 | MS.gene82793:CDS |
| ATTTGAAATATCAGCTTATA+TGG | 0.194564 | 6.1:+452375 | None:intergenic |
| TTATGAACACGACTAGAATT+TGG | 0.216990 | 6.1:-451759 | MS.gene82793:CDS |
| GGGAAGGATGATGTTGTTTA+AGG | 0.226381 | 6.1:-450935 | MS.gene82793:CDS |
| AATGTGCAGTTTGTGTTTGA+TGG | 0.268984 | 6.1:-450093 | MS.gene82793:intron |
| TCATGTTTGATGGATCTTAT+AGG | 0.299693 | 6.1:-450888 | MS.gene82793:CDS |
| AACTCAATCCAGATCAAGTT+TGG | 0.306008 | 6.1:+449587 | None:intergenic |
| CTTCGCTTGGTCCTCGCATT+AGG | 0.310386 | 6.1:-451528 | MS.gene82793:CDS |
| TAGTGATTTGGTAGAGGATC+TGG | 0.342831 | 6.1:-450687 | MS.gene82793:CDS |
| CTGTGCTGTTGTGGAAGGTT+TGG | 0.342880 | 6.1:-451416 | MS.gene82793:CDS |
| CAGTAATATGCACCAGAATC+AGG | 0.344639 | 6.1:+451340 | None:intergenic |
| TTTCAGAAGAAGTTGGTAGA+AGG | 0.346459 | 6.1:-452465 | MS.gene82793:CDS |
| CGGTGTGGGCGCAAACTTCT+TGG | 0.348141 | 6.1:+452286 | None:intergenic |
| CAAACTTCTTGGATCTTAAT+CGG | 0.352336 | 6.1:+452297 | None:intergenic |
| GGAAGCTGGGGAAGGATTGC+CGG | 0.355817 | 6.1:-451919 | MS.gene82793:CDS |
| GTTGTGGAAGGTTTGGTTGA+GGG | 0.360112 | 6.1:-451409 | MS.gene82793:CDS |
| CAGAATTCCTCAACAATAGA+TGG | 0.369411 | 6.1:+450844 | None:intergenic |
| CATGTTTGATGGATCTTATA+GGG | 0.370520 | 6.1:-450887 | MS.gene82793:CDS |
| CAGCCGAGAGAGAGTACGTT+AGG | 0.370627 | 6.1:-452135 | MS.gene82793:CDS |
| GGATGCTGAGTTGAGTGAAT+TGG | 0.378551 | 6.1:-450067 | MS.gene82793:CDS |
| AGGAGTGTTACTCCTGATTC+TGG | 0.380403 | 6.1:-451352 | MS.gene82793:CDS |
| AATTATGTGTTGTAGGTATA+AGG | 0.382305 | 6.1:-451214 | MS.gene82793:intron |
| CAAGGCTCCCAAACTTGATC+TGG | 0.387928 | 6.1:-449595 | MS.gene82793:CDS |
| AGCCTGATCAGGTTTCAAAA+AGG | 0.390572 | 6.1:+452701 | None:intergenic |
| GATGTTGTTGGTTTGATGAC+TGG | 0.398535 | 6.1:-452163 | MS.gene82793:CDS |
| ATACAACAATTGCCTTCTAA+TGG | 0.399641 | 6.1:+452491 | None:intergenic |
| CAGATCAAGTTTGGGAGCCT+TGG | 0.400511 | 6.1:+449596 | None:intergenic |
| GCAGTGTTTGTGATGTTTGA+TGG | 0.403092 | 6.1:-451159 | MS.gene82793:CDS |
| TGTTTGTGTGATATTGTTCC+TGG | 0.404785 | 6.1:-452777 | MS.gene82793:CDS |
| AAATACTGCTCCAGTTCTTA+AGG | 0.409409 | 6.1:-449944 | MS.gene82793:intron |
| CAAAATGTTACCTTAAGAAC+TGG | 0.411162 | 6.1:+449934 | None:intergenic |
| GCAAATTGAACCACAACAAC+CGG | 0.411747 | 6.1:+451900 | None:intergenic |
| TTGTGGAAGGTTTGGTTGAG+GGG | 0.411929 | 6.1:-451408 | MS.gene82793:CDS |
| TATGAACACGACTAGAATTT+GGG | 0.418474 | 6.1:-451758 | MS.gene82793:CDS |
| GGGTTCTGAGGTTAGTGATT+TGG | 0.419541 | 6.1:-450699 | MS.gene82793:CDS |
| AAGGTTGACTGTGCGTTGTT+TGG | 0.429232 | 6.1:-451975 | MS.gene82793:CDS |
| TCAACAGAGTTAGCCTGATC+AGG | 0.429762 | 6.1:+452690 | None:intergenic |
| CGCAAGGCATTTGACGCAGT+TGG | 0.430086 | 6.1:-449648 | MS.gene82793:CDS |
| TAATTCTGTGTAGATGTTGT+TGG | 0.433961 | 6.1:-452175 | MS.gene82793:intron |
| CTCTGTTAGGCTGAAAATGC+TGG | 0.435251 | 6.1:-450988 | MS.gene82793:intron |
| TCTAGTGTTGTTCCTTCGCT+TGG | 0.436276 | 6.1:-451541 | MS.gene82793:CDS |
| TTTGCAGTTGCCCCTGGTGT+TGG | 0.441612 | 6.1:-452420 | MS.gene82793:CDS |
| GATCGTGTGTCTGATACATC+TGG | 0.444913 | 6.1:-449973 | MS.gene82793:CDS |
| CTACTGCTGCTGAGAAGAAT+GGG | 0.445703 | 6.1:-449698 | MS.gene82793:CDS |
| TCTTGAGATTGTTAGTTTGA+AGG | 0.445928 | 6.1:-450956 | MS.gene82793:CDS |
| CAGACCCTAGCTGTGGATCC+TGG | 0.446283 | 6.1:-449783 | MS.gene82793:CDS |
| CAGAAGAAGTTGGTAGAAGG+AGG | 0.447420 | 6.1:-452462 | MS.gene82793:CDS |
| TGTGTCTCCTCAACAACCTC+TGG | 0.450330 | 6.1:+450036 | None:intergenic |
| GATGCTGAGTTGAGTGAATT+GGG | 0.450630 | 6.1:-450066 | MS.gene82793:CDS |
| GTCGAGAAGACTGCATCTGC+AGG | 0.453268 | 6.1:-450913 | MS.gene82793:CDS |
| AGCGAAGGAACAACACTAGA+AGG | 0.454161 | 6.1:+451544 | None:intergenic |
| GCTACTGCTGCTGAGAAGAA+TGG | 0.456853 | 6.1:-449699 | MS.gene82793:CDS |
| AGATTCATGCCACCATTAGA+AGG | 0.458064 | 6.1:-452503 | MS.gene82793:CDS |
| GCAGTAGCTCCTGACAGGTC+TGG | 0.460741 | 6.1:+449714 | None:intergenic |
| TCTGCAGGGGTCATGTTTGA+TGG | 0.461394 | 6.1:-450898 | MS.gene82793:CDS |
| CTTGAGATTGTTAGTTTGAA+GGG | 0.462449 | 6.1:-450955 | MS.gene82793:CDS |
| ATGTTGTTGGTTTGATGACT+GGG | 0.464793 | 6.1:-452162 | MS.gene82793:CDS |
| AATATCACACAAACAATCAA+TGG | 0.466623 | 6.1:+452785 | None:intergenic |
| TGGATGTGAGGCTGTAAGTT+TGG | 0.469171 | 6.1:-449763 | MS.gene82793:CDS |
| ATCCTGCGCGTCGTTGTCAT+AGG | 0.469694 | 6.1:-451372 | MS.gene82793:CDS |
| AGAGTACGTTAGGGATGGAA+AGG | 0.475235 | 6.1:-452125 | MS.gene82793:intron |
| AATTTCACAGCCTCTTCAAA+AGG | 0.476523 | 6.1:+451727 | None:intergenic |
| TCATACTTTGCAGTTGCCCC+TGG | 0.477173 | 6.1:-452426 | MS.gene82793:CDS |
| CTCTGATGTTGTGGGTTCTG+AGG | 0.483251 | 6.1:-450711 | MS.gene82793:CDS |
| TGTGGAAGGTTTGGTTGAGG+GGG | 0.488124 | 6.1:-451407 | MS.gene82793:CDS |
| TGTTGTGGAAGGTTTGGTTG+AGG | 0.488730 | 6.1:-451410 | MS.gene82793:CDS |
| TGGATCTTATAGGGTGAAGA+GGG | 0.492867 | 6.1:-450878 | MS.gene82793:CDS |
| GTTGTCTGTGCTGTTGTGGA+AGG | 0.494419 | 6.1:-451421 | MS.gene82793:CDS |
| GCAGTTTGTGTTTGATGGTG+TGG | 0.495057 | 6.1:-450088 | MS.gene82793:intron |
| GGATCAAGGTGCGTGTGCTT+AGG | 0.496137 | 6.1:-452740 | MS.gene82793:CDS |
| GCTGATTATGATTATTTGGT+TGG | 0.504058 | 6.1:-452264 | MS.gene82793:intron |
| TGAGGTTAGTGATTTGGTAG+AGG | 0.506036 | 6.1:-450693 | MS.gene82793:CDS |
| ACTCAATCCAGATCAAGTTT+GGG | 0.509725 | 6.1:+449588 | None:intergenic |
| ATCCCTAACGTACTCTCTCT+CGG | 0.510892 | 6.1:+452132 | None:intergenic |
| TATCAGCTTATATGGATGAA+TGG | 0.512952 | 6.1:+452383 | None:intergenic |
| TGTTGAGGAGACACAAATTG+AGG | 0.516639 | 6.1:-450028 | MS.gene82793:CDS |
| AGATTGTTAGTTTGAAGGGA+AGG | 0.520786 | 6.1:-450951 | MS.gene82793:CDS |
| CATTAGGCCTTCGATTGAAG+AGG | 0.522179 | 6.1:-451512 | MS.gene82793:CDS |
| AATATCAGTGTTGCAATCCA+TGG | 0.525062 | 6.1:-451574 | MS.gene82793:intron |
| CAGCAGCAGTAGCTCCTGAC+AGG | 0.525221 | 6.1:+449709 | None:intergenic |
| TGATTCTCTCCAGAAGATGA+TGG | 0.528400 | 6.1:-451943 | MS.gene82793:CDS |
| CACTAGAAGGTTCAATGCCA+TGG | 0.529130 | 6.1:+451557 | None:intergenic |
| ATCCTCCATGACTCTCTACC+AGG | 0.529476 | 6.1:+452759 | None:intergenic |
| GTACGGTATGAGCCAACACC+AGG | 0.531748 | 6.1:+452408 | None:intergenic |
| TTTAAAAGTCCAGACCTGTC+AGG | 0.532245 | 6.1:-449723 | MS.gene82793:CDS |
| ATAAATATACACACCTTGGC+CGG | 0.532251 | 6.1:+450647 | None:intergenic |
| ATCGGAGAAAGTCCATGCAC+AGG | 0.532897 | 6.1:+452315 | None:intergenic |
| TTCACAGCCTCTTCAAAAGG+AGG | 0.533603 | 6.1:+451730 | None:intergenic |
| GGAAGGATTGCCGGTTGTTG+TGG | 0.534201 | 6.1:-451910 | MS.gene82793:intron |
| GATTCTCTCCAGAAGATGAT+GGG | 0.535338 | 6.1:-451942 | MS.gene82793:CDS |
| GACACAAATTGAGGATTTCG+TGG | 0.538543 | 6.1:-450019 | MS.gene82793:CDS |
| GTATCAGACACACGATCCAC+TGG | 0.539002 | 6.1:+449979 | None:intergenic |
| TTGAATGCCATTGTGGAGGA+TGG | 0.542450 | 6.1:-451451 | MS.gene82793:CDS |
| AAACTTACAGCCTCACATCC+AGG | 0.544375 | 6.1:+449765 | None:intergenic |
| GCTGTAAGTTTGGCGGATGA+TGG | 0.546225 | 6.1:-449753 | MS.gene82793:CDS |
| TTATGTTGTCTGTGCTGTTG+TGG | 0.548070 | 6.1:-451425 | MS.gene82793:CDS |
| AGCCGAGAGAGAGTACGTTA+GGG | 0.548790 | 6.1:-452134 | MS.gene82793:CDS |
| CACATCCAGGATCCACAGCT+AGG | 0.550757 | 6.1:+449778 | None:intergenic |
| TAGAGAGTCATGGAGGATCA+AGG | 0.553834 | 6.1:-452754 | MS.gene82793:CDS |
| TTCTGGTGCATATTACTGCA+AGG | 0.555168 | 6.1:-451335 | MS.gene82793:CDS |
| TCAGGCTAACTCTGTTGAGA+TGG | 0.555939 | 6.1:-452685 | MS.gene82793:CDS |
| CTCCTATGACAACGACGCGC+AGG | 0.556082 | 6.1:+451370 | None:intergenic |
| GGAATTCTGCACTTCTGTCA+AGG | 0.559554 | 6.1:-450830 | MS.gene82793:intron |
| ATGGATCTTATAGGGTGAAG+AGG | 0.564607 | 6.1:-450879 | MS.gene82793:CDS |
| GAGAGAGAGTACGTTAGGGA+TGG | 0.570784 | 6.1:-452130 | MS.gene82793:CDS |
| AAGAAATCCTCTTCAATCGA+AGG | 0.574744 | 6.1:+451505 | None:intergenic |
| TATATGGATGAATGGTAGTA+CGG | 0.578247 | 6.1:+452391 | None:intergenic |
| TTCAAACTAACAATCTCAAG+AGG | 0.580623 | 6.1:+450958 | None:intergenic |
| AATGAAGACAAAGGTGGAGA+GGG | 0.584507 | 6.1:-452355 | MS.gene82793:CDS |
| AGCTGTGGATCCTGGATGTG+AGG | 0.585040 | 6.1:-449775 | MS.gene82793:CDS |
| GGTGACATGCAACTGTTGCT+TGG | 0.586225 | 6.1:-451138 | MS.gene82793:CDS |
| TTGTTCCTGGTAGAGAGTCA+TGG | 0.586636 | 6.1:-452764 | MS.gene82793:CDS |
| TGAGGATCCAGAGGTTGTTG+AGG | 0.588057 | 6.1:-450043 | MS.gene82793:CDS |
| ATAATCATAATCAGCGGTGT+GGG | 0.589439 | 6.1:+452272 | None:intergenic |
| TGCTGAAGAGACACCGGCCA+AGG | 0.590160 | 6.1:-450660 | MS.gene82793:intron |
| TGAATGCCATTGTGGAGGAT+GGG | 0.592525 | 6.1:-451450 | MS.gene82793:CDS |
| GGTGCGTGTGCTTAGGATGT+GGG | 0.592953 | 6.1:-452733 | MS.gene82793:CDS |
| TGTTGATCCATCTATTGTTG+AGG | 0.594848 | 6.1:-450851 | MS.gene82793:CDS |
| TCGAGAAGACTGCATCTGCA+GGG | 0.595551 | 6.1:-450912 | MS.gene82793:CDS |
| CAACAATTGCCTTCTAATGG+TGG | 0.596619 | 6.1:+452494 | None:intergenic |
| AGGTGCGTGTGCTTAGGATG+TGG | 0.597101 | 6.1:-452734 | MS.gene82793:CDS |
| GAGGCTGTGAAATTTAGAGA+AGG | 0.598448 | 6.1:-451718 | MS.gene82793:CDS |
| AGGCTGTGAAATTTAGAGAA+GGG | 0.600321 | 6.1:-451717 | MS.gene82793:intron |
| ATGTGAGGCTGTAAGTTTGG+CGG | 0.600972 | 6.1:-449760 | MS.gene82793:CDS |
| ACATCCAGGATCCACAGCTA+GGG | 0.605603 | 6.1:+449779 | None:intergenic |
| AAATGAAGACAAAGGTGGAG+AGG | 0.612097 | 6.1:-452356 | MS.gene82793:CDS |
| AGTTCACTTATCCCTGTGCA+TGG | 0.617904 | 6.1:-452327 | MS.gene82793:CDS |
| TCTGGTGCATATTACTGCAA+GGG | 0.618450 | 6.1:-451334 | MS.gene82793:CDS |
| TAATGTTGTTGTTACTCCAG+TGG | 0.618704 | 6.1:-449995 | MS.gene82793:CDS |
| AATAATCATAATCAGCGGTG+TGG | 0.624084 | 6.1:+452271 | None:intergenic |
| AGCTAAGAGAAATTTGCGCA+AGG | 0.625659 | 6.1:-449664 | MS.gene82793:CDS |
| CGAGAAGACTGCATCTGCAG+GGG | 0.629581 | 6.1:-450911 | MS.gene82793:CDS |
| CTGGTGCATATTACTGCAAG+GGG | 0.631078 | 6.1:-451333 | MS.gene82793:intron |
| TCGGAGAAAGTCCATGCACA+GGG | 0.632550 | 6.1:+452316 | None:intergenic |
| ATTTCAAATGAAGACAAAGG+TGG | 0.632682 | 6.1:-452361 | MS.gene82793:CDS |
| GATATTTCAAATGAAGACAA+AGG | 0.634663 | 6.1:-452364 | MS.gene82793:CDS |
| ATTCTCTCCAGAAGATGATG+GGG | 0.636639 | 6.1:-451941 | MS.gene82793:CDS |
| CTATGAGTTGAATGCCATTG+TGG | 0.639853 | 6.1:-451458 | MS.gene82793:CDS |
| GGATGTTGCTGAAGAGACAC+CGG | 0.653195 | 6.1:-450666 | MS.gene82793:CDS |
| CTAATGCGAGGACCAAGCGA+AGG | 0.655277 | 6.1:+451529 | None:intergenic |
| ATCGTGTGTCTGATACATCT+GGG | 0.657391 | 6.1:-449972 | MS.gene82793:CDS |
| AACCAAATAATCATAATCAG+CGG | 0.658464 | 6.1:+452266 | None:intergenic |
| TTTGCAGCAGACCCTAGCTG+TGG | 0.668538 | 6.1:-449790 | MS.gene82793:intron |
| TGAGTTGAGTGAATTGGGTG+AGG | 0.670731 | 6.1:-450061 | MS.gene82793:CDS |
| ATAAATCCCATCCTCCACAA+TGG | 0.672201 | 6.1:+451444 | None:intergenic |
| TCAATCGAAGGCCTAATGCG+AGG | 0.683338 | 6.1:+451517 | None:intergenic |
| TGAATTGGGTGAGGATCCAG+AGG | 0.695337 | 6.1:-450052 | MS.gene82793:CDS |
| CACTACCACCAAGAAAACCA+AGG | 0.705071 | 6.1:-449613 | MS.gene82793:CDS |
| TACTGCTGCTGAGAAGAATG+GGG | 0.711790 | 6.1:-449697 | MS.gene82793:CDS |
| TACGGTATGAGCCAACACCA+GGG | 0.713804 | 6.1:+452409 | None:intergenic |
| TTCTCTCCAGAAGATGATGG+GGG | 0.715015 | 6.1:-451940 | MS.gene82793:CDS |
| GCGTGTGCTTAGGATGTGGG+AGG | 0.715566 | 6.1:-452730 | MS.gene82793:CDS |
| TGAGTTGAATGCCATTGTGG+AGG | 0.719334 | 6.1:-451455 | MS.gene82793:CDS |
| ACGGTATGAGCCAACACCAG+GGG | 0.725542 | 6.1:+452410 | None:intergenic |
| TTCCTGGTAGAGAGTCATGG+AGG | 0.748573 | 6.1:-452761 | MS.gene82793:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAATTTTAAAATTAAAAC+AGG | + | chr6.1:450184-450203 | None:intergenic | 10.0% |
| !!! | TATTATTCAAATATTTTGTA+TGG | - | chr6.1:451131-451150 | MS.gene82793:CDS | 10.0% |
| !! | GTGTATATTTATTCTATTAA+CGG | - | chr6.1:451749-451768 | MS.gene82793:CDS | 15.0% |
| !!! | ATCAATATATTTTTCAGAAA+AGG | + | chr6.1:452196-452215 | None:intergenic | 15.0% |
| !!! | GGTTTATATAAATTTAGAAT+AGG | - | chr6.1:452492-452511 | MS.gene82793:CDS | 15.0% |
| !!! | TATTTGCATTTTGTAATTTA+TGG | - | chr6.1:450557-450576 | MS.gene82793:intron | 15.0% |
| !!! | TTATATAAATTTAGAATAGG+AGG | - | chr6.1:452495-452514 | MS.gene82793:CDS | 15.0% |
| !! | AAATATTTGAATAATAGCGA+TGG | + | chr6.1:451127-451146 | None:intergenic | 20.0% |
| !! | AAGAATTTATGCAACAATTA+AGG | + | chr6.1:452572-452591 | None:intergenic | 20.0% |
| !! | AATATTTGAATAATAGCGAT+GGG | + | chr6.1:451126-451145 | None:intergenic | 20.0% |
| !! | ATTAACGGAAAATTTATGTT+AGG | - | chr6.1:451764-451783 | MS.gene82793:CDS | 20.0% |
| !! | ATTACAAAATGCAAATAAAC+AGG | + | chr6.1:450554-450573 | None:intergenic | 20.0% |
| !! | TATAAATTTCTCAATAGTAC+AGG | + | chr6.1:449794-449813 | None:intergenic | 20.0% |
| !! | TGAGAAAAAAAATATTGGTA+AGG | - | chr6.1:452141-452160 | MS.gene82793:CDS | 20.0% |
| !! | TTATTGTAATTATGTGTTGT+AGG | - | chr6.1:451164-451183 | MS.gene82793:CDS | 20.0% |
| !!! | AACTCATAGATATTTTTCTT+GGG | + | chr6.1:450916-450935 | None:intergenic | 20.0% |
| !!! | ACATTTTGCTTTTATAACTT+TGG | - | chr6.1:452466-452485 | MS.gene82793:CDS | 20.0% |
| !!! | AGCATTGAGAAAAAAAATAT+TGG | - | chr6.1:452136-452155 | MS.gene82793:CDS | 20.0% |
| !!! | ATTTGAAATATCAGCTTATA+TGG | + | chr6.1:450013-450032 | None:intergenic | 20.0% |
| !!! | GATTATTTATTTTGTCTATC+AGG | - | chr6.1:449747-449766 | MS.gene82793:CDS | 20.0% |
| !!! | GGTTTAATTTAATATAACCT+TGG | + | chr6.1:451105-451124 | None:intergenic | 20.0% |
| ! | AACCAAATAATCATAATCAG+CGG | + | chr6.1:450122-450141 | None:intergenic | 25.0% |
| ! | AATATCACACAAACAATCAA+TGG | + | chr6.1:449603-449622 | None:intergenic | 25.0% |
| ! | AATTATGTGTTGTAGGTATA+AGG | - | chr6.1:451171-451190 | MS.gene82793:CDS | 25.0% |
| ! | AGAAAAGGCTTCATAATTAA+TGG | + | chr6.1:452181-452200 | None:intergenic | 25.0% |
| ! | AGGTAGACATATTATATTAG+TGG | - | chr6.1:452515-452534 | MS.gene82793:intron | 25.0% |
| ! | CAAAAGAGTGAAACATTTAA+TGG | - | chr6.1:451898-451917 | MS.gene82793:intron | 25.0% |
| ! | GATATTTCAAATGAAGACAA+AGG | - | chr6.1:450021-450040 | MS.gene82793:CDS | 25.0% |
| ! | TAGAATAAATATACACACCT+TGG | + | chr6.1:451745-451764 | None:intergenic | 25.0% |
| ! | TGTTGCATTAACTAATTATG+TGG | - | chr6.1:452087-452106 | MS.gene82793:intron | 25.0% |
| ! | TTAGTTCACTTGCAATAAAT+TGG | - | chr6.1:451798-451817 | MS.gene82793:intron | 25.0% |
| ! | TTGCAAATAAAGACAAAAAC+CGG | + | chr6.1:451353-451372 | None:intergenic | 25.0% |
| !! | AAACTATATTAACCCTGTTT+TGG | - | chr6.1:450371-450390 | MS.gene82793:intron | 25.0% |
| !! | ACTCATAGATATTTTTCTTG+GGG | + | chr6.1:450915-450934 | None:intergenic | 25.0% |
| !! | ATAAATTGGACAGTTTCTTT+TGG | - | chr6.1:451812-451831 | MS.gene82793:intron | 25.0% |
| !! | CAACTCATAGATATTTTTCT+TGG | + | chr6.1:450917-450936 | None:intergenic | 25.0% |
| !! | GATACTTTGGTAACTTAAAA+AGG | + | chr6.1:452245-452264 | None:intergenic | 25.0% |
| !!! | TTGCTTTTATAACTTTGGTT+GGG | - | chr6.1:452471-452490 | MS.gene82793:CDS | 25.0% |
| !!! | TTTGCTTTTATAACTTTGGT+TGG | - | chr6.1:452470-452489 | MS.gene82793:CDS | 25.0% |
| AACTACAAATGGAAAGCAAT+CGG | + | chr6.1:451651-451670 | None:intergenic | 30.0% | |
| AATATAACCTTGGAACCATA+TGG | + | chr6.1:451095-451114 | None:intergenic | 30.0% | |
| AATGAGAAAAACACCAAAAC+AGG | + | chr6.1:450387-450406 | None:intergenic | 30.0% | |
| ACGGAAAATTTATGTTAGGT+AGG | - | chr6.1:451768-451787 | MS.gene82793:intron | 30.0% | |
| AGGACAGAAAATTTATACCT+CGG | + | chr6.1:450526-450545 | None:intergenic | 30.0% | |
| ATACAACAATTGCCTTCTAA+TGG | + | chr6.1:449897-449916 | None:intergenic | 30.0% | |
| ATGAGAAAAACACCAAAACA+GGG | + | chr6.1:450386-450405 | None:intergenic | 30.0% | |
| ATTTCAAATGAAGACAAAGG+TGG | - | chr6.1:450024-450043 | MS.gene82793:CDS | 30.0% | |
| CAAAATGTTACCTTAAGAAC+TGG | + | chr6.1:452454-452473 | None:intergenic | 30.0% | |
| CAAACTTCTTGGATCTTAAT+CGG | + | chr6.1:450091-450110 | None:intergenic | 30.0% | |
| CATCAGAGAAAAACTACAAA+TGG | + | chr6.1:451662-451681 | None:intergenic | 30.0% | |
| GAATCATCTATAACCAACTT+TGG | + | chr6.1:451302-451321 | None:intergenic | 30.0% | |
| GCGAAAATTAAAATATTCCG+AGG | - | chr6.1:450506-450525 | MS.gene82793:intron | 30.0% | |
| GCTGATTATGATTATTTGGT+TGG | - | chr6.1:450121-450140 | MS.gene82793:intron | 30.0% | |
| TAATTCTGTGTAGATGTTGT+TGG | - | chr6.1:450210-450229 | MS.gene82793:intron | 30.0% | |
| TATATGGATGAATGGTAGTA+CGG | + | chr6.1:449997-450016 | None:intergenic | 30.0% | |
| TATCAGCTTATATGGATGAA+TGG | + | chr6.1:450005-450024 | None:intergenic | 30.0% | |
| TATCTGTTTATATGCAGAGA+GGG | - | chr6.1:450588-450607 | MS.gene82793:intron | 30.0% | |
| TATGAACACGACTAGAATTT+GGG | - | chr6.1:450627-450646 | MS.gene82793:intron | 30.0% | |
| TGGTTAGTATATATGTGCTT+TGG | + | chr6.1:452043-452062 | None:intergenic | 30.0% | |
| TTATCTGTTTATATGCAGAG+AGG | - | chr6.1:450587-450606 | MS.gene82793:intron | 30.0% | |
| TTATGAACACGACTAGAATT+TGG | - | chr6.1:450626-450645 | MS.gene82793:intron | 30.0% | |
| TTCAAACTAACAATCTCAAG+AGG | + | chr6.1:451430-451449 | None:intergenic | 30.0% | |
| ! | CATGTTTGATGGATCTTATA+GGG | - | chr6.1:451498-451517 | MS.gene82793:CDS | 30.0% |
| ! | CTTGAGATTGTTAGTTTGAA+GGG | - | chr6.1:451430-451449 | MS.gene82793:CDS | 30.0% |
| ! | TAGTTTTTCTCTGATGTTGT+GGG | - | chr6.1:451666-451685 | MS.gene82793:intron | 30.0% |
| ! | TCATGTTTGATGGATCTTAT+AGG | - | chr6.1:451497-451516 | MS.gene82793:CDS | 30.0% |
| ! | TCTTGAGATTGTTAGTTTGA+AGG | - | chr6.1:451429-451448 | MS.gene82793:CDS | 30.0% |
| !! | GTATGTTTTTCAGAAGAAGT+TGG | - | chr6.1:449913-449932 | MS.gene82793:intron | 30.0% |
| !! | TTTGATGATGTATCTCTGTT+AGG | - | chr6.1:451384-451403 | MS.gene82793:CDS | 30.0% |
| !!! | TAACCACTGTTTTTATTTGC+TGG | - | chr6.1:452057-452076 | MS.gene82793:intron | 30.0% |
| !!! | TGTTTTGGTGTTTTTCTCAT+TGG | - | chr6.1:450386-450405 | MS.gene82793:intron | 30.0% |
| !!! | TTTTTTCTGTTGTGTGACTT+TGG | - | chr6.1:450720-450739 | MS.gene82793:intron | 30.0% |
| AAAACCCATGAATTGTTTGC+AGG | - | chr6.1:451988-452007 | MS.gene82793:intron | 35.0% | |
| AAATACTGCTCCAGTTCTTA+AGG | - | chr6.1:452441-452460 | MS.gene82793:CDS | 35.0% | |
| AACAATTAAGGTCTACAGAG+AGG | + | chr6.1:452560-452579 | None:intergenic | 35.0% | |
| AAGAAATCCTCTTCAATCGA+AGG | + | chr6.1:450883-450902 | None:intergenic | 35.0% | |
| AATAATCATAATCAGCGGTG+TGG | + | chr6.1:450117-450136 | None:intergenic | 35.0% | |
| AATATCAGTGTTGCAATCCA+TGG | - | chr6.1:450811-450830 | MS.gene82793:intron | 35.0% | |
| AATGTGCAGTTTGTGTTTGA+TGG | - | chr6.1:452292-452311 | MS.gene82793:CDS | 35.0% | |
| AATTTCACAGCCTCTTCAAA+AGG | + | chr6.1:450661-450680 | None:intergenic | 35.0% | |
| AGGCTGTGAAATTTAGAGAA+GGG | - | chr6.1:450668-450687 | MS.gene82793:CDS | 35.0% | |
| AGGTATTAGAATCATGCTGA+GGG | - | chr6.1:451847-451866 | MS.gene82793:intron | 35.0% | |
| ATAAATATACACACCTTGGC+CGG | + | chr6.1:451741-451760 | None:intergenic | 35.0% | |
| ATAATCATAATCAGCGGTGT+GGG | + | chr6.1:450116-450135 | None:intergenic | 35.0% | |
| ATGCAAATAAACAGGCAAAC+AGG | + | chr6.1:450546-450565 | None:intergenic | 35.0% | |
| CAGAATTCCTCAACAATAGA+TGG | + | chr6.1:451544-451563 | None:intergenic | 35.0% | |
| GATCAGGTTTCAAAAAGGTT+GGG | + | chr6.1:449682-449701 | None:intergenic | 35.0% | |
| TAGGTATTAGAATCATGCTG+AGG | - | chr6.1:451846-451865 | MS.gene82793:intron | 35.0% | |
| TATTGTTGTGGTTTCTTCAC+CGG | - | chr6.1:451331-451350 | MS.gene82793:intron | 35.0% | |
| TGATCAGGTTTCAAAAAGGT+TGG | + | chr6.1:449683-449702 | None:intergenic | 35.0% | |
| TGTTGATCCATCTATTGTTG+AGG | - | chr6.1:451534-451553 | MS.gene82793:CDS | 35.0% | |
| TGTTTGTGTGATATTGTTCC+TGG | - | chr6.1:449608-449627 | MS.gene82793:CDS | 35.0% | |
| TTAAACGACATGATTCACGA+TGG | + | chr6.1:451970-451989 | None:intergenic | 35.0% | |
| TTGCCAGCAAATAAAAACAG+TGG | + | chr6.1:452063-452082 | None:intergenic | 35.0% | |
| TTGGTTATAGATGATTCTCC+TGG | - | chr6.1:451305-451324 | MS.gene82793:intron | 35.0% | |
| TTTGATGTGGTTACTATGCA+GGG | - | chr6.1:450158-450177 | MS.gene82793:intron | 35.0% | |
| ! | AGATTGTTAGTTTGAAGGGA+AGG | - | chr6.1:451434-451453 | MS.gene82793:CDS | 35.0% |
| ! | CACCGCTGATTATGATTATT+TGG | - | chr6.1:450117-450136 | MS.gene82793:intron | 35.0% |
| ! | CTCACTTTGTTTGGATACTT+TGG | + | chr6.1:452258-452277 | None:intergenic | 35.0% |
| ! | GTAGTTTTTCTCTGATGTTG+TGG | - | chr6.1:451665-451684 | MS.gene82793:intron | 35.0% |
| ! | TAATGTTGTTGTTACTCCAG+TGG | - | chr6.1:452390-452409 | MS.gene82793:CDS | 35.0% |
| ! | TGGTGTTTTTCTCATTGGTA+AGG | - | chr6.1:450391-450410 | MS.gene82793:intron | 35.0% |
| !! | ATGTTGTTGGTTTGATGACT+GGG | - | chr6.1:450223-450242 | MS.gene82793:intron | 35.0% |
| !! | TTTCAGAAGAAGTTGGTAGA+AGG | - | chr6.1:449920-449939 | MS.gene82793:intron | 35.0% |
| !!! | AACCTTTTTGAAACCTGATC+AGG | - | chr6.1:449682-449701 | MS.gene82793:CDS | 35.0% |
| !!! | CTGTTTTTATTTGCTGGCAA+TGG | - | chr6.1:452063-452082 | MS.gene82793:intron | 35.0% |
| !!! | GATGGTTTTGATTGATGAGA+AGG | - | chr6.1:449718-449737 | MS.gene82793:CDS | 35.0% |
| AAATGAAGACAAAGGTGGAG+AGG | - | chr6.1:450029-450048 | MS.gene82793:CDS | 40.0% | |
| AATGAAGACAAAGGTGGAGA+GGG | - | chr6.1:450030-450049 | MS.gene82793:CDS | 40.0% | |
| AATGGAAAGCAATCGGTCTT+AGG | + | chr6.1:451644-451663 | None:intergenic | 40.0% | |
| AGATTCATGCCACCATTAGA+AGG | - | chr6.1:449882-449901 | MS.gene82793:intron | 40.0% | |
| AGCATCTCACTCACTTTGTT+TGG | + | chr6.1:452267-452286 | None:intergenic | 40.0% | |
| AGCCTGATCAGGTTTCAAAA+AGG | + | chr6.1:449687-449706 | None:intergenic | 40.0% | |
| AGCTAAGAGAAATTTGCGCA+AGG | - | chr6.1:452721-452740 | MS.gene82793:CDS | 40.0% | |
| ATAAATCCCATCCTCCACAA+TGG | + | chr6.1:450944-450963 | None:intergenic | 40.0% | |
| ATCGTGTGTCTGATACATCT+GGG | - | chr6.1:452413-452432 | MS.gene82793:CDS | 40.0% | |
| ATGGATCTTATAGGGTGAAG+AGG | - | chr6.1:451506-451525 | MS.gene82793:CDS | 40.0% | |
| ATGTGTTCCATATGGTTCCA+AGG | - | chr6.1:451085-451104 | MS.gene82793:intron | 40.0% | |
| ATTCTCTCCAGAAGATGATG+GGG | - | chr6.1:450444-450463 | MS.gene82793:intron | 40.0% | |
| CAACAATTGCCTTCTAATGG+TGG | + | chr6.1:449894-449913 | None:intergenic | 40.0% | |
| CAGTAATATGCACCAGAATC+AGG | + | chr6.1:451048-451067 | None:intergenic | 40.0% | |
| CTAGCCTGCAAACAATTCAT+GGG | + | chr6.1:451995-452014 | None:intergenic | 40.0% | |
| GAAACCACAACAATATCACC+AGG | + | chr6.1:451326-451345 | None:intergenic | 40.0% | |
| GACACAAATTGAGGATTTCG+TGG | - | chr6.1:452366-452385 | MS.gene82793:CDS | 40.0% | |
| GAGGCTGTGAAATTTAGAGA+AGG | - | chr6.1:450667-450686 | MS.gene82793:CDS | 40.0% | |
| GATTCTCTCCAGAAGATGAT+GGG | - | chr6.1:450443-450462 | MS.gene82793:intron | 40.0% | |
| GCAAATTGAACCACAACAAC+CGG | + | chr6.1:450488-450507 | None:intergenic | 40.0% | |
| GCAGTGTTTGTGATGTTTGA+TGG | - | chr6.1:451226-451245 | MS.gene82793:intron | 40.0% | |
| GGATGGAAAGGTTACTAAGA+TGG | - | chr6.1:450272-450291 | MS.gene82793:intron | 40.0% | |
| GTTTGATGTGGTTACTATGC+AGG | - | chr6.1:450157-450176 | MS.gene82793:intron | 40.0% | |
| TCTAGCCTGCAAACAATTCA+TGG | + | chr6.1:451996-452015 | None:intergenic | 40.0% | |
| TCTGGTGCATATTACTGCAA+GGG | - | chr6.1:451051-451070 | MS.gene82793:intron | 40.0% | |
| TGATTCTCTCCAGAAGATGA+TGG | - | chr6.1:450442-450461 | MS.gene82793:intron | 40.0% | |
| TGGATCTTATAGGGTGAAGA+GGG | - | chr6.1:451507-451526 | MS.gene82793:CDS | 40.0% | |
| TGTGAAGCATGTGTTCCATA+TGG | - | chr6.1:451077-451096 | MS.gene82793:intron | 40.0% | |
| TGTTGAGGAGACACAAATTG+AGG | - | chr6.1:452357-452376 | MS.gene82793:CDS | 40.0% | |
| TTAGTTTCTGCAGCCAAAGT+TGG | - | chr6.1:451286-451305 | MS.gene82793:intron | 40.0% | |
| TTCTCCTGGTGATATTGTTG+TGG | - | chr6.1:451319-451338 | MS.gene82793:intron | 40.0% | |
| TTCTGGTGCATATTACTGCA+AGG | - | chr6.1:451050-451069 | MS.gene82793:intron | 40.0% | |
| TTTAAAAGTCCAGACCTGTC+AGG | - | chr6.1:452662-452681 | MS.gene82793:intron | 40.0% | |
| ! | CTATGAGTTGAATGCCATTG+TGG | - | chr6.1:450927-450946 | MS.gene82793:CDS | 40.0% |
| ! | GATGCTGAGTTGAGTGAATT+GGG | - | chr6.1:452319-452338 | MS.gene82793:CDS | 40.0% |
| ! | GGGAAGGATGATGTTGTTTA+AGG | - | chr6.1:451450-451469 | MS.gene82793:CDS | 40.0% |
| ! | TTATGTTGTCTGTGCTGTTG+TGG | - | chr6.1:450960-450979 | MS.gene82793:CDS | 40.0% |
| !! | AGCTGTTGCGTTTTGATGTA+TGG | - | chr6.1:451618-451637 | MS.gene82793:intron | 40.0% |
| !! | GATGTTGTTGGTTTGATGAC+TGG | - | chr6.1:450222-450241 | MS.gene82793:intron | 40.0% |
| !! | TAGTGATTTGGTAGAGGATC+TGG | - | chr6.1:451698-451717 | MS.gene82793:intron | 40.0% |
| !! | TCTTTTGGTTGCAGTAGTGT+AGG | - | chr6.1:451827-451846 | MS.gene82793:intron | 40.0% |
| !! | TGAGGTTAGTGATTTGGTAG+AGG | - | chr6.1:451692-451711 | MS.gene82793:intron | 40.0% |
| AAACTTACAGCCTCACATCC+AGG | + | chr6.1:452623-452642 | None:intergenic | 45.0% | |
| AAGGTTGACTGTGCGTTGTT+TGG | - | chr6.1:450410-450429 | MS.gene82793:intron | 45.0% | |
| ACCCTACGAAAGGAAGGAAA+AGG | + | chr6.1:449858-449877 | None:intergenic | 45.0% | |
| AGAGTACGTTAGGGATGGAA+AGG | - | chr6.1:450260-450279 | MS.gene82793:intron | 45.0% | |
| AGCGAAGGAACAACACTAGA+AGG | + | chr6.1:450844-450863 | None:intergenic | 45.0% | |
| AGTTCACTTATCCCTGTGCA+TGG | - | chr6.1:450058-450077 | MS.gene82793:CDS | 45.0% | |
| ATCCCTAACGTACTCTCTCT+CGG | + | chr6.1:450256-450275 | None:intergenic | 45.0% | |
| ATGTGAGGCTGTAAGTTTGG+CGG | - | chr6.1:452625-452644 | MS.gene82793:intron | 45.0% | |
| CACTACCACCAAGAAAACCA+AGG | - | chr6.1:452772-452791 | MS.gene82793:CDS | 45.0% | |
| CACTAGAAGGTTCAATGCCA+TGG | + | chr6.1:450831-450850 | None:intergenic | 45.0% | |
| CATTAGGCCTTCGATTGAAG+AGG | - | chr6.1:450873-450892 | MS.gene82793:CDS | 45.0% | |
| CCCTACGAAAGGAAGGAAAA+GGG | + | chr6.1:449857-449876 | None:intergenic | 45.0% | |
| CTACTGCTGCTGAGAAGAAT+GGG | - | chr6.1:452687-452706 | MS.gene82793:CDS | 45.0% | |
| CTCTGTTAGGCTGAAAATGC+TGG | - | chr6.1:451397-451416 | MS.gene82793:CDS | 45.0% | |
| CTGCATGAAGTCATTGCCTT+TGG | - | chr6.1:451942-451961 | MS.gene82793:CDS | 45.0% | |
| CTGGTGCATATTACTGCAAG+GGG | - | chr6.1:451052-451071 | MS.gene82793:intron | 45.0% | |
| GATCGTGTGTCTGATACATC+TGG | - | chr6.1:452412-452431 | MS.gene82793:CDS | 45.0% | |
| GGAATTCTGCACTTCTGTCA+AGG | - | chr6.1:451555-451574 | MS.gene82793:CDS | 45.0% | |
| GTAACCACATCAAACCACAC+TGG | + | chr6.1:450152-450171 | None:intergenic | 45.0% | |
| TACTGCTGCTGAGAAGAATG+GGG | - | chr6.1:452688-452707 | MS.gene82793:CDS | 45.0% | |
| TAGAGAGTCATGGAGGATCA+AGG | - | chr6.1:449631-449650 | MS.gene82793:CDS | 45.0% | |
| TCAGGCTAACTCTGTTGAGA+TGG | - | chr6.1:449700-449719 | MS.gene82793:CDS | 45.0% | |
| TGAATGCCATTGTGGAGGAT+GGG | - | chr6.1:450935-450954 | MS.gene82793:CDS | 45.0% | |
| TGGATGTGAGGCTGTAAGTT+TGG | - | chr6.1:452622-452641 | MS.gene82793:intron | 45.0% | |
| TTCACAGCCTCTTCAAAAGG+AGG | + | chr6.1:450658-450677 | None:intergenic | 45.0% | |
| TTGAATGCCATTGTGGAGGA+TGG | - | chr6.1:450934-450953 | MS.gene82793:CDS | 45.0% | |
| TTGTTCCTGGTAGAGAGTCA+TGG | - | chr6.1:449621-449640 | MS.gene82793:CDS | 45.0% | |
| TTTCCTTCCTTTCGTAGGGT+GGG | - | chr6.1:449858-449877 | MS.gene82793:intron | 45.0% | |
| ! | CCCTTTTCCTTCCTTTCGTA+GGG | - | chr6.1:449854-449873 | MS.gene82793:intron | 45.0% |
| ! | GGATGCTGAGTTGAGTGAAT+TGG | - | chr6.1:452318-452337 | MS.gene82793:CDS | 45.0% |
| ! | GTTGTGGAAGGTTTGGTTGA+GGG | - | chr6.1:450976-450995 | MS.gene82793:CDS | 45.0% |
| ! | TCAACAGAGTTAGCCTGATC+AGG | + | chr6.1:449698-449717 | None:intergenic | 45.0% |
| ! | TCCCTTTTCCTTCCTTTCGT+AGG | - | chr6.1:449853-449872 | MS.gene82793:intron | 45.0% |
| ! | TCTAGTGTTGTTCCTTCGCT+TGG | - | chr6.1:450844-450863 | MS.gene82793:CDS | 45.0% |
| ! | TGAGTTGAATGCCATTGTGG+AGG | - | chr6.1:450930-450949 | MS.gene82793:CDS | 45.0% |
| ! | TGAGTTGAGTGAATTGGGTG+AGG | - | chr6.1:452324-452343 | MS.gene82793:CDS | 45.0% |
| ! | TGTTGTGGAAGGTTTGGTTG+AGG | - | chr6.1:450975-450994 | MS.gene82793:CDS | 45.0% |
| ! | TTCTCTCCAGAAGATGATGG+GGG | - | chr6.1:450445-450464 | MS.gene82793:intron | 45.0% |
| ! | TTGTGGAAGGTTTGGTTGAG+GGG | - | chr6.1:450977-450996 | MS.gene82793:CDS | 45.0% |
| ! | TTTTCCTTCCTTTCGTAGGG+TGG | - | chr6.1:449857-449876 | MS.gene82793:intron | 45.0% |
| !! | AGGAGTGTTACTCCTGATTC+TGG | - | chr6.1:451033-451052 | MS.gene82793:intron | 45.0% |
| !! | CAGAAGAAGTTGGTAGAAGG+AGG | - | chr6.1:449923-449942 | MS.gene82793:intron | 45.0% |
| !! | CTTGGTTTTCTTGGTGGTAG+TGG | + | chr6.1:452774-452793 | None:intergenic | 45.0% |
| !! | GCAGTTTGTGTTTGATGGTG+TGG | - | chr6.1:452297-452316 | MS.gene82793:CDS | 45.0% |
| !! | GGGTTCTGAGGTTAGTGATT+TGG | - | chr6.1:451686-451705 | MS.gene82793:intron | 45.0% |
| !! | GGTGAATCCTCCTTTTGAAG+AGG | - | chr6.1:450648-450667 | MS.gene82793:intron | 45.0% |
| !! | TTTGGGAGCCTTGGTTTTCT+TGG | + | chr6.1:452783-452802 | None:intergenic | 45.0% |
| ACATCCAGGATCCACAGCTA+GGG | + | chr6.1:452609-452628 | None:intergenic | 50.0% | |
| ATCCTCCATGACTCTCTACC+AGG | + | chr6.1:449629-449648 | None:intergenic | 50.0% | |
| ATCGGAGAAAGTCCATGCAC+AGG | + | chr6.1:450073-450092 | None:intergenic | 50.0% | |
| ATGATTCACGATGGCGCCAA+AGG | + | chr6.1:451961-451980 | None:intergenic | 50.0% | |
| CAAGGCTCCCAAACTTGATC+TGG | - | chr6.1:452790-452809 | MS.gene82793:CDS | 50.0% | |
| CAGATCAAGTTTGGGAGCCT+TGG | + | chr6.1:452792-452811 | None:intergenic | 50.0% | |
| CTCTGATGTTGTGGGTTCTG+AGG | - | chr6.1:451674-451693 | MS.gene82793:intron | 50.0% | |
| GAATCTTCCCACCCTACGAA+AGG | + | chr6.1:449868-449887 | None:intergenic | 50.0% | |
| GAGTCCAGTGTGGTTTGATG+TGG | - | chr6.1:450145-450164 | MS.gene82793:intron | 50.0% | |
| GCTACTGCTGCTGAGAAGAA+TGG | - | chr6.1:452686-452705 | MS.gene82793:CDS | 50.0% | |
| GGATGTTGCTGAAGAGACAC+CGG | - | chr6.1:451719-451738 | MS.gene82793:CDS | 50.0% | |
| GGTGACATGCAACTGTTGCT+TGG | - | chr6.1:451247-451266 | MS.gene82793:intron | 50.0% | |
| GTATCAGACACACGATCCAC+TGG | + | chr6.1:452409-452428 | None:intergenic | 50.0% | |
| TACGGTATGAGCCAACACCA+GGG | + | chr6.1:449979-449998 | None:intergenic | 50.0% | |
| TCAATCGAAGGCCTAATGCG+AGG | + | chr6.1:450871-450890 | None:intergenic | 50.0% | |
| TCATACTTTGCAGTTGCCCC+TGG | - | chr6.1:449959-449978 | MS.gene82793:CDS | 50.0% | |
| TCGAGAAGACTGCATCTGCA+GGG | - | chr6.1:451473-451492 | MS.gene82793:CDS | 50.0% | |
| TCGGAGAAAGTCCATGCACA+GGG | + | chr6.1:450072-450091 | None:intergenic | 50.0% | |
| TCTGCAGGGGTCATGTTTGA+TGG | - | chr6.1:451487-451506 | MS.gene82793:CDS | 50.0% | |
| TGAATTGGGTGAGGATCCAG+AGG | - | chr6.1:452333-452352 | MS.gene82793:CDS | 50.0% | |
| TGAGGATCCAGAGGTTGTTG+AGG | - | chr6.1:452342-452361 | MS.gene82793:CDS | 50.0% | |
| TGTGTCTCCTCAACAACCTC+TGG | + | chr6.1:452352-452371 | None:intergenic | 50.0% | |
| TTCCTGGTAGAGAGTCATGG+AGG | - | chr6.1:449624-449643 | MS.gene82793:CDS | 50.0% | |
| ! | AGCCGAGAGAGAGTACGTTA+GGG | - | chr6.1:450251-450270 | MS.gene82793:intron | 50.0% |
| ! | CTGTGCTGTTGTGGAAGGTT+TGG | - | chr6.1:450969-450988 | MS.gene82793:CDS | 50.0% |
| ! | GAGAGAGAGTACGTTAGGGA+TGG | - | chr6.1:450255-450274 | MS.gene82793:intron | 50.0% |
| ! | GCTGTAAGTTTGGCGGATGA+TGG | - | chr6.1:452632-452651 | MS.gene82793:intron | 50.0% |
| ! | GTTGTCTGTGCTGTTGTGGA+AGG | - | chr6.1:450964-450983 | MS.gene82793:CDS | 50.0% |
| ! | TGTGGAAGGTTTGGTTGAGG+GGG | - | chr6.1:450978-450997 | MS.gene82793:CDS | 50.0% |
| !! | AGAAGATGATGGGGGAAGCT+GGG | - | chr6.1:450453-450472 | MS.gene82793:intron | 50.0% |
| !! | TTTGGTTGGTGAGTCCAGTG+TGG | - | chr6.1:450135-450154 | MS.gene82793:intron | 50.0% |
| ACGGTATGAGCCAACACCAG+GGG | + | chr6.1:449978-449997 | None:intergenic | 55.0% | |
| AGCTGTGGATCCTGGATGTG+AGG | - | chr6.1:452610-452629 | MS.gene82793:intron | 55.0% | |
| AGGTGCGTGTGCTTAGGATG+TGG | - | chr6.1:449651-449670 | MS.gene82793:CDS | 55.0% | |
| ATCCTGCGCGTCGTTGTCAT+AGG | - | chr6.1:451013-451032 | MS.gene82793:intron | 55.0% | |
| CACATCCAGGATCCACAGCT+AGG | + | chr6.1:452610-452629 | None:intergenic | 55.0% | |
| CAGCTTCCCCCATCATCTTC+TGG | + | chr6.1:450454-450473 | None:intergenic | 55.0% | |
| CGAGAAGACTGCATCTGCAG+GGG | - | chr6.1:451474-451493 | MS.gene82793:CDS | 55.0% | |
| CTAATGCGAGGACCAAGCGA+AGG | + | chr6.1:450859-450878 | None:intergenic | 55.0% | |
| CTTCCCACCCTACGAAAGGA+AGG | + | chr6.1:449864-449883 | None:intergenic | 55.0% | |
| CTTCGCTTGGTCCTCGCATT+AGG | - | chr6.1:450857-450876 | MS.gene82793:CDS | 55.0% | |
| GGATCAAGGTGCGTGTGCTT+AGG | - | chr6.1:449645-449664 | MS.gene82793:CDS | 55.0% | |
| GGTGCGTGTGCTTAGGATGT+GGG | - | chr6.1:449652-449671 | MS.gene82793:CDS | 55.0% | |
| GTACGGTATGAGCCAACACC+AGG | + | chr6.1:449980-449999 | None:intergenic | 55.0% | |
| GTCGAGAAGACTGCATCTGC+AGG | - | chr6.1:451472-451491 | MS.gene82793:CDS | 55.0% | |
| GTTTGGTTGAGGGGGAGGAT+TGG | - | chr6.1:450986-451005 | MS.gene82793:intron | 55.0% | |
| TTTGCAGCAGACCCTAGCTG+TGG | - | chr6.1:452595-452614 | MS.gene82793:intron | 55.0% | |
| TTTGCAGTTGCCCCTGGTGT+TGG | - | chr6.1:449965-449984 | MS.gene82793:CDS | 55.0% | |
| ! | CAGCCGAGAGAGAGTACGTT+AGG | - | chr6.1:450250-450269 | MS.gene82793:intron | 55.0% |
| ! | CGCAAGGCATTTGACGCAGT+TGG | - | chr6.1:452737-452756 | MS.gene82793:CDS | 55.0% |
| ! | GGAAGGATTGCCGGTTGTTG+TGG | - | chr6.1:450475-450494 | MS.gene82793:intron | 55.0% |
| !! | CAGAAGATGATGGGGGAAGC+TGG | - | chr6.1:450452-450471 | MS.gene82793:intron | 55.0% |
| !! | GAAGATGATGGGGGAAGCTG+GGG | - | chr6.1:450454-450473 | MS.gene82793:intron | 55.0% |
| !! | GGGAGCCTTGGTTTTCTTGG+TGG | + | chr6.1:452780-452799 | None:intergenic | 55.0% |
| CAGACCCTAGCTGTGGATCC+TGG | - | chr6.1:452602-452621 | MS.gene82793:intron | 60.0% | |
| CAGCAGCAGTAGCTCCTGAC+AGG | + | chr6.1:452679-452698 | None:intergenic | 60.0% | |
| CGGTGTGGGCGCAAACTTCT+TGG | + | chr6.1:450102-450121 | None:intergenic | 60.0% | |
| CTCCTATGACAACGACGCGC+AGG | + | chr6.1:451018-451037 | None:intergenic | 60.0% | |
| GCAGTAGCTCCTGACAGGTC+TGG | + | chr6.1:452674-452693 | None:intergenic | 60.0% | |
| GCGTGTGCTTAGGATGTGGG+AGG | - | chr6.1:449655-449674 | MS.gene82793:CDS | 60.0% | |
| GGAAGCTGGGGAAGGATTGC+CGG | - | chr6.1:450466-450485 | MS.gene82793:intron | 60.0% | |
| TGCTGAAGAGACACCGGCCA+AGG | - | chr6.1:451725-451744 | MS.gene82793:CDS | 60.0% | |
| TGGTTGAGGGGGAGGATTGG+TGG | - | chr6.1:450989-451008 | MS.gene82793:intron | 60.0% | |
| ! | ATGATGGGGGAAGCTGGGGA+AGG | - | chr6.1:450458-450477 | MS.gene82793:intron | 60.0% |
| ! | GGAAGGTTTGGTTGAGGGGG+AGG | - | chr6.1:450981-451000 | MS.gene82793:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 449590 | 452817 | 449590 | ID=MS.gene82793 |
| chr6.1 | mRNA | 449590 | 452817 | 449590 | ID=MS.gene82793.t1;Parent=MS.gene82793 |
| chr6.1 | exon | 452668 | 452817 | 452668 | ID=MS.gene82793.t1.exon1;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 452668 | 452817 | 452668 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| chr6.1 | exon | 452265 | 452532 | 452265 | ID=MS.gene82793.t1.exon2;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 452265 | 452532 | 452265 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| chr6.1 | exon | 452126 | 452184 | 452126 | ID=MS.gene82793.t1.exon3;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 452126 | 452184 | 452126 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| chr6.1 | exon | 451911 | 451994 | 451911 | ID=MS.gene82793.t1.exon4;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 451911 | 451994 | 451911 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| chr6.1 | exon | 451718 | 451785 | 451718 | ID=MS.gene82793.t1.exon5;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 451718 | 451785 | 451718 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| chr6.1 | exon | 451334 | 451588 | 451334 | ID=MS.gene82793.t1.exon6;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 451334 | 451588 | 451334 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| chr6.1 | exon | 451104 | 451221 | 451104 | ID=MS.gene82793.t1.exon7;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 451104 | 451221 | 451104 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| chr6.1 | exon | 450831 | 451001 | 450831 | ID=MS.gene82793.t1.exon8;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 450831 | 451001 | 450831 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| chr6.1 | exon | 450661 | 450738 | 450661 | ID=MS.gene82793.t1.exon9;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 450661 | 450738 | 450661 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| chr6.1 | exon | 449945 | 450106 | 449945 | ID=MS.gene82793.t1.exon10;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 449945 | 450106 | 449945 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| chr6.1 | exon | 449590 | 449805 | 449590 | ID=MS.gene82793.t1.exon11;Parent=MS.gene82793.t1 |
| chr6.1 | CDS | 449590 | 449805 | 449590 | ID=cds.MS.gene82793.t1;Parent=MS.gene82793.t1 |
| Gene Sequence |
| Protein sequence |
