Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85463.t1 | XP_003624084.2 | 99 | 407 | 4 | 0 | 1 | 407 | 57 | 463 | 7.20E-238 | 832.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85463.t1 | P18485 | 70.1 | 415 | 116 | 5 | 1 | 408 | 58 | 471 | 6.3e-174 | 611.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85463.t1 | G7L6P5 | 99.0 | 407 | 4 | 0 | 1 | 407 | 57 | 463 | 5.2e-238 | 832.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85463 | MS.gene06177 | PPI |
| MS.gene85463 | MS.gene62175 | PPI |
| MS.gene85463 | MS.gene049021 | PPI |
| MS.gene20161 | MS.gene85463 | PPI |
| MS.gene85463 | MS.gene66343 | PPI |
| MS.gene059852 | MS.gene85463 | PPI |
| MS.gene008145 | MS.gene85463 | PPI |
| MS.gene66342 | MS.gene85463 | PPI |
| MS.gene63500 | MS.gene85463 | PPI |
| MS.gene030294 | MS.gene85463 | PPI |
| MS.gene85463 | MS.gene20160 | PPI |
| MS.gene064035 | MS.gene85463 | PPI |
| MS.gene85463 | MS.gene031398 | PPI |
| MS.gene85463 | MS.gene55882 | PPI |
| MS.gene065184 | MS.gene85463 | PPI |
| MS.gene85463 | MS.gene75059 | PPI |
| MS.gene85463 | MS.gene63294 | PPI |
| MS.gene85463 | MS.gene06176 | PPI |
| MS.gene049022 | MS.gene85463 | PPI |
| MS.gene85463 | MS.gene55883 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85463.t1 | MTR_7g079080 | 98.832 | 428 | 5 | 0 | 1 | 428 | 57 | 484 | 0.0 | 881 |
| MS.gene85463.t1 | MTR_7g079080 | 98.681 | 379 | 5 | 0 | 50 | 428 | 1 | 379 | 0.0 | 776 |
| MS.gene85463.t1 | MTR_8g028600 | 78.505 | 428 | 88 | 3 | 1 | 428 | 57 | 480 | 0.0 | 697 |
| MS.gene85463.t1 | MTR_8g098930 | 64.977 | 434 | 141 | 3 | 1 | 428 | 58 | 486 | 0.0 | 605 |
| MS.gene85463.t1 | MTR_6g091760 | 54.856 | 381 | 171 | 1 | 1 | 381 | 60 | 439 | 2.91e-160 | 459 |
| MS.gene85463.t1 | MTR_4g097540 | 52.727 | 385 | 173 | 3 | 1 | 376 | 50 | 434 | 4.28e-160 | 460 |
| MS.gene85463.t1 | MTR_8g101750 | 53.506 | 385 | 172 | 1 | 1 | 385 | 58 | 435 | 5.22e-158 | 453 |
| MS.gene85463.t1 | MTR_3g103550 | 52.880 | 382 | 174 | 3 | 1 | 377 | 48 | 428 | 5.57e-158 | 455 |
| MS.gene85463.t1 | MTR_5g015020 | 48.921 | 417 | 203 | 4 | 1 | 409 | 50 | 464 | 6.75e-157 | 452 |
| MS.gene85463.t1 | MTR_8g101820 | 48.969 | 388 | 172 | 3 | 1 | 385 | 58 | 422 | 1.56e-139 | 405 |
| MS.gene85463.t1 | MTR_6g463260 | 41.910 | 377 | 217 | 2 | 1 | 376 | 150 | 525 | 1.82e-118 | 356 |
| MS.gene85463.t1 | MTR_5g011400 | 37.634 | 372 | 231 | 1 | 1 | 372 | 118 | 488 | 4.14e-99 | 305 |
| MS.gene85463.t1 | MTR_2g090730 | 48.889 | 90 | 42 | 1 | 9 | 98 | 13 | 98 | 7.92e-26 | 104 |
| MS.gene85463.t1 | MTR_5g033230 | 23.547 | 344 | 234 | 13 | 30 | 349 | 100 | 438 | 1.83e-19 | 90.9 |
| MS.gene85463.t1 | MTR_5g033230 | 23.547 | 344 | 234 | 13 | 30 | 349 | 100 | 438 | 1.89e-19 | 90.9 |
| MS.gene85463.t1 | MTR_8g021970 | 43.443 | 122 | 34 | 4 | 176 | 297 | 11 | 97 | 4.75e-19 | 82.4 |
| MS.gene85463.t1 | MTR_8g023140 | 21.833 | 371 | 262 | 12 | 28 | 375 | 149 | 514 | 2.26e-15 | 78.6 |
| MS.gene85463.t1 | MTR_7g106830 | 20.621 | 354 | 255 | 11 | 38 | 382 | 135 | 471 | 4.27e-15 | 77.4 |
| MS.gene85463.t1 | MTR_8g091280 | 24.062 | 320 | 215 | 11 | 38 | 346 | 137 | 439 | 1.18e-14 | 76.3 |
| MS.gene85463.t1 | MTR_3g072680 | 24.490 | 343 | 226 | 14 | 38 | 373 | 81 | 397 | 4.16e-14 | 73.9 |
| MS.gene85463.t1 | MTR_4g011820 | 22.727 | 352 | 234 | 12 | 30 | 373 | 61 | 382 | 2.52e-13 | 71.6 |
| MS.gene85463.t1 | MTR_2g090615 | 21.253 | 367 | 255 | 11 | 22 | 375 | 67 | 412 | 4.50e-13 | 70.9 |
| MS.gene85463.t1 | MTR_1807s0010 | 25.128 | 195 | 132 | 6 | 38 | 231 | 69 | 250 | 1.40e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85463.t1 | AT3G61510 | 64.368 | 435 | 133 | 3 | 1 | 419 | 57 | 485 | 0.0 | 588 |
| MS.gene85463.t1 | AT1G01480 | 62.329 | 438 | 144 | 5 | 1 | 419 | 58 | 493 | 0.0 | 564 |
| MS.gene85463.t1 | AT4G11280 | 62.260 | 416 | 146 | 2 | 1 | 405 | 61 | 476 | 0.0 | 547 |
| MS.gene85463.t1 | AT1G01480 | 62.211 | 389 | 126 | 5 | 50 | 419 | 1 | 387 | 2.44e-173 | 490 |
| MS.gene85463.t1 | AT4G37770 | 56.430 | 381 | 163 | 1 | 1 | 378 | 50 | 430 | 1.13e-164 | 471 |
| MS.gene85463.t1 | AT4G08040 | 54.308 | 383 | 175 | 0 | 1 | 383 | 48 | 430 | 1.33e-162 | 466 |
| MS.gene85463.t1 | AT2G22810 | 51.174 | 426 | 185 | 4 | 1 | 405 | 50 | 473 | 1.55e-158 | 456 |
| MS.gene85463.t1 | AT4G26200 | 55.352 | 383 | 169 | 2 | 1 | 381 | 64 | 446 | 7.53e-157 | 451 |
| MS.gene85463.t1 | AT5G65800 | 52.835 | 388 | 180 | 2 | 1 | 385 | 50 | 437 | 9.75e-155 | 446 |
| MS.gene85463.t1 | AT3G49700 | 53.213 | 389 | 177 | 2 | 1 | 385 | 50 | 437 | 7.32e-154 | 444 |
| MS.gene85463.t1 | AT5G51690 | 41.444 | 374 | 217 | 2 | 1 | 373 | 115 | 487 | 6.90e-111 | 335 |
| MS.gene85463.t1 | AT5G51690 | 41.525 | 354 | 206 | 1 | 20 | 373 | 12 | 364 | 4.32e-107 | 321 |
| MS.gene85463.t1 | AT1G62960 | 37.940 | 369 | 225 | 3 | 6 | 373 | 182 | 547 | 9.47e-100 | 308 |
| MS.gene85463.t1 | AT1G23310 | 24.854 | 342 | 232 | 13 | 30 | 349 | 100 | 438 | 5.62e-21 | 95.1 |
| MS.gene85463.t1 | AT1G23310 | 24.854 | 342 | 232 | 13 | 30 | 349 | 100 | 438 | 1.04e-20 | 94.7 |
| MS.gene85463.t1 | AT1G70580 | 24.128 | 344 | 232 | 13 | 30 | 349 | 100 | 438 | 1.10e-19 | 91.7 |
| MS.gene85463.t1 | AT1G70580 | 24.128 | 344 | 232 | 13 | 30 | 349 | 100 | 438 | 1.10e-19 | 91.7 |
| MS.gene85463.t1 | AT1G70580 | 24.128 | 344 | 232 | 13 | 30 | 349 | 100 | 438 | 1.10e-19 | 91.7 |
| MS.gene85463.t1 | AT1G70580 | 24.128 | 344 | 232 | 13 | 30 | 349 | 100 | 438 | 1.10e-19 | 91.7 |
| MS.gene85463.t1 | AT1G17290 | 22.849 | 372 | 257 | 12 | 28 | 375 | 168 | 533 | 7.17e-18 | 86.3 |
| MS.gene85463.t1 | AT1G72330 | 23.656 | 372 | 254 | 14 | 28 | 375 | 165 | 530 | 2.35e-17 | 84.7 |
| MS.gene85463.t1 | AT2G22250 | 24.403 | 377 | 245 | 16 | 12 | 373 | 112 | 463 | 2.93e-16 | 80.9 |
| MS.gene85463.t1 | AT2G22250 | 24.403 | 377 | 245 | 16 | 12 | 373 | 112 | 463 | 2.93e-16 | 80.9 |
| MS.gene85463.t1 | AT2G22250 | 24.403 | 377 | 245 | 16 | 12 | 373 | 65 | 416 | 3.05e-16 | 80.9 |
| MS.gene85463.t1 | AT1G72330 | 25.103 | 243 | 173 | 7 | 28 | 264 | 165 | 404 | 1.62e-15 | 78.6 |
| MS.gene85463.t1 | AT1G72330 | 22.597 | 385 | 255 | 14 | 28 | 375 | 165 | 543 | 3.52e-15 | 77.8 |
| MS.gene85463.t1 | AT4G23600 | 24.167 | 360 | 243 | 13 | 38 | 388 | 78 | 416 | 7.88e-15 | 76.3 |
| MS.gene85463.t1 | AT1G80360 | 23.099 | 355 | 228 | 13 | 30 | 373 | 61 | 381 | 6.84e-14 | 73.6 |
| MS.gene85463.t1 | AT1G80360 | 23.099 | 355 | 228 | 13 | 30 | 373 | 61 | 381 | 6.84e-14 | 73.6 |
| MS.gene85463.t1 | AT1G80360 | 23.099 | 355 | 228 | 13 | 30 | 373 | 61 | 381 | 6.84e-14 | 73.6 |
| MS.gene85463.t1 | AT1G80360 | 23.099 | 355 | 228 | 13 | 30 | 373 | 61 | 381 | 6.84e-14 | 73.6 |
| MS.gene85463.t1 | AT5G36160 | 20.891 | 359 | 259 | 11 | 32 | 383 | 79 | 419 | 4.57e-13 | 70.9 |
| MS.gene85463.t1 | AT4G23600 | 24.169 | 331 | 223 | 12 | 67 | 388 | 1 | 312 | 2.42e-12 | 68.2 |
| MS.gene85463.t1 | AT2G24850 | 22.034 | 354 | 234 | 15 | 38 | 375 | 92 | 419 | 4.52e-12 | 68.2 |
| MS.gene85463.t1 | AT2G20610 | 20.270 | 370 | 263 | 11 | 38 | 397 | 109 | 456 | 7.57e-12 | 67.4 |
| MS.gene85463.t1 | AT4G23590 | 24.791 | 359 | 217 | 15 | 38 | 375 | 78 | 404 | 9.66e-12 | 67.0 |
| MS.gene85463.t1 | AT4G28420 | 21.429 | 350 | 240 | 12 | 38 | 375 | 103 | 429 | 1.71e-11 | 66.2 |
| MS.gene85463.t1 | AT2G20610 | 23.000 | 200 | 138 | 5 | 38 | 237 | 109 | 292 | 8.89e-11 | 63.9 |
Find 68 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTTACATTTCTGAATTC+TGG | 0.196320 | 7.2:-26587256 | None:intergenic |
| GTTACATACGCTGGATAATA+AGG | 0.224388 | 7.2:-26587538 | None:intergenic |
| CTGAATTCATTCACTCCTTC+TGG | 0.240374 | 7.2:-26587199 | None:intergenic |
| AGAATTAGAGCATTTGTTAA+TGG | 0.266560 | 7.2:+26590133 | MS.gene85463:CDS |
| GTAATGCAGGGCTATTCTTT+TGG | 0.267363 | 7.2:+26589927 | MS.gene85463:CDS |
| TTTGTTAATGGAAGAGAAAA+AGG | 0.268436 | 7.2:+26590145 | MS.gene85463:CDS |
| CATATTTGTGGACAAATTCT+TGG | 0.291943 | 7.2:+26589823 | MS.gene85463:CDS |
| AGTATGTGATGAAATTTATT+CGG | 0.293276 | 7.2:+26589556 | MS.gene85463:CDS |
| GAATTTGAGAGGTTTGTTAA+AGG | 0.296748 | 7.2:+26589952 | MS.gene85463:CDS |
| AAATTTCATCACATACTAAA+TGG | 0.298710 | 7.2:-26589550 | None:intergenic |
| GCTTAATGTTTCGCCGGGTT+CGG | 0.325824 | 7.2:+26590030 | MS.gene85463:CDS |
| GTATGTGATGAAATTTATTC+GGG | 0.329260 | 7.2:+26589557 | MS.gene85463:CDS |
| TCAAAAGACATGGGTCTTCC+AGG | 0.338081 | 7.2:+26589677 | MS.gene85463:CDS |
| GTTGTTCCTAAAGGGTTTGA+TGG | 0.349487 | 7.2:-26589473 | None:intergenic |
| TTTCTAATGTTGTTCCTAAA+GGG | 0.375515 | 7.2:-26589481 | None:intergenic |
| ACAAATCCATCAAACCCTTT+AGG | 0.383368 | 7.2:+26589467 | MS.gene85463:CDS |
| GGAGTGCAAATTGAGGCCTT+TGG | 0.421480 | 7.2:-26587178 | None:intergenic |
| AGCTGAAGTTATTCAAGAAA+TGG | 0.423007 | 7.2:+26589613 | MS.gene85463:CDS |
| TTGATGAGTGGTGGAGCAAC+AGG | 0.425517 | 7.2:+26587454 | MS.gene85463:CDS |
| GCAAACTTTCAAGACTATCA+TGG | 0.443543 | 7.2:+26587229 | MS.gene85463:CDS |
| AAGAATAGCCCTGCATTACT+TGG | 0.453146 | 7.2:-26589923 | None:intergenic |
| CGTGACTTGTGTTGGAGAAC+CGG | 0.453157 | 7.2:+26589323 | MS.gene85463:CDS |
| TTAAAGGAGAAAACATTTGA+AGG | 0.453549 | 7.2:+26589968 | MS.gene85463:CDS |
| TTGAAGGTGAAATGAAACTT+TGG | 0.460869 | 7.2:+26589984 | MS.gene85463:CDS |
| CTCCACCACTCATCAATATA+CGG | 0.471980 | 7.2:-26587447 | None:intergenic |
| ACTTGCTTACCAAGTAATGC+AGG | 0.478285 | 7.2:+26589914 | MS.gene85463:CDS |
| GTACGTTGGTGTGTCGAAAA+CGG | 0.488272 | 7.2:-26589582 | None:intergenic |
| GCTTTCGGATGACATATTTG+TGG | 0.499785 | 7.2:+26589811 | MS.gene85463:CDS |
| AGAATGTTATGTCTCCTCAT+AGG | 0.509549 | 7.2:+26590236 | MS.gene85463:CDS |
| TTAATTGCTCTGAGCCTGGT+TGG | 0.510000 | 7.2:+26590056 | MS.gene85463:CDS |
| TTTGAGCTATGACATTGGAC+AGG | 0.528614 | 7.2:-26589359 | None:intergenic |
| TCCTTCTGGAGTGCAAATTG+AGG | 0.536824 | 7.2:-26587185 | None:intergenic |
| AATTGTTTGAGCTATGACAT+TGG | 0.538692 | 7.2:-26589364 | None:intergenic |
| TTACATACGCTGGATAATAA+GGG | 0.542969 | 7.2:-26587537 | None:intergenic |
| CCACTCATCAATATACGGTC+AGG | 0.543840 | 7.2:-26587442 | None:intergenic |
| CTATAGTTTATCAAAAGACA+TGG | 0.547419 | 7.2:+26589667 | MS.gene85463:CDS |
| AGTAAAGCTTAATGTTTCGC+CGG | 0.558099 | 7.2:+26590024 | MS.gene85463:CDS |
| GTAAAGCTTAATGTTTCGCC+GGG | 0.558703 | 7.2:+26590025 | MS.gene85463:CDS |
| GTCAAAAGTGAGAGGTGGTA+GGG | 0.559194 | 7.2:+26587408 | MS.gene85463:CDS |
| GAAGAAAACATCAATGTGAA+AGG | 0.559280 | 7.2:+26589434 | MS.gene85463:CDS |
| GCCTCAATTTGCACTCCAGA+AGG | 0.569114 | 7.2:+26587184 | MS.gene85463:CDS |
| ACCAAACCGACTCTAAAACC+TGG | 0.573112 | 7.2:-26589695 | None:intergenic |
| TGTCAAAAGTGAGAGGTGGT+AGG | 0.573183 | 7.2:+26587407 | MS.gene85463:CDS |
| GCTCGAACAAGTGGTGAATG+AGG | 0.578297 | 7.2:-26590280 | None:intergenic |
| GATTTGTCCGTGACTTGTGT+TGG | 0.592694 | 7.2:+26589315 | MS.gene85463:intron |
| CTTGCTTACCAAGTAATGCA+GGG | 0.594284 | 7.2:+26589915 | MS.gene85463:CDS |
| CGGTTCTCCAACACAAGTCA+CGG | 0.598654 | 7.2:-26589322 | None:intergenic |
| AATTAAGTAGCTCGAACAAG+TGG | 0.599852 | 7.2:-26590289 | None:intergenic |
| GAATGAGGAGACATCCTATG+AGG | 0.601031 | 7.2:-26590250 | None:intergenic |
| GCTTTGATCTGATTGAAGAG+TGG | 0.606490 | 7.2:+26587143 | MS.gene85463:CDS |
| GAGCAATTAAAAGCCGAACC+CGG | 0.608611 | 7.2:-26590043 | None:intergenic |
| ACAAGTGGTGAATGAGGCAT+TGG | 0.610116 | 7.2:-26590274 | None:intergenic |
| GAATGAGGCATTGGTGAATG+AGG | 0.611463 | 7.2:-26590265 | None:intergenic |
| AAACAGTTGAAATCAAACGT+TGG | 0.627989 | 7.2:+26590170 | MS.gene85463:CDS |
| TTCATGTCAAAAGTGAGAGG+TGG | 0.632498 | 7.2:+26587403 | MS.gene85463:CDS |
| TACGCTGGATAATAAGGGCT+AGG | 0.635604 | 7.2:-26587532 | None:intergenic |
| GACCGTATATTGATGAGTGG+TGG | 0.638618 | 7.2:+26587445 | MS.gene85463:CDS |
| GTGGATAAGAAATAATCCAA+AGG | 0.641055 | 7.2:+26587162 | MS.gene85463:CDS |
| GACAGGAATTAGTTGCACAC+CGG | 0.645023 | 7.2:-26589342 | None:intergenic |
| AATTTCATGTCAAAAGTGAG+AGG | 0.665592 | 7.2:+26587400 | MS.gene85463:CDS |
| AAACTGTTGAGATTGCATTG+AGG | 0.669177 | 7.2:+26590110 | MS.gene85463:CDS |
| TATAGTTTATCAAAAGACAT+GGG | 0.672710 | 7.2:+26589668 | MS.gene85463:CDS |
| TCAGCTACACTTACGTACGT+TGG | 0.685435 | 7.2:-26589596 | None:intergenic |
| TATGTGATGAAATTTATTCG+GGG | 0.688718 | 7.2:+26589558 | MS.gene85463:CDS |
| AAACAAACTCTATACCAACC+AGG | 0.691655 | 7.2:-26590070 | None:intergenic |
| AACGATGAAGTTGTGAACTG+CGG | 0.701230 | 7.2:+26589728 | MS.gene85463:CDS |
| CCTGACCGTATATTGATGAG+TGG | 0.701393 | 7.2:+26587442 | MS.gene85463:CDS |
| TATGTCATCCGAAAGCACTG+CGG | 0.774759 | 7.2:-26589804 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTATTTATTAAAATA+AGG | + | chr7.2:26588136-26588155 | MS.gene85463:intron | 0.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | + | chr7.2:26588457-26588476 | MS.gene85463:intron | 10.0% |
| !!! | AAATTATTTTAATCAACTAT+TGG | + | chr7.2:26588423-26588442 | MS.gene85463:intron | 10.0% |
| !!! | ATATTTTGTTTTGATTTAAA+AGG | + | chr7.2:26587671-26587690 | MS.gene85463:intron | 10.0% |
| !!! | CTTATTTAATTTTTTTTTCT+AGG | + | chr7.2:26587369-26587388 | MS.gene85463:intron | 10.0% |
| !!! | GAATTTTTTTTCTTATATAT+AGG | - | chr7.2:26588235-26588254 | None:intergenic | 10.0% |
| !!! | TAAAATTTGATGATTTTTTA+AGG | + | chr7.2:26587757-26587776 | MS.gene85463:intron | 10.0% |
| !!! | TATTTTGTTTTGATTTAAAA+GGG | + | chr7.2:26587672-26587691 | MS.gene85463:intron | 10.0% |
| !! | GTAACATAATATTAATTGAA+GGG | + | chr7.2:26588487-26588506 | MS.gene85463:intron | 15.0% |
| !! | TAAATGTGAAATTTGAATTA+AGG | - | chr7.2:26588944-26588963 | None:intergenic | 15.0% |
| !! | TGTAACATAATATTAATTGA+AGG | + | chr7.2:26588486-26588505 | MS.gene85463:intron | 15.0% |
| !! | TGTTAAAAATAATGTGTTAA+GGG | - | chr7.2:26588055-26588074 | None:intergenic | 15.0% |
| !!! | TGATTTTTGGAATTAAATAT+TGG | - | chr7.2:26588699-26588718 | None:intergenic | 15.0% |
| !! | AAATTTCATCACATACTAAA+TGG | - | chr7.2:26589553-26589572 | None:intergenic | 20.0% |
| !! | AAATTTCTTTCAACAAAAGT+TGG | - | chr7.2:26588867-26588886 | None:intergenic | 20.0% |
| !! | AGTATGTGATGAAATTTATT+CGG | + | chr7.2:26589556-26589575 | MS.gene85463:CDS | 20.0% |
| !! | GTGTTAAAAATAATGTGTTA+AGG | - | chr7.2:26588056-26588075 | None:intergenic | 20.0% |
| !! | TATAGTTTATCAAAAGACAT+GGG | + | chr7.2:26589668-26589687 | MS.gene85463:CDS | 20.0% |
| !! | TATATATTTGATTGACCATA+GGG | + | chr7.2:26589049-26589068 | MS.gene85463:intron | 20.0% |
| !! | TATATGACTTAATTAACAAG+TGG | + | chr7.2:26589100-26589119 | MS.gene85463:intron | 20.0% |
| !! | TATGGTCAATCAAATATATA+AGG | - | chr7.2:26589049-26589068 | None:intergenic | 20.0% |
| !! | TTATATATTTGATTGACCAT+AGG | + | chr7.2:26589048-26589067 | MS.gene85463:intron | 20.0% |
| !!! | AAGACATAAAGCTTTTTTTT+GGG | + | chr7.2:26587956-26587975 | MS.gene85463:intron | 20.0% |
| !!! | TCAACTTTAACTATGATTTT+TGG | - | chr7.2:26588712-26588731 | None:intergenic | 20.0% |
| !!! | TCTTTTTTAACAGCTAATTT+TGG | - | chr7.2:26587937-26587956 | None:intergenic | 20.0% |
| !!! | TGAATTAATCATGTTTTGTT+TGG | + | chr7.2:26587483-26587502 | MS.gene85463:CDS | 20.0% |
| !!! | TTTTGTTGAAAGAAATTTCA+TGG | + | chr7.2:26588869-26588888 | MS.gene85463:intron | 20.0% |
| !!! | TTTTTTTTGGGTACATAATA+AGG | + | chr7.2:26587968-26587987 | MS.gene85463:intron | 20.0% |
| ! | AATCAAATTCAAATCCTATG+TGG | - | chr7.2:26589076-26589095 | None:intergenic | 25.0% |
| ! | AGAAGAAGTTATTATTGCAT+TGG | + | chr7.2:26588521-26588540 | MS.gene85463:intron | 25.0% |
| ! | CTATAGTTTATCAAAAGACA+TGG | + | chr7.2:26589667-26589686 | MS.gene85463:CDS | 25.0% |
| ! | GTATGTGATGAAATTTATTC+GGG | + | chr7.2:26589557-26589576 | MS.gene85463:CDS | 25.0% |
| ! | TAAAAATAATGTGTTAAGGG+TGG | - | chr7.2:26588052-26588071 | None:intergenic | 25.0% |
| ! | TAAAACATCTTAGAGATAAG+TGG | - | chr7.2:26589141-26589160 | None:intergenic | 25.0% |
| ! | TATGTGATGAAATTTATTCG+GGG | + | chr7.2:26589558-26589577 | MS.gene85463:CDS | 25.0% |
| ! | TATTATTCCAGTTAAAAACC+TGG | - | chr7.2:26587826-26587845 | None:intergenic | 25.0% |
| ! | TTAAAGGAGAAAACATTTGA+AGG | + | chr7.2:26589968-26589987 | MS.gene85463:CDS | 25.0% |
| ! | TTCCTATAACATTCTGTATA+CGG | - | chr7.2:26588305-26588324 | None:intergenic | 25.0% |
| ! | TTGTTAATGGAAGAGAAAAA+GGG | + | chr7.2:26590146-26590165 | MS.gene85463:CDS | 25.0% |
| ! | TTTAGATGAAGAATTGAGTT+TGG | - | chr7.2:26589165-26589184 | None:intergenic | 25.0% |
| ! | TTTCCAAGTTGTGTTATATT+TGG | - | chr7.2:26588808-26588827 | None:intergenic | 25.0% |
| ! | TTTCTAATGTTGTTCCTAAA+GGG | - | chr7.2:26589484-26589503 | None:intergenic | 25.0% |
| ! | TTTCTGAACAATAAAGCAAT+TGG | - | chr7.2:26587701-26587720 | None:intergenic | 25.0% |
| ! | TTTGTTAATGGAAGAGAAAA+AGG | + | chr7.2:26590145-26590164 | MS.gene85463:CDS | 25.0% |
| !! | AGAATTAGAGCATTTGTTAA+TGG | + | chr7.2:26590133-26590152 | MS.gene85463:CDS | 25.0% |
| !! | TAATTACTTGTTGACTAATG+AGG | - | chr7.2:26588672-26588691 | None:intergenic | 25.0% |
| !! | TCTAAATATGAGCTTTGATT+AGG | + | chr7.2:26589179-26589198 | MS.gene85463:intron | 25.0% |
| !! | TTTTCTAATGTTGTTCCTAA+AGG | - | chr7.2:26589485-26589504 | None:intergenic | 25.0% |
| !!! | AATTAAGGAAAAGTGTTATG+TGG | - | chr7.2:26588929-26588948 | None:intergenic | 25.0% |
| !!! | GAAGACATAAAGCTTTTTTT+TGG | + | chr7.2:26587955-26587974 | MS.gene85463:intron | 25.0% |
| !!! | TAATTTTTTTTTCTAGGCTG+TGG | + | chr7.2:26587375-26587394 | MS.gene85463:intron | 25.0% |
| !!! | TTGTGTCCACTTTTATTTTA+AGG | - | chr7.2:26587627-26587646 | None:intergenic | 25.0% |
| AAACAGTTGAAATCAAACGT+TGG | + | chr7.2:26590170-26590189 | MS.gene85463:CDS | 30.0% | |
| AATTGTTTGAGCTATGACAT+TGG | - | chr7.2:26589367-26589386 | None:intergenic | 30.0% | |
| AATTTCATGTCAAAAGTGAG+AGG | + | chr7.2:26587400-26587419 | MS.gene85463:CDS | 30.0% | |
| AGCTGAAGTTATTCAAGAAA+TGG | + | chr7.2:26589613-26589632 | MS.gene85463:CDS | 30.0% | |
| ATCAGAATACAGTCATCTTA+TGG | + | chr7.2:26588764-26588783 | MS.gene85463:intron | 30.0% | |
| ATTGCATACAGATTAAGGAA+TGG | + | chr7.2:26588367-26588386 | MS.gene85463:intron | 30.0% | |
| CACACACCTTAAAATAAAAG+TGG | + | chr7.2:26587618-26587637 | MS.gene85463:intron | 30.0% | |
| CATATTTGTGGACAAATTCT+TGG | + | chr7.2:26589823-26589842 | MS.gene85463:CDS | 30.0% | |
| CATTGAATAAAACCAGACAT+AGG | - | chr7.2:26587580-26587599 | None:intergenic | 30.0% | |
| GAAGAAAACATCAATGTGAA+AGG | + | chr7.2:26589434-26589453 | MS.gene85463:CDS | 30.0% | |
| GTGGATAAGAAATAATCCAA+AGG | + | chr7.2:26587162-26587181 | MS.gene85463:CDS | 30.0% | |
| TGGGTACATAATAAGGTATA+AGG | + | chr7.2:26587975-26587994 | MS.gene85463:intron | 30.0% | |
| TTACATACGCTGGATAATAA+GGG | - | chr7.2:26587540-26587559 | None:intergenic | 30.0% | |
| TTGAAGGTGAAATGAAACTT+TGG | + | chr7.2:26589984-26590003 | MS.gene85463:CDS | 30.0% | |
| TTGCTTACATTTCTGAATTC+TGG | - | chr7.2:26587259-26587278 | None:intergenic | 30.0% | |
| TTTCTTATATATAGGACCAG+AGG | - | chr7.2:26588227-26588246 | None:intergenic | 30.0% | |
| ! | TTCTTTTGGATGAATTTGAG+AGG | + | chr7.2:26589941-26589960 | MS.gene85463:CDS | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr7.2:26588587-26588606 | MS.gene85463:intron | 30.0% |
| !! | GAATTTGAGAGGTTTGTTAA+AGG | + | chr7.2:26589952-26589971 | MS.gene85463:CDS | 30.0% |
| !!! | TAGAGTTTGTTTTGCTAACA+TGG | + | chr7.2:26590081-26590100 | MS.gene85463:CDS | 30.0% |
| AAACAAACTCTATACCAACC+AGG | - | chr7.2:26590073-26590092 | None:intergenic | 35.0% | |
| AAACTGTTGAGATTGCATTG+AGG | + | chr7.2:26590110-26590129 | MS.gene85463:CDS | 35.0% | |
| AAGATGACTGTATTCTGATG+TGG | - | chr7.2:26588763-26588782 | None:intergenic | 35.0% | |
| ACAAATCCATCAAACCCTTT+AGG | + | chr7.2:26589467-26589486 | MS.gene85463:CDS | 35.0% | |
| AGAATGTTATGTCTCCTCAT+AGG | + | chr7.2:26590236-26590255 | MS.gene85463:CDS | 35.0% | |
| AGGCAATTGCATACAGATTA+AGG | + | chr7.2:26588362-26588381 | MS.gene85463:intron | 35.0% | |
| AGTAAAGCTTAATGTTTCGC+CGG | + | chr7.2:26590024-26590043 | MS.gene85463:CDS | 35.0% | |
| ATAAAATGAGCTACTTCCTC+TGG | + | chr7.2:26588208-26588227 | MS.gene85463:intron | 35.0% | |
| CAGCCAAATATAACACAACT+TGG | + | chr7.2:26588802-26588821 | MS.gene85463:intron | 35.0% | |
| CATAGGAGTAATGAAAAGAG+AGG | - | chr7.2:26587563-26587582 | None:intergenic | 35.0% | |
| GACCGTATACAGAATGTTAT+AGG | + | chr7.2:26588300-26588319 | MS.gene85463:intron | 35.0% | |
| GCAAACTTTCAAGACTATCA+TGG | + | chr7.2:26587229-26587248 | MS.gene85463:CDS | 35.0% | |
| GGTAGAAAAATGTCGAGTTT+CGG | + | chr7.2:26589749-26589768 | MS.gene85463:CDS | 35.0% | |
| GTTACATACGCTGGATAATA+AGG | - | chr7.2:26587541-26587560 | None:intergenic | 35.0% | |
| TATTCCAGTTAAAAACCTGG+TGG | - | chr7.2:26587823-26587842 | None:intergenic | 35.0% | |
| TGATGTGGTCATGATTTCAA+AGG | - | chr7.2:26588748-26588767 | None:intergenic | 35.0% | |
| ! | CTTTTCATTACTCCTATGTC+TGG | + | chr7.2:26587565-26587584 | MS.gene85463:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr7.2:26588341-26588360 | None:intergenic | 35.0% |
| !! | GACTTAGCTTTTCTTCAAGA+AGG | + | chr7.2:26590206-26590225 | MS.gene85463:CDS | 35.0% |
| !! | TTCAAAATGAGTGTCGCTTT+AGG | + | chr7.2:26588342-26588361 | MS.gene85463:intron | 35.0% |
| !!! | CAGCGCGAATTTTTTACAAA+GGG | + | chr7.2:26589872-26589891 | MS.gene85463:CDS | 35.0% |
| AAAAGAGAGGTTACATACGC+TGG | - | chr7.2:26587550-26587569 | None:intergenic | 40.0% | |
| AACGATGAAGTTGTGAACTG+CGG | + | chr7.2:26589728-26589747 | MS.gene85463:CDS | 40.0% | |
| AAGAATAGCCCTGCATTACT+TGG | - | chr7.2:26589926-26589945 | None:intergenic | 40.0% | |
| ACTTGCTTACCAAGTAATGC+AGG | + | chr7.2:26589914-26589933 | MS.gene85463:CDS | 40.0% | |
| AGTTGTTGATATACTCCACC+AGG | + | chr7.2:26587805-26587824 | MS.gene85463:intron | 40.0% | |
| CTCCACCACTCATCAATATA+CGG | - | chr7.2:26587450-26587469 | None:intergenic | 40.0% | |
| CTGAATTCATTCACTCCTTC+TGG | - | chr7.2:26587202-26587221 | None:intergenic | 40.0% | |
| CTTGCTTACCAAGTAATGCA+GGG | + | chr7.2:26589915-26589934 | MS.gene85463:CDS | 40.0% | |
| GCTTTCGGATGACATATTTG+TGG | + | chr7.2:26589811-26589830 | MS.gene85463:CDS | 40.0% | |
| GCTTTGATCTGATTGAAGAG+TGG | + | chr7.2:26587143-26587162 | MS.gene85463:CDS | 40.0% | |
| GTAAAGCTTAATGTTTCGCC+GGG | + | chr7.2:26590025-26590044 | MS.gene85463:CDS | 40.0% | |
| GTTGTTCCTAAAGGGTTTGA+TGG | - | chr7.2:26589476-26589495 | None:intergenic | 40.0% | |
| TTCATGTCAAAAGTGAGAGG+TGG | + | chr7.2:26587403-26587422 | MS.gene85463:CDS | 40.0% | |
| TTTGAGCTATGACATTGGAC+AGG | - | chr7.2:26589362-26589381 | None:intergenic | 40.0% | |
| ! | GCGCTAATTAATTTGACAGC+AGG | + | chr7.2:26588637-26588656 | MS.gene85463:intron | 40.0% |
| ! | GTAATGCAGGGCTATTCTTT+TGG | + | chr7.2:26589927-26589946 | MS.gene85463:CDS | 40.0% |
| ! | TACTCCACCAGGTTTTTAAC+TGG | + | chr7.2:26587816-26587835 | MS.gene85463:intron | 40.0% |
| !!! | ATGTTTTGTTTGGCTGATCC+TGG | + | chr7.2:26587493-26587512 | MS.gene85463:CDS | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr7.2:26588591-26588610 | MS.gene85463:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+TGG | - | chr7.2:26588610-26588591 | None:intergenic | 40.0% |
| !!! | GCAGCGCGAATTTTTTACAA+AGG | + | chr7.2:26589871-26589890 | MS.gene85463:CDS | 40.0% |
| !!! | TGATCCTGGTGATGCTTTTT+TGG | + | chr7.2:26587507-26587526 | MS.gene85463:CDS | 40.0% |
| ACAAGTGGTGAATGAGGCAT+TGG | - | chr7.2:26590277-26590296 | None:intergenic | 45.0% | |
| ATTGACCATAGGGACCACAT+AGG | + | chr7.2:26589059-26589078 | MS.gene85463:intron | 45.0% | |
| CAAATCCTATGTGGTCCCTA+TGG | - | chr7.2:26589067-26589086 | None:intergenic | 45.0% | |
| CCACTCATCAATATACGGTC+AGG | - | chr7.2:26587445-26587464 | None:intergenic | 45.0% | |
| CCTGACCGTATATTGATGAG+TGG | + | chr7.2:26587442-26587461 | MS.gene85463:CDS | 45.0% | |
| GAATGAGGAGACATCCTATG+AGG | - | chr7.2:26590253-26590272 | None:intergenic | 45.0% | |
| GACAGGAATTAGTTGCACAC+CGG | - | chr7.2:26589345-26589364 | None:intergenic | 45.0% | |
| GACCGTATATTGATGAGTGG+TGG | + | chr7.2:26587445-26587464 | MS.gene85463:CDS | 45.0% | |
| GAGCAATTAAAAGCCGAACC+CGG | - | chr7.2:26590046-26590065 | None:intergenic | 45.0% | |
| GTACGTTGGTGTGTCGAAAA+CGG | - | chr7.2:26589585-26589604 | None:intergenic | 45.0% | |
| GTCAAAAGTGAGAGGTGGTA+GGG | + | chr7.2:26587408-26587427 | MS.gene85463:CDS | 45.0% | |
| TACGCTGGATAATAAGGGCT+AGG | - | chr7.2:26587535-26587554 | None:intergenic | 45.0% | |
| TCAAAAGACATGGGTCTTCC+AGG | + | chr7.2:26589677-26589696 | MS.gene85463:CDS | 45.0% | |
| TCAGCTACACTTACGTACGT+TGG | - | chr7.2:26589599-26589618 | None:intergenic | 45.0% | |
| TGTCAAAAGTGAGAGGTGGT+AGG | + | chr7.2:26587407-26587426 | MS.gene85463:CDS | 45.0% | |
| ! | GATTTGTCCGTGACTTGTGT+TGG | + | chr7.2:26589315-26589334 | MS.gene85463:intron | 45.0% |
| ! | TTAATTGCTCTGAGCCTGGT+TGG | + | chr7.2:26590056-26590075 | MS.gene85463:CDS | 45.0% |
| !! | ACCAAACCGACTCTAAAACC+TGG | - | chr7.2:26589698-26589717 | None:intergenic | 45.0% |
| !! | GAATGAGGCATTGGTGAATG+AGG | - | chr7.2:26590268-26590287 | None:intergenic | 45.0% |
| !! | GCTTTTAATTGCTCTGAGCC+TGG | + | chr7.2:26590052-26590071 | MS.gene85463:CDS | 45.0% |
| !! | GGAACCAAAAAAGCATCACC+AGG | - | chr7.2:26587514-26587533 | None:intergenic | 45.0% |
| !! | TATGTCATCCGAAAGCACTG+CGG | - | chr7.2:26589807-26589826 | None:intergenic | 45.0% |
| !! | TCCTTCTGGAGTGCAAATTG+AGG | - | chr7.2:26587188-26587207 | None:intergenic | 45.0% |
| !! | TTTTCTAGCCGCAGTGCTTT+CGG | + | chr7.2:26589796-26589815 | MS.gene85463:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr7.2:26588590-26588609 | MS.gene85463:intron | 45.0% |
| !!! | GGTCTTCCAGGTTTTAGAGT+CGG | + | chr7.2:26589689-26589708 | MS.gene85463:CDS | 45.0% |
| !!! | TCCAGGTTTTAGAGTCGGTT+TGG | + | chr7.2:26589694-26589713 | MS.gene85463:CDS | 45.0% |
| !! | TCTTTAATAAAAAATAAAAA+TGG | + | chr7.2:26588108-26588127 | MS.gene85463:intron | 5.0% |
| !!! | TTTTTTTTTAAAAAAGATAT+AGG | - | chr7.2:26587907-26587926 | None:intergenic | 5.0% |
| CGGTTCTCCAACACAAGTCA+CGG | - | chr7.2:26589325-26589344 | None:intergenic | 50.0% | |
| GCCTCAATTTGCACTCCAGA+AGG | + | chr7.2:26587184-26587203 | MS.gene85463:CDS | 50.0% | |
| GCTCGAACAAGTGGTGAATG+AGG | - | chr7.2:26590283-26590302 | None:intergenic | 50.0% | |
| GCTTAATGTTTCGCCGGGTT+CGG | + | chr7.2:26590030-26590049 | MS.gene85463:CDS | 50.0% | |
| GGAGTGCAAATTGAGGCCTT+TGG | - | chr7.2:26587181-26587200 | None:intergenic | 50.0% | |
| ! | CGTGACTTGTGTTGGAGAAC+CGG | + | chr7.2:26589323-26589342 | MS.gene85463:CDS | 50.0% |
| ! | TTGATGAGTGGTGGAGCAAC+AGG | + | chr7.2:26587454-26587473 | MS.gene85463:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 26587139 | 26590309 | 26587139 | ID=MS.gene85463 |
| chr7.2 | mRNA | 26587139 | 26590309 | 26587139 | ID=MS.gene85463.t1;Parent=MS.gene85463 |
| chr7.2 | exon | 26587139 | 26587270 | 26587139 | ID=MS.gene85463.t1.exon1;Parent=MS.gene85463.t1 |
| chr7.2 | CDS | 26587139 | 26587270 | 26587139 | ID=cds.MS.gene85463.t1;Parent=MS.gene85463.t1 |
| chr7.2 | exon | 26587391 | 26587551 | 26587391 | ID=MS.gene85463.t1.exon2;Parent=MS.gene85463.t1 |
| chr7.2 | CDS | 26587391 | 26587551 | 26587391 | ID=cds.MS.gene85463.t1;Parent=MS.gene85463.t1 |
| chr7.2 | exon | 26589316 | 26590309 | 26589316 | ID=MS.gene85463.t1.exon3;Parent=MS.gene85463.t1 |
| chr7.2 | CDS | 26589316 | 26590309 | 26589316 | ID=cds.MS.gene85463.t1;Parent=MS.gene85463.t1 |
| Gene Sequence |
| Protein sequence |
