AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89382


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89382.t1 MTR_2g008220 73.673 471 122 2 1 470 1 470 0.0 727
MS.gene89382.t1 MTR_2g008225 73.093 472 124 3 1 470 1 471 0.0 719
MS.gene89382.t1 MTR_6g036650 68.803 468 142 3 6 470 10 476 0.0 662
MS.gene89382.t1 MTR_2g046620 64.346 474 158 7 1 470 1 467 0.0 629
MS.gene89382.t1 MTR_6g042310 64.286 476 157 6 1 470 1 469 0.0 619
MS.gene89382.t1 MTR_4g123553 62.447 474 166 6 1 470 1 466 0.0 609
MS.gene89382.t1 MTR_4g077960 65.111 450 148 6 23 470 1 443 0.0 594
MS.gene89382.t1 MTR_3g435310 57.023 477 146 8 1 470 1 425 0.0 523
MS.gene89382.t1 MTR_2g008226 55.032 467 193 8 11 464 7 469 0.0 521
MS.gene89382.t1 MTR_8g068360 39.167 480 268 8 1 467 1 469 4.29e-115 347
MS.gene89382.t1 MTR_8g068330 39.827 462 261 8 8 458 2 457 6.58e-115 346
MS.gene89382.t1 MTR_8g068340 38.511 470 268 8 1 458 1 461 1.18e-108 330
MS.gene89382.t1 MTR_7g067330 39.294 453 242 7 7 458 2 422 3.31e-107 325
MS.gene89382.t1 MTR_7g067120 38.852 453 244 7 7 458 2 422 1.96e-104 318
MS.gene89382.t1 MTR_8g007650 36.443 461 277 10 13 461 6 462 4.94e-94 292
MS.gene89382.t1 MTR_8g007565 36.226 461 278 10 13 461 6 462 3.80e-93 290
MS.gene89382.t1 MTR_5g066410 34.632 462 261 12 17 461 1 438 1.04e-81 260
MS.gene89382.t1 MTR_4g079270 33.895 475 275 17 8 463 2 456 7.22e-67 222
MS.gene89382.t1 MTR_4g079250 35.021 474 263 19 12 463 6 456 9.10e-66 219
MS.gene89382.t1 MTR_2g014900 32.174 460 288 13 13 461 6 452 2.75e-63 212
MS.gene89382.t1 MTR_1g090270 30.538 465 290 12 13 461 14 461 1.31e-55 192
MS.gene89382.t1 MTR_2g083430 31.681 464 290 15 12 462 6 455 1.55e-52 184
MS.gene89382.t1 MTR_2g083480 30.193 467 301 14 8 462 2 455 1.58e-48 173
MS.gene89382.t1 MTR_2g083380 31.866 477 272 17 13 463 24 473 1.84e-47 171
MS.gene89382.t1 MTR_2g083490 31.144 472 282 18 13 463 7 456 2.06e-46 167
MS.gene89382.t1 MTR_2g083420 28.602 465 287 17 8 462 2 431 6.88e-43 157
MS.gene89382.t1 MTR_4g031800 29.374 463 277 18 11 442 6 449 1.30e-41 155
MS.gene89382.t1 MTR_2g083390 27.312 465 293 17 8 462 2 431 1.69e-40 150
MS.gene89382.t1 MTR_4g485630 27.273 473 289 17 4 443 1 451 4.17e-36 139
MS.gene89382.t1 MTR_5g045960 28.785 469 286 17 11 443 6 462 5.07e-36 139
MS.gene89382.t1 MTR_7g102450 26.856 458 288 14 14 443 11 449 1.84e-34 135
MS.gene89382.t1 MTR_7g102460 29.279 444 254 19 13 415 8 432 2.45e-34 135
MS.gene89382.t1 MTR_7g102490 30.464 453 255 18 4 415 1 434 6.72e-34 134
MS.gene89382.t1 MTR_8g009055 27.371 464 284 16 10 442 2 443 7.17e-34 133
MS.gene89382.t1 MTR_6g023665 28.097 452 282 13 15 441 14 447 4.31e-33 131
MS.gene89382.t1 MTR_4g117980 25.586 469 296 16 10 442 7 458 4.81e-33 131
MS.gene89382.t1 MTR_3g008010 27.004 474 293 18 4 443 1 455 4.87e-33 130
MS.gene89382.t1 MTR_7g117405 27.922 462 283 17 14 443 12 455 5.76e-33 130
MS.gene89382.t1 MTR_2g035020 28.337 427 258 16 10 407 7 414 7.46e-33 130
MS.gene89382.t1 MTR_0036s0220 29.291 437 260 16 14 415 12 434 2.33e-32 129
MS.gene89382.t1 MTR_1g107350 27.349 479 301 17 10 456 4 467 4.02e-32 128
MS.gene89382.t1 MTR_4g059370 30.769 312 186 12 165 461 92 388 8.51e-32 125
MS.gene89382.t1 MTR_8g066610 26.265 514 309 18 1 469 1 489 9.43e-32 127
MS.gene89382.t1 MTR_1g107375 26.261 476 289 15 13 456 7 452 1.37e-31 126
MS.gene89382.t1 MTR_2g034990 26.636 428 264 14 10 407 7 414 1.58e-31 127
MS.gene89382.t1 MTR_3g479520 28.329 413 245 15 10 387 12 408 1.65e-31 126
MS.gene89382.t1 MTR_8g008990 28.481 474 268 17 10 442 2 445 2.75e-31 125
MS.gene89382.t1 MTR_4g117950 25.380 461 293 13 11 443 3 440 2.85e-31 125
MS.gene89382.t1 MTR_8g006220 27.517 447 268 16 15 425 7 433 3.04e-31 125
MS.gene89382.t1 MTR_4g117960 26.068 468 292 19 11 442 8 457 4.28e-31 125
MS.gene89382.t1 MTR_0536s0010 25.105 478 290 18 2 443 9 454 4.30e-31 125
MS.gene89382.t1 MTR_6g488280 27.706 462 271 15 15 441 7 440 6.52e-31 124
MS.gene89382.t1 MTR_0428s0010 27.706 462 271 15 15 441 7 440 6.52e-31 124
MS.gene89382.t1 MTR_8g009050 26.667 465 286 16 10 442 2 443 2.41e-30 123
MS.gene89382.t1 MTR_5g035560 25.052 479 304 15 4 458 1 448 2.58e-30 123
MS.gene89382.t1 MTR_3g079480 27.872 470 270 20 10 437 18 460 4.38e-30 122
MS.gene89382.t1 MTR_7g070800 27.295 403 263 12 13 396 5 396 4.42e-30 122
MS.gene89382.t1 MTR_1g019510 25.380 461 296 12 10 443 2 441 4.52e-30 122
MS.gene89382.t1 MTR_0009s0240 27.119 413 258 13 14 403 7 399 4.68e-30 122
MS.gene89382.t1 MTR_3g049970 26.793 474 306 15 12 456 7 468 6.04e-30 122
MS.gene89382.t1 MTR_5g035580 25.738 474 287 17 13 455 12 451 1.15e-29 121
MS.gene89382.t1 MTR_8g032950 24.180 488 286 16 7 442 2 457 1.20e-29 121
MS.gene89382.t1 MTR_5g087620 26.439 469 305 17 7 441 3 465 1.21e-29 121
MS.gene89382.t1 MTR_8g009063 25.325 462 296 14 11 443 10 451 1.26e-29 121
MS.gene89382.t1 MTR_8g465670 27.563 439 270 16 15 425 8 426 1.35e-29 121
MS.gene89382.t1 MTR_7g012120 24.204 471 311 15 3 442 5 460 2.59e-29 120
MS.gene89382.t1 MTR_8g006730 25.806 465 286 16 11 441 3 442 2.99e-29 120
MS.gene89382.t1 MTR_6g013440 26.050 476 287 17 8 442 6 457 3.94e-29 120
MS.gene89382.t1 MTR_8g071070 26.033 484 310 15 14 466 7 473 5.20e-29 119
MS.gene89382.t1 MTR_7g071050 25.361 485 284 18 1 462 1 430 7.90e-29 118
MS.gene89382.t1 MTR_6g014220 26.514 479 283 17 6 442 3 454 7.94e-29 119
MS.gene89382.t1 MTR_5g029800 24.228 421 277 13 11 407 8 410 1.07e-28 118
MS.gene89382.t1 MTR_6g038240 25.561 446 280 17 14 437 11 426 1.13e-28 118
MS.gene89382.t1 MTR_6g014290 25.690 471 297 17 6 442 3 454 1.29e-28 118
MS.gene89382.t1 MTR_4g485590 28.148 405 244 13 14 404 9 380 1.31e-28 117
MS.gene89382.t1 MTR_7g070780 27.033 418 262 14 6 396 3 404 1.43e-28 118
MS.gene89382.t1 MTR_7g117170 26.834 477 304 11 10 457 11 471 1.51e-28 118
MS.gene89382.t1 MTR_7g102560 28.541 466 282 22 13 441 8 459 1.64e-28 118
MS.gene89382.t1 MTR_5g464810 27.880 434 256 19 14 409 12 426 1.95e-28 117
MS.gene89382.t1 MTR_5g064240 27.880 434 256 19 14 409 12 426 1.95e-28 117
MS.gene89382.t1 MTR_7g102550 27.673 477 296 18 14 456 9 470 2.02e-28 117
MS.gene89382.t1 MTR_7g070860 26.551 403 256 14 11 396 4 383 2.86e-28 117
MS.gene89382.t1 MTR_5g067170 21.795 468 313 10 10 442 7 456 3.79e-28 117
MS.gene89382.t1 MTR_7g071040 26.611 481 295 17 3 443 6 468 4.27e-28 117
MS.gene89382.t1 MTR_8g027870 27.212 452 292 12 12 443 16 450 5.42e-28 116
MS.gene89382.t1 MTR_8g064870 25.304 494 324 14 7 468 4 484 5.57e-28 116
MS.gene89382.t1 MTR_7g070930 27.314 443 271 15 1 412 1 423 7.79e-28 116
MS.gene89382.t1 MTR_8g006710 26.464 461 288 16 10 441 3 441 8.42e-28 115
MS.gene89382.t1 MTR_0184s0040 26.316 456 292 13 11 440 18 455 1.44e-27 115
MS.gene89382.t1 MTR_0078s0190 26.316 456 292 13 11 440 18 455 1.44e-27 115
MS.gene89382.t1 MTR_3g479470 27.438 441 276 14 10 417 10 439 1.56e-27 115
MS.gene89382.t1 MTR_6g038230 24.477 478 303 15 14 464 11 457 1.59e-27 115
MS.gene89382.t1 MTR_7g070660 26.170 470 280 19 13 440 10 454 1.88e-27 115
MS.gene89382.t1 MTR_4g024020 29.691 421 251 19 13 403 8 413 2.08e-27 115
MS.gene89382.t1 MTR_7g070610 25.265 471 294 16 13 443 12 464 2.62e-27 114
MS.gene89382.t1 MTR_0288s0020 26.115 471 278 17 6 442 3 437 2.67e-27 114
MS.gene89382.t1 MTR_4g118000 26.128 421 267 15 10 412 8 402 2.74e-27 114
MS.gene89382.t1 MTR_8g027885 27.313 454 289 14 12 443 16 450 2.82e-27 114
MS.gene89382.t1 MTR_1g107315 26.282 468 312 12 14 456 8 467 3.17e-27 114
MS.gene89382.t1 MTR_5g464760 27.851 456 269 18 14 423 12 453 3.49e-27 114
MS.gene89382.t1 MTR_0078s0060 26.439 469 294 14 11 448 3 451 3.87e-27 114
MS.gene89382.t1 MTR_5g045970 26.105 475 299 17 13 449 15 475 4.50e-27 114
MS.gene89382.t1 MTR_7g102520 28.250 400 251 11 13 387 11 399 4.53e-27 114
MS.gene89382.t1 MTR_0078s0010 26.304 460 287 16 11 440 3 440 4.59e-27 114
MS.gene89382.t1 MTR_8g009067 25.597 461 302 12 10 446 2 445 6.16e-27 113
MS.gene89382.t1 MTR_7g047030 26.039 457 292 15 11 440 3 440 6.71e-27 113
MS.gene89382.t1 MTR_7g047270 26.039 457 292 15 11 440 3 440 6.71e-27 113
MS.gene89382.t1 MTR_8g008970 24.726 457 311 10 10 446 2 445 1.33e-26 114
MS.gene89382.t1 MTR_8g008970 31.707 205 131 4 240 443 570 766 6.21e-20 93.6
MS.gene89382.t1 MTR_8g009073 24.348 460 309 10 10 446 2 445 1.81e-26 112
MS.gene89382.t1 MTR_4g117890 24.706 425 273 14 7 407 6 407 2.01e-26 112
MS.gene89382.t1 MTR_1g032490 25.636 472 320 13 13 460 9 473 2.14e-26 112
MS.gene89382.t1 MTR_1g062380 25.546 458 294 15 13 434 15 461 2.25e-26 112
MS.gene89382.t1 MTR_2g098430 25.702 463 294 19 15 444 7 452 2.31e-26 112
MS.gene89382.t1 MTR_6g035185 22.833 473 311 15 10 447 7 460 4.34e-26 111
MS.gene89382.t1 MTR_3g479490 24.946 465 299 17 11 442 3 450 4.48e-26 110
MS.gene89382.t1 MTR_7g070810 26.652 469 291 18 7 441 2 451 4.81e-26 110
MS.gene89382.t1 MTR_1g019520 34.409 186 108 1 272 443 5 190 4.82e-26 105
MS.gene89382.t1 MTR_8g012745 34.171 199 112 4 260 443 252 446 5.07e-26 110
MS.gene89382.t1 MTR_7g070940 26.797 459 298 17 7 440 2 447 5.49e-26 110
MS.gene89382.t1 MTR_1g107285 25.314 478 303 16 12 456 6 462 6.03e-26 110
MS.gene89382.t1 MTR_2g083360 23.246 456 234 14 12 462 27 371 7.95e-26 108
MS.gene89382.t1 MTR_7g070910 26.995 426 253 14 6 396 3 405 9.90e-26 110
MS.gene89382.t1 MTR_6g014250 24.891 458 304 15 14 443 10 455 1.00e-25 110
MS.gene89382.t1 MTR_7g046490 25.054 463 281 12 14 440 6 438 1.06e-25 109
MS.gene89382.t1 MTR_6g014040 25.532 470 302 17 6 442 3 457 1.74e-25 109
MS.gene89382.t1 MTR_8g012635 32.489 237 128 7 224 440 222 446 2.27e-25 108
MS.gene89382.t1 MTR_2g059240 25.058 431 289 10 14 420 13 433 2.59e-25 108
MS.gene89382.t1 MTR_7g055710 25.908 413 259 15 13 396 10 404 2.75e-25 108
MS.gene89382.t1 MTR_7g080935 25.486 463 308 17 13 461 10 449 3.98e-25 108
MS.gene89382.t1 MTR_3g009510 25.054 463 300 15 15 442 6 456 4.27e-25 108
MS.gene89382.t1 MTR_4g094220 24.301 465 300 16 14 442 7 455 4.77e-25 107
MS.gene89382.t1 MTR_6g013990 25.474 475 293 18 6 442 3 454 5.86e-25 107
MS.gene89382.t1 MTR_1g107365 25.000 480 293 16 12 456 43 490 6.66e-25 107
MS.gene89382.t1 MTR_5g019580 26.585 489 278 16 11 449 4 461 7.43e-25 107
MS.gene89382.t1 MTR_0536s0020 24.615 390 270 8 5 382 9 386 8.63e-25 107
MS.gene89382.t1 MTR_7g080900 24.619 459 292 16 11 435 9 447 8.76e-25 107
MS.gene89382.t1 MTR_5g016660 26.176 489 276 23 7 441 2 459 1.90e-24 106
MS.gene89382.t1 MTR_6g035265 22.151 465 315 13 10 447 7 451 2.18e-24 105
MS.gene89382.t1 MTR_8g009067 31.364 220 133 4 240 446 113 327 2.65e-24 103
MS.gene89382.t1 MTR_5g019580 32.900 231 130 6 238 449 261 485 3.44e-24 105
MS.gene89382.t1 MTR_8g074550 25.662 491 278 18 8 442 2 461 3.52e-24 105
MS.gene89382.t1 MTR_4g108250 23.739 476 306 15 1 440 1 455 3.92e-24 105
MS.gene89382.t1 MTR_6g038300 22.521 484 310 16 6 458 3 452 3.94e-24 105
MS.gene89382.t1 MTR_2g008210 25.800 469 294 15 9 443 6 454 4.03e-24 105
MS.gene89382.t1 MTR_8g012730 33.838 198 112 4 261 440 87 283 4.51e-24 102
MS.gene89382.t1 MTR_8g064880 24.236 458 302 13 10 437 5 447 5.12e-24 105
MS.gene89382.t1 MTR_6g038200 24.792 480 297 16 14 463 11 456 6.19e-24 104
MS.gene89382.t1 MTR_7g070740 25.346 434 280 15 6 412 3 419 6.55e-24 104
MS.gene89382.t1 MTR_8g088560 24.374 439 304 13 13 439 9 431 8.16e-24 103
MS.gene89382.t1 MTR_7g013180 25.696 467 295 16 14 458 5 441 1.90e-23 102
MS.gene89382.t1 MTR_1g107360 24.000 475 310 15 12 458 7 458 3.00e-23 102
MS.gene89382.t1 MTR_0184s0030 32.787 183 107 3 273 440 261 442 3.09e-23 102
MS.gene89382.t1 MTR_8g009073 31.500 200 121 3 260 446 120 316 3.59e-23 100
MS.gene89382.t1 MTR_1g040310 25.121 414 258 15 13 396 14 405 3.63e-23 102
MS.gene89382.t1 MTR_5g072810 24.330 485 301 20 5 459 3 451 3.99e-23 102
MS.gene89382.t1 MTR_6g014270 25.106 470 290 17 14 442 7 455 4.00e-23 102
MS.gene89382.t1 MTR_8g012650 30.380 237 133 7 224 440 222 446 4.11e-23 102
MS.gene89382.t1 MTR_8g012630 33.333 186 105 4 273 440 206 390 4.43e-23 101
MS.gene89382.t1 MTR_6g014020 25.051 495 267 18 9 442 5 456 4.97e-23 102
MS.gene89382.t1 MTR_7g070870 26.601 406 256 15 11 395 16 400 8.93e-23 101
MS.gene89382.t1 MTR_4g485620 25.055 455 281 17 26 443 1 432 1.05e-22 100
MS.gene89382.t1 MTR_6g014170 25.208 480 283 17 1 444 1 440 1.07e-22 100
MS.gene89382.t1 MTR_6g013960 24.573 468 302 18 10 443 7 457 1.07e-22 100
MS.gene89382.t1 MTR_6g013450 24.468 470 292 16 14 442 10 457 1.23e-22 100
MS.gene89382.t1 MTR_6g038220 23.750 480 301 15 14 463 11 455 1.60e-22 100
MS.gene89382.t1 MTR_8g006270 30.417 240 144 6 217 438 202 436 1.75e-22 100
MS.gene89382.t1 MTR_6g033625 24.336 452 289 18 15 435 5 434 5.38e-22 99.0
MS.gene89382.t1 MTR_1g090280 37.222 180 101 5 293 461 133 311 6.21e-22 96.7
MS.gene89382.t1 MTR_6g005600 26.448 397 245 12 60 430 57 432 1.02e-21 98.2
MS.gene89382.t1 MTR_4g128690 31.395 258 140 8 178 434 200 421 3.19e-21 96.3
MS.gene89382.t1 MTR_7g011470 25.591 465 281 18 10 442 7 438 3.92e-21 96.3
MS.gene89382.t1 MTR_8g077590 32.663 199 117 4 255 440 247 441 4.72e-21 95.9
MS.gene89382.t1 MTR_7g011470 24.945 457 298 15 10 442 7 442 5.00e-21 95.9
MS.gene89382.t1 MTR_6g033615 31.980 197 127 4 244 434 224 419 6.62e-21 95.5
MS.gene89382.t1 MTR_8g006260 29.961 257 147 7 218 451 209 455 6.82e-21 95.5
MS.gene89382.t1 MTR_6g011340 25.474 475 290 20 9 442 5 456 8.54e-21 95.1
MS.gene89382.t1 MTR_7g080940 23.629 474 312 18 13 462 10 457 1.06e-20 94.7
MS.gene89382.t1 MTR_4g128720 26.957 460 249 16 13 434 14 424 1.17e-20 94.7
MS.gene89382.t1 MTR_5g058320 23.503 451 304 14 14 442 10 441 1.29e-20 94.7
MS.gene89382.t1 MTR_0891s0010 28.226 248 149 8 211 442 32 266 1.97e-20 91.7
MS.gene89382.t1 MTR_5g090610 29.644 253 142 10 216 441 193 436 3.68e-20 93.2
MS.gene89382.t1 MTR_6g033660 24.612 451 298 12 15 440 5 438 3.73e-20 93.2
MS.gene89382.t1 MTR_6g014200 25.322 466 292 17 14 442 7 453 3.90e-20 93.2
MS.gene89382.t1 MTR_6g014187 23.124 493 288 18 6 444 3 458 4.89e-20 93.2
MS.gene89382.t1 MTR_5g090630 25.367 477 275 19 11 442 2 442 5.24e-20 92.8
MS.gene89382.t1 MTR_6g013900 23.932 468 299 18 14 444 10 457 6.45e-20 92.8
MS.gene89382.t1 MTR_6g014050 25.586 469 287 17 14 442 11 457 6.63e-20 92.4
MS.gene89382.t1 MTR_5g040030 24.116 481 299 19 6 442 6 464 6.70e-20 92.8
MS.gene89382.t1 MTR_8g083290 23.591 479 297 17 12 448 2 453 1.20e-19 91.7
MS.gene89382.t1 MTR_2g035040 30.415 217 127 8 250 442 147 363 1.33e-19 90.9
MS.gene89382.t1 MTR_1g107380 27.273 352 225 12 129 460 134 474 1.38e-19 91.7
MS.gene89382.t1 MTR_4g485640 26.042 384 231 16 24 382 219 574 1.44e-19 92.0
MS.gene89382.t1 MTR_6g035295 23.832 428 249 15 13 396 11 405 1.57e-19 91.7
MS.gene89382.t1 MTR_4g008630 27.568 185 121 3 273 445 259 442 1.82e-19 91.3
MS.gene89382.t1 MTR_6g014310 24.947 469 290 15 14 442 11 457 1.82e-19 91.3
MS.gene89382.t1 MTR_6g033725 29.557 203 136 3 244 440 235 436 1.94e-19 91.3
MS.gene89382.t1 MTR_5g090580 29.804 255 141 11 216 442 207 451 4.70e-19 90.1
MS.gene89382.t1 MTR_8g466240 24.784 464 278 18 14 439 8 438 5.69e-19 89.7
MS.gene89382.t1 MTR_3g479610 28.077 260 163 9 220 462 62 314 6.53e-19 87.8
MS.gene89382.t1 MTR_8g044140 26.667 390 225 16 43 396 6 370 6.75e-19 89.4
MS.gene89382.t1 MTR_4g064987 25.055 451 284 17 15 445 9 425 8.23e-19 89.0
MS.gene89382.t1 MTR_6g033675 38.028 142 82 3 272 407 266 407 1.22e-18 88.6
MS.gene89382.t1 MTR_5g090660 30.830 253 141 11 216 442 205 449 1.24e-18 89.0
MS.gene89382.t1 MTR_6g014150 24.940 417 256 14 10 387 4 402 1.63e-18 88.2
MS.gene89382.t1 MTR_7g013240 25.059 427 267 18 14 421 6 398 1.72e-18 88.2
MS.gene89382.t1 MTR_5g039900 23.651 482 283 21 13 442 12 460 2.27e-18 87.8
MS.gene89382.t1 MTR_4g064987 24.622 463 277 19 15 445 9 431 2.85e-18 87.4
MS.gene89382.t1 MTR_7g080950 22.961 466 325 15 13 464 5 450 3.53e-18 87.0
MS.gene89382.t1 MTR_2g046750 22.270 467 298 15 13 442 4 442 5.72e-18 86.7
MS.gene89382.t1 MTR_1g029540 25.806 186 125 3 273 446 256 440 6.15e-18 86.3
MS.gene89382.t1 MTR_5g098930 24.375 480 278 20 11 442 2 444 7.23e-18 86.3
MS.gene89382.t1 MTR_5g027210 22.566 452 243 13 15 397 5 418 1.25e-17 85.5
MS.gene89382.t1 MTR_7g013260 23.608 449 287 18 14 441 6 419 1.37e-17 85.1
MS.gene89382.t1 MTR_6g014240 23.368 475 290 16 11 443 4 446 1.62e-17 85.1
MS.gene89382.t1 MTR_8g059425 30.058 173 112 4 273 442 288 454 1.68e-17 85.1
MS.gene89382.t1 MTR_8g090095 28.959 221 137 5 258 459 258 477 2.01e-17 85.1
MS.gene89382.t1 MTR_5g090620 32.653 196 106 6 270 442 260 452 2.79e-17 84.7
MS.gene89382.t1 MTR_6g014190 26.695 236 151 6 221 444 40 265 3.22e-17 82.4
MS.gene89382.t1 MTR_7g470610 34.416 154 93 4 272 418 133 285 3.54e-17 82.4
MS.gene89382.t1 MTR_7g070583 34.416 154 93 4 272 418 133 285 3.54e-17 82.4
MS.gene89382.t1 MTR_6g013920 25.270 463 299 15 14 444 10 457 4.98e-17 84.0
MS.gene89382.t1 MTR_2g046820 29.167 240 147 8 220 442 206 439 6.35e-17 83.2
MS.gene89382.t1 MTR_3g009490 33.133 166 91 4 297 442 3 168 6.41e-17 79.3
MS.gene89382.t1 MTR_5g072860 22.737 453 306 17 14 446 18 446 7.61e-17 83.2
MS.gene89382.t1 MTR_5g072830 22.785 474 319 19 5 459 1 446 9.14e-17 82.8
MS.gene89382.t1 MTR_5g090600 29.339 242 142 12 216 442 203 430 1.16e-16 82.4
MS.gene89382.t1 MTR_5g004940 30.814 172 109 3 273 435 199 369 1.20e-16 82.0
MS.gene89382.t1 MTR_3g084520 22.566 452 313 15 14 439 6 446 3.73e-16 80.9
MS.gene89382.t1 MTR_5g090670 27.309 249 149 8 220 442 211 453 4.00e-16 80.9
MS.gene89382.t1 MTR_3g084540 22.601 469 293 15 14 439 6 447 5.70e-16 80.5
MS.gene89382.t1 MTR_7g013200 23.129 441 299 14 14 441 5 418 6.35e-16 80.1
MS.gene89382.t1 MTR_4g114260 54.412 68 29 2 87 154 1 66 6.87e-16 72.8
MS.gene89382.t1 MTR_1g061740 54.412 68 29 2 87 154 1 66 6.87e-16 72.8
MS.gene89382.t1 MTR_5g090700 29.952 207 118 6 217 403 210 409 8.62e-16 80.1
MS.gene89382.t1 MTR_5g072820 24.236 458 300 18 5 445 1 428 1.07e-15 79.3
MS.gene89382.t1 MTR_7g013220 23.721 430 273 14 14 417 5 405 1.26e-15 79.3
MS.gene89382.t1 MTR_5g016480 29.057 265 163 10 216 458 210 471 1.76e-15 79.0
MS.gene89382.t1 MTR_2g040530 25.566 309 203 9 111 403 105 402 3.88e-15 77.8
MS.gene89382.t1 MTR_5g090690 35.374 147 75 5 243 374 166 307 9.66e-15 76.3
MS.gene89382.t1 MTR_8g009840 31.250 160 93 1 287 429 332 491 1.48e-14 76.3
MS.gene89382.t1 MTR_0477s0010 28.249 177 120 3 268 442 122 293 2.67e-14 74.3
MS.gene89382.t1 MTR_8g007585 28.902 173 114 4 273 442 202 368 4.52e-14 74.3
MS.gene89382.t1 MTR_7g039550 29.817 218 128 9 247 442 24 238 7.34e-14 72.0
MS.gene89382.t1 MTR_3g031400 22.603 438 299 15 14 441 18 425 1.16e-13 73.2
MS.gene89382.t1 MTR_8g043470 27.485 171 115 4 273 440 188 352 1.49e-13 72.4
MS.gene89382.t1 MTR_2g086283 29.091 165 95 4 304 463 187 334 2.86e-13 71.2
MS.gene89382.t1 MTR_2g086283 34.074 135 82 5 17 149 1 130 2.26e-12 68.6
MS.gene89382.t1 MTR_3g069690 28.649 185 117 6 272 447 256 434 3.32e-13 72.0
MS.gene89382.t1 MTR_5g098960 33.858 127 78 4 273 396 262 385 1.23e-12 70.1
MS.gene89382.t1 MTR_5g070040 27.861 201 135 7 220 411 215 414 2.02e-12 69.3
MS.gene89382.t1 MTR_4g082810 30.247 162 101 5 242 396 240 396 2.85e-12 68.6
MS.gene89382.t1 MTR_4g082820 28.947 190 120 5 220 396 207 394 4.64e-12 68.2
MS.gene89382.t1 MTR_3g031450 27.074 229 151 7 220 440 206 426 1.41e-11 66.6
MS.gene89382.t1 MTR_5g070090 26.360 239 148 9 220 442 215 441 1.43e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89382.t1 AT2G22590 40.725 469 259 11 8 465 10 470 1.11e-117 353
MS.gene89382.t1 AT5G65550 38.248 468 260 9 10 461 5 459 2.31e-112 340
MS.gene89382.t1 AT5G49690 38.681 455 263 7 13 462 9 452 4.97e-109 331
MS.gene89382.t1 AT3G29630 31.458 480 271 15 13 470 5 448 1.61e-60 204
MS.gene89382.t1 AT2G22930 31.410 468 277 14 13 466 5 442 2.70e-60 204
MS.gene89382.t1 AT4G09500 30.753 465 278 13 13 463 5 439 2.68e-57 196
MS.gene89382.t1 AT5G53990 31.441 458 282 11 13 462 5 438 6.95e-57 195
MS.gene89382.t1 AT3G29630 30.672 476 254 15 13 470 5 422 8.68e-57 194
MS.gene89382.t1 AT4G27570 31.224 474 275 16 9 462 2 444 3.27e-54 188
MS.gene89382.t1 AT1G64910 31.602 462 278 13 11 461 3 437 6.39e-54 187
MS.gene89382.t1 AT1G64920 29.487 468 287 14 9 461 2 441 1.45e-53 186
MS.gene89382.t1 AT4G09500 29.806 463 260 12 13 463 5 414 2.08e-52 182
MS.gene89382.t1 AT4G27560 30.444 473 280 16 9 462 2 444 8.95e-52 182
MS.gene89382.t1 AT5G54010 30.454 463 288 17 13 463 5 445 1.15e-51 181
MS.gene89382.t1 AT1G50580 29.701 468 276 14 13 461 5 438 1.94e-50 178
MS.gene89382.t1 AT5G54060 29.130 460 298 15 13 457 12 458 5.67e-47 169
MS.gene89382.t1 AT4G34131 26.477 491 315 16 5 459 1 481 5.02e-39 147
MS.gene89382.t1 AT3G53150 30.000 460 272 20 1 423 10 456 7.24e-39 147
MS.gene89382.t1 AT2G15490 26.471 476 285 16 10 443 3 455 3.42e-36 140
MS.gene89382.t1 AT2G15490 26.514 479 284 17 10 443 3 458 3.74e-35 137
MS.gene89382.t1 AT2G15480 26.680 506 286 16 5 447 1 484 2.53e-34 134
MS.gene89382.t1 AT4G34135 27.098 417 256 15 11 397 8 406 3.25e-34 134
MS.gene89382.t1 AT3G53160 27.292 480 294 18 12 455 6 466 5.63e-34 134
MS.gene89382.t1 AT1G51210 27.955 440 279 13 14 441 20 433 1.07e-33 132
MS.gene89382.t1 AT2G15480 25.875 514 290 14 5 447 1 494 2.32e-33 132
MS.gene89382.t1 AT2G36800 27.952 415 269 15 4 396 1 407 3.01e-32 129
MS.gene89382.t1 AT3G50740 26.452 465 284 15 14 442 7 449 1.91e-31 126
MS.gene89382.t1 AT2G36750 27.725 422 260 17 10 406 6 407 3.77e-31 125
MS.gene89382.t1 AT2G36780 28.747 407 256 18 13 396 13 408 6.69e-31 125
MS.gene89382.t1 AT4G15490 25.873 487 317 15 8 465 2 473 1.06e-30 124
MS.gene89382.t1 AT1G22340 26.494 502 308 19 1 463 1 480 1.44e-30 124
MS.gene89382.t1 AT2G36760 27.184 412 258 15 12 396 12 408 1.53e-30 124
MS.gene89382.t1 AT4G34138 25.202 496 312 20 13 466 10 488 3.30e-30 123
MS.gene89382.t1 AT5G03490 25.858 437 280 13 8 422 13 427 3.95e-30 122
MS.gene89382.t1 AT5G14860 26.350 463 290 17 14 443 8 452 5.25e-30 122
MS.gene89382.t1 AT2G36770 27.670 412 256 17 12 396 12 408 7.14e-30 122
MS.gene89382.t1 AT1G22360 26.216 473 296 16 14 452 10 463 1.66e-29 120
MS.gene89382.t1 AT1G22400 27.038 503 306 20 1 464 1 481 3.19e-29 120
MS.gene89382.t1 AT2G16890 26.709 468 273 19 14 443 9 444 3.89e-29 119
MS.gene89382.t1 AT4G36770 26.856 458 287 11 13 442 3 440 4.63e-29 119
MS.gene89382.t1 AT1G01420 27.511 458 292 13 8 442 6 446 6.86e-29 119
MS.gene89382.t1 AT1G01420 27.511 458 292 13 8 442 3 443 7.92e-29 119
MS.gene89382.t1 AT5G12890 26.025 488 271 18 11 444 7 458 1.18e-28 118
MS.gene89382.t1 AT1G22360 26.964 471 290 17 14 444 10 466 1.53e-28 118
MS.gene89382.t1 AT2G31790 26.160 474 299 20 14 461 8 456 1.59e-28 117
MS.gene89382.t1 AT1G05680 23.355 471 314 17 14 461 6 452 2.49e-28 117
MS.gene89382.t1 AT1G22380 26.316 475 300 17 1 443 1 457 7.18e-28 116
MS.gene89382.t1 AT4G15500 26.411 443 292 16 14 438 9 435 1.70e-26 112
MS.gene89382.t1 AT1G05675 23.395 483 299 18 14 461 6 452 3.32e-26 111
MS.gene89382.t1 AT2G36790 26.355 406 269 12 12 396 11 407 3.54e-26 111
MS.gene89382.t1 AT1G10400 24.779 452 301 14 13 443 6 439 7.61e-26 110
MS.gene89382.t1 AT5G66690 25.546 458 286 11 14 440 7 440 1.28e-25 109
MS.gene89382.t1 AT4G01070 26.782 463 294 13 7 443 2 445 1.42e-25 109
MS.gene89382.t1 AT3G21790 34.156 243 136 8 220 442 217 455 1.68e-25 109
MS.gene89382.t1 AT5G26310 26.282 468 270 15 14 440 7 440 2.38e-25 108
MS.gene89382.t1 AT4G15480 23.789 454 298 10 12 437 17 450 3.85e-25 108
MS.gene89382.t1 AT2G16890 26.559 433 252 18 14 412 9 409 4.19e-25 107
MS.gene89382.t1 AT1G73880 24.733 469 286 18 5 432 3 445 2.80e-24 105
MS.gene89382.t1 AT2G18570 25.918 463 281 17 14 440 5 441 4.32e-24 105
MS.gene89382.t1 AT1G01390 24.696 494 301 12 14 467 8 470 1.32e-23 103
MS.gene89382.t1 AT1G78270 24.375 480 303 16 1 443 1 457 1.48e-23 103
MS.gene89382.t1 AT1G01390 25.202 496 296 14 14 467 25 487 1.57e-23 103
MS.gene89382.t1 AT5G05880 25.157 477 300 18 13 464 7 451 2.07e-23 102
MS.gene89382.t1 AT1G30530 33.508 191 120 4 272 461 263 447 2.83e-23 102
MS.gene89382.t1 AT1G22370 25.051 491 315 18 1 456 1 473 3.51e-23 102
MS.gene89382.t1 AT3G02100 25.159 473 290 18 1 444 1 438 1.00e-22 100
MS.gene89382.t1 AT1G07250 33.617 235 135 9 220 441 222 448 1.88e-22 100
MS.gene89382.t1 AT3G21800 32.927 246 136 9 220 442 213 452 3.88e-22 99.4
MS.gene89382.t1 AT4G15260 30.882 272 144 10 220 458 95 355 5.21e-22 97.4
MS.gene89382.t1 AT2G30140 23.491 464 307 17 14 458 13 447 6.27e-22 98.6
MS.gene89382.t1 AT2G30140 23.207 474 297 17 14 458 13 448 8.66e-22 98.2
MS.gene89382.t1 AT2G29710 23.291 468 289 15 15 444 6 441 8.78e-22 98.2
MS.gene89382.t1 AT2G30150 25.052 479 293 17 14 461 13 456 1.17e-21 97.8
MS.gene89382.t1 AT2G29730 22.889 450 321 14 11 444 2 441 1.80e-21 97.4
MS.gene89382.t1 AT3G16520 31.250 208 126 6 243 438 237 439 3.70e-21 96.3
MS.gene89382.t1 AT3G16520 31.250 208 126 6 243 438 237 439 3.99e-21 95.9
MS.gene89382.t1 AT2G22930 29.741 232 140 8 13 240 5 217 4.26e-21 93.6
MS.gene89382.t1 AT3G16520 31.250 208 126 6 243 438 237 439 4.77e-21 95.9
MS.gene89382.t1 AT5G59590 24.138 464 292 14 5 444 1 428 5.18e-21 95.9
MS.gene89382.t1 AT2G43840 24.831 443 283 19 14 437 7 418 6.77e-21 95.5
MS.gene89382.t1 AT2G43840 24.831 443 283 19 14 437 7 418 7.85e-21 95.1
MS.gene89382.t1 AT3G21760 29.630 243 148 6 220 442 218 457 8.74e-21 95.5
MS.gene89382.t1 AT5G17050 32.057 209 127 6 235 443 241 434 1.24e-20 94.7
MS.gene89382.t1 AT2G18560 31.148 244 139 6 218 440 116 351 1.29e-20 94.0
MS.gene89382.t1 AT4G15280 30.769 273 144 11 220 458 213 474 1.60e-20 94.4
MS.gene89382.t1 AT4G15280 30.769 273 144 11 220 458 245 506 1.65e-20 94.7
MS.gene89382.t1 AT5G05870 24.242 462 271 20 14 438 8 427 1.81e-20 94.4
MS.gene89382.t1 AT5G05900 23.567 471 284 18 8 435 2 439 2.24e-20 94.0
MS.gene89382.t1 AT2G29750 38.889 162 90 7 269 422 273 433 2.45e-20 94.0
MS.gene89382.t1 AT3G46670 24.681 470 296 16 14 458 9 445 2.54e-20 93.6
MS.gene89382.t1 AT5G05890 24.891 458 299 15 13 451 7 438 3.55e-20 93.2
MS.gene89382.t1 AT1G24100 24.536 485 296 18 14 463 11 460 4.86e-20 92.8
MS.gene89382.t1 AT3G21780 32.645 242 140 9 220 442 208 445 6.51e-20 92.8
MS.gene89382.t1 AT5G38040 25.926 459 294 17 22 461 18 449 9.06e-20 92.0
MS.gene89382.t1 AT3G21560 22.037 481 326 13 12 461 10 472 9.15e-20 92.4
MS.gene89382.t1 AT1G06000 24.516 465 266 14 10 435 7 425 9.25e-20 92.0
MS.gene89382.t1 AT2G43820 24.499 449 281 17 14 439 7 420 1.08e-19 91.7
MS.gene89382.t1 AT2G30150 24.632 475 292 17 18 461 1 440 1.13e-19 91.7
MS.gene89382.t1 AT2G36970 31.792 173 112 4 273 442 278 447 1.29e-19 91.7
MS.gene89382.t1 AT2G28080 22.328 421 300 13 18 422 22 431 1.81e-19 91.3
MS.gene89382.t1 AT2G23260 25.771 454 281 17 14 443 10 431 2.17e-19 90.9
MS.gene89382.t1 AT3G46650 23.077 468 298 17 14 461 10 435 2.73e-19 90.5
MS.gene89382.t1 AT1G07260 31.064 235 144 9 220 442 220 448 3.75e-19 90.5
MS.gene89382.t1 AT4G14090 24.336 452 306 15 1 439 1 429 9.76e-19 89.0
MS.gene89382.t1 AT3G46660 23.404 470 310 14 15 462 15 456 1.85e-18 88.2
MS.gene89382.t1 AT2G31750 25.000 256 173 9 218 459 202 452 3.68e-18 87.0
MS.gene89382.t1 AT2G31750 21.921 479 315 18 10 459 4 452 4.88e-18 87.0
MS.gene89382.t1 AT3G46690 23.556 450 291 15 14 442 9 426 6.69e-18 86.3
MS.gene89382.t1 AT1G05560 23.941 472 308 16 12 456 3 450 1.12e-17 85.9
MS.gene89382.t1 AT1G05560 24.153 472 307 17 12 456 53 500 1.22e-17 85.9
MS.gene89382.t1 AT2G23250 23.944 426 292 13 24 440 8 410 1.67e-17 85.1
MS.gene89382.t1 AT3G21750 29.388 245 143 8 220 440 205 443 2.51e-17 84.7
MS.gene89382.t1 AT5G17030 30.409 171 113 3 273 443 269 433 2.89e-17 84.3
MS.gene89382.t1 AT3G11340 24.236 458 286 16 11 435 7 436 9.02e-17 82.8
MS.gene89382.t1 AT1G07240 37.324 142 83 3 267 403 268 408 1.09e-16 82.8
MS.gene89382.t1 AT2G29740 32.812 192 116 5 220 403 225 411 1.25e-16 82.4
MS.gene89382.t1 AT5G05860 25.336 446 292 18 7 438 2 420 1.83e-16 82.0
MS.gene89382.t1 AT5G17040 29.651 172 115 3 272 443 150 315 4.20e-16 79.7
MS.gene89382.t1 AT5G59580 27.381 252 165 7 216 458 202 444 4.49e-16 80.9
MS.gene89382.t1 AT5G17040 29.651 172 115 3 272 443 252 417 4.64e-16 80.5
MS.gene89382.t1 AT1G05530 22.642 477 313 17 14 461 5 454 1.42e-15 79.3
MS.gene89382.t1 AT3G46680 23.165 436 300 12 14 437 9 421 1.51e-15 79.0
MS.gene89382.t1 AT5G38010 29.098 244 136 10 213 437 200 425 3.10e-15 78.2
MS.gene89382.t1 AT2G26480 31.068 206 122 7 241 437 223 417 3.37e-15 78.2
MS.gene89382.t1 AT3G46700 22.274 431 299 14 14 434 9 413 1.62e-14 75.9
MS.gene89382.t1 AT3G46720 21.924 447 297 14 7 437 2 412 2.29e-14 75.5
MS.gene89382.t1 AT3G55710 29.586 169 113 4 233 396 222 389 3.55e-12 68.6
MS.gene89382.t1 AT1G22370 24.503 302 197 11 176 456 12 303 8.88e-12 66.6
MS.gene89382.t1 AT5G37950 29.167 192 107 8 213 387 166 345 3.71e-11 65.1
MS.gene89382.t1 AT5G37950 29.167 192 107 8 213 387 172 351 3.91e-11 64.7

Find 125 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCATTGAGATGCTTAATTT+TGG 0.120179 3.3:-33258760 MS.gene89382:CDS
GCTCTTGGAATCGAGCTTTC+TGG 0.144798 3.3:-33258958 MS.gene89382:CDS
GATGAATGGTTCAAGGGATT+TGG 0.237877 3.3:+33259686 None:intergenic
ATGTCTTCCGCCGTTAAATT+TGG 0.249812 3.3:+33259372 None:intergenic
ATGGTGCTCTCTGCACCTTC+TGG 0.252360 3.3:+33259624 None:intergenic
ATGAATGGTTCAAGGGATTT+GGG 0.258834 3.3:+33259687 None:intergenic
CTTCAACATCTCTTATTTGC+AGG 0.281458 3.3:+33259106 None:intergenic
CCAAACAGTACCACGGTCTT+TGG 0.284498 3.3:+33258861 None:intergenic
TTTCTGGGTTACCTTTCTTT+TGG 0.292501 3.3:-33258942 MS.gene89382:CDS
ACATTTGTGGTCCACCAAAT+TGG 0.306616 3.3:-33259353 MS.gene89382:CDS
ACACTGGATGTTGAGGCTTT+TGG 0.318069 3.3:+33259461 None:intergenic
TGCTCCAAGCTGGGGTTATC+TGG 0.319120 3.3:+33259430 None:intergenic
CCATCATCTGTTCTGTTCAT+AGG 0.319211 3.3:-33259027 MS.gene89382:CDS
TGGTGCTCTCTGCACCTTCT+GGG 0.342067 3.3:+33259625 None:intergenic
ATCTGTTCTGTTCATAGGAT+TGG 0.343144 3.3:-33259022 MS.gene89382:CDS
CCTTGAACCATTCATCGAAT+TGG 0.351076 3.3:-33259679 MS.gene89382:CDS
CTCTTGGAATCGAGCTTTCT+GGG 0.354413 3.3:-33258957 MS.gene89382:CDS
CTAATTCAGTTAGATCTTGT+TGG 0.356923 3.3:+33258980 None:intergenic
GGCCAAGATTCTTGCTCAAA+AGG 0.373740 3.3:-33259766 MS.gene89382:CDS
CTTTGATCCACCTAAGGATA+AGG 0.375321 3.3:-33259400 MS.gene89382:CDS
GCACGTTCTTGTTAACCTTC+CGG 0.377522 3.3:-33258737 MS.gene89382:CDS
AGTTGATTATAATCAAAATC+AGG 0.388002 3.3:+33259246 None:intergenic
AAAATTCATCAAAGCCTGAT+TGG 0.388575 3.3:-33259524 MS.gene89382:CDS
GGCACCTCAACGGAAGATAT+TGG 0.399583 3.3:-33258830 MS.gene89382:CDS
ATATTGGCTGATGCGGCAAT+TGG 0.400336 3.3:-33258814 MS.gene89382:CDS
ATGAAGAAAACAACCCTGAT+TGG 0.404305 3.3:-33259083 MS.gene89382:CDS
CCAAAGACCGTGGTACTGTT+TGG 0.405274 3.3:-33258861 MS.gene89382:CDS
AACCCTCATGAGCCATCTTA+AGG 0.411542 3.3:+33259574 None:intergenic
GGTACATTTGAATTACCATA+TGG 0.418070 3.3:-33258898 MS.gene89382:CDS
TAGATCTTGTTGGCTAAGCC+TGG 0.419179 3.3:+33258990 None:intergenic
TCTGTTCTGTTCATAGGATT+GGG 0.424084 3.3:-33259021 MS.gene89382:CDS
TATTGGCTGATGCGGCAATT+GGG 0.434541 3.3:-33258813 MS.gene89382:CDS
TGAATTACCATATGGATTTG+AGG 0.438114 3.3:-33258890 MS.gene89382:CDS
GATTCCATTGTTAATGAAGA+TGG 0.438258 3.3:-33259858 MS.gene89382:CDS
GATCTAACTGAATTAGCTCT+TGG 0.438358 3.3:-33258973 MS.gene89382:CDS
TTTGGCTTGACCTTATCCTT+AGG 0.439765 3.3:+33259390 None:intergenic
AAATTCATCAAAGCCTGATT+GGG 0.445484 3.3:-33259523 MS.gene89382:CDS
AGCCTTACCAATTCGATGAA+TGG 0.447305 3.3:+33259672 None:intergenic
AGACATTGATCTAGCAAATC+CGG 0.453531 3.3:+33258718 None:intergenic
GCTACCTTTACCACGTATAG+AGG 0.454731 3.3:-33259652 MS.gene89382:CDS
GTTCTATCCTCAAATCCATA+TGG 0.454878 3.3:+33258883 None:intergenic
TCTATGATATTACAAGTGGT+TGG 0.456445 3.3:-33259497 MS.gene89382:CDS
CCAATTCGATGAATGGTTCA+AGG 0.456735 3.3:+33259679 None:intergenic
GATGCTCCCATGGCTAGCTA+TGG 0.465009 3.3:-33259814 MS.gene89382:CDS
AAGAAACATATGCTCCAAGC+TGG 0.465786 3.3:+33259420 None:intergenic
AAAGAGATGAGCAAGGTTAT+CGG 0.468485 3.3:-33258550 MS.gene89382:CDS
CTATGATATTACAAGTGGTT+GGG 0.469598 3.3:-33259496 MS.gene89382:CDS
AGCAACCCCACTGGAACCAC+AGG 0.473461 3.3:+33259138 None:intergenic
ATGAGCCATCTTAAGGTAAC+GGG 0.476122 3.3:+33259581 None:intergenic
GTGAAAATCAAGACATGGTT+GGG 0.476623 3.3:-33259060 MS.gene89382:CDS
ACATCTCTTATTTGCAGGGA+TGG 0.477539 3.3:+33259111 None:intergenic
TGAAGAAAACAACCCTGATT+GGG 0.479948 3.3:-33259082 MS.gene89382:CDS
TAGGATTGGGCAGCGAGTCC+AGG 0.485408 3.3:-33259008 MS.gene89382:CDS
GGCTTGACCTTATCCTTAGG+TGG 0.485820 3.3:+33259393 None:intergenic
AATGCTCTAATAATCTCATA+AGG 0.486118 3.3:+33259300 None:intergenic
GGAAGATGGGTCACTTACTA+AGG 0.486216 3.3:-33258641 MS.gene89382:CDS
ATTGGCTGATGCGGCAATTG+GGG 0.492288 3.3:-33258812 MS.gene89382:CDS
GCCAAGATTCTTGCTCAAAA+GGG 0.493461 3.3:-33259765 MS.gene89382:CDS
TAAGGTCAAGCCAAATTTAA+CGG 0.494570 3.3:-33259382 MS.gene89382:CDS
AGAAAAGAATGTAGCTATTG+AGG 0.495755 3.3:-33258677 MS.gene89382:CDS
CTTAAGGTAACGGGTGGTGT+TGG 0.496908 3.3:+33259590 None:intergenic
CATGAAATATGGTTAATTGT+CGG 0.499835 3.3:+33258459 None:intergenic
ATATCATAGAAAACCCAATC+AGG 0.499941 3.3:+33259510 None:intergenic
AACCATTCATCGAATTGGTA+AGG 0.501252 3.3:-33259674 MS.gene89382:CDS
TTCAACATCTCTTATTTGCA+GGG 0.503989 3.3:+33259107 None:intergenic
TTCATGTTGTGATGCTCCCA+TGG 0.508098 3.3:-33259824 MS.gene89382:CDS
ATGTTTCTTTGATCCACCTA+AGG 0.509284 3.3:-33259406 MS.gene89382:CDS
TTAACGGCGGAAGACATTTG+TGG 0.515924 3.3:-33259366 MS.gene89382:CDS
GACCCATCTTCCTCACTCCT+TGG 0.516746 3.3:+33258652 None:intergenic
CTCAGCTCTTAAAGACGAGT+CGG 0.520788 3.3:-33259277 MS.gene89382:CDS
TTTACCAGATAACCCCAGCT+TGG 0.520805 3.3:-33259434 MS.gene89382:CDS
CAATTCGATGAATGGTTCAA+GGG 0.533114 3.3:+33259680 None:intergenic
GTGGTACTGTTTGGAAAACA+TGG 0.534627 3.3:-33258852 MS.gene89382:CDS
TTGAAAGGAAGCCAATTTGG+TGG 0.536102 3.3:+33259342 None:intergenic
GGTGAAAATCAAGACATGGT+TGG 0.539378 3.3:-33259061 MS.gene89382:CDS
CTAGAGAACTTGAGGCAGAA+TGG 0.541461 3.3:-33259188 MS.gene89382:CDS
TTTGCCATCTTCATTAACAA+TGG 0.541620 3.3:+33259854 None:intergenic
TACCAAGGAGTGAGGAAGAT+GGG 0.543111 3.3:-33258654 MS.gene89382:CDS
CCTATGAACAGAACAGATGA+TGG 0.550040 3.3:+33259027 None:intergenic
CATGAGCCATCTTAAGGTAA+CGG 0.551425 3.3:+33259580 None:intergenic
CACCACCCGTTACCTTAAGA+TGG 0.552084 3.3:-33259586 MS.gene89382:CDS
AACGTGCCTGTGGTTCCAGT+GGG 0.554315 3.3:-33259144 MS.gene89382:CDS
TGAATGGTTCAAGGGATTTG+GGG 0.556612 3.3:+33259688 None:intergenic
AGTCCCTCTATACGTGGTAA+AGG 0.557859 3.3:+33259648 None:intergenic
GTACCAAGGAGTGAGGAAGA+TGG 0.559085 3.3:-33258655 MS.gene89382:CDS
TTACCTTAAGATGGCTCATG+AGG 0.560649 3.3:-33259577 MS.gene89382:CDS
TCTCTTATTTGCAGGGATGG+TGG 0.563649 3.3:+33259114 None:intergenic
AGAAACATATGCTCCAAGCT+GGG 0.567837 3.3:+33259421 None:intergenic
TCAGCTCTTAAAGACGAGTC+GGG 0.567866 3.3:-33259276 MS.gene89382:CDS
ATGTGTCCCATAGCTAGCCA+TGG 0.577673 3.3:+33259807 None:intergenic
GAACGTGCCTGTGGTTCCAG+TGG 0.580508 3.3:-33259145 MS.gene89382:CDS
ATGCTCCCATGGCTAGCTAT+GGG 0.581414 3.3:-33259813 MS.gene89382:CDS
TGTAGCACAAACGTTGAGGT+TGG 0.582590 3.3:-33258614 MS.gene89382:CDS
GGAAAACATGGGCACCTCAA+CGG 0.588382 3.3:-33258840 MS.gene89382:CDS
TTGGCTGATGCGGCAATTGG+GGG 0.590327 3.3:-33258811 MS.gene89382:CDS
TTCTGCCTCAAGTTCTCTAG+AGG 0.591066 3.3:+33259191 None:intergenic
GATGGTGGAAGCAACCCCAC+TGG 0.591159 3.3:+33259129 None:intergenic
GAATGGTTCAAGGGATTTGG+GGG 0.594310 3.3:+33259689 None:intergenic
GGTGTTGGATGAAATGTCCA+TGG 0.595365 3.3:+33259605 None:intergenic
ACGGAAGATATTGGCTGATG+CGG 0.597377 3.3:-33258821 MS.gene89382:CDS
AAGAACCTCTAGAGAACTTG+AGG 0.597416 3.3:-33259196 MS.gene89382:CDS
CTACCTTTACCACGTATAGA+GGG 0.606446 3.3:-33259651 MS.gene89382:CDS
GGGAGCATCACAACATGAAG+AGG 0.613488 3.3:+33259828 None:intergenic
GAGGTTGGCAATAGTTCATG+AGG 0.613513 3.3:-33258599 MS.gene89382:CDS
TGTGTCCCATAGCTAGCCAT+GGG 0.617525 3.3:+33259808 None:intergenic
TACCTTAAGATGGCTCATGA+GGG 0.619190 3.3:-33259576 MS.gene89382:CDS
GAAACATATGCTCCAAGCTG+GGG 0.622470 3.3:+33259422 None:intergenic
CTCTTACATGAACGTGCCTG+TGG 0.622831 3.3:-33259154 MS.gene89382:CDS
CGTATAGAGGGACTCCCAGA+AGG 0.623773 3.3:-33259639 MS.gene89382:CDS
GTTGGCAATAGTTCATGAGG+AGG 0.649153 3.3:-33258596 MS.gene89382:CDS
ATGTAGCTATTGAGGTACCA+AGG 0.657055 3.3:-33258669 MS.gene89382:CDS
TATTGAGGTACCAAGGAGTG+AGG 0.657416 3.3:-33258662 MS.gene89382:CDS
TCAGCCAATATCTTCCGTTG+AGG 0.660112 3.3:+33258826 None:intergenic
TTGGCAATAGTTCATGAGGA+GGG 0.663002 3.3:-33258595 MS.gene89382:CDS
AGCCATCTTAAGGTAACGGG+TGG 0.664758 3.3:+33259584 None:intergenic
TGGTACTGTTTGGAAAACAT+GGG 0.672461 3.3:-33258851 MS.gene89382:CDS
ATTGATCTAGCAAATCCGGA+AGG 0.695349 3.3:+33258722 None:intergenic
CAACGCAAAAGAGATGAGCA+AGG 0.695920 3.3:-33258557 MS.gene89382:CDS
AAAGTGTAGCACAAACGTTG+AGG 0.696867 3.3:-33258618 MS.gene89382:CDS
AGAAGGTGCAGAGAGCACCA+TGG 0.698198 3.3:-33259622 MS.gene89382:CDS
GGTCAAGCCAAATTTAACGG+CGG 0.720602 3.3:-33259379 MS.gene89382:CDS
TCTGGGAGTCCCTCTATACG+TGG 0.724806 3.3:+33259642 None:intergenic
GAGGATAGAACCAAAGACCG+TGG 0.733010 3.3:-33258871 MS.gene89382:CDS
ATTGGGTGAAAATCAAGACA+TGG 0.744368 3.3:-33259065 MS.gene89382:CDS
ACGTGCCTGTGGTTCCAGTG+GGG 0.775314 3.3:-33259143 MS.gene89382:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTTAAAAAATCTAAAAGA+GGG - chr3.3:33259413-33259432 MS.gene89382:CDS 15.0%
!! AGTTGATTATAATCAAAATC+AGG + chr3.3:33259089-33259108 None:intergenic 20.0%
!!! GTCTTTAAAAAATCTAAAAG+AGG - chr3.3:33259412-33259431 MS.gene89382:CDS 20.0%
!!! TTTTTTAAAGACCAAAAGAA+AGG + chr3.3:33259404-33259423 None:intergenic 20.0%
! AATGCTCTAATAATCTCATA+AGG + chr3.3:33259035-33259054 None:intergenic 25.0%
!! GTTTTCTATGATATTACAAG+TGG - chr3.3:33258831-33258850 MS.gene89382:CDS 25.0%
!! TCATTGAGATGCTTAATTTT+GGG - chr3.3:33259573-33259592 MS.gene89382:CDS 25.0%
!!! AGATGAATAGTTGTTTTGAA+AGG + chr3.3:33259008-33259027 None:intergenic 25.0%
AAAATTCATCAAAGCCTGAT+TGG - chr3.3:33258808-33258827 MS.gene89382:CDS 30.0%
AAATTCATCAAAGCCTGATT+GGG - chr3.3:33258809-33258828 MS.gene89382:CDS 30.0%
AGAAAAGAATGTAGCTATTG+AGG - chr3.3:33259655-33259674 MS.gene89382:CDS 30.0%
ATATCATAGAAAACCCAATC+AGG + chr3.3:33258825-33258844 None:intergenic 30.0%
CTAATTCAGTTAGATCTTGT+TGG + chr3.3:33259355-33259374 None:intergenic 30.0%
CTATGATATTACAAGTGGTT+GGG - chr3.3:33258836-33258855 MS.gene89382:CDS 30.0%
GATTCCATTGTTAATGAAGA+TGG - chr3.3:33258474-33258493 MS.gene89382:CDS 30.0%
GGTACATTTGAATTACCATA+TGG - chr3.3:33259434-33259453 MS.gene89382:CDS 30.0%
TAAGGTCAAGCCAAATTTAA+CGG - chr3.3:33258950-33258969 MS.gene89382:CDS 30.0%
TCTATGATATTACAAGTGGT+TGG - chr3.3:33258835-33258854 MS.gene89382:CDS 30.0%
TGAATTACCATATGGATTTG+AGG - chr3.3:33259442-33259461 MS.gene89382:CDS 30.0%
TTTGCCATCTTCATTAACAA+TGG + chr3.3:33258481-33258500 None:intergenic 30.0%
! GTCATTGAGATGCTTAATTT+TGG - chr3.3:33259572-33259591 MS.gene89382:CDS 30.0%
! TTCAACATCTCTTATTTGCA+GGG + chr3.3:33259228-33259247 None:intergenic 30.0%
AAAGAGATGAGCAAGGTTAT+CGG - chr3.3:33259782-33259801 MS.gene89382:CDS 35.0%
AACCATTCATCGAATTGGTA+AGG - chr3.3:33258658-33258677 MS.gene89382:CDS 35.0%
AGACATTGATCTAGCAAATC+CGG + chr3.3:33259617-33259636 None:intergenic 35.0%
ATCTGTTCTGTTCATAGGAT+TGG - chr3.3:33259310-33259329 MS.gene89382:CDS 35.0%
ATGAAGAAAACAACCCTGAT+TGG - chr3.3:33259249-33259268 MS.gene89382:CDS 35.0%
ATGAATGGTTCAAGGGATTT+GGG + chr3.3:33258648-33258667 None:intergenic 35.0%
ATGTTTCTTTGATCCACCTA+AGG - chr3.3:33258926-33258945 MS.gene89382:CDS 35.0%
ATTGGGTGAAAATCAAGACA+TGG - chr3.3:33259267-33259286 MS.gene89382:CDS 35.0%
CAATTCGATGAATGGTTCAA+GGG + chr3.3:33258655-33258674 None:intergenic 35.0%
GTGAAAATCAAGACATGGTT+GGG - chr3.3:33259272-33259291 MS.gene89382:CDS 35.0%
GTTCTATCCTCAAATCCATA+TGG + chr3.3:33259452-33259471 None:intergenic 35.0%
TCTGTTCTGTTCATAGGATT+GGG - chr3.3:33259311-33259330 MS.gene89382:CDS 35.0%
TGAAGAAAACAACCCTGATT+GGG - chr3.3:33259250-33259269 MS.gene89382:CDS 35.0%
TGGTACTGTTTGGAAAACAT+GGG - chr3.3:33259481-33259500 MS.gene89382:CDS 35.0%
! ATGTTTTCCAAACAGTACCA+CGG + chr3.3:33259481-33259500 None:intergenic 35.0%
! CTTCAACATCTCTTATTTGC+AGG + chr3.3:33259229-33259248 None:intergenic 35.0%
! GATCTAACTGAATTAGCTCT+TGG - chr3.3:33259359-33259378 MS.gene89382:CDS 35.0%
! GGCATGCGATCAATATTTTT+GGG + chr3.3:33258618-33258637 None:intergenic 35.0%
! TCTTGATTTTCACCCAATCA+GGG + chr3.3:33259265-33259284 None:intergenic 35.0%
! TTATCTGGTAAAAAGCACAC+TGG + chr3.3:33258890-33258909 None:intergenic 35.0%
! TTTCTGGGTTACCTTTCTTT+TGG - chr3.3:33259390-33259409 MS.gene89382:CDS 35.0%
!! GCATGCGATCAATATTTTTG+GGG + chr3.3:33258617-33258636 None:intergenic 35.0%
!!! CATACTTCCTTTTTTCGAGT+TGG - chr3.3:33258545-33258564 MS.gene89382:CDS 35.0%
!!! CATGCGATCAATATTTTTGG+GGG + chr3.3:33258616-33258635 None:intergenic 35.0%
!!! GTTTTGAAAGGAAGCCAATT+TGG + chr3.3:33258996-33259015 None:intergenic 35.0%
AAAGTGTAGCACAAACGTTG+AGG - chr3.3:33259714-33259733 MS.gene89382:CDS 40.0%
AAGAAACATATGCTCCAAGC+TGG + chr3.3:33258915-33258934 None:intergenic 40.0%
ACATTTGTGGTCCACCAAAT+TGG - chr3.3:33258979-33258998 MS.gene89382:CDS 40.0%
AGAAACATATGCTCCAAGCT+GGG + chr3.3:33258914-33258933 None:intergenic 40.0%
AGCCTTACCAATTCGATGAA+TGG + chr3.3:33258663-33258682 None:intergenic 40.0%
ATCTTGGCCAACTCGAAAAA+AGG + chr3.3:33258555-33258574 None:intergenic 40.0%
ATGAGCCATCTTAAGGTAAC+GGG + chr3.3:33258754-33258773 None:intergenic 40.0%
ATGTCTTCCGCCGTTAAATT+TGG + chr3.3:33258963-33258982 None:intergenic 40.0%
ATTGATCTAGCAAATCCGGA+AGG + chr3.3:33259613-33259632 None:intergenic 40.0%
CATGAGCCATCTTAAGGTAA+CGG + chr3.3:33258755-33258774 None:intergenic 40.0%
CCAATTCGATGAATGGTTCA+AGG + chr3.3:33258656-33258675 None:intergenic 40.0%
CCATCATCTGTTCTGTTCAT+AGG - chr3.3:33259305-33259324 MS.gene89382:CDS 40.0%
CCTATGAACAGAACAGATGA+TGG + chr3.3:33259308-33259327 None:intergenic 40.0%
CCTTGAACCATTCATCGAAT+TGG - chr3.3:33258653-33258672 MS.gene89382:CDS 40.0%
CTACCTTTACCACGTATAGA+GGG - chr3.3:33258681-33258700 MS.gene89382:CDS 40.0%
CTTTGATCCACCTAAGGATA+AGG - chr3.3:33258932-33258951 MS.gene89382:CDS 40.0%
GATGAATGGTTCAAGGGATT+TGG + chr3.3:33258649-33258668 None:intergenic 40.0%
GCCAAGATTCTTGCTCAAAA+GGG - chr3.3:33258567-33258586 MS.gene89382:CDS 40.0%
GGTGAAAATCAAGACATGGT+TGG - chr3.3:33259271-33259290 MS.gene89382:CDS 40.0%
GTGGTACTGTTTGGAAAACA+TGG - chr3.3:33259480-33259499 MS.gene89382:CDS 40.0%
TACCTTAAGATGGCTCATGA+GGG - chr3.3:33258756-33258775 MS.gene89382:CDS 40.0%
TGAATGGTTCAAGGGATTTG+GGG + chr3.3:33258647-33258666 None:intergenic 40.0%
TTACCTTAAGATGGCTCATG+AGG - chr3.3:33258755-33258774 MS.gene89382:CDS 40.0%
TTGAAAGGAAGCCAATTTGG+TGG + chr3.3:33258993-33259012 None:intergenic 40.0%
TTGGCAATAGTTCATGAGGA+GGG - chr3.3:33259737-33259756 MS.gene89382:CDS 40.0%
! AAAAAGCACACTGGATGTTG+AGG + chr3.3:33258881-33258900 None:intergenic 40.0%
! AAGAACCTCTAGAGAACTTG+AGG - chr3.3:33259136-33259155 MS.gene89382:CDS 40.0%
! ACATCTCTTATTTGCAGGGA+TGG + chr3.3:33259224-33259243 None:intergenic 40.0%
! ACCCTTTTGAGCAAGAATCT+TGG + chr3.3:33258571-33258590 None:intergenic 40.0%
! ATGTAGCTATTGAGGTACCA+AGG - chr3.3:33259663-33259682 MS.gene89382:CDS 40.0%
! GGGCATGCGATCAATATTTT+TGG + chr3.3:33258619-33258638 None:intergenic 40.0%
! GTCTTGATTTTCACCCAATC+AGG + chr3.3:33259266-33259285 None:intergenic 40.0%
!! ATGTTGAGGCTTTTGGCTAT+TGG + chr3.3:33258867-33258886 None:intergenic 40.0%
!! TTTGGCTTGACCTTATCCTT+AGG + chr3.3:33258945-33258964 None:intergenic 40.0%
!!! ATTTTTGGGGGTGTTTACGA+AGG + chr3.3:33258604-33258623 None:intergenic 40.0%
AACCCTCATGAGCCATCTTA+AGG + chr3.3:33258761-33258780 None:intergenic 45.0%
AGTCCCTCTATACGTGGTAA+AGG + chr3.3:33258687-33258706 None:intergenic 45.0%
CAACGCAAAAGAGATGAGCA+AGG - chr3.3:33259775-33259794 MS.gene89382:CDS 45.0%
CTAGAGAACTTGAGGCAGAA+TGG - chr3.3:33259144-33259163 MS.gene89382:CDS 45.0%
CTCAGCTCTTAAAGACGAGT+CGG - chr3.3:33259055-33259074 MS.gene89382:CDS 45.0%
CTCTTGGAATCGAGCTTTCT+GGG - chr3.3:33259375-33259394 MS.gene89382:CDS 45.0%
GAAACATATGCTCCAAGCTG+GGG + chr3.3:33258913-33258932 None:intergenic 45.0%
GAATGGTTCAAGGGATTTGG+GGG + chr3.3:33258646-33258665 None:intergenic 45.0%
GAGGTTGGCAATAGTTCATG+AGG - chr3.3:33259733-33259752 MS.gene89382:CDS 45.0%
GCACGTTCTTGTTAACCTTC+CGG - chr3.3:33259595-33259614 MS.gene89382:CDS 45.0%
GCTACCTTTACCACGTATAG+AGG - chr3.3:33258680-33258699 MS.gene89382:CDS 45.0%
GGAAGATGGGTCACTTACTA+AGG - chr3.3:33259691-33259710 MS.gene89382:CDS 45.0%
GGCCAAGATTCTTGCTCAAA+AGG - chr3.3:33258566-33258585 MS.gene89382:CDS 45.0%
GGTCAAGCCAAATTTAACGG+CGG - chr3.3:33258953-33258972 MS.gene89382:CDS 45.0%
GTTGGCAATAGTTCATGAGG+AGG - chr3.3:33259736-33259755 MS.gene89382:CDS 45.0%
TACCAAGGAGTGAGGAAGAT+GGG - chr3.3:33259678-33259697 MS.gene89382:CDS 45.0%
TCAGCCAATATCTTCCGTTG+AGG + chr3.3:33259509-33259528 None:intergenic 45.0%
TCAGCTCTTAAAGACGAGTC+GGG - chr3.3:33259056-33259075 MS.gene89382:CDS 45.0%
TGTAGCACAAACGTTGAGGT+TGG - chr3.3:33259718-33259737 MS.gene89382:CDS 45.0%
TTAACGGCGGAAGACATTTG+TGG - chr3.3:33258966-33258985 MS.gene89382:CDS 45.0%
TTCATGTTGTGATGCTCCCA+TGG - chr3.3:33258508-33258527 MS.gene89382:CDS 45.0%
TTCTGCCTCAAGTTCTCTAG+AGG + chr3.3:33259144-33259163 None:intergenic 45.0%
TTTACCAGATAACCCCAGCT+TGG - chr3.3:33258898-33258917 MS.gene89382:CDS 45.0%
! ACACTGGATGTTGAGGCTTT+TGG + chr3.3:33258874-33258893 None:intergenic 45.0%
! ACGGAAGATATTGGCTGATG+CGG - chr3.3:33259511-33259530 MS.gene89382:CDS 45.0%
! ATATTGGCTGATGCGGCAAT+TGG - chr3.3:33259518-33259537 MS.gene89382:CDS 45.0%
! GGTGTTGGATGAAATGTCCA+TGG + chr3.3:33258730-33258749 None:intergenic 45.0%
! TAGATCTTGTTGGCTAAGCC+TGG + chr3.3:33259345-33259364 None:intergenic 45.0%
! TATTGAGGTACCAAGGAGTG+AGG - chr3.3:33259670-33259689 MS.gene89382:CDS 45.0%
! TATTGGCTGATGCGGCAATT+GGG - chr3.3:33259519-33259538 MS.gene89382:CDS 45.0%
! TCAAGGGATTTGGGGGTTTT+GGG + chr3.3:33258639-33258658 None:intergenic 45.0%
! TCTCTTATTTGCAGGGATGG+TGG + chr3.3:33259221-33259240 None:intergenic 45.0%
! TTCAAGGGATTTGGGGGTTT+TGG + chr3.3:33258640-33258659 None:intergenic 45.0%
ATGTGTCCCATAGCTAGCCA+TGG + chr3.3:33258528-33258547 None:intergenic 50.0%
ATTGGCTGATGCGGCAATTG+GGG - chr3.3:33259520-33259539 MS.gene89382:CDS 50.0%
CACCACCCGTTACCTTAAGA+TGG - chr3.3:33258746-33258765 MS.gene89382:CDS 50.0%
CCAAACAGTACCACGGTCTT+TGG + chr3.3:33259474-33259493 None:intergenic 50.0%
CCAAAGACCGTGGTACTGTT+TGG - chr3.3:33259471-33259490 MS.gene89382:CDS 50.0%
CTCTTACATGAACGTGCCTG+TGG - chr3.3:33259178-33259197 MS.gene89382:CDS 50.0%
GAGGATAGAACCAAAGACCG+TGG - chr3.3:33259461-33259480 MS.gene89382:CDS 50.0%
GCTCTTGGAATCGAGCTTTC+TGG - chr3.3:33259374-33259393 MS.gene89382:CDS 50.0%
GGAAAACATGGGCACCTCAA+CGG - chr3.3:33259492-33259511 MS.gene89382:CDS 50.0%
GGCACCTCAACGGAAGATAT+TGG - chr3.3:33259502-33259521 MS.gene89382:CDS 50.0%
GGCTTGACCTTATCCTTAGG+TGG + chr3.3:33258942-33258961 None:intergenic 50.0%
GGGGGTTGCATTTGTCATTG+TGG - chr3.3:33259539-33259558 MS.gene89382:CDS 50.0%
GTACCAAGGAGTGAGGAAGA+TGG - chr3.3:33259677-33259696 MS.gene89382:CDS 50.0%
TGTGTCCCATAGCTAGCCAT+GGG + chr3.3:33258527-33258546 None:intergenic 50.0%
! ATGCTCCCATGGCTAGCTAT+GGG - chr3.3:33258519-33258538 MS.gene89382:CDS 50.0%
!! AGCCATCTTAAGGTAACGGG+TGG + chr3.3:33258751-33258770 None:intergenic 50.0%
!! CTTAAGGTAACGGGTGGTGT+TGG + chr3.3:33258745-33258764 None:intergenic 50.0%
!! GGGAGCATCACAACATGAAG+AGG + chr3.3:33258507-33258526 None:intergenic 50.0%
AACGTGCCTGTGGTTCCAGT+GGG - chr3.3:33259188-33259207 MS.gene89382:CDS 55.0%
ATGGTGCTCTCTGCACCTTC+TGG + chr3.3:33258711-33258730 None:intergenic 55.0%
CGTATAGAGGGACTCCCAGA+AGG - chr3.3:33258693-33258712 MS.gene89382:CDS 55.0%
GACCCATCTTCCTCACTCCT+TGG + chr3.3:33259683-33259702 None:intergenic 55.0%
TCTGGGAGTCCCTCTATACG+TGG + chr3.3:33258693-33258712 None:intergenic 55.0%
TGCTCCAAGCTGGGGTTATC+TGG + chr3.3:33258905-33258924 None:intergenic 55.0%
TGGTGCTCTCTGCACCTTCT+GGG + chr3.3:33258710-33258729 None:intergenic 55.0%
TTGGCTGATGCGGCAATTGG+GGG - chr3.3:33259521-33259540 MS.gene89382:CDS 55.0%
! GATGCTCCCATGGCTAGCTA+TGG - chr3.3:33258518-33258537 MS.gene89382:CDS 55.0%
!! AGAAGGTGCAGAGAGCACCA+TGG - chr3.3:33258710-33258729 MS.gene89382:CDS 55.0%
ACGTGCCTGTGGTTCCAGTG+GGG - chr3.3:33259189-33259208 MS.gene89382:CDS 60.0%
AGCAACCCCACTGGAACCAC+AGG + chr3.3:33259197-33259216 None:intergenic 60.0%
GAACGTGCCTGTGGTTCCAG+TGG - chr3.3:33259187-33259206 MS.gene89382:CDS 60.0%
TAGGATTGGGCAGCGAGTCC+AGG - chr3.3:33259324-33259343 MS.gene89382:CDS 60.0%
!! GATGGTGGAAGCAACCCCAC+TGG + chr3.3:33259206-33259225 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 33258471 33259883 33258471 ID=MS.gene89382
chr3.3 mRNA 33258471 33259883 33258471 ID=MS.gene89382.t1;Parent=MS.gene89382
chr3.3 exon 33258471 33259883 33258471 ID=MS.gene89382.t1.exon1;Parent=MS.gene89382.t1
chr3.3 CDS 33258471 33259883 33258471 ID=cds.MS.gene89382.t1;Parent=MS.gene89382.t1
Gene Sequence

>MS.gene89382

ATGGATTCCATTGTTAATGAAGATGGCAAAAAACCTCTTCATGTTGTGATGCTCCCATGGCTAGCTATGGGACACATACTTCCTTTTTTCGAGTTGGCCAAGATTCTTGCTCAAAAGGGTCACTTTGTAACCTTCGTAAACACCCCCAAAAATATTGATCGCATGCCCAAAACCCCCAAATCCCTTGAACCATTCATCGAATTGGTAAGGCTACCTTTACCACGTATAGAGGGACTCCCAGAAGGTGCAGAGAGCACCATGGACATTTCATCCAACACCACCCGTTACCTTAAGATGGCTCATGAGGGTTTTCAAGACGACGTAACTAAGATACTCAAAAATTCATCAAAGCCTGATTGGGTTTTCTATGATATTACAAGTGGTTGGGTAGCACCAATAGCCAAAAGCCTCAACATCCAGTGTGCTTTTTACCAGATAACCCCAGCTTGGAGCATATGTTTCTTTGATCCACCTAAGGATAAGGTCAAGCCAAATTTAACGGCGGAAGACATTTGTGGTCCACCAAATTGGCTTCCTTTCAAAACAACTATTCATCTCAAGCCTTATGAGATTATTAGAGCATTCTCAGCTCTTAAAGACGAGTCGGGAAAAATGCCTGATTTTGATTATAATCAACTAAATTCAAGTTGTGACATACTTCTTCTAAGAACCTCTAGAGAACTTGAGGCAGAATGGTTAGATTATGTCTCTTACATGAACGTGCCTGTGGTTCCAGTGGGGTTGCTTCCACCATCCCTGCAAATAAGAGATGTTGAAGATGAAGAAAACAACCCTGATTGGGTGAAAATCAAGACATGGTTGGGAACAAGAGAACCATCATCTGTTCTGTTCATAGGATTGGGCAGCGAGTCCAGGCTTAGCCAACAAGATCTAACTGAATTAGCTCTTGGAATCGAGCTTTCTGGGTTACCTTTCTTTTGGTCTTTAAAAAATCTAAAAGAGGGTACATTTGAATTACCATATGGATTTGAGGATAGAACCAAAGACCGTGGTACTGTTTGGAAAACATGGGCACCTCAACGGAAGATATTGGCTGATGCGGCAATTGGGGGTTGCATTTGTCATTGTGGTGCAAGTTCTGTCATTGAGATGCTTAATTTTGGGCACGTTCTTGTTAACCTTCCGGATTTGCTAGATCAATGTCTGTTTTCAAGAGCACTAGTAGAAAAGAATGTAGCTATTGAGGTACCAAGGAGTGAGGAAGATGGGTCACTTACTAAGGAAAGTGTAGCACAAACGTTGAGGTTGGCAATAGTTCATGAGGAGGGAAGTGCTTATAGAAACAACGCAAAAGAGATGAGCAAGGTTATCGGTTCAAAAGATCTTCACAATCAGTACATTGAAGATTTCATTGCGATTCTTCATAAGTATAGAGTTCATTCCGACAATTAA

Protein sequence

>MS.gene89382.t1

MDSIVNEDGKKPLHVVMLPWLAMGHILPFFELAKILAQKGHFVTFVNTPKNIDRMPKTPKSLEPFIELVRLPLPRIEGLPEGAESTMDISSNTTRYLKMAHEGFQDDVTKILKNSSKPDWVFYDITSGWVAPIAKSLNIQCAFYQITPAWSICFFDPPKDKVKPNLTAEDICGPPNWLPFKTTIHLKPYEIIRAFSALKDESGKMPDFDYNQLNSSCDILLLRTSRELEAEWLDYVSYMNVPVVPVGLLPPSLQIRDVEDEENNPDWVKIKTWLGTREPSSVLFIGLGSESRLSQQDLTELALGIELSGLPFFWSLKNLKEGTFELPYGFEDRTKDRGTVWKTWAPQRKILADAAIGGCICHCGASSVIEMLNFGHVLVNLPDLLDQCLFSRALVEKNVAIEVPRSEEDGSLTKESVAQTLRLAIVHEEGSAYRNNAKEMSKVIGSKDLHNQYIEDFIAILHKYRVHSDN