Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91575.t1 | XP_013448954.1 | 94 | 266 | 16 | 0 | 1 | 266 | 1 | 266 | 2.80E-139 | 504.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91575.t1 | P50162 | 57.5 | 268 | 111 | 1 | 1 | 265 | 1 | 268 | 9.3e-83 | 308.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91575.t1 | A0A072U0P7 | 94.0 | 266 | 16 | 0 | 1 | 266 | 1 | 266 | 2.0e-139 | 504.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene91575 | 0.801066 | 1.07E-48 | -1.69E-46 |
| MS.gene049346 | MS.gene91575 | 0.813366 | 2.66E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene91575 | 0.825139 | 5.52E-54 | -1.69E-46 |
| MS.gene049910 | MS.gene91575 | 0.83073 | 2.49E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene91575 | 0.806413 | 8.33E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene91575 | 0.805906 | 1.06E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene91575 | 0.801259 | 9.79E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene91575 | 0.80785 | 4.13E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene91575 | 0.800115 | 1.68E-48 | -1.69E-46 |
| MS.gene052178 | MS.gene91575 | 0.837746 | 4.33E-57 | -1.69E-46 |
| MS.gene053557 | MS.gene91575 | 0.804765 | 1.85E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene91575 | 0.845433 | 4.07E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene91575 | 0.806592 | 7.63E-50 | -1.69E-46 |
| MS.gene053971 | MS.gene91575 | 0.812982 | 3.22E-51 | -1.69E-46 |
| MS.gene054214 | MS.gene91575 | 0.803061 | 4.17E-49 | -1.69E-46 |
| MS.gene055207 | MS.gene91575 | 0.807381 | 5.20E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene91575 | 0.813536 | 2.44E-51 | -1.69E-46 |
| MS.gene055428 | MS.gene91575 | 0.810136 | 1.34E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene91575 | 0.801871 | 7.34E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene91575 | 0.814521 | 1.48E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene91575 | 0.805159 | 1.53E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene91575 | 0.817934 | 2.55E-52 | -1.69E-46 |
| MS.gene057754 | MS.gene91575 | 0.81253 | 4.05E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene91575 | 0.814372 | 1.59E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene91575 | 0.802666 | 5.04E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene91575 | 0.803254 | 3.80E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene91575 | 0.81111 | 8.25E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene91575 | 0.811827 | 5.76E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene91575 | 0.850629 | 1.50E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91575.t1 | MTR_7g063360 | 93.985 | 266 | 16 | 0 | 1 | 266 | 1 | 266 | 0.0 | 518 |
| MS.gene91575.t1 | MTR_7g063390 | 87.970 | 266 | 32 | 0 | 1 | 266 | 1 | 266 | 2.26e-178 | 491 |
| MS.gene91575.t1 | MTR_7g063260 | 78.868 | 265 | 56 | 0 | 1 | 265 | 1 | 265 | 4.33e-153 | 427 |
| MS.gene91575.t1 | MTR_7g063330 | 77.358 | 265 | 58 | 2 | 1 | 265 | 1 | 263 | 8.03e-151 | 422 |
| MS.gene91575.t1 | MTR_7g063270 | 77.358 | 265 | 59 | 1 | 1 | 265 | 1 | 264 | 9.39e-151 | 421 |
| MS.gene91575.t1 | MTR_7g063320 | 75.188 | 266 | 65 | 1 | 1 | 266 | 1 | 265 | 7.28e-143 | 401 |
| MS.gene91575.t1 | MTR_3g068070 | 59.091 | 264 | 104 | 1 | 3 | 266 | 2 | 261 | 5.54e-107 | 311 |
| MS.gene91575.t1 | MTR_7g063270 | 61.132 | 265 | 53 | 3 | 1 | 265 | 1 | 215 | 1.42e-105 | 305 |
| MS.gene91575.t1 | MTR_3g068155 | 57.308 | 260 | 107 | 1 | 7 | 266 | 10 | 265 | 6.55e-104 | 303 |
| MS.gene91575.t1 | MTR_4g064883 | 58.203 | 256 | 103 | 2 | 11 | 266 | 9 | 260 | 2.55e-103 | 301 |
| MS.gene91575.t1 | MTR_3g068175 | 57.358 | 265 | 109 | 1 | 2 | 266 | 3 | 263 | 6.20e-103 | 301 |
| MS.gene91575.t1 | MTR_3g068085 | 58.964 | 251 | 99 | 1 | 16 | 266 | 15 | 261 | 1.13e-100 | 295 |
| MS.gene91575.t1 | MTR_3g068175 | 56.506 | 269 | 109 | 2 | 2 | 266 | 3 | 267 | 1.20e-100 | 295 |
| MS.gene91575.t1 | MTR_4g064887 | 54.887 | 266 | 115 | 2 | 1 | 266 | 1 | 261 | 3.41e-99 | 291 |
| MS.gene91575.t1 | MTR_3g068065 | 58.000 | 250 | 101 | 1 | 16 | 265 | 17 | 262 | 4.77e-96 | 283 |
| MS.gene91575.t1 | MTR_4g064883 | 60.406 | 197 | 78 | 0 | 11 | 207 | 9 | 205 | 9.85e-83 | 247 |
| MS.gene91575.t1 | MTR_4g064887 | 55.610 | 205 | 90 | 1 | 1 | 205 | 1 | 204 | 2.45e-77 | 234 |
| MS.gene91575.t1 | MTR_4g132850 | 33.600 | 250 | 157 | 5 | 16 | 264 | 7 | 248 | 9.24e-28 | 107 |
| MS.gene91575.t1 | MTR_7g094520 | 31.939 | 263 | 159 | 6 | 12 | 264 | 7 | 259 | 2.43e-24 | 98.6 |
| MS.gene91575.t1 | MTR_7g094510 | 33.077 | 260 | 152 | 8 | 16 | 264 | 6 | 254 | 2.80e-24 | 98.2 |
| MS.gene91575.t1 | MTR_3g085740 | 28.685 | 251 | 162 | 6 | 22 | 266 | 81 | 320 | 2.93e-23 | 97.1 |
| MS.gene91575.t1 | MTR_7g080410 | 31.183 | 186 | 122 | 4 | 23 | 203 | 45 | 229 | 4.37e-21 | 90.5 |
| MS.gene91575.t1 | MTR_7g080410 | 31.183 | 186 | 122 | 4 | 23 | 203 | 45 | 229 | 6.94e-21 | 90.5 |
| MS.gene91575.t1 | MTR_8g442750 | 26.848 | 257 | 175 | 4 | 16 | 264 | 14 | 265 | 9.93e-19 | 84.0 |
| MS.gene91575.t1 | MTR_4g052350 | 30.116 | 259 | 160 | 9 | 16 | 266 | 14 | 259 | 1.14e-18 | 83.6 |
| MS.gene91575.t1 | MTR_4g058810 | 29.070 | 258 | 172 | 8 | 16 | 266 | 11 | 264 | 1.29e-18 | 83.2 |
| MS.gene91575.t1 | MTR_6g023990 | 28.986 | 276 | 170 | 8 | 1 | 264 | 1 | 262 | 1.60e-18 | 82.8 |
| MS.gene91575.t1 | MTR_4g131740 | 28.462 | 260 | 170 | 7 | 16 | 266 | 40 | 292 | 4.29e-18 | 82.4 |
| MS.gene91575.t1 | MTR_1196s0010 | 32.129 | 249 | 150 | 8 | 21 | 264 | 279 | 513 | 5.30e-18 | 83.6 |
| MS.gene91575.t1 | MTR_1g068955 | 30.769 | 260 | 155 | 8 | 16 | 262 | 14 | 261 | 1.05e-17 | 80.9 |
| MS.gene91575.t1 | MTR_6g023590 | 28.846 | 260 | 163 | 7 | 16 | 264 | 13 | 261 | 1.06e-17 | 80.9 |
| MS.gene91575.t1 | MTR_4g058840 | 29.070 | 258 | 172 | 8 | 16 | 266 | 11 | 264 | 1.46e-17 | 80.5 |
| MS.gene91575.t1 | MTR_4g058820 | 29.070 | 258 | 172 | 8 | 16 | 266 | 11 | 264 | 1.46e-17 | 80.5 |
| MS.gene91575.t1 | MTR_7g105460 | 28.626 | 262 | 163 | 8 | 16 | 266 | 13 | 261 | 1.42e-15 | 75.1 |
| MS.gene91575.t1 | MTR_4g052320 | 28.627 | 255 | 170 | 7 | 16 | 266 | 8 | 254 | 2.96e-15 | 73.9 |
| MS.gene91575.t1 | MTR_6g023600 | 28.571 | 259 | 165 | 7 | 16 | 264 | 13 | 261 | 5.73e-15 | 73.2 |
| MS.gene91575.t1 | MTR_4g052340 | 28.016 | 257 | 168 | 7 | 16 | 266 | 14 | 259 | 6.34e-15 | 73.2 |
| MS.gene91575.t1 | MTR_1g082760 | 26.154 | 260 | 175 | 7 | 16 | 266 | 40 | 291 | 1.37e-14 | 72.4 |
| MS.gene91575.t1 | MTR_8g044240 | 28.780 | 205 | 134 | 6 | 16 | 210 | 69 | 271 | 2.16e-14 | 72.4 |
| MS.gene91575.t1 | MTR_7g071680 | 27.839 | 273 | 167 | 8 | 16 | 265 | 29 | 294 | 2.52e-14 | 71.6 |
| MS.gene91575.t1 | MTR_7g083870 | 28.736 | 261 | 167 | 8 | 16 | 265 | 35 | 287 | 2.53e-14 | 71.6 |
| MS.gene91575.t1 | MTR_7g113650 | 27.586 | 261 | 170 | 8 | 16 | 266 | 40 | 291 | 2.85e-14 | 71.6 |
| MS.gene91575.t1 | MTR_7g105590 | 29.630 | 189 | 126 | 5 | 16 | 201 | 8 | 192 | 4.41e-14 | 69.3 |
| MS.gene91575.t1 | MTR_4g052300 | 28.235 | 255 | 170 | 7 | 16 | 266 | 8 | 253 | 4.81e-14 | 70.5 |
| MS.gene91575.t1 | MTR_6g023950 | 27.612 | 268 | 156 | 7 | 16 | 264 | 13 | 261 | 7.55e-14 | 70.1 |
| MS.gene91575.t1 | MTR_4g078630 | 27.099 | 262 | 170 | 7 | 16 | 265 | 19 | 271 | 2.63e-13 | 68.6 |
| MS.gene91575.t1 | MTR_6g023600 | 28.185 | 259 | 160 | 7 | 16 | 264 | 13 | 255 | 9.83e-13 | 66.6 |
| MS.gene91575.t1 | MTR_7g105580 | 28.516 | 256 | 151 | 11 | 16 | 265 | 8 | 237 | 1.24e-12 | 66.2 |
| MS.gene91575.t1 | MTR_1579s0020 | 34.524 | 84 | 50 | 1 | 182 | 265 | 1 | 79 | 1.27e-12 | 62.8 |
| MS.gene91575.t1 | MTR_7g107670 | 28.846 | 260 | 167 | 7 | 16 | 265 | 33 | 284 | 2.63e-12 | 65.9 |
| MS.gene91575.t1 | MTR_4g058830 | 30.573 | 157 | 103 | 5 | 113 | 266 | 57 | 210 | 1.45e-11 | 62.8 |
| MS.gene91575.t1 | MTR_6g088500 | 26.341 | 205 | 130 | 6 | 22 | 206 | 184 | 387 | 4.20e-11 | 62.8 |
| MS.gene91575.t1 | MTR_3g098470 | 33.108 | 148 | 96 | 3 | 12 | 158 | 28 | 173 | 4.73e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91575.t1 | AT5G06060 | 57.422 | 256 | 105 | 1 | 11 | 266 | 4 | 255 | 2.65e-107 | 311 |
| MS.gene91575.t1 | AT1G07440 | 56.420 | 257 | 107 | 1 | 10 | 266 | 6 | 257 | 3.21e-103 | 301 |
| MS.gene91575.t1 | AT2G29340 | 55.426 | 258 | 107 | 2 | 11 | 266 | 2 | 253 | 3.44e-100 | 293 |
| MS.gene91575.t1 | AT2G29340 | 55.426 | 258 | 107 | 2 | 11 | 266 | 2 | 253 | 4.72e-100 | 295 |
| MS.gene91575.t1 | AT2G29320 | 56.923 | 260 | 102 | 4 | 11 | 266 | 7 | 260 | 1.54e-99 | 292 |
| MS.gene91575.t1 | AT2G29260 | 54.510 | 255 | 112 | 1 | 12 | 266 | 64 | 314 | 1.42e-98 | 291 |
| MS.gene91575.t1 | AT2G29290 | 54.688 | 256 | 112 | 1 | 11 | 266 | 2 | 253 | 1.91e-98 | 289 |
| MS.gene91575.t1 | AT2G29300 | 54.789 | 261 | 105 | 3 | 11 | 266 | 2 | 254 | 3.00e-98 | 288 |
| MS.gene91575.t1 | AT2G29360 | 54.851 | 268 | 113 | 2 | 1 | 266 | 1 | 262 | 5.61e-98 | 288 |
| MS.gene91575.t1 | AT2G29300 | 55.000 | 260 | 104 | 3 | 11 | 265 | 2 | 253 | 4.12e-97 | 286 |
| MS.gene91575.t1 | AT2G29330 | 56.641 | 256 | 107 | 1 | 11 | 266 | 2 | 253 | 4.34e-97 | 285 |
| MS.gene91575.t1 | AT2G30670 | 53.462 | 260 | 109 | 2 | 11 | 266 | 2 | 253 | 2.44e-96 | 283 |
| MS.gene91575.t1 | AT2G29350 | 55.642 | 257 | 109 | 1 | 10 | 266 | 9 | 260 | 1.73e-95 | 281 |
| MS.gene91575.t1 | AT2G29310 | 54.651 | 258 | 109 | 2 | 11 | 266 | 2 | 253 | 4.08e-95 | 280 |
| MS.gene91575.t1 | AT2G29150 | 54.444 | 270 | 110 | 4 | 1 | 266 | 1 | 261 | 4.14e-95 | 281 |
| MS.gene91575.t1 | AT1G07450 | 54.510 | 255 | 109 | 3 | 13 | 266 | 5 | 253 | 8.46e-95 | 280 |
| MS.gene91575.t1 | AT2G29370 | 54.340 | 265 | 106 | 3 | 8 | 266 | 7 | 262 | 2.15e-93 | 276 |
| MS.gene91575.t1 | AT2G29320 | 55.462 | 238 | 97 | 3 | 32 | 266 | 11 | 242 | 5.57e-88 | 262 |
| MS.gene91575.t1 | AT2G29290 | 52.564 | 234 | 107 | 1 | 33 | 266 | 7 | 236 | 2.10e-84 | 253 |
| MS.gene91575.t1 | AT2G29310 | 52.743 | 237 | 104 | 2 | 32 | 266 | 21 | 251 | 2.69e-81 | 245 |
| MS.gene91575.t1 | AT2G29340 | 57.071 | 198 | 85 | 0 | 11 | 208 | 2 | 199 | 8.70e-80 | 239 |
| MS.gene91575.t1 | AT2G29340 | 57.071 | 198 | 85 | 0 | 11 | 208 | 2 | 199 | 8.70e-80 | 239 |
| MS.gene91575.t1 | AT2G29350 | 53.540 | 226 | 100 | 1 | 41 | 266 | 2 | 222 | 1.52e-78 | 237 |
| MS.gene91575.t1 | AT2G29320 | 59.487 | 195 | 77 | 2 | 11 | 203 | 7 | 201 | 4.19e-78 | 235 |
| MS.gene91575.t1 | AT2G29350 | 59.184 | 196 | 80 | 0 | 10 | 205 | 9 | 204 | 1.77e-77 | 234 |
| MS.gene91575.t1 | AT2G29310 | 55.556 | 198 | 88 | 0 | 11 | 208 | 2 | 199 | 6.80e-75 | 227 |
| MS.gene91575.t1 | AT1G07440 | 58.537 | 164 | 68 | 0 | 10 | 173 | 6 | 169 | 2.48e-67 | 207 |
| MS.gene91575.t1 | AT2G29310 | 54.023 | 174 | 80 | 0 | 32 | 205 | 21 | 194 | 1.03e-60 | 191 |
| MS.gene91575.t1 | AT2G29170 | 63.542 | 96 | 34 | 1 | 8 | 102 | 7 | 102 | 3.11e-38 | 130 |
| MS.gene91575.t1 | AT3G03980 | 34.444 | 270 | 160 | 4 | 7 | 264 | 5 | 269 | 9.18e-35 | 126 |
| MS.gene91575.t1 | AT5G18210 | 34.109 | 258 | 157 | 6 | 15 | 264 | 7 | 259 | 1.36e-30 | 115 |
| MS.gene91575.t1 | AT4G13180 | 32.946 | 258 | 159 | 5 | 16 | 266 | 13 | 263 | 1.34e-28 | 110 |
| MS.gene91575.t1 | AT5G18210 | 33.077 | 260 | 148 | 7 | 15 | 266 | 7 | 248 | 7.82e-27 | 105 |
| MS.gene91575.t1 | AT4G05530 | 32.000 | 250 | 161 | 5 | 16 | 264 | 9 | 250 | 1.09e-25 | 102 |
| MS.gene91575.t1 | AT1G24360 | 32.271 | 251 | 153 | 8 | 22 | 266 | 80 | 319 | 2.90e-25 | 102 |
| MS.gene91575.t1 | AT3G04000 | 32.616 | 279 | 152 | 6 | 7 | 263 | 5 | 269 | 6.91e-25 | 100 |
| MS.gene91575.t1 | AT1G54870 | 29.183 | 257 | 165 | 7 | 16 | 263 | 84 | 332 | 1.46e-20 | 89.7 |
| MS.gene91575.t1 | AT3G05260 | 31.579 | 266 | 152 | 9 | 16 | 266 | 37 | 287 | 1.48e-20 | 89.0 |
| MS.gene91575.t1 | AT1G54870 | 29.183 | 257 | 165 | 7 | 16 | 263 | 82 | 330 | 1.61e-20 | 89.7 |
| MS.gene91575.t1 | AT3G03330 | 30.364 | 247 | 150 | 8 | 12 | 252 | 37 | 267 | 1.18e-19 | 87.0 |
| MS.gene91575.t1 | AT3G12800 | 25.379 | 264 | 171 | 6 | 16 | 264 | 10 | 262 | 1.56e-19 | 86.3 |
| MS.gene91575.t1 | AT3G55290 | 29.008 | 262 | 167 | 10 | 16 | 266 | 17 | 270 | 5.24e-18 | 82.0 |
| MS.gene91575.t1 | AT3G55290 | 29.008 | 262 | 167 | 10 | 16 | 266 | 18 | 271 | 6.49e-18 | 81.6 |
| MS.gene91575.t1 | AT3G06060 | 31.343 | 201 | 127 | 4 | 16 | 211 | 37 | 231 | 2.66e-17 | 80.5 |
| MS.gene91575.t1 | AT3G06060 | 31.343 | 201 | 127 | 4 | 16 | 211 | 54 | 248 | 3.44e-17 | 80.5 |
| MS.gene91575.t1 | AT3G55310 | 28.185 | 259 | 173 | 9 | 16 | 266 | 17 | 270 | 7.27e-17 | 78.6 |
| MS.gene91575.t1 | AT3G26760 | 29.213 | 267 | 174 | 7 | 9 | 265 | 29 | 290 | 2.90e-16 | 77.4 |
| MS.gene91575.t1 | AT1G63380 | 26.357 | 258 | 180 | 8 | 16 | 266 | 17 | 271 | 4.25e-16 | 76.6 |
| MS.gene91575.t1 | AT1G63380 | 26.357 | 258 | 180 | 8 | 16 | 266 | 19 | 273 | 4.66e-16 | 76.6 |
| MS.gene91575.t1 | AT1G63380 | 26.357 | 258 | 180 | 8 | 16 | 266 | 15 | 269 | 4.72e-16 | 76.3 |
| MS.gene91575.t1 | AT1G63380 | 26.357 | 258 | 180 | 8 | 16 | 266 | 22 | 276 | 5.60e-16 | 76.3 |
| MS.gene91575.t1 | AT1G62610 | 27.027 | 259 | 177 | 9 | 16 | 266 | 15 | 269 | 1.15e-15 | 75.5 |
| MS.gene91575.t1 | AT1G62610 | 27.027 | 259 | 177 | 9 | 16 | 266 | 19 | 273 | 1.15e-15 | 75.5 |
| MS.gene91575.t1 | AT1G62610 | 27.027 | 259 | 177 | 9 | 16 | 266 | 13 | 267 | 1.21e-15 | 75.1 |
| MS.gene91575.t1 | AT1G62610 | 27.027 | 259 | 177 | 9 | 16 | 266 | 14 | 268 | 1.24e-15 | 75.1 |
| MS.gene91575.t1 | AT3G51680 | 27.562 | 283 | 180 | 8 | 1 | 265 | 20 | 295 | 2.35e-15 | 74.7 |
| MS.gene91575.t1 | AT5G50690 | 29.319 | 191 | 124 | 6 | 16 | 201 | 45 | 229 | 4.48e-15 | 73.2 |
| MS.gene91575.t1 | AT5G50590 | 29.319 | 191 | 124 | 6 | 16 | 201 | 45 | 229 | 4.48e-15 | 73.2 |
| MS.gene91575.t1 | AT3G46170 | 28.462 | 260 | 171 | 9 | 16 | 266 | 26 | 279 | 6.70e-15 | 73.2 |
| MS.gene91575.t1 | AT5G04900 | 29.353 | 201 | 125 | 7 | 22 | 210 | 83 | 278 | 1.06e-14 | 73.2 |
| MS.gene91575.t1 | AT5G50690 | 29.319 | 191 | 124 | 6 | 16 | 201 | 45 | 229 | 1.49e-14 | 72.4 |
| MS.gene91575.t1 | AT5G50590 | 29.319 | 191 | 124 | 6 | 16 | 201 | 45 | 229 | 1.49e-14 | 72.4 |
| MS.gene91575.t1 | AT4G03140 | 27.734 | 256 | 175 | 6 | 16 | 265 | 78 | 329 | 1.65e-14 | 72.8 |
| MS.gene91575.t1 | AT3G42960 | 30.337 | 267 | 164 | 10 | 11 | 265 | 5 | 261 | 9.90e-14 | 69.7 |
| MS.gene91575.t1 | AT2G47130 | 25.882 | 255 | 178 | 7 | 16 | 266 | 6 | 253 | 1.16e-12 | 66.6 |
| MS.gene91575.t1 | AT2G17845 | 25.573 | 262 | 179 | 9 | 16 | 266 | 47 | 303 | 1.45e-12 | 67.0 |
| MS.gene91575.t1 | AT4G13250 | 24.473 | 237 | 152 | 6 | 22 | 232 | 165 | 400 | 1.71e-12 | 67.4 |
| MS.gene91575.t1 | AT3G03350 | 32.051 | 156 | 95 | 4 | 51 | 204 | 207 | 353 | 3.59e-12 | 66.2 |
| MS.gene91575.t1 | AT1G49670 | 30.631 | 222 | 137 | 9 | 18 | 224 | 6 | 225 | 2.31e-11 | 63.9 |
| MS.gene91575.t1 | AT1G49670 | 30.631 | 222 | 137 | 9 | 18 | 224 | 6 | 225 | 2.41e-11 | 63.9 |
| MS.gene91575.t1 | AT1G52340 | 29.856 | 278 | 147 | 11 | 16 | 265 | 18 | 275 | 2.44e-11 | 63.2 |
| MS.gene91575.t1 | AT5G65205 | 27.869 | 183 | 125 | 4 | 22 | 203 | 12 | 188 | 3.97e-11 | 62.4 |
| MS.gene91575.t1 | AT5G10050 | 27.869 | 183 | 125 | 4 | 22 | 203 | 11 | 187 | 4.65e-11 | 62.4 |
Find 60 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGAAGAGTTAGCAGAATT+TGG | 0.151126 | 7.1:-38412959 | MS.gene91575:CDS |
| TATAATTAAATTACCTTTAG+AGG | 0.172818 | 7.1:+38410810 | None:intergenic |
| CCATTCCAATGCTAAGTTCT+TGG | 0.203591 | 7.1:+38410662 | None:intergenic |
| CTTCTAAAACAATCTGGATA+TGG | 0.305242 | 7.1:-38410898 | MS.gene91575:CDS |
| TGGAAGAGTTAGCAGAATTT+GGG | 0.308742 | 7.1:-38412958 | MS.gene91575:CDS |
| GATCAAAGATGGTCACTAAA+AGG | 0.312455 | 7.1:-38413134 | MS.gene91575:CDS |
| GTATTATCTATGATGGGTTT+AGG | 0.353458 | 7.1:+38410994 | None:intergenic |
| TTCATCAGTATTATCTATGA+TGG | 0.366382 | 7.1:+38410987 | None:intergenic |
| AGATGATATTAACAAATGTT+TGG | 0.374991 | 7.1:-38412906 | MS.gene91575:CDS |
| GCTGCATAGACAGAATTAAA+AGG | 0.377817 | 7.1:+38410832 | None:intergenic |
| GTATTCATATCCTCAATTGC+AGG | 0.377863 | 7.1:-38410868 | MS.gene91575:CDS |
| GTTCTTGGCGCATTGATTCA+TGG | 0.382444 | 7.1:+38410677 | None:intergenic |
| GGAATGACAGCTCTAGTAAC+TGG | 0.387510 | 7.1:-38413113 | MS.gene91575:CDS |
| GGATAATGTTGTCGAGGATA+TGG | 0.392949 | 7.1:-38389784 | MS.gene91575:CDS |
| CACCCTCTTCTAAAACAATC+TGG | 0.410514 | 7.1:-38410904 | MS.gene91575:CDS |
| TTAACAAATGTTTGGAAGAG+TGG | 0.416511 | 7.1:-38412898 | MS.gene91575:CDS |
| ATGGTAACCAGACACAAAAT+TGG | 0.420948 | 7.1:+38410942 | None:intergenic |
| CACTGTTAGGTAAACAATGC+TGG | 0.424573 | 7.1:-38411027 | MS.gene91575:intron |
| GGCTTTGAGTCCTGCAATTG+AGG | 0.443018 | 7.1:+38410858 | None:intergenic |
| CGTGCTAATGTTGTGGCACC+TGG | 0.445202 | 7.1:-38410624 | MS.gene91575:CDS |
| CGCAGCATTCTCGAAAAGTA+TGG | 0.449584 | 7.1:+38410590 | None:intergenic |
| GAAGATATAACAACTACAAT+TGG | 0.449713 | 7.1:-38410967 | MS.gene91575:CDS |
| TCTGTCTATGCAGCCTCTAA+AGG | 0.465845 | 7.1:-38410823 | MS.gene91575:intron |
| ATCAATCAGGTATGCAATTG+TGG | 0.492239 | 7.1:-38412978 | MS.gene91575:intron |
| CAATTGCAGGACTCAAAGCC+TGG | 0.498348 | 7.1:-38410855 | MS.gene91575:CDS |
| ACTGGTGGAACCCGAGGCAT+AGG | 0.498705 | 7.1:-38413095 | MS.gene91575:CDS |
| CAAGAACTTAGCATTGGAAT+GGG | 0.501708 | 7.1:-38410661 | MS.gene91575:CDS |
| CCAAGAACTTAGCATTGGAA+TGG | 0.503939 | 7.1:-38410662 | MS.gene91575:CDS |
| TCATCAGTATTATCTATGAT+GGG | 0.517347 | 7.1:+38410988 | None:intergenic |
| ACCAATGCTGATATATCCTT+AGG | 0.521567 | 7.1:+38389729 | None:intergenic |
| GAGAACTGACCCTATGCCTC+GGG | 0.531174 | 7.1:+38413085 | None:intergenic |
| ACCTAAGGATATATCAGCAT+TGG | 0.534231 | 7.1:-38389730 | MS.gene91575:CDS |
| AGTATGGTCATCACAGCTCC+AGG | 0.534605 | 7.1:+38410606 | None:intergenic |
| TGGTCGGATTGGAGAACCTA+AGG | 0.554317 | 7.1:-38389745 | MS.gene91575:CDS |
| CTAACACCTAGTGGTCGGAT+TGG | 0.555165 | 7.1:-38389756 | MS.gene91575:CDS |
| CCAGTGATGTGTGATGCAGC+TGG | 0.556867 | 7.1:+38389690 | None:intergenic |
| GGTTCTCCAATCCGACCACT+AGG | 0.556909 | 7.1:+38389750 | None:intergenic |
| CCAGCTGCATCACACATCAC+TGG | 0.560488 | 7.1:-38389690 | MS.gene91575:CDS |
| TTGGAAGAGTGGAAAGGCAA+AGG | 0.565426 | 7.1:-38412887 | MS.gene91575:CDS |
| ACTGTTAGGTAAACAATGCT+GGG | 0.565713 | 7.1:-38411026 | MS.gene91575:intron |
| ATGCGCCAAGAACTTAGCAT+TGG | 0.567165 | 7.1:-38410667 | MS.gene91575:CDS |
| CTTAGCATTGGAATGGGCAA+AGG | 0.572011 | 7.1:-38410655 | MS.gene91575:CDS |
| AGAGAACTGACCCTATGCCT+CGG | 0.576626 | 7.1:+38413084 | None:intergenic |
| ACTGTTGCATCGATCTTCGA+TGG | 0.578912 | 7.1:-38412800 | MS.gene91575:CDS |
| GCAGCTTCAAAGATCAAAGA+TGG | 0.579135 | 7.1:-38413145 | MS.gene91575:CDS |
| ATAGACAGAATTAAAAGGCC+AGG | 0.582444 | 7.1:+38410837 | None:intergenic |
| TAATATTCGTGCTAATGTTG+TGG | 0.582808 | 7.1:-38410631 | MS.gene91575:CDS |
| GGACAAATTATAGCGGCAGA+TGG | 0.589481 | 7.1:-38389669 | MS.gene91575:CDS |
| CACAATGGATAATGTTGTCG+AGG | 0.592197 | 7.1:-38389790 | MS.gene91575:CDS |
| GGTGTGCAAGTTGACACAAA+TGG | 0.595523 | 7.1:+38410923 | None:intergenic |
| CAAATTATAGCGGCAGATGG+AGG | 0.597654 | 7.1:-38389666 | MS.gene91575:CDS |
| GGAAGAGTTAGCAGAATTTG+GGG | 0.609810 | 7.1:-38412957 | MS.gene91575:CDS |
| CTGGTGGAACCCGAGGCATA+GGG | 0.613722 | 7.1:-38413094 | MS.gene91575:intron |
| CTAGTAACTGGTGGAACCCG+AGG | 0.629591 | 7.1:-38413101 | MS.gene91575:CDS |
| AAATGTTTGGAAGAGTGGAA+AGG | 0.633316 | 7.1:-38412893 | MS.gene91575:CDS |
| TGTCTCTAACACCTAGTGGT+CGG | 0.659290 | 7.1:-38389761 | MS.gene91575:CDS |
| ATGACAGCTCTAGTAACTGG+TGG | 0.670365 | 7.1:-38413110 | MS.gene91575:CDS |
| ATGGTGTCTCTAACACCTAG+TGG | 0.670463 | 7.1:-38389765 | MS.gene91575:CDS |
| ATAGAAATTAACTAGCACAA+TGG | 0.691182 | 7.1:-38389805 | MS.gene91575:intron |
| CATCACTGGACAAATTATAG+CGG | 0.730575 | 7.1:-38389676 | MS.gene91575:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 38389653 | 38413186 | 38389653 | ID=MS.gene91575 |
| chr7.1 | mRNA | 38389653 | 38413186 | 38389653 | ID=MS.gene91575.t1;Parent=MS.gene91575 |
| chr7.1 | exon | 38413095 | 38413186 | 38413095 | ID=MS.gene91575.t1.exon1;Parent=MS.gene91575.t1 |
| chr7.1 | CDS | 38413095 | 38413186 | 38413095 | ID=cds.MS.gene91575.t1;Parent=MS.gene91575.t1 |
| chr7.1 | exon | 38412784 | 38412991 | 38412784 | ID=MS.gene91575.t1.exon2;Parent=MS.gene91575.t1 |
| chr7.1 | CDS | 38412784 | 38412991 | 38412784 | ID=cds.MS.gene91575.t1;Parent=MS.gene91575.t1 |
| chr7.1 | exon | 38410824 | 38411040 | 38410824 | ID=MS.gene91575.t1.exon3;Parent=MS.gene91575.t1 |
| chr7.1 | CDS | 38410824 | 38411040 | 38410824 | ID=cds.MS.gene91575.t1;Parent=MS.gene91575.t1 |
| chr7.1 | exon | 38410590 | 38410702 | 38410590 | ID=MS.gene91575.t1.exon4;Parent=MS.gene91575.t1 |
| chr7.1 | CDS | 38410590 | 38410702 | 38410590 | ID=cds.MS.gene91575.t1;Parent=MS.gene91575.t1 |
| chr7.1 | exon | 38389653 | 38389823 | 38389653 | ID=MS.gene91575.t1.exon5;Parent=MS.gene91575.t1 |
| chr7.1 | CDS | 38389653 | 38389823 | 38389653 | ID=cds.MS.gene91575.t1;Parent=MS.gene91575.t1 |
| Gene Sequence |
| Protein sequence |
